RchiOBHm_Chr2g0160891

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
76797964 .. 76801230
3267 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52929

Sequence Viewer

Length: 2451 bp
ATGGGGGGGTGGCTCTTTCTTTCTATTGTTATGTTACTCTCATCTATTTGTAGTAGCCAGGACACTATAATACCAGGCAAATCTATCAGTGCAAACCAGACATTAATTTCTTCCAATGGAACCTTTGGATTAGGTTTTTTCAGTCCACAAAATTCTACCAAATTTTTCCTAGGTATATGGTACAACACAATCCCACACACTGCATCAATTGTATGGGTAGCCAACAGAGAATCCCCACTTGATTCTCCAGGTTTTTTTGCCCTCAGAGGTGATGGGAATCTTGTGGTGTTGGATGGAACTGGAAAAGTACTTATCTGGTCATCTAATGCATCAGTTGCTTCTTCGGCAAGGAATGCCACAACTGGTTTCCTAATGAATAACGGAAACCTCGTTCTGAGGTTTGGAAAAGGCATTTTGTGGCAGAGCTTTGATCATCCTTCTGATACATTGTTGCCTGAAATGAAGGTTAGCTTGAACAAAAGGAGTGGCCAACAAAGATGCCTTACATCCTGGGCAGCGCTTGATGATCCACATCCCGGAAAGTTCACTTTAGGCTTTGATCCTAAAGGACTACCAGGGCAGGCTTATATCTGGAAGGAAAATGCTCCATATTGGAGAAGTGGTACCTTCTTTGGCAAGGAGACGAAAACAAACTTTGGAATTTCAACTGAAAATTCGTATTTCCTCACTTACAACTTTGATGCTAATGAGGACTATCTTACTTATGGTGTCTCGGTGTCGGTTAGTCCAGTAAAATTGAGGGCCTTGCTGGATCCAACTGGGCAGATTGTGATGCAGCAATGGCTGGTTCACAGTAGAACATGGTATGCATGGTGGAGGGAGCCGGTTCATAAATGTGATTTTTATGCTCCTTGTGGTCCATATGGTGCCTGTGATAAAAATGAGTCCCTCTCATCTCCATGTAAATGTTTGACAGGTTTTATACCCAAATTTCAGAAACAATGGGCTCAGGGGGATTGGGCTGGTGGATGTGTCAGGGAAAAACCACTGACATGCGATACCAGATCAGAAGGATTTTCAAGGTTTGAAGGGTTGAAACTACCAGATCATGCTGTTCTTTTAGTCAATAAGAGAATGAGCGAGTGTGAGTCTCAATGCTATCAGAACTGTTCTTGCACAGCTTATGCTTACCTGAATGAGACAGGAGAAAATACCGCGAGATGTTTGACATGGTTTGGTGACTTGATTGATCTTGTAGCAAATCACTCTCTTGGGAAAAATATTTTTATTCGTGTTCATCGCTCCAATCAAGCTGGTAAGGGTCATTCTGATAATTCCTTGAAGGTGTCCCTTGTAATTGTCATAGCCTCAGCAATAGCAGGACTGATTATATTAACTTTGGGCTATTTCTTAGGGAAGAAATTTTTGGGCAGGGAGTATGGGAGAGATTCTATCAAGAATGTCAGTGTTGGAGGTGGAAAAAATAATATAGAACTCCCACATTTTGGTTTAAGGAGTATATTAGTTGCTACAAACAACTTCTCTGAAGCTAATAAACTAGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGGATTTTGACTGAAAATCAAGAAGTAGCCATAAAAAGGCTATCCACGAAGTCCGGGCAAGGACATCAGGAGTTCATGAATGAGTTAAAGCTTATATCTAAACTTCAGCATACCAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAGAAGAGGAAAGGTTATTGATGTATGAGTACATGCCCAATCGAAGTTTAGACAAGTTTTTGTTTGATCCATCTGGAAATTCAGAATTGGATTGGAATACTCGTTTTCGAATTATAGAAGGGATTGCACAAGGAGTACTTTATATCCATAAGTACTCAAGACTGAAAATCATTCATAGGGACCTCAAAGCAAGTAATATTTTGTTGGATGGAACAATGAACCCCAAAATTTCAGATTTTGGAATGGCAAAGATTTTCGATACGAATCAAACAGAAGCAAATACCAACAGGATTGTTGGAACATACGGCTACATGTCTCCTGAATACGCTCTCTATGGCCATTTTTCTGATAAATTGGATGTATTTAGCTTTGGGGTGTTGTTGCTGGAGATTGTAAGTGGAAGGAAGAATGCTATTTTTCATCATTTTGATCGTTCACTAACTCTTGCTGGATGGGTATGGGAGTTATGGAAGGAAGGAAGAGGAGTGGAGGTGATTGATGCATCAATAAGGGAAACATGCCAGTTTCATGAGGCTCTAAGGTGTATCCATGTAGGGCTCTTGTGTGTTCAACAAGCTGCAGCTGATCGACCAACAATGTCCTCGGTAATTCTTATGCTGCAGGGCACTGGAGCTTCATCACTTCCACCTTCCAATGAACCTGCCTTTTCAACACTTGAGAACGCCAATGTTGTTGGTTCATCTACTAGGTTTTCCAATAATGAAATTACCAATAGTTTACTAGAAGCTCGGTAG

Protein Analysis

816

Amino Acids

90.7

Weight (kDa)

8.14

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 70 - 171 1.7e-28 D-mannose binding lectin
S_locus_glycop PF00954 205 - 317 5.8e-19 S-locus glycoprotein domain
PAN_2 PF08276 339 - 405 2.9e-15 PAN-like domain
Pkinase PF00069 502 - 701 2.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 504 - 769 1.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1548
Acc36I ACCTGC 1 cut(s) 2365
Acc65I GGTACC 1 cut(s) 623
AccB1I GGYRCC 2 cut(s) 623, 887
AccB7I CCANNNNNTGG 1 cut(s) 1466
AccII CGCG 1 cut(s) 1178
AciI CCGC 1 cut(s) 1176
AclWI GGATC 5 cut(s) 521, 554, 767, 780, 1757
AcoI YGGCCR 2 cut(s) 487, 2032
AcsI RAATTY 8 cut(s) 151, 161, 660, 673, 950, 1382, 1774, 1923
AcuI CTGAAG 2 cut(s) 1527, 1640
AfaI GTAC 6 cut(s) 182, 309, 625, 1727, 1833, 1850
AfeI AGCGCT 1 cut(s) 519
AfiI CCNNNNNNNGG 3 cut(s) 536, 1466, 1587
AflIII ACRYGT 1 cut(s) 2007
AgsI TTSAA 9 cut(s) 475, 666, 1041, 1049, 1057, 1303, 1697, 2267, 2367
AjnI CCWGG 5 cut(s) 57, 73, 247, 509, 574
AjuI GAANNNNNNNTTGG 2 cut(s) 1370, 1402
AloI GAACNNNNNNTCC 2 cut(s) 375, 407
Alw26I GTCTC 5 cut(s) 635, 736, 1116, 1154, 2016
AlwI GGATC 5 cut(s) 521, 554, 767, 780, 1757
Aor51HI AGCGCT 1 cut(s) 519
AoxI GGCC 4 cut(s) 487, 762, 1537, 2032
ApeKI GCWGC 5 cut(s) 515, 796, 2273, 2276, 2314
ApoI RAATTY 8 cut(s) 151, 161, 660, 673, 950, 1382, 1774, 1923
AseI ATTAAT 1 cut(s) 104
Asp718I GGTACC 1 cut(s) 623
AspA2I CCTAGG 1 cut(s) 169
AspLEI GCGC 1 cut(s) 520
AspS9I GGNCC 4 cut(s) 762, 878, 1538, 1876
AsuC2I CCSGG 2 cut(s) 537, 1606
AsuHPI GGTGA 3 cut(s) 281, 1211, 2200
AsuII TTCGAA 1 cut(s) 1804
AvaII GGWCC 2 cut(s) 878, 1876
AvrII CCTAGG 1 cut(s) 169
BaeGI GKGCMC 1 cut(s) 2324
BalI TGGCCA 2 cut(s) 489, 2034
BamHI GGATCC 1 cut(s) 772
BanI GGYRCC 2 cut(s) 623, 887
BanII GRGCYC 2 cut(s) 970, 2256
BbvCI CCTCAGC 1 cut(s) 1330
BbvI GCAGC 5 cut(s) 527, 808, 2260, 2288, 2301
BccI CCATC 5 cut(s) 266, 287, 1774, 1898, 2142
BceAI ACGGC 1 cut(s) 2017
BciT130I CCWGG 5 cut(s) 59, 75, 249, 511, 576
BciVI GTATCC 1 cut(s) 2252
BclI TGATCA 1 cut(s) 430
BcnI CCSGG 2 cut(s) 537, 1606
BcoDI GTCTC 5 cut(s) 635, 736, 1116, 1154, 2016
BfaI CTAG 4 cut(s) 170, 1520, 2403, 2438
BfmI CTRYAG 2 cut(s) 2274, 2315
BfoI RGCGCY 1 cut(s) 521
BfuAI ACCTGC 1 cut(s) 2365
BfuI GTATCC 1 cut(s) 2252
BisI GCNGC 5 cut(s) 516, 797, 2274, 2277, 2315
BlnI CCTAGG 1 cut(s) 169
BlsI GCNGC 5 cut(s) 517, 798, 2275, 2278, 2316
BmcAI AGTACT 3 cut(s) 309, 1833, 1850
Bme1390I CCNGG 7 cut(s) 59, 75, 249, 511, 537, 576, 1606
Bme18I GGWCC 2 cut(s) 878, 1876
BmgT120I GGNCC 4 cut(s) 762, 878, 1538, 1876
BmiI GGNNCC 6 cut(s) 121, 625, 774, 843, 889, 1877
BmrFI CCNGG 7 cut(s) 59, 75, 249, 511, 537, 576, 1606
BmrI ACTGGG 1 cut(s) 789
BmsI GCATC 7 cut(s) 212, 338, 488, 691, 783, 2185, 2207
BmuI ACTGGG 1 cut(s) 789
BplI GAGNNNNNCTC 2 cut(s) 896, 928
BpmI CTGGAG 3 cut(s) 231, 2102, 2346
Bpu10I CCTNAGC 2 cut(s) 969, 1330
Bpu14I TTCGAA 1 cut(s) 1804
BpuEI CTTGAG 2 cut(s) 1837, 2393
BpuMI CCSGG 2 cut(s) 537, 1606
BsaBI GATNNNNATC 3 cut(s) 276, 531, 1959
BsaJI CCNNGG 4 cut(s) 169, 510, 575, 2298
BsaXI ACNNNNNCTCC 4 cut(s) 607, 637, 2172, 2202
Bsc4I CCNNNNNNNGG 3 cut(s) 536, 1466, 1587
Bse118I RCCGGY 1 cut(s) 844
Bse1I ACTGG 6 cut(s) 304, 367, 749, 784, 2218, 2329
Bse3DI GCAATG 1 cut(s) 806
Bse8I GATNNNNATC 3 cut(s) 276, 531, 1959
BseBI CCWGG 5 cut(s) 59, 75, 249, 511, 576
BseDI CCNNGG 4 cut(s) 169, 510, 575, 2298
BseGI GGATG 8 cut(s) 298, 433, 506, 532, 995, 1909, 2059, 2153
BseJI GATNNNNATC 3 cut(s) 276, 531, 1959
BseLI CCNNNNNNNGG 3 cut(s) 536, 1466, 1587
BseMI GCAATG 1 cut(s) 806
BseMII CTCAG 4 cut(s) 277, 386, 983, 1344
BseNI ACTGG 6 cut(s) 304, 367, 749, 784, 2218, 2329
BseRI GAGGAG 1 cut(s) 2193
BseSI GKGCMC 1 cut(s) 2324
BseXI GCAGC 5 cut(s) 527, 808, 2260, 2288, 2301
Bsh1236I CGCG 1 cut(s) 1178
BshFI GGCC 4 cut(s) 489, 764, 1539, 2034
BshNI GGYRCC 2 cut(s) 623, 887
BsiSI CCGG 3 cut(s) 537, 845, 1605
BslFI GGGAC 3 cut(s) 892, 1294, 1889
BslI CCNNNNNNNGG 3 cut(s) 536, 1466, 1587
BsmAI GTCTC 5 cut(s) 635, 736, 1116, 1154, 2016
BsmBI CGTCTC 1 cut(s) 635
BsmFI GGGAC 3 cut(s) 892, 1294, 1889
BsmI GAATGC 2 cut(s) 358, 2110
BsnI GGCC 4 cut(s) 489, 764, 1539, 2034
Bsp119I TTCGAA 1 cut(s) 1804
Bsp1286I GDGCHC 3 cut(s) 970, 2256, 2324
BspACI CCGC 1 cut(s) 1176
BspANI GGCC 4 cut(s) 489, 764, 1539, 2034
BspCNI CTCAG 4 cut(s) 276, 387, 982, 1343
BspFNI CGCG 1 cut(s) 1178
BspHI TCATGA 2 cut(s) 1626, 2224
BspLI GGNNCC 6 cut(s) 121, 625, 774, 843, 889, 1877
BspMAI CTGCAG 2 cut(s) 2278, 2319
BspMI ACCTGC 1 cut(s) 2365
BspPI GGATC 5 cut(s) 521, 554, 767, 780, 1757
BspT104I TTCGAA 1 cut(s) 1804
BspT107I GGYRCC 2 cut(s) 623, 887
BsrDI GCAATG 1 cut(s) 806
BsrFI RCCGGY 1 cut(s) 844
BsrI ACTGG 6 cut(s) 304, 367, 749, 784, 2218, 2329
BssAI RCCGGY 1 cut(s) 844
BssECI CCNNGG 4 cut(s) 169, 510, 575, 2298
BssT1I CCWWGG 1 cut(s) 169
Bst2UI CCWGG 5 cut(s) 59, 75, 249, 511, 576
Bst4CI ACNGT 2 cut(s) 815, 1130
Bst6I CTCTTC 2 cut(s) 1695, 2170
BstAPI GCANNNNNTGC 2 cut(s) 335, 353
BstBI TTCGAA 1 cut(s) 1804
BstC8I GCNNGC 1 cut(s) 582
BstDEI CTNAG 6 cut(s) 263, 395, 969, 1330, 1372, 2234
BstF5I GGATG 8 cut(s) 298, 433, 506, 532, 995, 1909, 2059, 2153
BstFNI CGCG 1 cut(s) 1178
BstH2I RGCGCY 1 cut(s) 521
BstHHI GCGC 1 cut(s) 520
BstMAI GTCTC 5 cut(s) 635, 736, 1116, 1154, 2016
BstMWI GCNNNNNNNGC 4 cut(s) 335, 344, 353, 802
BstNI CCWGG 5 cut(s) 59, 75, 249, 511, 576
BstNSI RCATGY 4 cut(s) 1017, 1732, 2011, 2217
BstSCI CCNGG 7 cut(s) 57, 73, 247, 509, 535, 574, 1604
BstSFI CTRYAG 2 cut(s) 2274, 2315
BstSLI GKGCMC 1 cut(s) 2324
BstUI CGCG 1 cut(s) 1178
BstV1I GCAGC 5 cut(s) 527, 808, 2260, 2288, 2301
BstX2I RGATCY 1 cut(s) 772
BstYI RGATCY 1 cut(s) 772
BsuI GTATCC 1 cut(s) 2252
BsuRI GGCC 4 cut(s) 489, 764, 1539, 2034
BtgZI GCGATG 1 cut(s) 1244
BtsCI GGATG 8 cut(s) 298, 433, 506, 532, 995, 1909, 2059, 2153
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 5 cut(s) 94, 198, 1007, 1432, 2322
BveI ACCTGC 1 cut(s) 2365
Cac8I GCNNGC 1 cut(s) 582
CciI TCATGA 2 cut(s) 1626, 2224
CfoI GCGC 1 cut(s) 520
Cfr10I RCCGGY 1 cut(s) 844
Cfr13I GGNCC 4 cut(s) 762, 878, 1538, 1876
Csp6I GTAC 6 cut(s) 181, 308, 624, 1726, 1832, 1849
CspCI CAANNNNNGTGG 2 cut(s) 466, 501
CviQI GTAC 6 cut(s) 181, 308, 624, 1726, 1832, 1849
DdeI CTNAG 6 cut(s) 263, 395, 969, 1330, 1372, 2234
EaeI YGGCCR 2 cut(s) 487, 2032
Eam1104I CTCTTC 2 cut(s) 1695, 2170
EarI CTCTTC 2 cut(s) 1695, 2170
Eco130I CCWWGG 1 cut(s) 169
Eco24I GRGCYC 2 cut(s) 970, 2256
Eco47I GGWCC 2 cut(s) 878, 1876
Eco47III AGCGCT 1 cut(s) 519
Eco57I CTGAAG 2 cut(s) 1527, 1640
EcoO109I RGGNCCY 2 cut(s) 762, 1876
EcoRII CCWGG 5 cut(s) 57, 73, 247, 509, 574
EcoT14I CCWWGG 1 cut(s) 169
EcoT22I ATGCAT 3 cut(s) 331, 832, 2200
EcoT38I GRGCYC 2 cut(s) 970, 2256
ErhI CCWWGG 1 cut(s) 169
Esp3I CGTCTC 1 cut(s) 635
FalI AAGNNNNNCTT 4 cut(s) 455, 487, 1818, 1850
FaqI GGGAC 3 cut(s) 892, 1294, 1889
FauNDI CATATG 1 cut(s) 883
FbaI TGATCA 1 cut(s) 430
Fnu4HI GCNGC 5 cut(s) 516, 797, 2274, 2277, 2315
FokI GGATG 8 cut(s) 305, 420, 493, 519, 1002, 1916, 2066, 2160
FriOI GRGCYC 2 cut(s) 970, 2256
Fsp4HI GCNGC 5 cut(s) 516, 797, 2274, 2277, 2315
FspBI CTAG 4 cut(s) 170, 1520, 2403, 2438
GlaI GCGC 1 cut(s) 519
GluI GCNGC 5 cut(s) 516, 797, 2274, 2277, 2315
GsuI CTGGAG 3 cut(s) 231, 2102, 2346
HaeII RGCGCY 1 cut(s) 521
HaeIII GGCC 4 cut(s) 489, 764, 1539, 2034
HapII CCGG 3 cut(s) 537, 845, 1605
HhaI GCGC 1 cut(s) 520
Hin6I GCGC 1 cut(s) 518
HinP1I GCGC 1 cut(s) 518
HindIII AAGCTT 1 cut(s) 1640
HinfI GANTC 7 cut(s) 230, 242, 277, 905, 1109, 1409, 1960
HpaII CCGG 3 cut(s) 537, 845, 1605
HphI GGTGA 3 cut(s) 281, 1211, 2200
Hpy166II GTNNAC 5 cut(s) 146, 546, 811, 2132, 2435
Hpy188III TCNNGA 9 cut(s) 592, 1417, 1571, 1619, 1627, 1770, 1854, 2015, 2225
Hpy8I GTNNAC 5 cut(s) 146, 546, 811, 2132, 2435
HpyCH4III ACNGT 2 cut(s) 815, 1130
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 344, 353, 802
HpyF3I CTNAG 6 cut(s) 263, 395, 969, 1330, 1372, 2234
HspAI GCGC 1 cut(s) 518
KpnI GGTACC 1 cut(s) 627
Ksp22I TGATCA 1 cut(s) 430
LmnI GCTCC 5 cut(s) 610, 841, 874, 1268, 2327
Lsp1109I GCAGC 5 cut(s) 527, 808, 2260, 2288, 2301
LweI GCATC 7 cut(s) 212, 338, 488, 691, 783, 2185, 2207
MaeI CTAG 4 cut(s) 170, 1520, 2403, 2438
MaeIII GTNAC 2 cut(s) 33, 1199
MboII GAAGA 7 cut(s) 102, 333, 1390, 1709, 1712, 2113, 2187
MfeI CAATTG 1 cut(s) 207
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 3 cut(s) 970, 2256, 2324
MlsI TGGCCA 2 cut(s) 489, 2034
MluNI TGGCCA 2 cut(s) 489, 2034
MlyI GAGTC 2 cut(s) 914, 1118
MmeI TCCRAC 5 cut(s) 270, 800, 1411, 1881, 1972
Mox20I TGGCCA 2 cut(s) 489, 2034
Mph1103I ATGCAT 3 cut(s) 331, 832, 2200
MscI TGGCCA 2 cut(s) 489, 2034
MseI TTAA 4 cut(s) 104, 1355, 1472, 1637
MslI CAYNNNNRTG 4 cut(s) 855, 919, 925, 1012
Msp20I TGGCCA 2 cut(s) 489, 2034
MspA1I CMGCKG 1 cut(s) 2279
MspI CCGG 3 cut(s) 537, 845, 1605
MspR9I CCNGG 7 cut(s) 59, 75, 249, 511, 537, 576, 1606
MunI CAATTG 1 cut(s) 207
Mva1269I GAATGC 2 cut(s) 358, 2110
MvaI CCWGG 5 cut(s) 59, 75, 249, 511, 576
MvnI CGCG 1 cut(s) 1178
MwoI GCNNNNNNNGC 4 cut(s) 335, 344, 353, 802
NciI CCSGG 2 cut(s) 537, 1606
NdeI CATATG 1 cut(s) 883
NlaIV GGNNCC 6 cut(s) 121, 625, 774, 843, 889, 1877
NmuCI GTSAC 1 cut(s) 1199
NsiI ATGCAT 3 cut(s) 331, 832, 2200
NspI RCATGY 4 cut(s) 1017, 1732, 2011, 2217
NspV TTCGAA 1 cut(s) 1804
PagI TCATGA 2 cut(s) 1626, 2224
PciI ACATGT 1 cut(s) 2007
PcsI WCGNNNNNNNCGW 1 cut(s) 387
PctI GAATGC 2 cut(s) 358, 2110
PfeI GAWTC 5 cut(s) 230, 242, 277, 1409, 1960
PflMI CCANNNNNTGG 1 cut(s) 1466
PfoI TCCNGGA 1 cut(s) 535
PkrI GCNGC 5 cut(s) 517, 798, 2275, 2278, 2316
PleI GAGTC 2 cut(s) 913, 1117
PpsI GAGTC 2 cut(s) 913, 1117
PpuMI RGGWCCY 1 cut(s) 1876
PscI ACATGT 1 cut(s) 2007
PshBI ATTAAT 1 cut(s) 104
PsiI TTATAA 1 cut(s) 1548
Psp5II RGGWCCY 1 cut(s) 1876
Psp6I CCWGG 5 cut(s) 57, 73, 247, 509, 574
PspGI CCWGG 5 cut(s) 57, 73, 247, 509, 574
PspN4I GGNNCC 6 cut(s) 121, 625, 774, 843, 889, 1877
PspPI GGNCC 4 cut(s) 762, 878, 1538, 1876
PspPPI RGGWCCY 1 cut(s) 1876
PstI CTGCAG 2 cut(s) 2278, 2319
PsuI RGATCY 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 2279
RsaI GTAC 6 cut(s) 182, 309, 625, 1727, 1833, 1850
RsaNI GTAC 6 cut(s) 181, 308, 624, 1726, 1832, 1849
RseI CAYNNNNRTG 4 cut(s) 855, 919, 925, 1012
SaqAI TTAA 4 cut(s) 104, 1355, 1472, 1637
SatI GCNGC 5 cut(s) 516, 797, 2274, 2277, 2315
Sau96I GGNCC 4 cut(s) 762, 878, 1538, 1876
ScaI AGTACT 3 cut(s) 309, 1833, 1850
SchI GAGTC 2 cut(s) 914, 1118
ScrFI CCNGG 7 cut(s) 59, 75, 249, 511, 537, 576, 1606
SduI GDGCHC 3 cut(s) 970, 2256, 2324
SfaNI GCATC 7 cut(s) 212, 338, 488, 691, 783, 2185, 2207
SfcI CTRYAG 2 cut(s) 2274, 2315
SfuI TTCGAA 1 cut(s) 1804
SinI GGWCC 2 cut(s) 878, 1876
SmiMI CAYNNNNRTG 4 cut(s) 855, 919, 925, 1012
SmlI CTYRAG 2 cut(s) 1852, 2372
SmoI CTYRAG 2 cut(s) 1852, 2372
SsiI CCGC 1 cut(s) 1176
SspI AATATT 2 cut(s) 1243, 1894
SspMI CTAG 4 cut(s) 170, 1520, 2403, 2438
StyD4I CCNGG 7 cut(s) 57, 73, 247, 509, 535, 574, 1604
StyI CCWWGG 1 cut(s) 169
TaaI ACNGT 2 cut(s) 815, 1130
TaqI TCGA 4 cut(s) 1738, 1804, 1953, 2284
TatI WGTACW 4 cut(s) 307, 1725, 1831, 1848
TfiI GAWTC 5 cut(s) 230, 242, 277, 1409, 1960
Tru1I TTAA 4 cut(s) 104, 1355, 1472, 1637
Tru9I TTAA 4 cut(s) 104, 1355, 1472, 1637
TscAI CASTG 5 cut(s) 94, 205, 1014, 1432, 2329
TseFI GTSAC 1 cut(s) 1199
TseI GCWGC 5 cut(s) 515, 796, 2273, 2276, 2314
Tsp45I GTSAC 1 cut(s) 1199
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 5 cut(s) 94, 205, 1014, 1432, 2329
Van91I CCANNNNNTGG 1 cut(s) 1466
VpaK11BI GGWCC 2 cut(s) 878, 1876
VspI ATTAAT 1 cut(s) 104
XapI RAATTY 8 cut(s) 151, 161, 660, 673, 950, 1382, 1774, 1923
XceI RCATGY 4 cut(s) 1017, 1732, 2011, 2217
XmaJI CCTAGG 1 cut(s) 169
XspI CTAG 4 cut(s) 170, 1520, 2403, 2438
ZrmI AGTACT 3 cut(s) 309, 1833, 1850
Zsp2I ATGCAT 3 cut(s) 331, 832, 2200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.