Rh1AG094400

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000114
Physical Location & Seq
Forward (+)
16438571 .. 16439899
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG094400.1

Sequence Viewer

Length: 1329 bp
ATGGGGTGGCTCTTGTGTTACCTTGTAACACTGCTCTTATCTCACATCCTCTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAATATATCAGTGGTAACATGACTTTGGTTTCTTCCTTTGAGACCTTTTCATTAGGCTTCTTCAATCCTAATGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCCCAAATACTGCATCAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGTAGCGATGGAAATCTTGTGGTGTTGGATCAGGCTAAAAAACTTGTCTGGTCAACTAATGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGATGTCACTTTATGGCAGAGCTTCGATCATCCCTGTGATACTATGTTGCCTGGCATGAAGATTAGCTTGAACAAAAAGACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTGGGCATAGATCCTAAAGTACCAGTTCAGGCCTTTATCTGGAAGGAAACTACTCCAATACAAAGAAGTCCTCTGTACATTGGCAAGGATATAAGAACAGCGTTTCAAAATCCAGGTGGAACGGCGTTTTTCCTTTCATACAACTTTGATGTTGATGATGTTTATCTTACTTACATTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCTACAGGGCTAGTTAAATTGCAGTTCTGGCAGAATTCTAGTAAAACGTGGTTGGAACAAGGGACTTCACCGCCCGTTCATAACTGTGATTTTTATGCTTATTGCGGTCCCAATAGTGCCTGTCGTAGTGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCAGTGGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTAACTTTTCAAAGATTGAAAAGGTGAAACTGCCGGATCATTCTGTACTGTTAAACAATAGGAGTATGAACGAGTGTGAATCTGAATGTCGGCGGAACTGTTCTTGCACGGCTTATGCTTATGTATATGCGACAGATGGAAGTAATATTGGGACATGCTTGGCATGGTTTGGCAAATTACTGGATCTAGTAGAGAATTTTAACAACTCTAGACATGATATCTATTTTCGTGTTCATGGCTCCGAACTAGGTATGTATTTCGTTTTTTGCTATTTTCTTTATGGATGTGTGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

442

Amino Acids

49.44

Weight (kDa)

6.64

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 173 2.3e-32 D-mannose binding lectin
S_locus_glycop PF00954 234 - 317 1.5e-16 S-locus glycoprotein domain
PAN_2 PF08276 345 - 407 2e-14 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 504
AccI GTMKAC 1 cut(s) 187
AciI CCGC 3 cut(s) 842, 876, 1126
AclWI GGATC 7 cut(s) 309, 527, 560, 764, 777, 1077, 1224
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 4 cut(s) 163, 200, 805, 1228
AcyI GRCGYC 1 cut(s) 505
AfaI GTAC 5 cut(s) 61, 81, 576, 632, 1080
AfiI CCNNNNNNNGG 2 cut(s) 542, 594
AflIII ACRYGT 1 cut(s) 1013
AgsI TTSAA 7 cut(s) 151, 196, 410, 481, 662, 1044, 1052
AjnI CCWGG 4 cut(s) 82, 460, 515, 667
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
AluBI AGCT 5 cut(s) 230, 405, 432, 477, 744
AluI AGCT 5 cut(s) 230, 405, 432, 477, 744
Alw26I GTCTC 2 cut(s) 122, 739
AlwI GGATC 7 cut(s) 309, 527, 560, 764, 777, 1077, 1224
AlwNI CAGNNNCTG 1 cut(s) 990
AoxI GGCC 2 cut(s) 493, 585
ApeKI GCWGC 2 cut(s) 521, 990
ApoI RAATTY 4 cut(s) 163, 200, 805, 1228
AspLEI GCGC 2 cut(s) 507, 526
AspS9I GGNCC 2 cut(s) 878, 981
AsuC2I CCSGG 2 cut(s) 258, 543
AsuHPI GGTGA 5 cut(s) 544, 831, 909, 914, 1069
AvaII GGWCC 2 cut(s) 878, 981
BalI TGGCCA 1 cut(s) 495
BamHI GGATCC 1 cut(s) 769
BanI GGYRCC 1 cut(s) 504
BbvI GCAGC 2 cut(s) 508, 977
BccI CCATC 2 cut(s) 275, 1163
BceAI ACGGC 3 cut(s) 693, 1039, 1158
BciT130I CCWGG 4 cut(s) 84, 462, 517, 669
BciVI GTATCC 1 cut(s) 376
BcnI CCSGG 2 cut(s) 258, 543
BcoDI GTCTC 2 cut(s) 122, 739
BfaI CTAG 6 cut(s) 377, 782, 810, 1220, 1242, 1280
BfmI CTRYAG 1 cut(s) 774
BfoI RGCGCY 1 cut(s) 508
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 1 cut(s) 376
BisI GCNGC 2 cut(s) 522, 991
BlsI GCNGC 2 cut(s) 523, 992
Bme1390I CCNGG 6 cut(s) 84, 258, 462, 517, 543, 669
Bme18I GGWCC 2 cut(s) 878, 981
BmgT120I GGNCC 2 cut(s) 878, 981
BmiI GGNNCC 4 cut(s) 506, 771, 880, 1273
BmrFI CCNGG 6 cut(s) 84, 258, 462, 517, 543, 669
BmsI GCATC 2 cut(s) 224, 344
BpuMI CCSGG 2 cut(s) 258, 543
BsaBI GATNNNNATC 2 cut(s) 285, 717
BsaHI GRCGYC 1 cut(s) 505
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 3 cut(s) 181, 516, 555
BsaWI WCCGGW 1 cut(s) 386
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 594
Bse1I ACTGG 6 cut(s) 373, 496, 578, 940, 984, 1218
Bse3DI GCAATG 1 cut(s) 360
Bse8I GATNNNNATC 2 cut(s) 285, 717
BseBI CCWGG 4 cut(s) 84, 462, 517, 669
BseDI CCNNGG 3 cut(s) 181, 516, 555
BseGI GGATG 5 cut(s) 45, 335, 439, 512, 1322
BseJI GATNNNNATC 2 cut(s) 285, 717
BseLI CCNNNNNNNGG 2 cut(s) 542, 594
BseMI GCAATG 1 cut(s) 360
BseMII CTCAG 3 cut(s) 286, 392, 759
BseNI ACTGG 6 cut(s) 373, 496, 578, 940, 984, 1218
BseXI GCAGC 2 cut(s) 508, 977
BshFI GGCC 2 cut(s) 495, 587
BshNI GGYRCC 1 cut(s) 504
BsiSI CCGG 4 cut(s) 257, 387, 543, 1067
BslFI GGGAC 3 cut(s) 847, 864, 1198
BslI CCNNNNNNNGG 2 cut(s) 542, 594
BsmAI GTCTC 2 cut(s) 122, 739
BsmFI GGGAC 3 cut(s) 847, 864, 1198
BsnI GGCC 2 cut(s) 495, 587
Bso31I GGTCTC 1 cut(s) 122
Bsp1407I TGTACA 1 cut(s) 630
Bsp143I GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
BspACI CCGC 3 cut(s) 842, 876, 1126
BspANI GGCC 2 cut(s) 495, 587
BspCNI CTCAG 3 cut(s) 285, 393, 758
BspLI GGNNCC 4 cut(s) 506, 771, 880, 1273
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 7 cut(s) 309, 527, 560, 764, 777, 1077, 1224
BspT107I GGYRCC 1 cut(s) 504
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 360
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 6 cut(s) 373, 496, 578, 940, 984, 1218
BssECI CCNNGG 3 cut(s) 181, 516, 555
BssMI GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
BssNAI GTATAC 1 cut(s) 188
BssNI GRCGYC 1 cut(s) 505
BssT1I CCWWGG 2 cut(s) 181, 555
Bst1107I GTATAC 1 cut(s) 188
Bst2UI CCWGG 4 cut(s) 84, 462, 517, 669
Bst4CI ACNGT 3 cut(s) 857, 1083, 1133
BstACI GRCGYC 1 cut(s) 505
BstAUI TGTACA 1 cut(s) 630
BstDEI CTNAG 3 cut(s) 272, 401, 745
BstF5I GGATG 5 cut(s) 45, 335, 439, 512, 1322
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 2 cut(s) 507, 526
BstKTI GATC 7 cut(s) 304, 439, 535, 568, 772, 1072, 1219
BstMAI GTCTC 2 cut(s) 122, 739
BstMBI GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
BstMWI GCNNNNNNNGC 1 cut(s) 799
BstNI CCWGG 4 cut(s) 84, 462, 517, 669
BstNSI RCATGY 2 cut(s) 1017, 1191
BstSCI CCNGG 6 cut(s) 82, 256, 460, 515, 541, 667
BstSFI CTRYAG 1 cut(s) 774
BstV1I GCAGC 2 cut(s) 508, 977
BstX2I RGATCY 3 cut(s) 565, 769, 1216
BstYI RGATCY 3 cut(s) 565, 769, 1216
BstZ17I GTATAC 1 cut(s) 188
BsuI GTATCC 1 cut(s) 376
BsuRI GGCC 2 cut(s) 495, 587
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 5 cut(s) 45, 335, 439, 512, 1322
BtsI GCAGTG 2 cut(s) 29, 975
BtsIMutI CAGTG 4 cut(s) 29, 103, 975, 991
BveI ACCTGC 1 cut(s) 71
CaiI CAGNNNCTG 1 cut(s) 990
CfoI GCGC 2 cut(s) 507, 526
Cfr13I GGNCC 2 cut(s) 878, 981
Csp6I GTAC 5 cut(s) 60, 80, 575, 631, 1079
CviAII CATG 8 cut(s) 106, 466, 921, 1014, 1188, 1197, 1247, 1268
CviQI GTAC 5 cut(s) 60, 80, 575, 631, 1079
DdeI CTNAG 3 cut(s) 272, 401, 745
DinI GGCGCC 1 cut(s) 506
DpnI GATC 7 cut(s) 303, 438, 534, 567, 771, 1071, 1218
DpnII GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
EaeI YGGCCR 1 cut(s) 493
EciI GGCGGA 1 cut(s) 1141
Eco130I CCWWGG 2 cut(s) 181, 555
Eco147I AGGCCT 1 cut(s) 587
Eco31I GGTCTC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 1252
Eco47I GGWCC 2 cut(s) 878, 981
EcoRI GAATTC 1 cut(s) 805
EcoRII CCWGG 4 cut(s) 82, 460, 515, 667
EcoRV GATATC 1 cut(s) 1252
EcoT14I CCWWGG 2 cut(s) 181, 555
EcoT22I ATGCAT 1 cut(s) 337
EgeI GGCGCC 1 cut(s) 506
EheI GGCGCC 1 cut(s) 506
ErhI CCWWGG 2 cut(s) 181, 555
FaeI CATG 8 cut(s) 109, 469, 924, 1017, 1191, 1200, 1250, 1271
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 539, 571
FaqI GGGAC 3 cut(s) 847, 864, 1198
FatI CATG 8 cut(s) 105, 465, 920, 1013, 1187, 1196, 1246, 1267
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 2 cut(s) 522, 991
FokI GGATG 4 cut(s) 32, 322, 426, 499
Fsp4HI GCNGC 2 cut(s) 522, 991
FspBI CTAG 6 cut(s) 377, 782, 810, 1220, 1242, 1280
GlaI GCGC 2 cut(s) 506, 525
GluI GCNGC 2 cut(s) 522, 991
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 2 cut(s) 495, 587
HapII CCGG 4 cut(s) 257, 387, 543, 1067
HhaI GCGC 2 cut(s) 507, 526
Hin1I GRCGYC 1 cut(s) 505
Hin1II CATG 8 cut(s) 109, 469, 924, 1017, 1191, 1200, 1250, 1271
Hin6I GCGC 2 cut(s) 505, 524
HinP1I GCGC 2 cut(s) 505, 524
HincII GTYRAC 2 cut(s) 327, 1011
HindII GTYRAC 2 cut(s) 327, 1011
HinfI GANTC 5 cut(s) 192, 239, 251, 358, 1112
HpaII CCGG 4 cut(s) 257, 387, 543, 1067
HphI GGTGA 5 cut(s) 544, 831, 909, 914, 1069
Hpy166II GTNNAC 5 cut(s) 188, 327, 552, 905, 1011
Hpy188I TCNGA 5 cut(s) 402, 739, 957, 1117, 1276
Hpy188III TCNNGA 2 cut(s) 595, 1242
Hpy8I GTNNAC 5 cut(s) 188, 327, 552, 905, 1011
HpyAV CCTTC 1 cut(s) 592
HpyCH4III ACNGT 3 cut(s) 857, 1083, 1133
HpyCH4IV ACGT 1 cut(s) 818
HpyCH4V TGCA 7 cut(s) 215, 335, 353, 793, 924, 993, 1140
HpyF10VI GCNNNNNNNGC 1 cut(s) 799
HpyF3I CTNAG 3 cut(s) 272, 401, 745
HpySE526I ACGT 1 cut(s) 818
Hsp92I GRCGYC 1 cut(s) 505
Hsp92II CATG 8 cut(s) 109, 469, 924, 1017, 1191, 1200, 1250, 1271
HspAI GCGC 2 cut(s) 505, 524
KasI GGCGCC 1 cut(s) 504
Kzo9I GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
LmnI GCTCC 1 cut(s) 1277
Lsp1109I GCAGC 2 cut(s) 508, 977
LweI GCATC 2 cut(s) 224, 344
MaeI CTAG 6 cut(s) 377, 782, 810, 1220, 1242, 1280
MaeII ACGT 1 cut(s) 818
MaeIII GTNAC 6 cut(s) 17, 25, 101, 415, 1019, 1034
MalI GATC 7 cut(s) 303, 438, 534, 567, 771, 1071, 1218
MboI GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
MboII GAAGA 4 cut(s) 111, 139, 422, 481
MflI RGATCY 3 cut(s) 565, 769, 1216
MlsI TGGCCA 1 cut(s) 495
MluCI AATT 7 cut(s) 163, 200, 752, 788, 805, 1208, 1228
MluNI TGGCCA 1 cut(s) 495
Mly113I GGCGCC 1 cut(s) 505
MmeI TCCRAC 3 cut(s) 279, 747, 804
MnlI CCTC 5 cut(s) 59, 373, 636, 750, 1317
Mox20I TGGCCA 1 cut(s) 495
Mph1103I ATGCAT 1 cut(s) 337
MscI TGGCCA 1 cut(s) 495
MseI TTAA 3 cut(s) 786, 1085, 1233
MslI CAYNNNNRTG 5 cut(s) 220, 444, 855, 919, 925
Msp20I TGGCCA 1 cut(s) 495
MspI CCGG 4 cut(s) 257, 387, 543, 1067
MspR9I CCNGG 6 cut(s) 84, 258, 462, 517, 543, 669
MvaI CCWGG 4 cut(s) 84, 462, 517, 669
MwoI GCNNNNNNNGC 1 cut(s) 799
NarI GGCGCC 1 cut(s) 505
NciI CCSGG 2 cut(s) 258, 543
NdeII GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
NlaIII CATG 8 cut(s) 109, 469, 924, 1017, 1191, 1200, 1250, 1271
NlaIV GGNNCC 4 cut(s) 506, 771, 880, 1273
NmuCI GTSAC 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 2 cut(s) 1017, 1191
PceI AGGCCT 1 cut(s) 587
PciI ACATGT 1 cut(s) 1013
PfeI GAWTC 5 cut(s) 192, 239, 251, 358, 1112
PkrI GCNGC 2 cut(s) 523, 992
PluTI GGCGCC 1 cut(s) 508
PscI ACATGT 1 cut(s) 1013
Psp6I CCWGG 4 cut(s) 82, 460, 515, 667
PspGI CCWGG 4 cut(s) 82, 460, 515, 667
PspN4I GGNNCC 4 cut(s) 506, 771, 880, 1273
PspPI GGNCC 2 cut(s) 878, 981
PstNI CAGNNNCTG 1 cut(s) 990
PsuI RGATCY 3 cut(s) 565, 769, 1216
RsaI GTAC 5 cut(s) 61, 81, 576, 632, 1080
RsaNI GTAC 5 cut(s) 60, 80, 575, 631, 1079
RseI CAYNNNNRTG 5 cut(s) 220, 444, 855, 919, 925
SaqAI TTAA 3 cut(s) 786, 1085, 1233
SatI GCNGC 2 cut(s) 522, 991
Sau3AI GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
Sau96I GGNCC 2 cut(s) 878, 981
ScrFI CCNGG 6 cut(s) 84, 258, 462, 517, 543, 669
SfaNI GCATC 2 cut(s) 224, 344
SfcI CTRYAG 1 cut(s) 774
SfoI GGCGCC 1 cut(s) 506
SinI GGWCC 2 cut(s) 878, 981
SmiMI CAYNNNNRTG 5 cut(s) 220, 444, 855, 919, 925
Sse9I AATT 7 cut(s) 163, 200, 752, 788, 805, 1208, 1228
SseBI AGGCCT 1 cut(s) 587
SsiI CCGC 3 cut(s) 842, 876, 1126
SspDI GGCGCC 1 cut(s) 504
SspI AATATT 1 cut(s) 1180
SspMI CTAG 6 cut(s) 377, 782, 810, 1220, 1242, 1280
StuI AGGCCT 1 cut(s) 587
StyD4I CCNGG 6 cut(s) 82, 256, 460, 515, 541, 667
StyI CCWWGG 2 cut(s) 181, 555
TaaI ACNGT 3 cut(s) 857, 1083, 1133
TaiI ACGT 1 cut(s) 821
TaqI TCGA 1 cut(s) 435
TasI AATT 7 cut(s) 163, 200, 752, 788, 805, 1208, 1228
TatI WGTACW 2 cut(s) 630, 1078
TfiI GAWTC 5 cut(s) 192, 239, 251, 358, 1112
Tru1I TTAA 3 cut(s) 786, 1085, 1233
Tru9I TTAA 3 cut(s) 786, 1085, 1233
TscAI CASTG 4 cut(s) 36, 103, 975, 991
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 2 cut(s) 521, 990
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 8 cut(s) 126, 174, 371, 482, 681, 839, 1115, 1256
TspGWI ACGGA 1 cut(s) 328
TspRI CASTG 4 cut(s) 36, 103, 975, 991
VpaK11BI GGWCC 2 cut(s) 878, 981
XapI RAATTY 4 cut(s) 163, 200, 805, 1228
XbaI TCTAGA 1 cut(s) 1241
XceI RCATGY 2 cut(s) 1017, 1191
XmiI GTMKAC 1 cut(s) 187
XspI CTAG 6 cut(s) 377, 782, 810, 1220, 1242, 1280
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.