Rh1AG077000

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000114
Physical Location & Seq
Reverse (-)
12890546 .. 12933886
43341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG077000.1

Sequence Viewer

Length: 2883 bp
ATGGGGTGGCTCCTGTGTTACGTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTCCCAATACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATCCCCAACTACTGCATTAGTATGGGTAGCTAATAGAAAATCTCCACTTGATTCTCCGGGTGTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCTACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTGCGTTGCCTGGCATGAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGATCCTAAAGTACCATTTCAGGCCTTTATCTGGAAGGAAACTACTCCGTATGTTAGAAGTTCTGTGTACGTTGCCCAGTATGCAAGAACACAGTTTCAAAATCCAGGTGGAACTGCGTTTTTCAATTCATACAACTTTGATGTTGATGAGGTTTATCTTGCTTGCAGTGTCTCGGATAGCTCAGTAAAATGGAGGGCCTGGTTGGATCCCACGGGGCAACTTAAACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGACGTAGGGAATCCAGGTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCGGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCGGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACTTCTTTTGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTACTAGTGCAAATGATATTCATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCTGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCGCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCTACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATTCCGGAAACCTCGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGGAAGTTCACCTTCGGCATAGATCCTAAAGTACCAGTTCAGTCCTTTGTCTGGAAAGAAACTACTCCGTATGCTAGAAGTTCTGTGTACATTGGCCAGGATACAAGAACACAGTTTCAAAATCCAGGTGGAACTGCGTTTTTCTATTCATACAACTTTGATGTTGATGAGGTTTATCTTGCTTGCAGTGTCTCGGATAGCTCAGTAAAATGGAGGGCCTGGTTGGATCCCACGGGGCAACTTAAACAGCAGTTGTGGCAGTATTCTAGTAAAACGTGGTTGGAAGTAGGGAATTCATGGCCCGTTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAACAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTTTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAAAACTGTTCTTGTACAGCTTATGCTTATGTAAACGCGACAGATGGAAGTAATATTGGGACTTGTTTGGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTATTGGTGCACATGATATTTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCTGCAGTTGGATTGCTTACAATAGCTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAAGGTAAGCAGAATATAAGTAATAGTGAGATTGATTTGCTTAATGATATGCAGTTCAAGCAGGAAGAAGTTGCAGCGATAATGAAGGATTTCAGTGAGCCAGGGTCTCTTGCCCCAACTGGATTGCACCTTGGTGGCACAAAATACATGGTTATTCAGGAGGAGAGTGGAGTCGTAATTCGTGGAAAGAAGGTCTGTTCATTTGCTTTCATCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

960

Amino Acids

106.13

Weight (kDa)

8.1

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 172 3.5e-31 D-mannose binding lectin
S_locus_glycop PF00954 231 - 314 4e-14 S-locus glycoprotein domain
PAN_2 PF08276 343 - 404 3.4e-12 PAN-like domain
B_lectin PF01453 492 - 592 6.7e-31 D-mannose binding lectin
S_locus_glycop PF00954 649 - 736 3.2e-14 S-locus glycoprotein domain
PAN_2 PF08276 765 - 826 6.9e-14 PAN-like domain
Profilin PF00235 904 - 953 8e-08 Profilin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 501, 1761
AccI GTMKAC 4 cut(s) 184, 323, 1444, 1583
AccII CGCG 1 cut(s) 2420
AccIII TCCGGA 1 cut(s) 1643
AciI CCGC 7 cut(s) 867, 959, 1117, 1306, 2133, 2225, 2572
AcoI YGGCCR 3 cut(s) 490, 1750, 1894
AcsI RAATTY 5 cut(s) 160, 802, 1420, 1457, 2092
AcyI GRCGYC 2 cut(s) 502, 1762
AdeI CACNNNGTG 2 cut(s) 420, 1680
AfaI GTAC 8 cut(s) 61, 81, 573, 629, 1132, 1833, 1889, 2398
AfeI AGCGCT 2 cut(s) 522, 1782
AfiI CCNNNNNNNGG 9 cut(s) 112, 539, 591, 958, 1305, 1799, 1851, 2224, 2571
AflIII ACRYGT 2 cut(s) 1004, 2270
AhlI ACTAGT 1 cut(s) 1229
AjuI GAANNNNNNNTTGG 4 cut(s) 1373, 1405, 2639, 2671
AleI CACNNNNGTG 1 cut(s) 2796
AloI GAACNNNNNNTCC 4 cut(s) 378, 410, 1638, 1670
Alw21I GWGCWC 2 cut(s) 36, 2503
Alw26I GTCTC 5 cut(s) 736, 1333, 1996, 2599, 2775
Alw44I GTGCAC 1 cut(s) 2499
AlwNI CAGNNNCTG 2 cut(s) 2148, 2247
Ama87I CYCGRG 1 cut(s) 1799
Aor13HI TCCGGA 1 cut(s) 1643
Aor51HI AGCGCT 2 cut(s) 522, 1782
AoxI GGCC 7 cut(s) 490, 582, 756, 1750, 1894, 2016, 2099
ApaLI GTGCAC 1 cut(s) 2499
ApeKI GCWGC 9 cut(s) 518, 981, 1334, 1337, 1778, 2247, 2600, 2603, 2738
ApoI RAATTY 5 cut(s) 160, 802, 1420, 1457, 2092
Asp700I GAANNNNTTC 2 cut(s) 1403, 2753
AspLEI GCGC 4 cut(s) 504, 523, 1764, 1783
AsuC2I CCSGG 5 cut(s) 255, 540, 1515, 1800, 1801
AsuHPI GGTGA 9 cut(s) 541, 851, 900, 905, 1060, 1801, 2166, 2171, 2326
AvaI CYCGRG 1 cut(s) 1799
AvaII GGWCC 7 cut(s) 129, 869, 972, 1308, 2135, 2238, 2574
BaeGI GKGCMC 1 cut(s) 2503
BalI TGGCCA 3 cut(s) 492, 1752, 1896
BamHI GGATCC 2 cut(s) 766, 2026
BanI GGYRCC 2 cut(s) 501, 1761
Bbv12I GWGCWC 2 cut(s) 36, 2503
BbvI GCAGC 9 cut(s) 530, 968, 1324, 1346, 1790, 2234, 2590, 2612, 2750
BccI CCATC 4 cut(s) 272, 1154, 1532, 2420
BceAI ACGGC 2 cut(s) 1030, 2296
BciVI GTATCC 2 cut(s) 373, 1894
BcnI CCSGG 5 cut(s) 255, 540, 1515, 1800, 1801
BcoDI GTCTC 5 cut(s) 736, 1333, 1996, 2599, 2775
BcuI ACTAGT 1 cut(s) 1229
BfmI CTRYAG 4 cut(s) 1332, 1338, 2598, 2604
BfoI RGCGCY 4 cut(s) 505, 524, 1765, 1784
BfuI GTATCC 2 cut(s) 373, 1894
BisI GCNGC 9 cut(s) 519, 982, 1335, 1338, 1779, 2248, 2601, 2604, 2739
BlpI GCTNAGC 2 cut(s) 269, 1529
BlsI GCNGC 9 cut(s) 520, 983, 1336, 1339, 1780, 2249, 2602, 2605, 2740
Bme18I GGWCC 7 cut(s) 129, 869, 972, 1308, 2135, 2238, 2574
BmeT110I CYCGRG 1 cut(s) 1799
BmrI ACTGGG 1 cut(s) 631
BmsI GCATC 2 cut(s) 341, 1601
BmuI ACTGGG 1 cut(s) 631
BplI GAGNNNNNCTC 4 cut(s) 1088, 1120, 2354, 2386
Bpu1102I GCTNAGC 2 cut(s) 269, 1529
BpuMI CCSGG 5 cut(s) 255, 540, 1515, 1800, 1801
BsaBI GATNNNNATC 2 cut(s) 282, 1542
BsaHI GRCGYC 2 cut(s) 502, 1762
BsaI GGTCTC 1 cut(s) 2775
BsaWI WCCGGW 3 cut(s) 383, 974, 1643
Bsc4I CCNNNNNNNGG 9 cut(s) 112, 539, 591, 958, 1305, 1799, 1851, 2224, 2571
Bse3DI GCAATG 4 cut(s) 357, 862, 1617, 2128
Bse8I GATNNNNATC 2 cut(s) 282, 1542
BseAI TCCGGA 1 cut(s) 1643
BseGI GGATG 7 cut(s) 332, 436, 509, 1592, 1696, 1769, 2874
BseJI GATNNNNATC 2 cut(s) 282, 1542
BseLI CCNNNNNNNGG 9 cut(s) 112, 539, 591, 958, 1305, 1799, 1851, 2224, 2571
BseMI GCAATG 4 cut(s) 357, 862, 1617, 2128
BseMII CTCAG 6 cut(s) 283, 389, 756, 1543, 1649, 2016
BseRI GAGGAG 1 cut(s) 2840
BseSI GKGCMC 1 cut(s) 2503
BseXI GCAGC 9 cut(s) 530, 968, 1324, 1346, 1790, 2234, 2590, 2612, 2750
Bsh1236I CGCG 1 cut(s) 2420
BshFI GGCC 7 cut(s) 492, 584, 758, 1752, 1896, 2018, 2101
BshNI GGYRCC 2 cut(s) 501, 1761
BsiHKAI GWGCWC 2 cut(s) 36, 2503
BsiHKCI CYCGRG 1 cut(s) 1799
BsiSI CCGG 9 cut(s) 254, 384, 540, 975, 1058, 1514, 1644, 1800, 2324
BslFI GGGAC 5 cut(s) 142, 855, 1189, 2121, 2455
BslI CCNNNNNNNGG 9 cut(s) 112, 539, 591, 958, 1305, 1799, 1851, 2224, 2571
BsmAI GTCTC 5 cut(s) 736, 1333, 1996, 2599, 2775
BsmFI GGGAC 5 cut(s) 142, 855, 1189, 2121, 2455
BsmI GAATGC 2 cut(s) 1115, 2381
BsnI GGCC 7 cut(s) 492, 584, 758, 1752, 1896, 2018, 2101
Bso31I GGTCTC 1 cut(s) 2775
BsoBI CYCGRG 1 cut(s) 1799
Bsp1286I GDGCHC 2 cut(s) 36, 2503
Bsp13I TCCGGA 1 cut(s) 1643
Bsp1407I TGTACA 3 cut(s) 1130, 1887, 2396
Bsp1720I GCTNAGC 2 cut(s) 269, 1529
BspACI CCGC 7 cut(s) 867, 959, 1117, 1306, 2133, 2225, 2572
BspANI GGCC 7 cut(s) 492, 584, 758, 1752, 1896, 2018, 2101
BspCNI CTCAG 6 cut(s) 282, 390, 755, 1542, 1650, 2015
BspEI TCCGGA 1 cut(s) 1643
BspFNI CGCG 1 cut(s) 2420
BspMAI CTGCAG 4 cut(s) 1336, 1342, 2602, 2608
BspT107I GGYRCC 2 cut(s) 501, 1761
BspTNI GGTCTC 1 cut(s) 2775
BsrDI GCAATG 4 cut(s) 357, 862, 1617, 2128
BsrGI TGTACA 3 cut(s) 1130, 1887, 2396
BssNAI GTATAC 2 cut(s) 185, 1445
BssNI GRCGYC 2 cut(s) 502, 1762
BssT1I CCWWGG 4 cut(s) 124, 178, 1438, 2794
Bst1107I GTATAC 2 cut(s) 185, 1445
Bst4CI ACNGT 6 cut(s) 31, 654, 1124, 1914, 2144, 2390
BstACI GRCGYC 2 cut(s) 502, 1762
BstAPI GCANNNNNTGC 1 cut(s) 1469
BstAUI TGTACA 3 cut(s) 1130, 1887, 2396
BstC8I GCNNGC 4 cut(s) 724, 1115, 1984, 2381
BstDEI CTNAG 6 cut(s) 269, 398, 742, 1529, 1658, 2002
BstDSI CCRYGG 2 cut(s) 771, 2031
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 7 cut(s) 332, 436, 509, 1592, 1696, 1769, 2874
BstFNI CGCG 1 cut(s) 2420
BstH2I RGCGCY 4 cut(s) 505, 524, 1765, 1784
BstHHI GCGC 4 cut(s) 504, 523, 1764, 1783
BstMAI GTCTC 5 cut(s) 736, 1333, 1996, 2599, 2775
BstMWI GCNNNNNNNGC 5 cut(s) 641, 796, 1469, 2056, 2722
BstNSI RCATGY 2 cut(s) 1008, 2274
BstPI GGTNACC 1 cut(s) 101
BstSFI CTRYAG 4 cut(s) 1332, 1338, 2598, 2604
BstSLI GKGCMC 1 cut(s) 2503
BstUI CGCG 1 cut(s) 2420
BstV1I GCAGC 9 cut(s) 530, 968, 1324, 1346, 1790, 2234, 2590, 2612, 2750
BstX2I RGATCY 6 cut(s) 562, 766, 1207, 1822, 2026, 2473
BstYI RGATCY 6 cut(s) 562, 766, 1207, 1822, 2026, 2473
BstZ17I GTATAC 2 cut(s) 185, 1445
BsuI GTATCC 2 cut(s) 373, 1894
BsuRI GGCC 7 cut(s) 492, 584, 758, 1752, 1896, 2018, 2101
BtgI CCRYGG 2 cut(s) 771, 2031
BtsCI GGATG 7 cut(s) 332, 436, 509, 1592, 1696, 1769, 2874
BtsI GCAGTG 4 cut(s) 280, 733, 1540, 1993
BtsIMutI CAGTG 9 cut(s) 36, 103, 280, 733, 1540, 1993, 2149, 2248, 2764
Cac8I GCNNGC 4 cut(s) 724, 1115, 1984, 2381
CaiI CAGNNNCTG 2 cut(s) 2148, 2247
CfoI GCGC 4 cut(s) 504, 523, 1764, 1783
Cfr9I CCCGGG 1 cut(s) 1799
Csp6I GTAC 8 cut(s) 60, 80, 572, 628, 1131, 1832, 1888, 2397
CviQI GTAC 8 cut(s) 60, 80, 572, 628, 1131, 1832, 1888, 2397
DdeI CTNAG 6 cut(s) 269, 398, 742, 1529, 1658, 2002
DinI GGCGCC 2 cut(s) 503, 1763
DraIII CACNNNGTG 2 cut(s) 420, 1680
EaeI YGGCCR 3 cut(s) 490, 1750, 1894
Eco130I CCWWGG 4 cut(s) 124, 178, 1438, 2794
Eco147I AGGCCT 1 cut(s) 584
Eco31I GGTCTC 1 cut(s) 2775
Eco32I GATATC 2 cut(s) 844, 2110
Eco47I GGWCC 7 cut(s) 129, 869, 972, 1308, 2135, 2238, 2574
Eco47III AGCGCT 2 cut(s) 522, 1782
Eco88I CYCGRG 1 cut(s) 1799
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 3 cut(s) 129, 756, 2016
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 2 cut(s) 802, 2092
EcoRV GATATC 2 cut(s) 844, 2110
EcoT14I CCWWGG 4 cut(s) 124, 178, 1438, 2794
EgeI GGCGCC 2 cut(s) 503, 1763
EheI GGCGCC 2 cut(s) 503, 1763
ErhI CCWWGG 4 cut(s) 124, 178, 1438, 2794
FaqI GGGAC 5 cut(s) 142, 855, 1189, 2121, 2455
FblI GTMKAC 4 cut(s) 184, 323, 1444, 1583
Fnu4HI GCNGC 9 cut(s) 519, 982, 1335, 1338, 1779, 2248, 2601, 2604, 2739
FokI GGATG 7 cut(s) 319, 423, 496, 1579, 1683, 1756, 2861
Fsp4HI GCNGC 9 cut(s) 519, 982, 1335, 1338, 1779, 2248, 2601, 2604, 2739
GlaI GCGC 4 cut(s) 503, 522, 1763, 1782
GluI GCNGC 9 cut(s) 519, 982, 1335, 1338, 1779, 2248, 2601, 2604, 2739
HaeII RGCGCY 4 cut(s) 505, 524, 1765, 1784
HaeIII GGCC 7 cut(s) 492, 584, 758, 1752, 1896, 2018, 2101
HapII CCGG 9 cut(s) 254, 384, 540, 975, 1058, 1514, 1644, 1800, 2324
HhaI GCGC 4 cut(s) 504, 523, 1764, 1783
Hin1I GRCGYC 2 cut(s) 502, 1762
Hin6I GCGC 4 cut(s) 502, 521, 1762, 1781
HinP1I GCGC 4 cut(s) 502, 521, 1762, 1781
HincII GTYRAC 2 cut(s) 1002, 2268
HindII GTYRAC 2 cut(s) 1002, 2268
HindIII AAGCTT 2 cut(s) 1037, 2303
HpaII CCGG 9 cut(s) 254, 384, 540, 975, 1058, 1514, 1644, 1800, 2324
HphI GGTGA 9 cut(s) 541, 851, 900, 905, 1060, 1801, 2166, 2171, 2326
Hpy188III TCNNGA 6 cut(s) 155, 592, 1415, 1644, 1852, 2822
HpyAV CCTTC 5 cut(s) 562, 589, 1822, 2743, 2848
HpyCH4III ACNGT 6 cut(s) 31, 654, 1124, 1914, 2144, 2390
HpyCH4IV ACGT 5 cut(s) 21, 630, 815, 825, 2075
HpyF10VI GCNNNNNNNGC 5 cut(s) 641, 796, 1469, 2056, 2722
HpyF3I CTNAG 6 cut(s) 269, 398, 742, 1529, 1658, 2002
HpySE526I ACGT 5 cut(s) 21, 630, 815, 825, 2075
Hsp92I GRCGYC 2 cut(s) 502, 1762
HspAI GCGC 4 cut(s) 502, 521, 1762, 1781
KasI GGCGCC 2 cut(s) 501, 1761
Kpn2I TCCGGA 1 cut(s) 1643
LmnI GCTCC 3 cut(s) 15, 1268, 2534
Lsp1109I GCAGC 9 cut(s) 530, 968, 1324, 1346, 1790, 2234, 2590, 2612, 2750
LweI GCATC 2 cut(s) 341, 1601
MaeII ACGT 5 cut(s) 21, 630, 815, 825, 2075
MboII GAAGA 9 cut(s) 111, 139, 419, 478, 1393, 1399, 1679, 2659, 2741
MflI RGATCY 6 cut(s) 562, 766, 1207, 1822, 2026, 2473
MhlI GDGCHC 2 cut(s) 36, 2503
MlsI TGGCCA 3 cut(s) 492, 1752, 1896
MluNI TGGCCA 3 cut(s) 492, 1752, 1896
Mly113I GGCGCC 2 cut(s) 502, 1762
MlyI GAGTC 3 cut(s) 1097, 2363, 2844
MmeI TCCRAC 8 cut(s) 276, 744, 801, 1324, 1536, 2004, 2061, 2590
Mox20I TGGCCA 3 cut(s) 492, 1752, 1896
MroI TCCGGA 1 cut(s) 1643
MroXI GAANNNNTTC 2 cut(s) 1403, 2753
MscI TGGCCA 3 cut(s) 492, 1752, 1896
MseI TTAA 6 cut(s) 783, 1293, 1725, 2043, 2559, 2706
MslI CAYNNNNRTG 9 cut(s) 96, 217, 910, 916, 1251, 1477, 2176, 2182, 2796
Msp20I TGGCCA 3 cut(s) 492, 1752, 1896
MspA1I CMGCKG 3 cut(s) 1117, 1337, 2603
MspI CCGG 9 cut(s) 254, 384, 540, 975, 1058, 1514, 1644, 1800, 2324
Mva1269I GAATGC 2 cut(s) 1115, 2381
MvnI CGCG 1 cut(s) 2420
MwoI GCNNNNNNNGC 5 cut(s) 641, 796, 1469, 2056, 2722
NarI GGCGCC 2 cut(s) 502, 1762
NciI CCSGG 5 cut(s) 255, 540, 1515, 1800, 1801
NmuCI GTSAC 4 cut(s) 412, 1100, 1672, 2366
NspI RCATGY 2 cut(s) 1008, 2274
OliI CACNNNNGTG 1 cut(s) 2796
PceI AGGCCT 1 cut(s) 584
PciI ACATGT 2 cut(s) 1004, 2270
PctI GAATGC 2 cut(s) 1115, 2381
PdmI GAANNNNTTC 2 cut(s) 1403, 2753
PfeI GAWTC 9 cut(s) 189, 248, 355, 832, 1449, 1496, 1508, 1615, 1640
PkrI GCNGC 9 cut(s) 520, 983, 1336, 1339, 1780, 2249, 2602, 2605, 2740
PleI GAGTC 3 cut(s) 1097, 2363, 2843
PluTI GGCGCC 2 cut(s) 505, 1765
PpsI GAGTC 3 cut(s) 1097, 2363, 2843
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 2 cut(s) 1004, 2270
Psp5II RGGWCCY 1 cut(s) 129
PspEI GGTNACC 1 cut(s) 101
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 4 cut(s) 1336, 1342, 2602, 2608
PstNI CAGNNNCTG 2 cut(s) 2148, 2247
PsuI RGATCY 6 cut(s) 562, 766, 1207, 1822, 2026, 2473
PvuII CAGCTG 2 cut(s) 1337, 2603
RsaI GTAC 8 cut(s) 61, 81, 573, 629, 1132, 1833, 1889, 2398
RsaNI GTAC 8 cut(s) 60, 80, 572, 628, 1131, 1832, 1888, 2397
RseI CAYNNNNRTG 9 cut(s) 96, 217, 910, 916, 1251, 1477, 2176, 2182, 2796
SaqAI TTAA 6 cut(s) 783, 1293, 1725, 2043, 2559, 2706
SatI GCNGC 9 cut(s) 519, 982, 1335, 1338, 1779, 2248, 2601, 2604, 2739
SchI GAGTC 3 cut(s) 1097, 2363, 2844
SduI GDGCHC 2 cut(s) 36, 2503
SfaNI GCATC 2 cut(s) 341, 1601
SfcI CTRYAG 4 cut(s) 1332, 1338, 2598, 2604
SfoI GGCGCC 2 cut(s) 503, 1763
SinI GGWCC 7 cut(s) 129, 869, 972, 1308, 2135, 2238, 2574
SmaI CCCGGG 1 cut(s) 1801
SmiMI CAYNNNNRTG 9 cut(s) 96, 217, 910, 916, 1251, 1477, 2176, 2182, 2796
SpeI ACTAGT 1 cut(s) 1229
SseBI AGGCCT 1 cut(s) 584
SsiI CCGC 7 cut(s) 867, 959, 1117, 1306, 2133, 2225, 2572
SspDI GGCGCC 2 cut(s) 501, 1761
SspI AATATT 2 cut(s) 1171, 2437
StuI AGGCCT 1 cut(s) 584
StyI CCWWGG 4 cut(s) 124, 178, 1438, 2794
TaaI ACNGT 6 cut(s) 31, 654, 1124, 1914, 2144, 2390
TaiI ACGT 5 cut(s) 24, 633, 818, 828, 2078
TaqI TCGA 2 cut(s) 432, 1692
TatI WGTACW 3 cut(s) 1130, 1887, 2396
TfiI GAWTC 9 cut(s) 189, 248, 355, 832, 1449, 1496, 1508, 1615, 1640
Tru1I TTAA 6 cut(s) 783, 1293, 1725, 2043, 2559, 2706
Tru9I TTAA 6 cut(s) 783, 1293, 1725, 2043, 2559, 2706
TscAI CASTG 9 cut(s) 36, 103, 280, 733, 1540, 1993, 2149, 2248, 2764
TseFI GTSAC 4 cut(s) 412, 1100, 1672, 2366
TseI GCWGC 9 cut(s) 518, 981, 1334, 1337, 1778, 2247, 2600, 2603, 2738
Tsp45I GTSAC 4 cut(s) 412, 1100, 1672, 2366
TspGWI ACGGA 6 cut(s) 325, 597, 1279, 1585, 1857, 2545
TspMI CCCGGG 1 cut(s) 1799
TspRI CASTG 9 cut(s) 36, 103, 280, 733, 1540, 1993, 2149, 2248, 2764
VneI GTGCAC 1 cut(s) 2499
VpaK11BI GGWCC 7 cut(s) 129, 869, 972, 1308, 2135, 2238, 2574
XapI RAATTY 5 cut(s) 160, 802, 1420, 1457, 2092
XceI RCATGY 2 cut(s) 1008, 2274
XmaI CCCGGG 1 cut(s) 1799
XmiI GTMKAC 4 cut(s) 184, 323, 1444, 1583
XmnI GAANNNNTTC 2 cut(s) 1403, 2753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.