zinc finger protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ANAPC5 | PF12862 | 321 - 422 | 3e-21 | Anaphase-promoting complex subunit 5 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 489 |
| Acc36I | ACCTGC | 1 cut(s) | 826 |
| AccB1I | GGYRCC | 2 cut(s) | 523, 940 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1776 |
| AccII | CGCG | 1 cut(s) | 83 |
| AccIII | TCCGGA | 1 cut(s) | 346 |
| AciI | CCGC | 9 cut(s) | 44, 86, 123, 139, 415, 716, 1187, 1241, 1572 |
| AcoI | YGGCCR | 3 cut(s) | 3, 91, 1242 |
| AcsI | RAATTY | 5 cut(s) | 592, 1442, 1565, 1627, 2210 |
| AcuI | CTGAAG | 5 cut(s) | 56, 636, 1203, 2129, 2562 |
| AfaI | GTAC | 3 cut(s) | 840, 1612, 2140 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 809, 1776, 2382, 2482 |
| AflII | CTTAAG | 1 cut(s) | 1622 |
| AflIII | ACRYGT | 1 cut(s) | 2754 |
| AjnI | CCWGG | 3 cut(s) | 396, 585, 2073 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 87, 119, 2693, 2725 |
| AleI | CACNNNNGTG | 1 cut(s) | 2093 |
| Alw21I | GWGCWC | 3 cut(s) | 1856, 1936, 2482 |
| Alw26I | GTCTC | 7 cut(s) | 58, 1211, 1571, 1665, 1775, 1972, 2563 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1082, 1268, 1724, 2177 |
| Ama87I | CYCGRG | 2 cut(s) | 327, 2481 |
| Aor13HI | TCCGGA | 1 cut(s) | 346 |
| AoxI | GGCC | 9 cut(s) | 3, 91, 1242, 1466, 1767, 1923, 2415, 2484, 2712 |
| ApoI | RAATTY | 5 cut(s) | 592, 1442, 1565, 1627, 2210 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 42, 74 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 652 |
| AspLEI | GCGC | 2 cut(s) | 29, 85 |
| AspS9I | GGNCC | 8 cut(s) | 344, 583, 718, 1484, 1767, 2415, 2484, 2713 |
| AsuC2I | CCSGG | 4 cut(s) | 7, 24, 90, 1766 |
| AsuHPI | GGTGA | 4 cut(s) | 253, 749, 1145, 1302 |
| AsuII | TTCGAA | 1 cut(s) | 2128 |
| AvaI | CYCGRG | 2 cut(s) | 327, 2481 |
| AvaII | GGWCC | 4 cut(s) | 344, 583, 718, 1484 |
| AxyI | CCTNAGG | 2 cut(s) | 675, 1096 |
| BamHI | GGATCC | 2 cut(s) | 382, 2560 |
| BanI | GGYRCC | 2 cut(s) | 523, 940 |
| BbsI | GAAGAC | 3 cut(s) | 2117, 2285, 2668 |
| Bbv12I | GWGCWC | 3 cut(s) | 1856, 1936, 2482 |
| BbvCI | CCTCAGC | 1 cut(s) | 920 |
| BccI | CCATC | 4 cut(s) | 468, 1253, 1429, 1592 |
| BceAI | ACGGC | 2 cut(s) | 86, 1665 |
| BciT130I | CCWGG | 3 cut(s) | 398, 587, 2075 |
| BciVI | GTATCC | 1 cut(s) | 1907 |
| BcnI | CCSGG | 4 cut(s) | 7, 24, 90, 1766 |
| BcoDI | GTCTC | 7 cut(s) | 58, 1211, 1571, 1665, 1775, 1972, 2563 |
| BfmI | CTRYAG | 4 cut(s) | 851, 1997, 2178, 2685 |
| BfoI | RGCGCY | 1 cut(s) | 30 |
| BfrI | CTTAAG | 1 cut(s) | 1622 |
| BfuAI | ACCTGC | 1 cut(s) | 826 |
| BfuI | GTATCC | 1 cut(s) | 1907 |
| BglII | AGATCT | 2 cut(s) | 75, 793 |
| BmcAI | AGTACT | 1 cut(s) | 1612 |
| Bme1390I | CCNGG | 7 cut(s) | 7, 24, 90, 398, 587, 1766, 2075 |
| Bme18I | GGWCC | 4 cut(s) | 344, 583, 718, 1484 |
| BmeT110I | CYCGRG | 2 cut(s) | 327, 2481 |
| BmgT120I | GGNCC | 8 cut(s) | 344, 583, 718, 1484, 1767, 2415, 2484, 2713 |
| BmiI | GGNNCC | 8 cut(s) | 345, 384, 525, 711, 720, 942, 1486, 2562 |
| BmrFI | CCNGG | 7 cut(s) | 7, 24, 90, 398, 587, 1766, 2075 |
| BmrI | ACTGGG | 4 cut(s) | 1304, 1511, 1680, 2666 |
| BmsI | GCATC | 5 cut(s) | 1088, 1125, 1736, 2087, 2363 |
| BmuI | ACTGGG | 4 cut(s) | 1304, 1511, 1680, 2666 |
| BpiI | GAAGAC | 3 cut(s) | 2117, 2285, 2668 |
| BpmI | CTGGAG | 4 cut(s) | 608, 1059, 1190, 2618 |
| Bpu10I | CCTNAGC | 2 cut(s) | 920, 945 |
| Bpu14I | TTCGAA | 1 cut(s) | 2128 |
| BpuEI | CTTGAG | 5 cut(s) | 487, 1387, 2440, 2712, 2738 |
| BpuMI | CCSGG | 4 cut(s) | 7, 24, 90, 1766 |
| BsaBI | GATNNNNATC | 1 cut(s) | 798 |
| BsaJI | CCNNGG | 3 cut(s) | 337, 397, 1488 |
| BsaWI | WCCGGW | 1 cut(s) | 346 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 809, 1776, 2382, 2482 |
| Bse21I | CCTNAGG | 2 cut(s) | 675, 1096 |
| Bse3DI | GCAATG | 1 cut(s) | 2141 |
| Bse8I | GATNNNNATC | 1 cut(s) | 798 |
| BseAI | TCCGGA | 1 cut(s) | 346 |
| BseBI | CCWGG | 3 cut(s) | 398, 587, 2075 |
| BseDI | CCNNGG | 3 cut(s) | 337, 397, 1488 |
| BseGI | GGATG | 6 cut(s) | 208, 355, 408, 541, 769, 1137 |
| BseJI | GATNNNNATC | 1 cut(s) | 798 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 809, 1776, 2382, 2482 |
| BseMI | GCAATG | 1 cut(s) | 2141 |
| BseMII | CTCAG | 5 cut(s) | 542, 911, 936, 1566, 2558 |
| BseRI | GAGGAG | 2 cut(s) | 109, 345 |
| BsgI | GTGCAG | 2 cut(s) | 1065, 1725 |
| Bsh1236I | CGCG | 1 cut(s) | 83 |
| BshFI | GGCC | 9 cut(s) | 5, 93, 1244, 1468, 1769, 1925, 2417, 2486, 2714 |
| BshNI | GGYRCC | 2 cut(s) | 523, 940 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1856, 1936, 2482 |
| BsiHKCI | CYCGRG | 2 cut(s) | 327, 2481 |
| BsiSI | CCGG | 5 cut(s) | 6, 24, 90, 347, 1765 |
| BslFI | GGGAC | 2 cut(s) | 1470, 1668 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 809, 1776, 2382, 2482 |
| BsmAI | GTCTC | 7 cut(s) | 58, 1211, 1571, 1665, 1775, 1972, 2563 |
| BsmFI | GGGAC | 2 cut(s) | 1470, 1668 |
| BsnI | GGCC | 9 cut(s) | 5, 93, 1244, 1468, 1769, 1925, 2417, 2486, 2714 |
| BsoBI | CYCGRG | 2 cut(s) | 327, 2481 |
| Bsp119I | TTCGAA | 1 cut(s) | 2128 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1856, 1936, 2482 |
| Bsp13I | TCCGGA | 1 cut(s) | 346 |
| BspACI | CCGC | 9 cut(s) | 44, 86, 123, 139, 415, 716, 1187, 1241, 1572 |
| BspANI | GGCC | 9 cut(s) | 5, 93, 1244, 1468, 1769, 1925, 2417, 2486, 2714 |
| BspCNI | CTCAG | 5 cut(s) | 541, 912, 937, 1567, 2559 |
| BspEI | TCCGGA | 1 cut(s) | 346 |
| BspFNI | CGCG | 1 cut(s) | 83 |
| BspHI | TCATGA | 3 cut(s) | 991, 1663, 2008 |
| BspLI | GGNNCC | 8 cut(s) | 345, 384, 525, 711, 720, 942, 1486, 2562 |
| BspMAI | CTGCAG | 1 cut(s) | 2689 |
| BspMI | ACCTGC | 1 cut(s) | 826 |
| BspQI | GCTCTTC | 1 cut(s) | 1756 |
| BspT104I | TTCGAA | 1 cut(s) | 2128 |
| BspT107I | GGYRCC | 2 cut(s) | 523, 940 |
| BspTI | CTTAAG | 1 cut(s) | 1622 |
| BsrDI | GCAATG | 1 cut(s) | 2141 |
| BssECI | CCNNGG | 3 cut(s) | 337, 397, 1488 |
| BssT1I | CCWWGG | 2 cut(s) | 337, 1488 |
| Bst2UI | CCWGG | 3 cut(s) | 398, 587, 2075 |
| Bst4CI | ACNGT | 4 cut(s) | 473, 1043, 1356, 2239 |
| Bst6I | CTCTTC | 5 cut(s) | 286, 643, 1376, 1756, 2673 |
| BstAFI | CTTAAG | 1 cut(s) | 1622 |
| BstBI | TTCGAA | 1 cut(s) | 2128 |
| BstEII | GGTNACC | 1 cut(s) | 1151 |
| BstF5I | GGATG | 6 cut(s) | 208, 355, 408, 541, 769, 1137 |
| BstFNI | CGCG | 1 cut(s) | 83 |
| BstH2I | RGCGCY | 1 cut(s) | 30 |
| BstHHI | GCGC | 2 cut(s) | 29, 85 |
| BstMAI | GTCTC | 7 cut(s) | 58, 1211, 1571, 1665, 1775, 1972, 2563 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 677, 925, 1931, 2011, 2180, 2414, 2593, 2621 |
| BstNI | CCWGG | 3 cut(s) | 398, 587, 2075 |
| BstNSI | RCATGY | 4 cut(s) | 1224, 1460, 2203, 2758 |
| BstPI | GGTNACC | 1 cut(s) | 1151 |
| BstSCI | CCNGG | 7 cut(s) | 5, 22, 88, 396, 585, 1764, 2073 |
| BstSFI | CTRYAG | 4 cut(s) | 851, 1997, 2178, 2685 |
| BstUI | CGCG | 1 cut(s) | 83 |
| BstV2I | GAAGAC | 3 cut(s) | 2117, 2285, 2668 |
| BstX2I | RGATCY | 8 cut(s) | 75, 382, 793, 887, 1980, 2341, 2560, 2740 |
| BstYI | RGATCY | 8 cut(s) | 75, 382, 793, 887, 1980, 2341, 2560, 2740 |
| Bsu36I | CCTNAGG | 2 cut(s) | 675, 1096 |
| BsuI | GTATCC | 1 cut(s) | 1907 |
| BsuRI | GGCC | 9 cut(s) | 5, 93, 1244, 1468, 1769, 1925, 2417, 2486, 2714 |
| BtgZI | GCGATG | 1 cut(s) | 2073 |
| BtsCI | GGATG | 6 cut(s) | 208, 355, 408, 541, 769, 1137 |
| BtsI | GCAGTG | 2 cut(s) | 1024, 1770 |
| BtsIMutI | CAGTG | 8 cut(s) | 612, 829, 1024, 1048, 1693, 1770, 2088, 2170 |
| BveI | ACCTGC | 1 cut(s) | 826 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1082, 1268, 1724, 2177 |
| CciI | TCATGA | 3 cut(s) | 991, 1663, 2008 |
| CfoI | GCGC | 2 cut(s) | 29, 85 |
| Cfr13I | GGNCC | 8 cut(s) | 344, 583, 718, 1484, 1767, 2415, 2484, 2713 |
| CseI | GACGC | 2 cut(s) | 875, 1462 |
| Csp6I | GTAC | 3 cut(s) | 839, 1611, 2139 |
| CviQI | GTAC | 3 cut(s) | 839, 1611, 2139 |
| EaeI | YGGCCR | 3 cut(s) | 3, 91, 1242 |
| Eam1104I | CTCTTC | 5 cut(s) | 286, 643, 1376, 1756, 2673 |
| EarI | CTCTTC | 5 cut(s) | 286, 643, 1376, 1756, 2673 |
| EciI | GGCGGA | 1 cut(s) | 112 |
| Eco130I | CCWWGG | 2 cut(s) | 337, 1488 |
| Eco147I | AGGCCT | 2 cut(s) | 1468, 1925 |
| Eco47I | GGWCC | 4 cut(s) | 344, 583, 718, 1484 |
| Eco57I | CTGAAG | 5 cut(s) | 56, 636, 1203, 2129, 2562 |
| Eco81I | CCTNAGG | 2 cut(s) | 675, 1096 |
| Eco88I | CYCGRG | 2 cut(s) | 327, 2481 |
| Eco91I | GGTNACC | 1 cut(s) | 1151 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2415 |
| EcoO65I | GGTNACC | 1 cut(s) | 1151 |
| EcoRII | CCWGG | 3 cut(s) | 396, 585, 2073 |
| EcoT14I | CCWWGG | 2 cut(s) | 337, 1488 |
| EcoT22I | ATGCAT | 1 cut(s) | 1140 |
| ErhI | CCWWGG | 2 cut(s) | 337, 1488 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 640, 672, 2109, 2141 |
| FaqI | GGGAC | 2 cut(s) | 1470, 1668 |
| FokI | GGATG | 6 cut(s) | 215, 362, 415, 548, 756, 1144 |
| GlaI | GCGC | 2 cut(s) | 28, 84 |
| GsuI | CTGGAG | 4 cut(s) | 608, 1059, 1190, 2618 |
| HaeII | RGCGCY | 1 cut(s) | 30 |
| HaeIII | GGCC | 9 cut(s) | 5, 93, 1244, 1468, 1769, 1925, 2417, 2486, 2714 |
| HapII | CCGG | 5 cut(s) | 6, 24, 90, 347, 1765 |
| HgaI | GACGC | 2 cut(s) | 875, 1462 |
| HhaI | GCGC | 2 cut(s) | 29, 85 |
| Hin6I | GCGC | 2 cut(s) | 27, 83 |
| HinP1I | GCGC | 2 cut(s) | 27, 83 |
| HindIII | AAGCTT | 7 cut(s) | 934, 1502, 1883, 2039, 2524, 2574, 2622 |
| HinfI | GANTC | 9 cut(s) | 10, 260, 333, 539, 1018, 2070, 2449, 2701, 2722 |
| HpaII | CCGG | 5 cut(s) | 6, 24, 90, 347, 1765 |
| HphI | GGTGA | 4 cut(s) | 253, 749, 1145, 1302 |
| Hpy166II | GTNNAC | 3 cut(s) | 244, 812, 961 |
| Hpy8I | GTNNAC | 3 cut(s) | 244, 812, 961 |
| HpyAV | CCTTC | 6 cut(s) | 80, 118, 124, 746, 1049, 2135 |
| HpyCH4III | ACNGT | 4 cut(s) | 473, 1043, 1356, 2239 |
| HpyCH4IV | ACGT | 1 cut(s) | 2550 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 677, 925, 1931, 2011, 2180, 2414, 2593, 2621 |
| HpySE526I | ACGT | 1 cut(s) | 2550 |
| HspAI | GCGC | 2 cut(s) | 27, 83 |
| Kpn2I | TCCGGA | 1 cut(s) | 346 |
| LguI | GCTCTTC | 1 cut(s) | 1756 |
| LmnI | GCTCC | 1 cut(s) | 856 |
| LweI | GCATC | 5 cut(s) | 1088, 1125, 1736, 2087, 2363 |
| MaeII | ACGT | 1 cut(s) | 2550 |
| MaeIII | GTNAC | 9 cut(s) | 37, 610, 737, 971, 1151, 1734, 1974, 2086, 2204 |
| MfeI | CAATTG | 3 cut(s) | 218, 1553, 2591 |
| MflI | RGATCY | 8 cut(s) | 75, 382, 793, 887, 1980, 2341, 2560, 2740 |
| MhlI | GDGCHC | 3 cut(s) | 1856, 1936, 2482 |
| MlyI | GAGTC | 2 cut(s) | 342, 2079 |
| MmeI | TCCRAC | 3 cut(s) | 513, 667, 1915 |
| Mph1103I | ATGCAT | 1 cut(s) | 1140 |
| MroI | TCCGGA | 1 cut(s) | 346 |
| MroXI | GAANNNNTTC | 1 cut(s) | 652 |
| MslI | CAYNNNNRTG | 4 cut(s) | 666, 1668, 2013, 2093 |
| MspA1I | CMGCKG | 4 cut(s) | 417, 1574, 2002, 2177 |
| MspCI | CTTAAG | 1 cut(s) | 1622 |
| MspI | CCGG | 5 cut(s) | 6, 24, 90, 347, 1765 |
| MspR9I | CCNGG | 7 cut(s) | 7, 24, 90, 398, 587, 1766, 2075 |
| MunI | CAATTG | 3 cut(s) | 218, 1553, 2591 |
| MvaI | CCWGG | 3 cut(s) | 398, 587, 2075 |
| MvnI | CGCG | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 677, 925, 1931, 2011, 2180, 2414, 2593, 2621 |
| NciI | CCSGG | 4 cut(s) | 7, 24, 90, 1766 |
| NlaIV | GGNNCC | 8 cut(s) | 345, 384, 525, 711, 720, 942, 1486, 2562 |
| NmeAIII | GCCGAG | 3 cut(s) | 1180, 1975, 2401 |
| NmuCI | GTSAC | 6 cut(s) | 37, 610, 737, 1151, 1974, 2086 |
| NsiI | ATGCAT | 1 cut(s) | 1140 |
| NspI | RCATGY | 4 cut(s) | 1224, 1460, 2203, 2758 |
| NspV | TTCGAA | 1 cut(s) | 2128 |
| OliI | CACNNNNGTG | 1 cut(s) | 2093 |
| PaeR7I | CTCGAG | 1 cut(s) | 327 |
| PagI | TCATGA | 3 cut(s) | 991, 1663, 2008 |
| PceI | AGGCCT | 2 cut(s) | 1468, 1925 |
| PciI | ACATGT | 1 cut(s) | 2754 |
| PciSI | GCTCTTC | 1 cut(s) | 1756 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2134 |
| PdmI | GAANNNNTTC | 1 cut(s) | 652 |
| PfeI | GAWTC | 7 cut(s) | 10, 260, 539, 1018, 2449, 2701, 2722 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1776 |
| PleI | GAGTC | 2 cut(s) | 341, 2078 |
| PpsI | GAGTC | 2 cut(s) | 341, 2078 |
| PscI | ACATGT | 1 cut(s) | 2754 |
| PsiI | TTATAA | 1 cut(s) | 489 |
| Psp6I | CCWGG | 3 cut(s) | 396, 585, 2073 |
| PspEI | GGTNACC | 1 cut(s) | 1151 |
| PspGI | CCWGG | 3 cut(s) | 396, 585, 2073 |
| PspN4I | GGNNCC | 8 cut(s) | 345, 384, 525, 711, 720, 942, 1486, 2562 |
| PspPI | GGNCC | 8 cut(s) | 344, 583, 718, 1484, 1767, 2415, 2484, 2713 |
| PspXI | VCTCGAGB | 1 cut(s) | 327 |
| PstI | CTGCAG | 1 cut(s) | 2689 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1082, 1268, 1724, 2177 |
| PsuI | RGATCY | 8 cut(s) | 75, 382, 793, 887, 1980, 2341, 2560, 2740 |
| PvuII | CAGCTG | 2 cut(s) | 2002, 2177 |
| RsaI | GTAC | 3 cut(s) | 840, 1612, 2140 |
| RsaNI | GTAC | 3 cut(s) | 839, 1611, 2139 |
| RseI | CAYNNNNRTG | 4 cut(s) | 666, 1668, 2013, 2093 |
| SapI | GCTCTTC | 1 cut(s) | 1756 |
| Sau96I | GGNCC | 8 cut(s) | 344, 583, 718, 1484, 1767, 2415, 2484, 2713 |
| ScaI | AGTACT | 1 cut(s) | 1612 |
| SchI | GAGTC | 2 cut(s) | 342, 2079 |
| ScrFI | CCNGG | 7 cut(s) | 7, 24, 90, 398, 587, 1766, 2075 |
| SduI | GDGCHC | 3 cut(s) | 1856, 1936, 2482 |
| SfaNI | GCATC | 5 cut(s) | 1088, 1125, 1736, 2087, 2363 |
| SfcI | CTRYAG | 4 cut(s) | 851, 1997, 2178, 2685 |
| Sfr274I | CTCGAG | 1 cut(s) | 327 |
| SfuI | TTCGAA | 1 cut(s) | 2128 |
| SinI | GGWCC | 4 cut(s) | 344, 583, 718, 1484 |
| SlaI | CTCGAG | 1 cut(s) | 327 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 666, 1668, 2013, 2093 |
| SmlI | CTYRAG | 7 cut(s) | 327, 502, 1366, 1622, 2419, 2717, 2727 |
| SmoI | CTYRAG | 7 cut(s) | 327, 502, 1366, 1622, 2419, 2717, 2727 |
| SseBI | AGGCCT | 2 cut(s) | 1468, 1925 |
| SsiI | CCGC | 9 cut(s) | 44, 86, 123, 139, 415, 716, 1187, 1241, 1572 |
| StuI | AGGCCT | 2 cut(s) | 1468, 1925 |
| StyD4I | CCNGG | 7 cut(s) | 5, 22, 88, 396, 585, 1764, 2073 |
| StyI | CCWWGG | 2 cut(s) | 337, 1488 |
| TaaI | ACNGT | 4 cut(s) | 473, 1043, 1356, 2239 |
| TaiI | ACGT | 1 cut(s) | 2553 |
| TaqI | TCGA | 8 cut(s) | 177, 189, 328, 873, 1850, 2128, 2226, 2751 |
| TatI | WGTACW | 1 cut(s) | 1610 |
| TauI | GCSGC | 5 cut(s) | 46, 88, 417, 1244, 1574 |
| TfiI | GAWTC | 7 cut(s) | 10, 260, 539, 1018, 2449, 2701, 2722 |
| TscAI | CASTG | 8 cut(s) | 619, 836, 1031, 1048, 1693, 1777, 2095, 2170 |
| TseFI | GTSAC | 6 cut(s) | 37, 610, 737, 1151, 1974, 2086 |
| Tsp45I | GTSAC | 6 cut(s) | 37, 610, 737, 1151, 1974, 2086 |
| TspGWI | ACGGA | 5 cut(s) | 46, 1803, 1993, 2286, 2465 |
| TspRI | CASTG | 8 cut(s) | 619, 836, 1031, 1048, 1693, 1777, 2095, 2170 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1776 |
| Vha464I | CTTAAG | 1 cut(s) | 1622 |
| VpaK11BI | GGWCC | 4 cut(s) | 344, 583, 718, 1484 |
| XapI | RAATTY | 5 cut(s) | 592, 1442, 1565, 1627, 2210 |
| XbaI | TCTAGA | 1 cut(s) | 1907 |
| XceI | RCATGY | 4 cut(s) | 1224, 1460, 2203, 2758 |
| XhoI | CTCGAG | 1 cut(s) | 327 |
| XmnI | GAANNNNTTC | 1 cut(s) | 652 |
| ZrmI | AGTACT | 1 cut(s) | 1612 |
| Zsp2I | ATGCAT | 1 cut(s) | 1140 |