RLG00000021283

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000114
Physical Location & Seq
Forward (+)
73745601 .. 73748992
3392 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021283

Sequence Viewer

Length: 2349 bp
ATGGGGTGGCTCTTCCCTTACCTTGTTATACTGCTTCCCTCTCTGATCTTTTCATTCTGTACCAGCCAAGACAACTTATTACCGGGGAAATCTATCAGTGCAAACCAGACCTTGATTTCTTCCAATGGGACCTTTGCCTTAGGCTTCTTCAGTCCTGAAAATTCTACTAAATACTTCCTTGGTATATGGTACGACAAACTCCCAAAGTCGACAGTAGTTTGGGTTGCTAACAGAGAATCCCCGCTTGATTCTCCGGGTGTTTTTACACTTGGTGCTGATGGAAATCTTGTGGTGTTGTTAGACGTCGAAGCGAGCGCTCCAGTCTGGTCAACTAATTTAGTATTGGATGCTGCAAAGAATGGCACAACTGGTTTACTAACCGATACTGGAAACCTTGTTCTGAGATCTGGGGAAGAAACTTTGTGGGAGAGCTTCGATCATCCCTCTGATACAATTCTGCCTGGCATGAAGATTGGCTTGAACAAACAAACTGGCCAACAAAGCTGCCTCACATCCTGGGCAACGCTTGATGATCCACGACCCGGAAAGTTCACCTTATGCATTGATCCTAAAGGGCGGCAGGCTTATATATGGGAGGATAACAGTATTCAAAAATGGAGAATTGCTATGTACATTGGCAGAGACACAACAAGTGTCTTTGGAAATCCAGGTGGCTCAACCTTTTCCCTATCATACAACTTCGATGTTGATAAGGCTTATCTTACTTACAGTGTCTCGAATAGCTCACTGAAAATGAGGGTCTTGTTGAATCCTTCAGGGCAGATTGAGCTGCTGCTGTGGATCAGTAAAACTTGGTATCAACTGTGGAAGGCACCTGCTGATAACTGTGATTTTTATGATCGTTGCGGTCCATATGGTGCCTGTCGTAAAAATGAAAGCCTCTCATCACCGTGCAAGTGCTTGACAGGTTTTAAAGCCAAATTTTCAAACCAATGGGATATGCAGGATTGGTCCAGTGGCTGCGTTAGGGAAAAAGCATTGACATGTAGTAACGCAATGGAAGGGTACTTCTCAAAGTTAGAACGGGTGAAACTACCAGATCATTCTGATATTTTTGAGGATAAGAGCGAGGATGAGTGCAACTCTGAATGTCATCAGAGTTGTTCTTGCACGGCTTATGCTTATGTAAATGCGACGGAAGGAAGTAATACTGGGACATGTATGCAATGGTTTGGTGACTTAATCGATCTAGTAGAGGATTATGATATTATTACTACACATGATATTTTCATTCGCGTTCATGACTCCAAACTAGGTAGCAAGGGTCTCTTTCATGGTTCCTCGAAGAGCTCCATAGTAATTGCAATAGTCTCAGCTGCAGCTGGATTGCTTACAATAACTTTTGGTTGTTTCTTGTGGAAGAATTTGGGAAAGGAAGGTACACACTCCTATCTCATGTGGGGTTTTCCTCTGTTTTCTTCCTTCTACGTGCTACAGGGAATTTTGCCAGAAAATCAAGAAGTGGCCGTAAAGAGGCTGTCAAAGAAGTCTGGGCAAGGACATCATGAGTTCATGAATGAGTTGAAGCTTATAGCCAAACTCCAGCATACAAATCTTGTTAGGCTCTTGGGTTGCTGTATGGAACAAGAGGAAATGATATTGATCTATGAGTACATGCCTAATCGAAGTTTGGACAAGTTTTTGTTTGATTCATTTGAGAAGACAGACTTGGACTGGGTTACACGCTTTCGAATCATACAAGGTGTTGCTCAAGGGGTACTTTATATCCACAAATTTTCTAGATTGAAAATTATTCACAGGGATCTAAAAGCAAGTAATGTGTTGTTGGATGCAAAGATGAACCCCAAAGTTTCAGACTTTGGAATGGCAAGAATTTTCGAGACGAATCAAATTGAAGCAAATACCAATAGGATTGTTGGGACATACGGCTACATGTCACCTGAGTATGCATTTTATGGCTATTTCTCTGAAAAATTGGACGTATTTAGTTTTGGGGTATTGTTGTTGGAGATTGTAAGTGGAAAGAGAAATGCTTCTTTTTATCATTTTGAAAATTCACTAACGCTTGCTCGATGGGTATGGGAATTGTGGAAAGAAGGCAGATCAGTGGAGGTGATTGACGCATCAGTAAGGGAAAGTTGCCGGACTCATGAAGCTTTGAGGTGTATCCATGTGGGGCTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCCGTAATTCATATGCTTGAGGCCGATGAAGCTACTTCACTTCCACCCTCCAAAGAACCTGCTTTTTCAACACGTACGAATTCAAGTCTTGTTACCACTTATTCCAACAATGCAGTCACTATTACTTTGCCAGAGGCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

783

Amino Acids

87.79

Weight (kDa)

5.75

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 173 1.4e-29 D-mannose binding lectin
S_locus_glycop PF00954 226 - 314 5.1e-20 S-locus glycoprotein domain
PAN_2 PF08276 341 - 404 6.7e-14 PAN-like domain
Pkinase PF00069 490 - 739 1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 491 - 740 3.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 844
AatII GACGTC 1 cut(s) 306
Acc36I ACCTGC 2 cut(s) 844, 2272
AccB1I GGYRCC 2 cut(s) 832, 878
AccI GTMKAC 1 cut(s) 209
AccII CGCG 1 cut(s) 1257
AciI CCGC 3 cut(s) 242, 577, 867
AclWI GGATC 4 cut(s) 527, 560, 809, 1791
AcoI YGGCCR 2 cut(s) 493, 1485
AcsI RAATTY 8 cut(s) 160, 941, 1384, 1461, 1754, 1854, 2035, 2284
AcuI CTGAAG 2 cut(s) 133, 759
AcyI GRCGYC 1 cut(s) 303
AdeI CACNNNGTG 1 cut(s) 272
AfaI GTAC 8 cut(s) 61, 191, 632, 1028, 1402, 1634, 1740, 2281
AfeI AGCGCT 1 cut(s) 316
AfiI CCNNNNNNNGG 2 cut(s) 542, 1494
AflIII ACRYGT 4 cut(s) 1004, 1178, 1914, 2276
AjnI CCWGG 3 cut(s) 460, 515, 667
AjuI GAANNNNNNNTTGG 2 cut(s) 1673, 1705
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
Alw21I GWGCWC 1 cut(s) 1313
Alw26I GTCTC 5 cut(s) 636, 739, 1292, 1336, 1856
AlwI GGATC 4 cut(s) 527, 560, 809, 1791
AlwNI CAGNNNCTG 1 cut(s) 981
Aor51HI AGCGCT 1 cut(s) 316
AoxI GGCC 3 cut(s) 493, 1485, 2226
ApeKI GCWGC 7 cut(s) 350, 504, 790, 793, 981, 1337, 1340
ApoI RAATTY 8 cut(s) 160, 941, 1384, 1461, 1754, 1854, 2035, 2284
Asp700I GAANNNNTTC 1 cut(s) 2014
AspLEI GCGC 1 cut(s) 317
AspS9I GGNCC 3 cut(s) 129, 869, 972
AsuC2I CCSGG 3 cut(s) 84, 255, 543
AsuHPI GGTGA 6 cut(s) 544, 900, 1060, 1208, 1911, 2107
AsuII TTCGAA 1 cut(s) 1711
AvaII GGWCC 3 cut(s) 129, 869, 972
AxyI CCTNAGG 1 cut(s) 139
BalI TGGCCA 1 cut(s) 495
BanI GGYRCC 2 cut(s) 832, 878
BanII GRGCYC 1 cut(s) 1313
BbsI GAAGAC 1 cut(s) 1688
Bbv12I GWGCWC 1 cut(s) 1313
BbvI GCAGC 7 cut(s) 337, 491, 777, 780, 968, 1324, 1352
BccI CCATC 2 cut(s) 272, 2049
BceAI ACGGC 3 cut(s) 1149, 1472, 1924
BciT130I CCWGG 3 cut(s) 462, 517, 669
BciVI GTATCC 1 cut(s) 2159
BcnI CCSGG 3 cut(s) 84, 255, 543
BcoDI GTCTC 5 cut(s) 636, 739, 1292, 1336, 1856
BfaI CTAG 3 cut(s) 1211, 1274, 1761
BfmI CTRYAG 2 cut(s) 1338, 1454
BfoI RGCGCY 1 cut(s) 318
BfuAI ACCTGC 2 cut(s) 844, 2272
BfuI GTATCC 1 cut(s) 2159
BglII AGATCT 1 cut(s) 404
BisI GCNGC 8 cut(s) 351, 505, 578, 791, 794, 982, 1338, 1341
BlsI GCNGC 8 cut(s) 352, 506, 579, 792, 795, 983, 1339, 1342
Bme1390I CCNGG 6 cut(s) 84, 255, 462, 517, 543, 669
Bme18I GGWCC 3 cut(s) 129, 869, 972
BmgT120I GGNCC 3 cut(s) 129, 869, 972
BmiI GGNNCC 4 cut(s) 130, 834, 880, 1300
BmrFI CCNGG 6 cut(s) 84, 255, 462, 517, 543, 669
BmrI ACTGGG 2 cut(s) 1182, 1705
BmsI GCATC 3 cut(s) 337, 1801, 2114
BmuI ACTGGG 2 cut(s) 1182, 1705
BpiI GAAGAC 1 cut(s) 1688
BplI GAGNNNNNCTC 2 cut(s) 1088, 1120
BpmI CTGGAG 3 cut(s) 303, 1547, 2166
Bpu14I TTCGAA 1 cut(s) 1711
BpuEI CTTGAG 2 cut(s) 1716, 2243
BpuMI CCSGG 3 cut(s) 84, 255, 543
Bsa29I ATCGAT 1 cut(s) 1206
BsaAI YACGTR 2 cut(s) 1450, 2279
BsaBI GATNNNNATC 2 cut(s) 282, 1622
BsaHI GRCGYC 1 cut(s) 303
BsaI GGTCTC 1 cut(s) 1292
BsaJI CCNNGG 3 cut(s) 83, 178, 516
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 1494
Bse1I ACTGG 7 cut(s) 320, 373, 391, 496, 975, 1177, 1700
Bse21I CCTNAGG 1 cut(s) 139
Bse3DI GCAATG 2 cut(s) 1023, 1193
Bse8I GATNNNNATC 2 cut(s) 282, 1622
BseBI CCWGG 3 cut(s) 462, 517, 669
BseCI ATCGAT 1 cut(s) 1206
BseDI CCNNGG 3 cut(s) 83, 178, 516
BseGI GGATG 6 cut(s) 352, 439, 512, 1099, 1816, 2204
BseJI GATNNNNATC 2 cut(s) 282, 1622
BseLI CCNNNNNNNGG 2 cut(s) 542, 1494
BseMI GCAATG 2 cut(s) 1023, 1193
BseMII CTCAG 3 cut(s) 392, 1347, 1914
BseNI ACTGG 7 cut(s) 320, 373, 391, 496, 975, 1177, 1700
BseXI GCAGC 7 cut(s) 337, 491, 777, 780, 968, 1324, 1352
Bsh1236I CGCG 1 cut(s) 1257
BshFI GGCC 3 cut(s) 495, 1487, 2228
BshNI GGYRCC 2 cut(s) 832, 878
BshVI ATCGAT 1 cut(s) 1206
BsiHKAI GWGCWC 1 cut(s) 1313
BsiSI CCGG 4 cut(s) 83, 254, 543, 2125
BsiWI CGTACG 1 cut(s) 2279
BslFI GGGAC 3 cut(s) 142, 1189, 1915
BslI CCNNNNNNNGG 2 cut(s) 542, 1494
BsmAI GTCTC 5 cut(s) 636, 739, 1292, 1336, 1856
BsmBI CGTCTC 1 cut(s) 1856
BsmFI GGGAC 3 cut(s) 142, 1189, 1915
BsnI GGCC 3 cut(s) 495, 1487, 2228
Bso31I GGTCTC 1 cut(s) 1292
Bsp119I TTCGAA 1 cut(s) 1711
Bsp1286I GDGCHC 1 cut(s) 1313
Bsp1407I TGTACA 1 cut(s) 630
BspACI CCGC 3 cut(s) 242, 577, 867
BspANI GGCC 3 cut(s) 495, 1487, 2228
BspCNI CTCAG 3 cut(s) 393, 1346, 1915
BspDI ATCGAT 1 cut(s) 1206
BspFNI CGCG 1 cut(s) 1257
BspHI TCATGA 4 cut(s) 1261, 1525, 1533, 2131
BspLI GGNNCC 4 cut(s) 130, 834, 880, 1300
BspMAI CTGCAG 1 cut(s) 1342
BspMI ACCTGC 2 cut(s) 844, 2272
BspPI GGATC 4 cut(s) 527, 560, 809, 1791
BspQI GCTCTTC 2 cut(s) 17, 1301
BspT104I TTCGAA 1 cut(s) 1711
BspT107I GGYRCC 2 cut(s) 832, 878
BspTNI GGTCTC 1 cut(s) 1292
BsrDI GCAATG 2 cut(s) 1023, 1193
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 7 cut(s) 320, 373, 391, 496, 975, 1177, 1700
BssECI CCNNGG 3 cut(s) 83, 178, 516
BssNI GRCGYC 1 cut(s) 303
BssT1I CCWWGG 1 cut(s) 178
Bst2UI CCWGG 3 cut(s) 462, 517, 669
Bst4CI ACNGT 6 cut(s) 214, 605, 731, 825, 848, 912
Bst6I CTCTTC 2 cut(s) 17, 1301
BstACI GRCGYC 1 cut(s) 303
BstAUI TGTACA 1 cut(s) 630
BstBAI YACGTR 2 cut(s) 1450, 2279
BstBI TTCGAA 1 cut(s) 1711
BstC8I GCNNGC 3 cut(s) 313, 582, 2049
BstDEI CTNAG 4 cut(s) 139, 401, 1333, 1923
BstF5I GGATG 6 cut(s) 352, 439, 512, 1099, 1816, 2204
BstFNI CGCG 1 cut(s) 1257
BstH2I RGCGCY 1 cut(s) 318
BstHHI GCGC 1 cut(s) 317
BstMAI GTCTC 5 cut(s) 636, 739, 1292, 1336, 1856
BstMWI GCNNNNNNNGC 3 cut(s) 501, 787, 2234
BstNI CCWGG 3 cut(s) 462, 517, 669
BstNSI RCATGY 4 cut(s) 1008, 1182, 1639, 1918
BstSCI CCNGG 6 cut(s) 82, 253, 460, 515, 541, 667
BstSFI CTRYAG 2 cut(s) 1338, 1454
BstUI CGCG 1 cut(s) 1257
BstV1I GCAGC 7 cut(s) 337, 491, 777, 780, 968, 1324, 1352
BstV2I GAAGAC 1 cut(s) 1688
BstX2I RGATCY 2 cut(s) 404, 1783
BstYI RGATCY 2 cut(s) 404, 1783
Bsu15I ATCGAT 1 cut(s) 1206
Bsu36I CCTNAGG 1 cut(s) 139
BsuI GTATCC 1 cut(s) 2159
BsuRI GGCC 3 cut(s) 495, 1487, 2228
BsuTUI ATCGAT 1 cut(s) 1206
BtsCI GGATG 6 cut(s) 352, 439, 512, 1099, 1816, 2204
BtsIMutI CAGTG 5 cut(s) 103, 736, 746, 982, 2094
BveI ACCTGC 2 cut(s) 844, 2272
Cac8I GCNNGC 3 cut(s) 313, 582, 2049
CaiI CAGNNNCTG 1 cut(s) 981
CciI TCATGA 4 cut(s) 1261, 1525, 1533, 2131
CfoI GCGC 1 cut(s) 317
Cfr13I GGNCC 3 cut(s) 129, 869, 972
ClaI ATCGAT 1 cut(s) 1206
CseI GACGC 1 cut(s) 2111
Csp6I GTAC 8 cut(s) 60, 190, 631, 1027, 1401, 1633, 1739, 2280
CviQI GTAC 8 cut(s) 60, 190, 631, 1027, 1401, 1633, 1739, 2280
DdeI CTNAG 4 cut(s) 139, 401, 1333, 1923
DraI TTTAAA 1 cut(s) 934
DraIII CACNNNGTG 1 cut(s) 272
EaeI YGGCCR 2 cut(s) 493, 1485
Eam1104I CTCTTC 2 cut(s) 17, 1301
EarI CTCTTC 2 cut(s) 17, 1301
Ecl136II GAGCTC 1 cut(s) 1311
Eco130I CCWWGG 1 cut(s) 178
Eco24I GRGCYC 1 cut(s) 1313
Eco31I GGTCTC 1 cut(s) 1292
Eco47I GGWCC 3 cut(s) 129, 869, 972
Eco47III AGCGCT 1 cut(s) 316
Eco53kI GAGCTC 1 cut(s) 1311
Eco57I CTGAAG 2 cut(s) 133, 759
Eco81I CCTNAGG 1 cut(s) 139
EcoICRI GAGCTC 1 cut(s) 1311
EcoO109I RGGNCCY 1 cut(s) 129
EcoRI GAATTC 1 cut(s) 2284
EcoRII CCWGG 3 cut(s) 460, 515, 667
EcoT14I CCWWGG 1 cut(s) 178
EcoT22I ATGCAT 2 cut(s) 563, 1933
EcoT38I GRGCYC 1 cut(s) 1313
ErhI CCWWGG 1 cut(s) 178
Esp3I CGTCTC 1 cut(s) 1856
FaqI GGGAC 3 cut(s) 142, 1189, 1915
FauI CCCGC 1 cut(s) 249
FauNDI CATATG 2 cut(s) 874, 2217
FblI GTMKAC 1 cut(s) 209
Fnu4HI GCNGC 8 cut(s) 351, 505, 578, 791, 794, 982, 1338, 1341
FokI GGATG 6 cut(s) 359, 426, 499, 1106, 1823, 2191
FriOI GRGCYC 1 cut(s) 1313
Fsp4HI GCNGC 8 cut(s) 351, 505, 578, 791, 794, 982, 1338, 1341
FspBI CTAG 3 cut(s) 1211, 1274, 1761
GlaI GCGC 1 cut(s) 316
GluI GCNGC 8 cut(s) 351, 505, 578, 791, 794, 982, 1338, 1341
GsuI CTGGAG 3 cut(s) 303, 1547, 2166
HaeII RGCGCY 1 cut(s) 318
HaeIII GGCC 3 cut(s) 495, 1487, 2228
HapII CCGG 4 cut(s) 83, 254, 543, 2125
HgaI GACGC 1 cut(s) 2111
HhaI GCGC 1 cut(s) 317
Hin1I GRCGYC 1 cut(s) 303
Hin6I GCGC 1 cut(s) 315
HinP1I GCGC 1 cut(s) 315
HincII GTYRAC 2 cut(s) 210, 330
HindII GTYRAC 2 cut(s) 210, 330
HindIII AAGCTT 2 cut(s) 1547, 2136
HinfI GANTC 8 cut(s) 236, 248, 769, 1265, 1670, 1713, 1867, 2128
HpaII CCGG 4 cut(s) 83, 254, 543, 2125
HphI GGTGA 6 cut(s) 544, 900, 1060, 1208, 1911, 2107
Hpy166II GTNNAC 5 cut(s) 210, 330, 374, 552, 1403
Hpy188I TCNGA 8 cut(s) 45, 402, 448, 1069, 1108, 1119, 1837, 1951
Hpy8I GTNNAC 5 cut(s) 210, 330, 374, 552, 1403
Hpy99I CGWCG 2 cut(s) 308, 1159
HpyAV CCTTC 7 cut(s) 783, 823, 1016, 1154, 1391, 1453, 2072
HpyCH4III ACNGT 6 cut(s) 214, 605, 731, 825, 848, 912
HpyCH4IV ACGT 4 cut(s) 303, 1449, 1962, 2278
HpyF10VI GCNNNNNNNGC 3 cut(s) 501, 787, 2234
HpyF3I CTNAG 4 cut(s) 139, 401, 1333, 1923
HpySE526I ACGT 4 cut(s) 303, 1449, 1962, 2278
Hsp92I GRCGYC 1 cut(s) 303
HspAI GCGC 1 cut(s) 315
LguI GCTCTTC 2 cut(s) 17, 1301
LmnI GCTCC 3 cut(s) 322, 1316, 2185
Lsp1109I GCAGC 7 cut(s) 337, 491, 777, 780, 968, 1324, 1352
LweI GCATC 3 cut(s) 337, 1801, 2114
MaeI CTAG 3 cut(s) 1211, 1274, 1761
MaeII ACGT 4 cut(s) 303, 1449, 1962, 2278
MaeIII GTNAC 6 cut(s) 1010, 1196, 1699, 1917, 2296, 2320
MboII GAAGA 9 cut(s) 4, 111, 139, 425, 481, 1318, 1393, 1431, 1693
MflI RGATCY 2 cut(s) 404, 1783
MhlI GDGCHC 1 cut(s) 1313
MlsI TGGCCA 1 cut(s) 495
MluNI TGGCCA 1 cut(s) 495
MlyI GAGTC 2 cut(s) 1259, 2122
MmeI TCCRAC 3 cut(s) 1788, 1968, 2334
Mox20I TGGCCA 1 cut(s) 495
Mph1103I ATGCAT 2 cut(s) 563, 1933
MroXI GAANNNNTTC 1 cut(s) 2014
MscI TGGCCA 1 cut(s) 495
MseI TTAA 2 cut(s) 933, 1202
MslI CAYNNNNRTG 2 cut(s) 910, 1003
Msp20I TGGCCA 1 cut(s) 495
MspA1I CMGCKG 3 cut(s) 1337, 1343, 2186
MspI CCGG 4 cut(s) 83, 254, 543, 2125
MspR9I CCNGG 6 cut(s) 84, 255, 462, 517, 543, 669
MvaI CCWGG 3 cut(s) 462, 517, 669
MvnI CGCG 1 cut(s) 1257
MwoI GCNNNNNNNGC 3 cut(s) 501, 787, 2234
NciI CCSGG 3 cut(s) 84, 255, 543
NdeI CATATG 2 cut(s) 874, 2217
NlaIV GGNNCC 4 cut(s) 130, 834, 880, 1300
NmuCI GTSAC 3 cut(s) 1196, 1917, 2320
NsiI ATGCAT 2 cut(s) 563, 1933
NspI RCATGY 4 cut(s) 1008, 1182, 1639, 1918
NspV TTCGAA 1 cut(s) 1711
PagI TCATGA 4 cut(s) 1261, 1525, 1533, 2131
PaqCI CACCTGC 1 cut(s) 844
PciI ACATGT 3 cut(s) 1004, 1178, 1914
PciSI GCTCTTC 2 cut(s) 17, 1301
PdmI GAANNNNTTC 1 cut(s) 2014
PfeI GAWTC 6 cut(s) 236, 248, 769, 1670, 1713, 1867
Pfl23II CGTACG 1 cut(s) 2279
PkrI GCNGC 8 cut(s) 352, 506, 579, 792, 795, 983, 1339, 1342
PleI GAGTC 2 cut(s) 1259, 2122
PpsI GAGTC 2 cut(s) 1259, 2122
Ppu21I YACGTR 2 cut(s) 1450, 2279
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 3 cut(s) 1004, 1178, 1914
Psp124BI GAGCTC 1 cut(s) 1313
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 3 cut(s) 460, 515, 667
PspGI CCWGG 3 cut(s) 460, 515, 667
PspLI CGTACG 1 cut(s) 2279
PspN4I GGNNCC 4 cut(s) 130, 834, 880, 1300
PspPI GGNCC 3 cut(s) 129, 869, 972
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 1 cut(s) 1342
PstNI CAGNNNCTG 1 cut(s) 981
PsuI RGATCY 2 cut(s) 404, 1783
PvuII CAGCTG 3 cut(s) 1337, 1343, 2186
RsaI GTAC 8 cut(s) 61, 191, 632, 1028, 1402, 1634, 1740, 2281
RsaNI GTAC 8 cut(s) 60, 190, 631, 1027, 1401, 1633, 1739, 2280
RseI CAYNNNNRTG 2 cut(s) 910, 1003
SacI GAGCTC 1 cut(s) 1313
SalI GTCGAC 1 cut(s) 208
SapI GCTCTTC 2 cut(s) 17, 1301
SaqAI TTAA 2 cut(s) 933, 1202
SatI GCNGC 8 cut(s) 351, 505, 578, 791, 794, 982, 1338, 1341
Sau96I GGNCC 3 cut(s) 129, 869, 972
SchI GAGTC 2 cut(s) 1259, 2122
ScrFI CCNGG 6 cut(s) 84, 255, 462, 517, 543, 669
SduI GDGCHC 1 cut(s) 1313
SfaNI GCATC 3 cut(s) 337, 1801, 2114
SfcI CTRYAG 2 cut(s) 1338, 1454
SfuI TTCGAA 1 cut(s) 1711
SinI GGWCC 3 cut(s) 129, 869, 972
SmiMI CAYNNNNRTG 2 cut(s) 910, 1003
SmlI CTYRAG 2 cut(s) 1731, 2222
SmoI CTYRAG 2 cut(s) 1731, 2222
SsiI CCGC 3 cut(s) 242, 577, 867
SspMI CTAG 3 cut(s) 1211, 1274, 1761
SstI GAGCTC 1 cut(s) 1313
StyD4I CCNGG 6 cut(s) 82, 253, 460, 515, 541, 667
StyI CCWWGG 1 cut(s) 178
TaaI ACNGT 6 cut(s) 214, 605, 731, 825, 848, 912
TaiI ACGT 4 cut(s) 306, 1452, 1965, 2281
TatI WGTACW 2 cut(s) 630, 1632
TauI GCSGC 1 cut(s) 580
TfiI GAWTC 6 cut(s) 236, 248, 769, 1670, 1713, 1867
Tru1I TTAA 2 cut(s) 933, 1202
Tru9I TTAA 2 cut(s) 933, 1202
TscAI CASTG 5 cut(s) 103, 736, 753, 982, 2094
TseFI GTSAC 3 cut(s) 1196, 1917, 2320
TseI GCWGC 7 cut(s) 350, 504, 790, 793, 981, 1337, 1340
Tsp45I GTSAC 3 cut(s) 1196, 1917, 2320
TspGWI ACGGA 2 cut(s) 1172, 2197
TspRI CASTG 5 cut(s) 103, 736, 753, 982, 2094
VpaK11BI GGWCC 3 cut(s) 129, 869, 972
XapI RAATTY 8 cut(s) 160, 941, 1384, 1461, 1754, 1854, 2035, 2284
XbaI TCTAGA 1 cut(s) 1760
XceI RCATGY 4 cut(s) 1008, 1182, 1639, 1918
XmiI GTMKAC 1 cut(s) 209
XmnI GAANNNNTTC 1 cut(s) 2014
XspI CTAG 3 cut(s) 1211, 1274, 1761
ZraI GACGTC 1 cut(s) 304
Zsp2I ATGCAT 2 cut(s) 563, 1933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.