Rh2CG496600

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000114
Physical Location & Seq
Reverse (-)
66809125 .. 66812859
3735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG496600.1

Sequence Viewer

Length: 2460 bp
ATGGGGTGGCTCTTGTATTACCTTGTAACACTGCTCTTATCACATATCCTGTCATTTTGTACCTGCGAAGACAGGATAGGACCAGGGCAGTATATCAGTGGTAACCTAACTATGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTAATGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAATACATTCCCAAATACTGCATTAGTATGGGTTGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGCGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAATCTTGTCTGGTCAACTAATACATCAATATCTGCTTCTGCAACGAATCACACAACTGGATTACTAGAGGATACTGGAAACCTTGTTCTGAGCTTTAAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTTTGTTGCCCAGCATGAAGATTAGCTTGAACAAAAAGACTGGCCAACAGAGACGCATTACATCGTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTGGGTATAGATCCTAAAGTACCACTTCAGGTCATTCTCTGGAAGGAAACTACTACGTATTATAGAAGTTCTGTGCCTAGTGGCAAGGATACAGGAGCAGAGTTTCAAAATACAGGTGGAACCGCGTATTTCTTTTCATACAACTTTGATGTTGATGAGGTTTATTTTGCTTACAGTGTCTCGGATAGTTCAGTAAAATTGAGGGTCTGGTTGGATCCTACAGGGCAAATTAAACTGCTGCTGTGGCAGGGTTCTAATAAAACGTGGTTGGATATGGGGTATTTCCCTTCGGATAACTGTGATTTTTATGCTCGTTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCATCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCTAACCAATCGGCGGTGGGGGATTGGTCCAGTGGCTGCGTTACGGAAAAGGTGTTGACATGTGGTAACGGCATAGAAAGTAACTTCTCAAAGCTTGAAAGGGTGAAACTGCCGGATCATTCTGTTCTGTTAGACAATAGGAGTATGAGTGCATGTGACTCTGAATGTCGGCAGAACTGTTCTTGCACAGCTTATGCTTATCTAAATGCAACAGATGGAAGTAATACTGGGAAATGTTTGGCATGGTTCGGCGAATTACTGGATCTAGAAGAAAATAAAACTATTCCTGCAAGTGATATTCATATTCGTGTTCATAGCTCCGAACTAGGCAAGGGTCTTTCTGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTTTGCAGCAGTTGGATTGCTTACAGTAACTTTTGGCTATTTCTTATGGAAGAAAAAATTGGGAAAGAAAGGGAGGATAGCAGGAAGAATGCGTGAGAATATAAGTAATGTTAGTGGAGGAGGTGGGAAGAAGGGTACAGAATTACCACTTTTCAGTTTAAGGAGTATAGTAGCTGCTACAAACAACTTTTCTGCAAAAAATAAACTTGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGATTTTTTCCAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCGAAGAAGTCTGGGCAAGGACATCATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAGCATATCAATCTTGTAAGGCTATTGGGTTGCTGTATGGAAGAAGATGAAATGATATTGATCTATGAGTACATGTCTAATCGAAGTTTGGACAAATTTTTATTTGATCCTTTTGAAAAGACAAAGTTGGATTGGGATACACGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTACTATATATCCACAAGTACTCTAGATTGAAAATTATCCATAGAGATCTAAAAGCAAGTAATGTTTTGTTGGATGGAACAATGAACCCCAAAGTGTCTGACTTTGGAATGGCGAGAATTTTTGATATAAATCAAATTGAAGCAAATACCAACAAGGTTGTTGGGACATACGGCTACATGTCTCCTGAATATGCACTCTATGGTCATTTCTCTGAGAAGTTGGATGTATTTAGTTTTGGAGTATTGTTGTTAGAGATTATAAGTGGAAAGAAGAATGCTTCTTTTTATCGTTTTGAAAATTCACTAACACTTGCTCAATGGGTATGGGAATTATGGAAAGAAGGTAGAGGAGTGGAGATAATTGATGCATCAGTAAGGGAAATATGCCGGATTCATGAAGCTTTGAGGTGTATCCATGTTGGGCTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCGGTGATTCATATGCTAGAGGTCGATGAAGCTACATCACTTCCACCCTCCAAAGAACCTGGTTTTTCAACACGTAGGAATTCAAGTCCTGTCACCACTTATTCTAACAATGTTGTTACTATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

819

Amino Acids

91.38

Weight (kDa)

8.24

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 173 2.1e-31 D-mannose binding lectin
S_locus_glycop PF00954 229 - 316 1.1e-18 S-locus glycoprotein domain
PAN_2 PF08276 343 - 406 2.9e-14 PAN-like domain
Pkinase PF00069 508 - 775 3.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 509 - 777 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1566, 2108
Acc36I ACCTGC 1 cut(s) 71
AccI GTMKAC 1 cut(s) 187
AccII CGCG 1 cut(s) 680
AciI CCGC 4 cut(s) 678, 873, 965, 1309
AclWI GGATC 8 cut(s) 309, 527, 560, 764, 777, 1074, 1221, 1775
AcoI YGGCCR 2 cut(s) 493, 1596
AcsI RAATTY 5 cut(s) 163, 1769, 1965, 2146, 2395
AcuI CTGAAG 1 cut(s) 566
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 6 cut(s) 61, 576, 1468, 1745, 1851, 1868
AfeI AGCGCT 1 cut(s) 525
AfiI CCNNNNNNNGG 5 cut(s) 112, 542, 964, 1308, 1605
AflIII ACRYGT 4 cut(s) 1010, 1746, 2025, 2387
AjnI CCWGG 2 cut(s) 82, 2374
AjuI GAANNNNNNNTTGG 2 cut(s) 1373, 1405
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
Alw26I GTCTC 3 cut(s) 496, 739, 2034
AlwI GGATC 8 cut(s) 309, 527, 560, 764, 777, 1074, 1221, 1775
AlwNI CAGNNNCTG 1 cut(s) 987
Aor51HI AGCGCT 1 cut(s) 525
AoxI GGCC 3 cut(s) 493, 1555, 1596
ApeKI GCWGC 6 cut(s) 276, 521, 793, 987, 1337, 1505
ApoI RAATTY 5 cut(s) 163, 1769, 1965, 2146, 2395
AspLEI GCGC 1 cut(s) 526
AspS9I GGNCC 6 cut(s) 80, 129, 875, 978, 1311, 1556
AsuC2I CCSGG 2 cut(s) 258, 543
AsuHPI GGTGA 5 cut(s) 544, 911, 1066, 2332, 2401
AsuII TTCGAA 1 cut(s) 1822
AvaII GGWCC 5 cut(s) 80, 129, 875, 978, 1311
BalI TGGCCA 2 cut(s) 495, 1598
BamHI GGATCC 1 cut(s) 769
BbsI GAAGAC 1 cut(s) 75
BbvI GCAGC 6 cut(s) 288, 533, 780, 974, 1349, 1492
BccI CCATC 3 cut(s) 275, 1160, 1916
BceAI ACGGC 2 cut(s) 1036, 2035
BciT130I CCWGG 2 cut(s) 84, 2376
BciVI GTATCC 4 cut(s) 376, 637, 1804, 2270
BcnI CCSGG 2 cut(s) 258, 543
BcoDI GTCTC 3 cut(s) 496, 739, 2034
BfaI CTAG 7 cut(s) 309, 377, 633, 1217, 1277, 1872, 2333
BfmI CTRYAG 1 cut(s) 774
BfoI RGCGCY 1 cut(s) 527
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 4 cut(s) 376, 637, 1804, 2270
BglII AGATCT 1 cut(s) 1894
BisI GCNGC 6 cut(s) 277, 522, 794, 988, 1338, 1506
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 6 cut(s) 278, 523, 795, 989, 1339, 1507
BmcAI AGTACT 2 cut(s) 1851, 1868
Bme1390I CCNGG 4 cut(s) 84, 258, 543, 2376
Bme18I GGWCC 5 cut(s) 80, 129, 875, 978, 1311
BmgT120I GGNCC 6 cut(s) 80, 129, 875, 978, 1311, 1556
BmiI GGNNCC 5 cut(s) 130, 676, 771, 877, 1313
BmrFI CCNGG 4 cut(s) 84, 258, 543, 2376
BmrI ACTGGG 1 cut(s) 1188
BmsI GCATC 2 cut(s) 2203, 2225
BmuI ACTGGG 1 cut(s) 1188
BpiI GAAGAC 1 cut(s) 75
BpmI CTGGAG 2 cut(s) 1658, 2277
Bpu1102I GCTNAGC 1 cut(s) 272
Bpu14I TTCGAA 1 cut(s) 1822
BpuEI CTTGAG 1 cut(s) 1827
BpuMI CCSGG 2 cut(s) 258, 543
BsaAI YACGTR 2 cut(s) 612, 2390
BsaBI GATNNNNATC 3 cut(s) 285, 1733, 1977
BsaJI CCNNGG 4 cut(s) 83, 124, 181, 555
BsaXI ACNNNNNCTCC 2 cut(s) 1084, 1114
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 542, 964, 1308, 1605
Bse1I ACTGG 7 cut(s) 373, 391, 496, 937, 981, 1183, 1215
Bse8I GATNNNNATC 3 cut(s) 285, 1733, 1977
BseBI CCWGG 2 cut(s) 84, 2376
BseDI CCNNGG 4 cut(s) 83, 124, 181, 555
BseGI GGATG 3 cut(s) 439, 1927, 2077
BseJI GATNNNNATC 3 cut(s) 285, 1733, 1977
BseLI CCNNNNNNNGG 5 cut(s) 112, 542, 964, 1308, 1605
BseMII CTCAG 3 cut(s) 286, 392, 2052
BseNI ACTGG 7 cut(s) 373, 391, 496, 937, 981, 1183, 1215
BseRI GAGGAG 2 cut(s) 1464, 2211
BseXI GCAGC 6 cut(s) 288, 533, 780, 974, 1349, 1492
BseYI CCCAGC 1 cut(s) 461
Bsh1236I CGCG 1 cut(s) 680
BshFI GGCC 3 cut(s) 495, 1557, 1598
BsiSI CCGG 4 cut(s) 257, 543, 1064, 2236
BslFI GGGAC 3 cut(s) 142, 861, 2026
BslI CCNNNNNNNGG 5 cut(s) 112, 542, 964, 1308, 1605
BsmAI GTCTC 3 cut(s) 496, 739, 2034
BsmBI CGTCTC 1 cut(s) 496
BsmFI GGGAC 3 cut(s) 142, 861, 2026
BsmI GAATGC 2 cut(s) 1425, 2128
BsnI GGCC 3 cut(s) 495, 1557, 1598
Bsp119I TTCGAA 1 cut(s) 1822
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 4 cut(s) 678, 873, 965, 1309
BspANI GGCC 3 cut(s) 495, 1557, 1598
BspCNI CTCAG 3 cut(s) 285, 393, 2053
BspFNI CGCG 1 cut(s) 680
BspHI TCATGA 2 cut(s) 1636, 2242
BspLI GGNNCC 5 cut(s) 130, 676, 771, 877, 1313
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 8 cut(s) 309, 527, 560, 764, 777, 1074, 1221, 1775
BspT104I TTCGAA 1 cut(s) 1822
BsrI ACTGG 7 cut(s) 373, 391, 496, 937, 981, 1183, 1215
BssECI CCNNGG 4 cut(s) 83, 124, 181, 555
BssNAI GTATAC 1 cut(s) 188
BssT1I CCWWGG 3 cut(s) 124, 181, 555
Bst1107I GTATAC 1 cut(s) 188
Bst2UI CCWGG 2 cut(s) 84, 2376
Bst4CI ACNGT 4 cut(s) 731, 854, 1130, 1357
BstBAI YACGTR 2 cut(s) 612, 2390
BstBI TTCGAA 1 cut(s) 1822
BstDEI CTNAG 3 cut(s) 272, 401, 2061
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 3 cut(s) 439, 1927, 2077
BstFNI CGCG 1 cut(s) 680
BstH2I RGCGCY 1 cut(s) 527
BstHHI GCGC 1 cut(s) 526
BstMAI GTCTC 3 cut(s) 496, 739, 2034
BstMWI GCNNNNNNNGC 1 cut(s) 799
BstNI CCWGG 2 cut(s) 84, 2376
BstNSI RCATGY 4 cut(s) 1014, 1107, 1750, 2029
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 4 cut(s) 82, 256, 541, 2374
BstSFI CTRYAG 1 cut(s) 774
BstSNI TACGTA 1 cut(s) 612
BstUI CGCG 1 cut(s) 680
BstV1I GCAGC 6 cut(s) 288, 533, 780, 974, 1349, 1492
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 4 cut(s) 565, 769, 1213, 1894
BstYI RGATCY 4 cut(s) 565, 769, 1213, 1894
BstZ17I GTATAC 1 cut(s) 188
BsuI GTATCC 4 cut(s) 376, 637, 1804, 2270
BsuRI GGCC 3 cut(s) 495, 1557, 1598
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 3 cut(s) 439, 1927, 2077
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 4 cut(s) 29, 103, 736, 988
BveI ACCTGC 1 cut(s) 71
CaiI CAGNNNCTG 1 cut(s) 987
CciI TCATGA 2 cut(s) 1636, 2242
CfoI GCGC 1 cut(s) 526
Cfr13I GGNCC 6 cut(s) 80, 129, 875, 978, 1311, 1556
CseI GACGC 1 cut(s) 513
CsiI ACCWGGT 1 cut(s) 2374
Csp6I GTAC 6 cut(s) 60, 575, 1467, 1744, 1850, 1867
CviQI GTAC 6 cut(s) 60, 575, 1467, 1744, 1850, 1867
DdeI CTNAG 3 cut(s) 272, 401, 2061
DraI TTTAAA 1 cut(s) 409
DraIII CACNNNGTG 1 cut(s) 423
EaeI YGGCCR 2 cut(s) 493, 1596
Eco105I TACGTA 1 cut(s) 612
Eco130I CCWWGG 3 cut(s) 124, 181, 555
Eco47I GGWCC 5 cut(s) 80, 129, 875, 978, 1311
Eco47III AGCGCT 1 cut(s) 525
Eco57I CTGAAG 1 cut(s) 566
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 2395
EcoRII CCWGG 2 cut(s) 82, 2374
EcoT14I CCWWGG 3 cut(s) 124, 181, 555
EcoT22I ATGCAT 1 cut(s) 2218
ErhI CCWWGG 3 cut(s) 124, 181, 555
Esp3I CGTCTC 1 cut(s) 496
FalI AAGNNNNNCTT 6 cut(s) 461, 493, 539, 571, 564, 596
FaqI GGGAC 3 cut(s) 142, 861, 2026
FauNDI CATATG 1 cut(s) 2328
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 6 cut(s) 277, 522, 794, 988, 1338, 1506
FokI GGATG 3 cut(s) 426, 1934, 2084
Fsp4HI GCNGC 6 cut(s) 277, 522, 794, 988, 1338, 1506
FspBI CTAG 7 cut(s) 309, 377, 633, 1217, 1277, 1872, 2333
GlaI GCGC 1 cut(s) 525
GluI GCNGC 6 cut(s) 277, 522, 794, 988, 1338, 1506
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 2 cut(s) 1658, 2277
HaeII RGCGCY 1 cut(s) 527
HaeIII GGCC 3 cut(s) 495, 1557, 1598
HapII CCGG 4 cut(s) 257, 543, 1064, 2236
HgaI GACGC 1 cut(s) 513
HhaI GCGC 1 cut(s) 526
Hin6I GCGC 1 cut(s) 524
HinP1I GCGC 1 cut(s) 524
HincII GTYRAC 2 cut(s) 327, 1008
HindII GTYRAC 2 cut(s) 327, 1008
HindIII AAGCTT 2 cut(s) 1043, 2247
HinfI GANTC 7 cut(s) 192, 239, 251, 358, 1109, 2239, 2323
HpaII CCGG 4 cut(s) 257, 543, 1064, 2236
HphI GGTGA 5 cut(s) 544, 911, 1066, 2332, 2401
Hpy166II GTNNAC 5 cut(s) 188, 327, 552, 902, 1008
Hpy188I TCNGA 9 cut(s) 306, 402, 448, 739, 847, 1114, 1273, 1948, 2062
Hpy8I GTNNAC 5 cut(s) 188, 327, 552, 902, 1008
HpyAV CCTTC 4 cut(s) 592, 852, 1456, 2183
HpyCH4III ACNGT 4 cut(s) 731, 854, 1130, 1357
HpyCH4IV ACGT 3 cut(s) 611, 818, 2389
HpyF10VI GCNNNNNNNGC 1 cut(s) 799
HpyF3I CTNAG 3 cut(s) 272, 401, 2061
HpySE526I ACGT 3 cut(s) 611, 818, 2389
HspAI GCGC 1 cut(s) 524
LmnI GCTCC 3 cut(s) 650, 1274, 2296
Lsp1109I GCAGC 6 cut(s) 288, 533, 780, 974, 1349, 1492
LweI GCATC 2 cut(s) 2203, 2225
MabI ACCWGGT 1 cut(s) 2374
MaeI CTAG 7 cut(s) 309, 377, 633, 1217, 1277, 1872, 2333
MaeII ACGT 3 cut(s) 611, 818, 2389
MflI RGATCY 4 cut(s) 565, 769, 1213, 1894
MlsI TGGCCA 2 cut(s) 495, 1598
MluNI TGGCCA 2 cut(s) 495, 1598
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 7 cut(s) 279, 747, 804, 1324, 1782, 1899, 2049
Mox20I TGGCCA 2 cut(s) 495, 1598
Mph1103I ATGCAT 1 cut(s) 2218
MscI TGGCCA 2 cut(s) 495, 1598
MseI TTAA 4 cut(s) 408, 786, 1296, 1490
MslI CAYNNNNRTG 4 cut(s) 220, 916, 922, 1257
Msp20I TGGCCA 2 cut(s) 495, 1598
MspA1I CMGCKG 1 cut(s) 2297
MspI CCGG 4 cut(s) 257, 543, 1064, 2236
MspR9I CCNGG 4 cut(s) 84, 258, 543, 2376
Mva1269I GAATGC 2 cut(s) 1425, 2128
MvaI CCWGG 2 cut(s) 84, 2376
MvnI CGCG 1 cut(s) 680
MwoI GCNNNNNNNGC 1 cut(s) 799
NciI CCSGG 2 cut(s) 258, 543
NdeI CATATG 1 cut(s) 2328
NlaIV GGNNCC 5 cut(s) 130, 676, 771, 877, 1313
NmuCI GTSAC 3 cut(s) 415, 1106, 2407
NsiI ATGCAT 1 cut(s) 2218
NspI RCATGY 4 cut(s) 1014, 1107, 1750, 2029
NspV TTCGAA 1 cut(s) 1822
PagI TCATGA 2 cut(s) 1636, 2242
PciI ACATGT 3 cut(s) 1010, 1746, 2025
PctI GAATGC 2 cut(s) 1425, 2128
PfeI GAWTC 6 cut(s) 192, 239, 251, 358, 2239, 2323
PkrI GCNGC 6 cut(s) 278, 523, 795, 989, 1339, 1507
PleI GAGTC 1 cut(s) 1103
PpsI GAGTC 1 cut(s) 1103
Ppu21I YACGTR 2 cut(s) 612, 2390
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 3 cut(s) 1010, 1746, 2025
PsiI TTATAA 2 cut(s) 1566, 2108
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 2 cut(s) 82, 2374
PspEI GGTNACC 1 cut(s) 101
PspFI CCCAGC 1 cut(s) 461
PspGI CCWGG 2 cut(s) 82, 2374
PspN4I GGNNCC 5 cut(s) 130, 676, 771, 877, 1313
PspPI GGNCC 6 cut(s) 80, 129, 875, 978, 1311, 1556
PspPPI RGGWCCY 1 cut(s) 129
PstNI CAGNNNCTG 1 cut(s) 987
PsuI RGATCY 4 cut(s) 565, 769, 1213, 1894
PvuII CAGCTG 1 cut(s) 2297
RsaI GTAC 6 cut(s) 61, 576, 1468, 1745, 1851, 1868
RsaNI GTAC 6 cut(s) 60, 575, 1467, 1744, 1850, 1867
RseI CAYNNNNRTG 4 cut(s) 220, 916, 922, 1257
SaqAI TTAA 4 cut(s) 408, 786, 1296, 1490
SatI GCNGC 6 cut(s) 277, 522, 794, 988, 1338, 1506
Sau96I GGNCC 6 cut(s) 80, 129, 875, 978, 1311, 1556
ScaI AGTACT 2 cut(s) 1851, 1868
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 4 cut(s) 84, 258, 543, 2376
SexAI ACCWGGT 1 cut(s) 2374
SfaNI GCATC 2 cut(s) 2203, 2225
SfcI CTRYAG 1 cut(s) 774
SfuI TTCGAA 1 cut(s) 1822
SinI GGWCC 5 cut(s) 80, 129, 875, 978, 1311
SmiMI CAYNNNNRTG 4 cut(s) 220, 916, 922, 1257
SmlI CTYRAG 1 cut(s) 1842
SmoI CTYRAG 1 cut(s) 1842
SnaBI TACGTA 1 cut(s) 612
SsiI CCGC 4 cut(s) 678, 873, 965, 1309
SspMI CTAG 7 cut(s) 309, 377, 633, 1217, 1277, 1872, 2333
StyD4I CCNGG 4 cut(s) 82, 256, 541, 2374
StyI CCWWGG 3 cut(s) 124, 181, 555
TaaI ACNGT 4 cut(s) 731, 854, 1130, 1357
TaiI ACGT 3 cut(s) 614, 821, 2392
TaqI TCGA 7 cut(s) 435, 1613, 1756, 1822, 2302, 2340, 2455
TatI WGTACW 3 cut(s) 1743, 1849, 1866
TfiI GAWTC 6 cut(s) 192, 239, 251, 358, 2239, 2323
Tru1I TTAA 4 cut(s) 408, 786, 1296, 1490
Tru9I TTAA 4 cut(s) 408, 786, 1296, 1490
TscAI CASTG 4 cut(s) 36, 103, 736, 988
TseFI GTSAC 3 cut(s) 415, 1106, 2407
TseI GCWGC 6 cut(s) 276, 521, 793, 987, 1337, 1505
Tsp45I GTSAC 3 cut(s) 415, 1106, 2407
TspGWI ACGGA 1 cut(s) 1010
TspRI CASTG 4 cut(s) 36, 103, 736, 988
VpaK11BI GGWCC 5 cut(s) 80, 129, 875, 978, 1311
XapI RAATTY 5 cut(s) 163, 1769, 1965, 2146, 2395
XbaI TCTAGA 2 cut(s) 1216, 1871
XceI RCATGY 4 cut(s) 1014, 1107, 1750, 2029
XmiI GTMKAC 1 cut(s) 187
XspI CTAG 7 cut(s) 309, 377, 633, 1217, 1277, 1872, 2333
ZrmI AGTACT 2 cut(s) 1851, 1868
Zsp2I ATGCAT 1 cut(s) 2218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.