Rh1BG062700

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000114
Physical Location & Seq
Reverse (-)
9277240 .. 9280778
3539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG062700.1

Sequence Viewer

Length: 2046 bp
ATGAACCTTTTTTTCCTTCCTCTGTCTCACTGTTTCCGAATGGGGTGGCTCTTGTGTTACCTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTGCCAAGACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATCCCCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGTTTCTCCGGGTTTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATAACGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCGGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGATCCTAAAGTACCAGTTCAGTCCTTTGTCTGGAAGGAAACTACTCCGTATGCTAGAAGTTCTGTGTACGTTGGCCAGGATACAAGAACACAGTTTCAAAATCCGGGTGGAACTGCGTTTTTCTATTCATACAACTTTGATGTTGATGAGGTTTATCTTACTTGCAGTGTCTCGGATAGCTCAGTAAAATGGAGGGCCTGGTTGGATCCCACGGGGCAACTTAAACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGAAGCAGGGAATTCATGGCCCGTTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTTTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGGGACAGATGGAAGTAATATTGGGACTTGTTTGGCATGGTTTGGCGAATTACTGGATCTAGCAGAGAATAAAACTTATGGTGCAAATGATATTTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCAGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAGGGTAAGCAGAATATAAGTAATGTTAGTGCAGGAGGTGGGAAGAATGATACAGAATTACCACTCTTCAGTTTAAGGAGTATGCTAGCTGCTACAAACAACTTCTCTGAAGCGAATAAGCTTGGAGAGGGGGGGTTCGGCCCTGTTTATAAGGGAATTTTGCCAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGTTGTATGGAAGGAGATGAAATGATATTGATCTATGAATACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATGCCTTTGAAAAGACAAAGTTAGATTGGGATACACGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTACTATATATCCACAAGTACTCTAGATTGAAAATCATCCACAGAGATCTAAAAGCAAGCAATGTTCTGTTGGACGGAACAATGAACCCCAAAGTGTCTGACTTTGGAATGGCGAGAATTTTTGACATAAATCAAATTGAAGCAAATACTAACAAGGTTGTTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

681

Amino Acids

75.86

Weight (kDa)

8.61

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 185 1.5e-29 D-mannose binding lectin
S_locus_glycop PF00954 242 - 329 4.1e-15 S-locus glycoprotein domain
PAN_2 PF08276 358 - 419 5.1e-14 PAN-like domain
Pkinase PF00069 517 - 680 2.8e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 519 - 666 1.3e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1593
Acc36I ACCTGC 1 cut(s) 110
AccB1I GGYRCC 1 cut(s) 540
AccI GTMKAC 1 cut(s) 223
AciI CCGC 4 cut(s) 463, 912, 1004, 1351
AclWI GGATC 7 cut(s) 345, 563, 596, 800, 813, 1113, 1260
AcoI YGGCCR 3 cut(s) 529, 673, 1623
AcsI RAATTY 6 cut(s) 199, 841, 871, 1599, 1796, 1992
AcuI CTGAAG 2 cut(s) 1495, 1572
AcyI GRCGYC 1 cut(s) 541
AdeI CACNNNGTG 1 cut(s) 459
AfaI GTAC 7 cut(s) 100, 120, 612, 668, 1177, 1878, 1895
AfeI AGCGCT 1 cut(s) 561
AfiI CCNNNNNNNGG 6 cut(s) 151, 578, 630, 1003, 1350, 1632
AflIII ACRYGT 2 cut(s) 1049, 1773
AjnI CCWGG 5 cut(s) 121, 496, 551, 675, 797
AjuI GAANNNNNNNTTGG 2 cut(s) 1418, 1450
AloI GAACNNNNNNTCC 2 cut(s) 417, 449
AluBI AGCT 9 cut(s) 266, 441, 468, 513, 780, 1084, 1181, 1532, 1564
AluI AGCT 9 cut(s) 266, 441, 468, 513, 780, 1084, 1181, 1532, 1564
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 3 cut(s) 30, 775, 1378
AlwI GGATC 7 cut(s) 345, 563, 596, 800, 813, 1113, 1260
AlwNI CAGNNNCTG 1 cut(s) 1026
Aor51HI AGCGCT 1 cut(s) 561
AoxI GGCC 6 cut(s) 529, 673, 795, 878, 1582, 1623
ApeKI GCWGC 5 cut(s) 557, 1026, 1379, 1382, 1532
ApoI RAATTY 6 cut(s) 199, 841, 871, 1599, 1796, 1992
AspLEI GCGC 2 cut(s) 543, 562
AspS9I GGNCC 7 cut(s) 168, 795, 879, 914, 1017, 1353, 1583
AsuC2I CCSGG 3 cut(s) 294, 579, 705
AsuHPI GGTGA 4 cut(s) 580, 945, 950, 1105
AsuII TTCGAA 1 cut(s) 1849
AsuNHI GCTAGC 1 cut(s) 1528
AvaII GGWCC 4 cut(s) 168, 914, 1017, 1353
BalI TGGCCA 3 cut(s) 531, 675, 1625
BamHI GGATCC 1 cut(s) 805
BanI GGYRCC 1 cut(s) 540
Bbv12I GWGCWC 1 cut(s) 75
BbvI GCAGC 5 cut(s) 569, 1013, 1391, 1394, 1519
BccI CCATC 2 cut(s) 311, 1199
BceAI ACGGC 1 cut(s) 1075
BciT130I CCWGG 5 cut(s) 123, 498, 553, 677, 799
BciVI GTATCC 2 cut(s) 673, 1831
BcnI CCSGG 3 cut(s) 294, 579, 705
BcoDI GTCTC 3 cut(s) 30, 775, 1378
BfaI CTAG 8 cut(s) 345, 413, 654, 846, 1256, 1316, 1529, 1899
BfmI CTRYAG 1 cut(s) 1377
BfoI RGCGCY 2 cut(s) 544, 563
BfuAI ACCTGC 1 cut(s) 110
BfuI GTATCC 2 cut(s) 673, 1831
BglII AGATCT 1 cut(s) 1921
BisI GCNGC 5 cut(s) 558, 1027, 1380, 1383, 1533
BlpI GCTNAGC 1 cut(s) 308
BlsI GCNGC 5 cut(s) 559, 1028, 1381, 1384, 1534
BmcAI AGTACT 2 cut(s) 1878, 1895
Bme1390I CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
Bme18I GGWCC 4 cut(s) 168, 914, 1017, 1353
BmgT120I GGNCC 7 cut(s) 168, 795, 879, 914, 1017, 1353, 1583
BmiI GGNNCC 6 cut(s) 169, 542, 807, 916, 1309, 1355
BmrFI CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
BmsI GCATC 2 cut(s) 380, 1798
BmtI GCTAGC 1 cut(s) 1532
BplI GAGNNNNNCTC 2 cut(s) 1133, 1165
BpmI CTGGAG 1 cut(s) 1685
Bpu1102I GCTNAGC 1 cut(s) 308
Bpu14I TTCGAA 1 cut(s) 1849
BpuEI CTTGAG 1 cut(s) 1854
BpuMI CCSGG 3 cut(s) 294, 579, 705
BsaBI GATNNNNATC 2 cut(s) 321, 1760
BsaHI GRCGYC 1 cut(s) 541
BsaJI CCNNGG 4 cut(s) 163, 217, 552, 810
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 578, 630, 1003, 1350, 1632
Bse1I ACTGG 6 cut(s) 409, 532, 614, 976, 1020, 1254
Bse3DI GCAATG 3 cut(s) 396, 907, 1942
Bse8I GATNNNNATC 2 cut(s) 321, 1760
BseBI CCWGG 5 cut(s) 123, 498, 553, 677, 799
BseDI CCNNGG 4 cut(s) 163, 217, 552, 810
BseGI GGATG 4 cut(s) 371, 475, 548, 1911
BseJI GATNNNNATC 2 cut(s) 321, 1760
BseLI CCNNNNNNNGG 6 cut(s) 151, 578, 630, 1003, 1350, 1632
BseMI GCAATG 3 cut(s) 396, 907, 1942
BseMII CTCAG 3 cut(s) 322, 428, 795
BseNI ACTGG 6 cut(s) 409, 532, 614, 976, 1020, 1254
BseXI GCAGC 5 cut(s) 569, 1013, 1391, 1394, 1519
BsgI GTGCAG 1 cut(s) 1494
BshFI GGCC 6 cut(s) 531, 675, 797, 880, 1584, 1625
BshNI GGYRCC 1 cut(s) 540
BsiHKAI GWGCWC 1 cut(s) 75
BsiSI CCGG 4 cut(s) 293, 579, 704, 1103
BslFI GGGAC 4 cut(s) 181, 900, 1213, 1234
BslI CCNNNNNNNGG 6 cut(s) 151, 578, 630, 1003, 1350, 1632
BsmAI GTCTC 3 cut(s) 30, 775, 1378
BsmFI GGGAC 4 cut(s) 181, 900, 1213, 1234
BsmI GAATGC 1 cut(s) 1160
BsnI GGCC 6 cut(s) 531, 675, 797, 880, 1584, 1625
Bsp119I TTCGAA 1 cut(s) 1849
Bsp1286I GDGCHC 1 cut(s) 75
Bsp1407I TGTACA 1 cut(s) 1175
Bsp143I GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
Bsp1720I GCTNAGC 1 cut(s) 308
BspACI CCGC 4 cut(s) 463, 912, 1004, 1351
BspANI GGCC 6 cut(s) 531, 675, 797, 880, 1584, 1625
BspCNI CTCAG 3 cut(s) 321, 429, 794
BspHI TCATGA 1 cut(s) 1663
BspLI GGNNCC 6 cut(s) 169, 542, 807, 916, 1309, 1355
BspMAI CTGCAG 1 cut(s) 1381
BspMI ACCTGC 1 cut(s) 110
BspOI GCTAGC 1 cut(s) 1532
BspPI GGATC 7 cut(s) 345, 563, 596, 800, 813, 1113, 1260
BspT104I TTCGAA 1 cut(s) 1849
BspT107I GGYRCC 1 cut(s) 540
BsrDI GCAATG 3 cut(s) 396, 907, 1942
BsrGI TGTACA 1 cut(s) 1175
BsrI ACTGG 6 cut(s) 409, 532, 614, 976, 1020, 1254
BssECI CCNNGG 4 cut(s) 163, 217, 552, 810
BssMI GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
BssNAI GTATAC 1 cut(s) 224
BssNI GRCGYC 1 cut(s) 541
BssT1I CCWWGG 2 cut(s) 163, 217
Bst1107I GTATAC 1 cut(s) 224
Bst2UI CCWGG 5 cut(s) 123, 498, 553, 677, 799
Bst4CI ACNGT 4 cut(s) 32, 70, 693, 1169
Bst6I CTCTTC 1 cut(s) 1514
BstACI GRCGYC 1 cut(s) 541
BstAUI TGTACA 1 cut(s) 1175
BstBI TTCGAA 1 cut(s) 1849
BstC8I GCNNGC 3 cut(s) 1160, 1530, 1933
BstDEI CTNAG 3 cut(s) 308, 437, 781
BstDSI CCRYGG 1 cut(s) 810
BstEII GGTNACC 1 cut(s) 140
BstF5I GGATG 4 cut(s) 371, 475, 548, 1911
BstH2I RGCGCY 2 cut(s) 544, 563
BstHHI GCGC 2 cut(s) 543, 562
BstKTI GATC 9 cut(s) 340, 475, 571, 604, 808, 1108, 1255, 1764, 1924
BstMAI GTCTC 3 cut(s) 30, 775, 1378
BstMBI GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
BstMWI GCNNNNNNNGC 1 cut(s) 835
BstNI CCWGG 5 cut(s) 123, 498, 553, 677, 799
BstNSI RCATGY 2 cut(s) 1053, 1777
BstPI GGTNACC 1 cut(s) 140
BstSCI CCNGG 8 cut(s) 121, 292, 496, 551, 577, 675, 703, 797
BstSFI CTRYAG 1 cut(s) 1377
BstV1I GCAGC 5 cut(s) 569, 1013, 1391, 1394, 1519
BstX2I RGATCY 4 cut(s) 601, 805, 1252, 1921
BstYI RGATCY 4 cut(s) 601, 805, 1252, 1921
BstZ17I GTATAC 1 cut(s) 224
BsuI GTATCC 2 cut(s) 673, 1831
BsuRI GGCC 6 cut(s) 531, 675, 797, 880, 1584, 1625
BtgI CCRYGG 1 cut(s) 810
BtsCI GGATG 4 cut(s) 371, 475, 548, 1911
BtsI GCAGTG 2 cut(s) 319, 772
BtsIMutI CAGTG 6 cut(s) 28, 75, 142, 319, 772, 1027
BveI ACCTGC 1 cut(s) 110
Cac8I GCNNGC 3 cut(s) 1160, 1530, 1933
CaiI CAGNNNCTG 1 cut(s) 1026
CciI TCATGA 1 cut(s) 1663
CfoI GCGC 2 cut(s) 543, 562
Cfr13I GGNCC 7 cut(s) 168, 795, 879, 914, 1017, 1353, 1583
Csp6I GTAC 7 cut(s) 99, 119, 611, 667, 1176, 1877, 1894
CviAII CATG 7 cut(s) 876, 957, 1050, 1233, 1304, 1664, 1774
CviQI GTAC 7 cut(s) 99, 119, 611, 667, 1176, 1877, 1894
DdeI CTNAG 3 cut(s) 308, 437, 781
DinI GGCGCC 1 cut(s) 542
DpnI GATC 9 cut(s) 339, 474, 570, 603, 807, 1107, 1254, 1763, 1923
DpnII GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
DraIII CACNNNGTG 1 cut(s) 459
EaeI YGGCCR 3 cut(s) 529, 673, 1623
Eam1104I CTCTTC 1 cut(s) 1514
EarI CTCTTC 1 cut(s) 1514
EciI GGCGGA 1 cut(s) 478
Eco130I CCWWGG 2 cut(s) 163, 217
Eco32I GATATC 1 cut(s) 889
Eco47I GGWCC 4 cut(s) 168, 914, 1017, 1353
Eco47III AGCGCT 1 cut(s) 561
Eco57I CTGAAG 2 cut(s) 1495, 1572
Eco91I GGTNACC 1 cut(s) 140
EcoO109I RGGNCCY 2 cut(s) 168, 795
EcoO65I GGTNACC 1 cut(s) 140
EcoRI GAATTC 2 cut(s) 841, 871
EcoRII CCWGG 5 cut(s) 121, 496, 551, 675, 797
EcoRV GATATC 1 cut(s) 889
EcoT14I CCWWGG 2 cut(s) 163, 217
EgeI GGCGCC 1 cut(s) 542
EheI GGCGCC 1 cut(s) 542
ErhI CCWWGG 2 cut(s) 163, 217
FaeI CATG 7 cut(s) 879, 960, 1053, 1236, 1307, 1667, 1777
FalI AAGNNNNNCTT 4 cut(s) 497, 529, 575, 607
FaqI GGGAC 4 cut(s) 181, 900, 1213, 1234
FatI CATG 7 cut(s) 875, 956, 1049, 1232, 1303, 1663, 1773
FblI GTMKAC 1 cut(s) 223
Fnu4HI GCNGC 5 cut(s) 558, 1027, 1380, 1383, 1533
FokI GGATG 4 cut(s) 358, 462, 535, 1898
Fsp4HI GCNGC 5 cut(s) 558, 1027, 1380, 1383, 1533
FspBI CTAG 8 cut(s) 345, 413, 654, 846, 1256, 1316, 1529, 1899
GlaI GCGC 2 cut(s) 542, 561
GluI GCNGC 5 cut(s) 558, 1027, 1380, 1383, 1533
GsuI CTGGAG 1 cut(s) 1685
HaeII RGCGCY 2 cut(s) 544, 563
HaeIII GGCC 6 cut(s) 531, 675, 797, 880, 1584, 1625
HapII CCGG 4 cut(s) 293, 579, 704, 1103
HhaI GCGC 2 cut(s) 543, 562
Hin1I GRCGYC 1 cut(s) 541
Hin1II CATG 7 cut(s) 879, 960, 1053, 1236, 1307, 1667, 1777
Hin6I GCGC 2 cut(s) 541, 560
HinP1I GCGC 2 cut(s) 541, 560
HincII GTYRAC 2 cut(s) 363, 1047
HindII GTYRAC 2 cut(s) 363, 1047
HindIII AAGCTT 2 cut(s) 1082, 1562
HinfI GANTC 4 cut(s) 228, 275, 394, 1148
HpaII CCGG 4 cut(s) 293, 579, 704, 1103
HphI GGTGA 4 cut(s) 580, 945, 950, 1105
Hpy166II GTNNAC 6 cut(s) 224, 363, 588, 667, 941, 1047
Hpy188III TCNNGA 6 cut(s) 194, 631, 1616, 1664, 1672, 1899
Hpy8I GTNNAC 6 cut(s) 224, 363, 588, 667, 941, 1047
HpyAV CCTTC 5 cut(s) 26, 601, 628, 1438, 1736
HpyCH4III ACNGT 4 cut(s) 32, 70, 693, 1169
HpyCH4IV ACGT 2 cut(s) 669, 854
HpyCH4V TGCA 9 cut(s) 251, 389, 765, 960, 1029, 1280, 1367, 1379, 1475
HpyF10VI GCNNNNNNNGC 1 cut(s) 835
HpyF3I CTNAG 3 cut(s) 308, 437, 781
HpySE526I ACGT 2 cut(s) 669, 854
Hsp92I GRCGYC 1 cut(s) 541
Hsp92II CATG 7 cut(s) 879, 960, 1053, 1236, 1307, 1667, 1777
HspAI GCGC 2 cut(s) 541, 560
KasI GGCGCC 1 cut(s) 540
Kzo9I GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
LmnI GCTCC 2 cut(s) 465, 1313
Lsp1109I GCAGC 5 cut(s) 569, 1013, 1391, 1394, 1519
LweI GCATC 2 cut(s) 380, 1798
MaeI CTAG 8 cut(s) 345, 413, 654, 846, 1256, 1316, 1529, 1899
MaeII ACGT 2 cut(s) 669, 854
MaeIII GTNAC 7 cut(s) 56, 64, 140, 451, 1055, 1070, 1145
MalI GATC 9 cut(s) 339, 474, 570, 603, 807, 1107, 1254, 1763, 1923
MboI GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
MboII GAAGA 6 cut(s) 150, 178, 458, 1438, 1498, 1501
MflI RGATCY 4 cut(s) 601, 805, 1252, 1921
MhlI GDGCHC 1 cut(s) 75
MlsI TGGCCA 3 cut(s) 531, 675, 1625
MluNI TGGCCA 3 cut(s) 531, 675, 1625
Mly113I GGCGCC 1 cut(s) 541
MlyI GAGTC 1 cut(s) 1142
MmeI TCCRAC 6 cut(s) 315, 783, 840, 1369, 1926, 2017
MnlI CCTC 9 cut(s) 30, 409, 490, 742, 786, 929, 1472, 1564, 1626
Mox20I TGGCCA 3 cut(s) 531, 675, 1625
MscI TGGCCA 3 cut(s) 531, 675, 1625
MseI TTAA 4 cut(s) 504, 822, 1338, 1517
MslI CAYNNNNRTG 4 cut(s) 135, 256, 955, 961
Msp20I TGGCCA 3 cut(s) 531, 675, 1625
MspI CCGG 4 cut(s) 293, 579, 704, 1103
MspR9I CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
Mva1269I GAATGC 1 cut(s) 1160
MvaI CCWGG 5 cut(s) 123, 498, 553, 677, 799
MwoI GCNNNNNNNGC 1 cut(s) 835
NarI GGCGCC 1 cut(s) 541
NciI CCSGG 3 cut(s) 294, 579, 705
NdeII GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
NheI GCTAGC 1 cut(s) 1528
NlaIII CATG 7 cut(s) 879, 960, 1053, 1236, 1307, 1667, 1777
NlaIV GGNNCC 6 cut(s) 169, 542, 807, 916, 1309, 1355
NmuCI GTSAC 2 cut(s) 451, 1145
NspI RCATGY 2 cut(s) 1053, 1777
NspV TTCGAA 1 cut(s) 1849
PagI TCATGA 1 cut(s) 1663
PciI ACATGT 2 cut(s) 1049, 1773
PctI GAATGC 1 cut(s) 1160
PfeI GAWTC 3 cut(s) 228, 275, 394
PkrI GCNGC 5 cut(s) 559, 1028, 1381, 1384, 1534
PleI GAGTC 1 cut(s) 1142
PluTI GGCGCC 1 cut(s) 544
PpsI GAGTC 1 cut(s) 1142
PpuMI RGGWCCY 1 cut(s) 168
PscI ACATGT 2 cut(s) 1049, 1773
PsiI TTATAA 1 cut(s) 1593
Psp5II RGGWCCY 1 cut(s) 168
Psp6I CCWGG 5 cut(s) 121, 496, 551, 675, 797
PspEI GGTNACC 1 cut(s) 140
PspGI CCWGG 5 cut(s) 121, 496, 551, 675, 797
PspN4I GGNNCC 6 cut(s) 169, 542, 807, 916, 1309, 1355
PspPI GGNCC 7 cut(s) 168, 795, 879, 914, 1017, 1353, 1583
PspPPI RGGWCCY 1 cut(s) 168
PstI CTGCAG 1 cut(s) 1381
PstNI CAGNNNCTG 1 cut(s) 1026
PsuI RGATCY 4 cut(s) 601, 805, 1252, 1921
RsaI GTAC 7 cut(s) 100, 120, 612, 668, 1177, 1878, 1895
RsaNI GTAC 7 cut(s) 99, 119, 611, 667, 1176, 1877, 1894
RseI CAYNNNNRTG 4 cut(s) 135, 256, 955, 961
SaqAI TTAA 4 cut(s) 504, 822, 1338, 1517
SatI GCNGC 5 cut(s) 558, 1027, 1380, 1383, 1533
Sau3AI GATC 9 cut(s) 337, 472, 568, 601, 805, 1105, 1252, 1761, 1921
Sau96I GGNCC 7 cut(s) 168, 795, 879, 914, 1017, 1353, 1583
ScaI AGTACT 2 cut(s) 1878, 1895
SchI GAGTC 1 cut(s) 1142
ScrFI CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
SduI GDGCHC 1 cut(s) 75
SfaNI GCATC 2 cut(s) 380, 1798
SfcI CTRYAG 1 cut(s) 1377
SfoI GGCGCC 1 cut(s) 542
SfuI TTCGAA 1 cut(s) 1849
SinI GGWCC 4 cut(s) 168, 914, 1017, 1353
SmiMI CAYNNNNRTG 4 cut(s) 135, 256, 955, 961
SmlI CTYRAG 1 cut(s) 1869
SmoI CTYRAG 1 cut(s) 1869
SsiI CCGC 4 cut(s) 463, 912, 1004, 1351
SspDI GGCGCC 1 cut(s) 540
SspI AATATT 1 cut(s) 1216
SspMI CTAG 8 cut(s) 345, 413, 654, 846, 1256, 1316, 1529, 1899
StyD4I CCNGG 8 cut(s) 121, 292, 496, 551, 577, 675, 703, 797
StyI CCWWGG 2 cut(s) 163, 217
TaaI ACNGT 4 cut(s) 32, 70, 693, 1169
TaiI ACGT 2 cut(s) 672, 857
TaqI TCGA 3 cut(s) 471, 1783, 1849
TatI WGTACW 3 cut(s) 1175, 1876, 1893
TfiI GAWTC 3 cut(s) 228, 275, 394
Tru1I TTAA 4 cut(s) 504, 822, 1338, 1517
Tru9I TTAA 4 cut(s) 504, 822, 1338, 1517
TscAI CASTG 6 cut(s) 35, 75, 142, 319, 772, 1027
TseFI GTSAC 2 cut(s) 451, 1145
TseI GCWGC 5 cut(s) 557, 1026, 1379, 1382, 1532
Tsp45I GTSAC 2 cut(s) 451, 1145
TspDTI ATGAA 9 cut(s) 17, 165, 407, 717, 864, 1292, 1764, 1782, 1973
TspGWI ACGGA 5 cut(s) 364, 438, 636, 1324, 1965
TspRI CASTG 6 cut(s) 35, 75, 142, 319, 772, 1027
VpaK11BI GGWCC 4 cut(s) 168, 914, 1017, 1353
XapI RAATTY 6 cut(s) 199, 841, 871, 1599, 1796, 1992
XbaI TCTAGA 1 cut(s) 1898
XceI RCATGY 2 cut(s) 1053, 1777
XmiI GTMKAC 1 cut(s) 223
XspI CTAG 8 cut(s) 345, 413, 654, 846, 1256, 1316, 1529, 1899
ZrmI AGTACT 2 cut(s) 1878, 1895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.