Rh1AG076700

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000114
Physical Location & Seq
Reverse (-)
12757692 .. 12760815
3124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG076700.1

Sequence Viewer

Length: 2433 bp
ATGGGGTGGCCCCGGTGTTACGTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTCCCAATACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCCCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCCGGTTTCTTTATGCTCAGCAATGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTGTGTTGCCTGGCATGAAGATTAGCTTGAACAAAATGACTGGCCAACAAAGGCGCCTTACATCCTGGGCAGCACTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGATCCTAAAGTACCAGTTCAGGCCTTTATCTGGAAGGAAACTACTCCGTATGTTAGAAGTTCTGTGTACATTGGCCAGGATACAAGAACACGGTTTCAAAATCCAGGTGGAACTGCGTTTTTCCTTTCATACAACTTTGATGTTGATGAGGTTTATCTTGCTTGCAGTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCCACGGGGCAACTTAAACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGAACTAGGGAATTTATGGCCCGTTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCGGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCGGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACTTGTTTTGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTACTGGTTTGGCAAATGATATTCATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCTGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAAGGTAAGCAGAATATAAGTAATGTTAGTGCAGGAGGTGGGAAGAATGATACAGAATTACCACTCTTCAGTTTAAGGAGTATCTTCTCTGAAGCGAATAAGCTTGGAGAGGGGGGGTTCGGCCCTGTTTATAAGGGAATTTTGCCAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCAAGAATGAGCTGAAACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGTTGTATGGAAGGAGATGAAATGATATTGATCTATGAATACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATGCCTTTGAAAAGACAAAGTTAGATTGGGATACACGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTACTATATATCCACAAGTACTCTAGATTGAAAATCATCCACAGAGATCTAAAAGCAAGCAATGTTCTGTTGGACGGAACAATGAACCCCAAAGTGTCTGACTTTGGAATGGCGAGAATTTTTGACATAAATCAAATTGAAGCAAATACTAACAAGGTTGTTGGAACATACGGCTATATGTCTCCTGAATATGCACTCTTTGGTCATTTCTCCGAGAAATTGGATGTATTTAGCTTCGGAGTATTGTTGTTAGAGATTGTAAGCGGAAAGAAGAATGCTTCTTTTTATAGCTTTGAAAATTCACTAACGCTTGCTCAATGGGTATGGGAATTATGGAAAGAAGGTAGAGGAGTGGAGGTAATTGACGCATCAGTAAGGGAAACATGCCGGATTCATGAAGCTTTGAGGTGTATCCATATCGGGCTTTTGTGCGTTCAAGAAGCTCCAGTTGATCGACCAACAATGTCATCCGTGATTCATATGCTCGAGGTTGACGAAGCTACATCACTTCCACCCTCCAAAGAACCAGCTTATTCAACATGTAGAAATTCAAGTCCTGTTACCATTTTTTCTGACAATGTAATCACCATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

810

Amino Acids

90.35

Weight (kDa)

7.94

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 172 1.2e-31 D-mannose binding lectin
S_locus_glycop PF00954 233 - 316 3.4e-15 S-locus glycoprotein domain
PAN_2 PF08276 345 - 406 2.6e-14 PAN-like domain
Pkinase PF00069 499 - 701 6.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 501 - 768 6.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1539
AccB1I GGYRCC 1 cut(s) 501
AccI GTMKAC 1 cut(s) 184
AciI CCGC 5 cut(s) 873, 965, 1123, 1315, 2085
AclWI GGATC 7 cut(s) 306, 524, 557, 761, 774, 1074, 1221
AcoI YGGCCR 3 cut(s) 490, 634, 1569
AcsI RAATTY 9 cut(s) 160, 197, 802, 832, 1545, 1742, 1938, 2119, 2368
AcuI CTGAAG 2 cut(s) 1459, 1518
AcyI GRCGYC 1 cut(s) 502
AdeI CACNNNGTG 1 cut(s) 420
AfaI GTAC 7 cut(s) 61, 81, 573, 629, 1138, 1824, 1841
AfiI CCNNNNNNNGG 6 cut(s) 112, 539, 591, 964, 1314, 1578
AflIII ACRYGT 3 cut(s) 1010, 1719, 2360
AjnI CCWGG 5 cut(s) 82, 457, 512, 636, 664
AjuI GAANNNNNNNTTGG 2 cut(s) 1382, 1414
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 3 cut(s) 736, 1342, 2007
AlwI GGATC 7 cut(s) 306, 524, 557, 761, 774, 1074, 1221
Ama87I CYCGRG 1 cut(s) 2306
AoxI GGCC 7 cut(s) 8, 490, 582, 634, 839, 1528, 1569
ApeKI GCWGC 4 cut(s) 518, 987, 1343, 1346
ApoI RAATTY 9 cut(s) 160, 197, 802, 832, 1545, 1742, 1938, 2119, 2368
AspLEI GCGC 1 cut(s) 504
AspS9I GGNCC 7 cut(s) 9, 129, 840, 875, 978, 1317, 1529
AsuC2I CCSGG 3 cut(s) 13, 255, 540
AsuHPI GGTGA 5 cut(s) 541, 906, 911, 1066, 2398
AsuII TTCGAA 1 cut(s) 1795
AvaI CYCGRG 1 cut(s) 2306
AvaII GGWCC 4 cut(s) 129, 875, 978, 1317
BalI TGGCCA 3 cut(s) 492, 636, 1571
BamHI GGATCC 1 cut(s) 766
BanI GGYRCC 1 cut(s) 501
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 4 cut(s) 530, 974, 1333, 1355
BccI CCATC 2 cut(s) 272, 1160
BceAI ACGGC 2 cut(s) 1036, 2008
BciT130I CCWGG 5 cut(s) 84, 459, 514, 638, 666
BciVI GTATCC 4 cut(s) 373, 634, 1777, 2243
BcnI CCSGG 3 cut(s) 13, 255, 540
BcoDI GTCTC 3 cut(s) 736, 1342, 2007
BfaI CTAG 7 cut(s) 306, 374, 807, 827, 1217, 1280, 1845
BfmI CTRYAG 2 cut(s) 1341, 1347
BfoI RGCGCY 1 cut(s) 505
BfuI GTATCC 4 cut(s) 373, 634, 1777, 2243
BglII AGATCT 1 cut(s) 1867
BisI GCNGC 4 cut(s) 519, 988, 1344, 1347
BlpI GCTNAGC 1 cut(s) 269
BlsI GCNGC 4 cut(s) 520, 989, 1345, 1348
BmcAI AGTACT 2 cut(s) 1824, 1841
Bme1390I CCNGG 8 cut(s) 13, 84, 255, 459, 514, 540, 638, 666
Bme18I GGWCC 4 cut(s) 129, 875, 978, 1317
BmeT110I CYCGRG 1 cut(s) 2306
BmgT120I GGNCC 7 cut(s) 9, 129, 840, 875, 978, 1317, 1529
BmiI GGNNCC 7 cut(s) 11, 130, 503, 768, 877, 1273, 1319
BmrFI CCNGG 8 cut(s) 13, 84, 255, 459, 514, 540, 638, 666
BmsI GCATC 3 cut(s) 341, 1744, 2198
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
BpmI CTGGAG 2 cut(s) 1631, 2250
Bpu1102I GCTNAGC 1 cut(s) 269
Bpu14I TTCGAA 1 cut(s) 1795
BpuEI CTTGAG 1 cut(s) 1800
BpuMI CCSGG 3 cut(s) 13, 255, 540
BsaBI GATNNNNATC 2 cut(s) 282, 1706
BsaHI GRCGYC 1 cut(s) 502
BsaJI CCNNGG 5 cut(s) 11, 124, 178, 513, 771
BsaWI WCCGGW 2 cut(s) 383, 980
BsaXI ACNNNNNCTCC 2 cut(s) 2163, 2193
Bsc4I CCNNNNNNNGG 6 cut(s) 112, 539, 591, 964, 1314, 1578
Bse1I ACTGG 7 cut(s) 370, 493, 575, 937, 1215, 1240, 2267
Bse3DI GCAATG 4 cut(s) 280, 357, 868, 1888
Bse8I GATNNNNATC 2 cut(s) 282, 1706
BseBI CCWGG 5 cut(s) 84, 459, 514, 638, 666
BseDI CCNNGG 5 cut(s) 11, 124, 178, 513, 771
BseGI GGATG 6 cut(s) 332, 436, 509, 1857, 2050, 2288
BseJI GATNNNNATC 2 cut(s) 282, 1706
BseLI CCNNNNNNNGG 6 cut(s) 112, 539, 591, 964, 1314, 1578
BseMI GCAATG 4 cut(s) 280, 357, 868, 1888
BseMII CTCAG 3 cut(s) 283, 389, 756
BseNI ACTGG 7 cut(s) 370, 493, 575, 937, 1215, 1240, 2267
BseRI GAGGAG 1 cut(s) 2184
BseXI GCAGC 4 cut(s) 530, 974, 1333, 1355
BsgI GTGCAG 1 cut(s) 1458
BshFI GGCC 7 cut(s) 10, 492, 584, 636, 841, 1530, 1571
BshNI GGYRCC 1 cut(s) 501
BsiHKAI GWGCWC 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 2306
BsiSI CCGG 7 cut(s) 13, 255, 384, 540, 981, 1064, 2209
BslFI GGGAC 3 cut(s) 142, 861, 1195
BslI CCNNNNNNNGG 6 cut(s) 112, 539, 591, 964, 1314, 1578
BsmAI GTCTC 3 cut(s) 736, 1342, 2007
BsmFI GGGAC 3 cut(s) 142, 861, 1195
BsmI GAATGC 2 cut(s) 1121, 2101
BsnI GGCC 7 cut(s) 10, 492, 584, 636, 841, 1530, 1571
BsoBI CYCGRG 1 cut(s) 2306
Bsp119I TTCGAA 1 cut(s) 1795
Bsp1286I GDGCHC 1 cut(s) 36
Bsp1407I TGTACA 2 cut(s) 627, 1136
Bsp1720I GCTNAGC 1 cut(s) 269
BspACI CCGC 5 cut(s) 873, 965, 1123, 1315, 2085
BspANI GGCC 7 cut(s) 10, 492, 584, 636, 841, 1530, 1571
BspCNI CTCAG 3 cut(s) 282, 390, 755
BspHI TCATGA 2 cut(s) 1609, 2215
BspLI GGNNCC 7 cut(s) 11, 130, 503, 768, 877, 1273, 1319
BspMAI CTGCAG 2 cut(s) 1345, 1351
BspPI GGATC 7 cut(s) 306, 524, 557, 761, 774, 1074, 1221
BspT104I TTCGAA 1 cut(s) 1795
BspT107I GGYRCC 1 cut(s) 501
BsrDI GCAATG 4 cut(s) 280, 357, 868, 1888
BsrGI TGTACA 2 cut(s) 627, 1136
BsrI ACTGG 7 cut(s) 370, 493, 575, 937, 1215, 1240, 2267
BssECI CCNNGG 5 cut(s) 11, 124, 178, 513, 771
BssNAI GTATAC 1 cut(s) 185
BssNI GRCGYC 1 cut(s) 502
BssT1I CCWWGG 2 cut(s) 124, 178
Bst1107I GTATAC 1 cut(s) 185
Bst2UI CCWGG 5 cut(s) 84, 459, 514, 638, 666
Bst4CI ACNGT 4 cut(s) 31, 451, 654, 1130
Bst6I CTCTTC 1 cut(s) 1478
BstACI GRCGYC 1 cut(s) 502
BstAUI TGTACA 2 cut(s) 627, 1136
BstBI TTCGAA 1 cut(s) 1795
BstC8I GCNNGC 4 cut(s) 724, 1121, 1879, 2133
BstDEI CTNAG 3 cut(s) 269, 398, 742
BstDSI CCRYGG 1 cut(s) 771
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 6 cut(s) 332, 436, 509, 1857, 2050, 2288
BstH2I RGCGCY 1 cut(s) 505
BstHHI GCGC 1 cut(s) 504
BstMAI GTCTC 3 cut(s) 736, 1342, 2007
BstMWI GCNNNNNNNGC 1 cut(s) 796
BstNI CCWGG 5 cut(s) 84, 459, 514, 638, 666
BstNSI RCATGY 4 cut(s) 1014, 1723, 2208, 2364
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 8 cut(s) 11, 82, 253, 457, 512, 538, 636, 664
BstSFI CTRYAG 2 cut(s) 1341, 1347
BstV1I GCAGC 4 cut(s) 530, 974, 1333, 1355
BstX2I RGATCY 4 cut(s) 562, 766, 1213, 1867
BstYI RGATCY 4 cut(s) 562, 766, 1213, 1867
BstZ17I GTATAC 1 cut(s) 185
BsuI GTATCC 4 cut(s) 373, 634, 1777, 2243
BsuRI GGCC 7 cut(s) 10, 492, 584, 636, 841, 1530, 1571
BtgI CCRYGG 1 cut(s) 771
BtsCI GGATG 6 cut(s) 332, 436, 509, 1857, 2050, 2288
BtsI GCAGTG 1 cut(s) 733
BtsIMutI CAGTG 3 cut(s) 36, 103, 733
Cac8I GCNNGC 4 cut(s) 724, 1121, 1879, 2133
CciI TCATGA 2 cut(s) 1609, 2215
CfoI GCGC 1 cut(s) 504
Cfr13I GGNCC 7 cut(s) 9, 129, 840, 875, 978, 1317, 1529
CseI GACGC 1 cut(s) 2195
Csp6I GTAC 7 cut(s) 60, 80, 572, 628, 1137, 1823, 1840
CviQI GTAC 7 cut(s) 60, 80, 572, 628, 1137, 1823, 1840
DdeI CTNAG 3 cut(s) 269, 398, 742
DinI GGCGCC 1 cut(s) 503
DraIII CACNNNGTG 1 cut(s) 420
EaeI YGGCCR 3 cut(s) 490, 634, 1569
Eam1104I CTCTTC 1 cut(s) 1478
EarI CTCTTC 1 cut(s) 1478
Eco130I CCWWGG 2 cut(s) 124, 178
Eco147I AGGCCT 1 cut(s) 584
Eco32I GATATC 1 cut(s) 850
Eco47I GGWCC 4 cut(s) 129, 875, 978, 1317
Eco57I CTGAAG 2 cut(s) 1459, 1518
Eco88I CYCGRG 1 cut(s) 2306
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 802
EcoRII CCWGG 5 cut(s) 82, 457, 512, 636, 664
EcoRV GATATC 1 cut(s) 850
EcoT14I CCWWGG 2 cut(s) 124, 178
EgeI GGCGCC 1 cut(s) 503
EheI GGCGCC 1 cut(s) 503
ErhI CCWWGG 2 cut(s) 124, 178
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 536, 568
FaqI GGGAC 3 cut(s) 142, 861, 1195
FauNDI CATATG 1 cut(s) 2301
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 4 cut(s) 519, 988, 1344, 1347
FokI GGATG 6 cut(s) 319, 423, 496, 1844, 2057, 2275
Fsp4HI GCNGC 4 cut(s) 519, 988, 1344, 1347
FspBI CTAG 7 cut(s) 306, 374, 807, 827, 1217, 1280, 1845
GlaI GCGC 1 cut(s) 503
GluI GCNGC 4 cut(s) 519, 988, 1344, 1347
GsuI CTGGAG 2 cut(s) 1631, 2250
HaeII RGCGCY 1 cut(s) 505
HaeIII GGCC 7 cut(s) 10, 492, 584, 636, 841, 1530, 1571
HapII CCGG 7 cut(s) 13, 255, 384, 540, 981, 1064, 2209
HgaI GACGC 1 cut(s) 2195
HhaI GCGC 1 cut(s) 504
Hin1I GRCGYC 1 cut(s) 502
Hin6I GCGC 1 cut(s) 502
HinP1I GCGC 1 cut(s) 502
HincII GTYRAC 3 cut(s) 324, 1008, 2314
HindII GTYRAC 3 cut(s) 324, 1008, 2314
HindIII AAGCTT 3 cut(s) 1043, 1508, 2220
HinfI GANTC 7 cut(s) 189, 236, 248, 355, 1109, 2212, 2296
HpaII CCGG 7 cut(s) 13, 255, 384, 540, 981, 1064, 2209
HphI GGTGA 5 cut(s) 541, 906, 911, 1066, 2398
Hpy166II GTNNAC 7 cut(s) 185, 324, 549, 628, 902, 1008, 2314
Hpy188III TCNNGA 9 cut(s) 155, 592, 1562, 1610, 1618, 1845, 2006, 2216, 2258
Hpy8I GTNNAC 7 cut(s) 185, 324, 549, 628, 902, 1008, 2314
HpyAV CCTTC 4 cut(s) 562, 589, 1682, 2156
HpyCH4III ACNGT 4 cut(s) 31, 451, 654, 1130
HpyCH4IV ACGT 2 cut(s) 21, 815
HpyF10VI GCNNNNNNNGC 1 cut(s) 796
HpyF3I CTNAG 3 cut(s) 269, 398, 742
HpySE526I ACGT 2 cut(s) 21, 815
Hsp92I GRCGYC 1 cut(s) 502
HspAI GCGC 1 cut(s) 502
KasI GGCGCC 1 cut(s) 501
LmnI GCTCC 2 cut(s) 1277, 2269
Lsp1109I GCAGC 4 cut(s) 530, 974, 1333, 1355
LweI GCATC 3 cut(s) 341, 1744, 2198
MaeI CTAG 7 cut(s) 306, 374, 807, 827, 1217, 1280, 1845
MaeII ACGT 2 cut(s) 21, 815
MaeIII GTNAC 8 cut(s) 17, 25, 101, 412, 1016, 1031, 1106, 2380
MboII GAAGA 9 cut(s) 111, 139, 419, 478, 1402, 1462, 1465, 1483, 2104
MflI RGATCY 4 cut(s) 562, 766, 1213, 1867
MhlI GDGCHC 1 cut(s) 36
MlsI TGGCCA 3 cut(s) 492, 636, 1571
MluNI TGGCCA 3 cut(s) 492, 636, 1571
Mly113I GGCGCC 1 cut(s) 502
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 6 cut(s) 276, 744, 801, 1333, 1872, 1963
Mox20I TGGCCA 3 cut(s) 492, 636, 1571
MscI TGGCCA 3 cut(s) 492, 636, 1571
MseI TTAA 3 cut(s) 783, 1302, 1481
MslI CAYNNNNRTG 5 cut(s) 96, 217, 916, 922, 1260
Msp20I TGGCCA 3 cut(s) 492, 636, 1571
MspA1I CMGCKG 2 cut(s) 1123, 1346
MspI CCGG 7 cut(s) 13, 255, 384, 540, 981, 1064, 2209
MspR9I CCNGG 8 cut(s) 13, 84, 255, 459, 514, 540, 638, 666
Mva1269I GAATGC 2 cut(s) 1121, 2101
MvaI CCWGG 5 cut(s) 84, 459, 514, 638, 666
MwoI GCNNNNNNNGC 1 cut(s) 796
NarI GGCGCC 1 cut(s) 502
NciI CCSGG 3 cut(s) 13, 255, 540
NdeI CATATG 1 cut(s) 2301
NlaIV GGNNCC 7 cut(s) 11, 130, 503, 768, 877, 1273, 1319
NmuCI GTSAC 2 cut(s) 412, 1106
NspI RCATGY 4 cut(s) 1014, 1723, 2208, 2364
NspV TTCGAA 1 cut(s) 1795
PaeR7I CTCGAG 1 cut(s) 2306
PagI TCATGA 2 cut(s) 1609, 2215
PceI AGGCCT 1 cut(s) 584
PciI ACATGT 3 cut(s) 1010, 1719, 2360
PcsI WCGNNNNNNNCGW 1 cut(s) 2313
PctI GAATGC 2 cut(s) 1121, 2101
PfeI GAWTC 6 cut(s) 189, 236, 248, 355, 2212, 2296
PkrI GCNGC 4 cut(s) 520, 989, 1345, 1348
PleI GAGTC 1 cut(s) 1103
PluTI GGCGCC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 1103
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 3 cut(s) 1010, 1719, 2360
PsiI TTATAA 1 cut(s) 1539
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 5 cut(s) 82, 457, 512, 636, 664
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 5 cut(s) 82, 457, 512, 636, 664
PspN4I GGNNCC 7 cut(s) 11, 130, 503, 768, 877, 1273, 1319
PspPI GGNCC 7 cut(s) 9, 129, 840, 875, 978, 1317, 1529
PspPPI RGGWCCY 1 cut(s) 129
PspXI VCTCGAGB 1 cut(s) 2306
PstI CTGCAG 2 cut(s) 1345, 1351
PsuI RGATCY 4 cut(s) 562, 766, 1213, 1867
PvuII CAGCTG 1 cut(s) 1346
RsaI GTAC 7 cut(s) 61, 81, 573, 629, 1138, 1824, 1841
RsaNI GTAC 7 cut(s) 60, 80, 572, 628, 1137, 1823, 1840
RseI CAYNNNNRTG 5 cut(s) 96, 217, 916, 922, 1260
SaqAI TTAA 3 cut(s) 783, 1302, 1481
SatI GCNGC 4 cut(s) 519, 988, 1344, 1347
Sau96I GGNCC 7 cut(s) 9, 129, 840, 875, 978, 1317, 1529
ScaI AGTACT 2 cut(s) 1824, 1841
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 8 cut(s) 13, 84, 255, 459, 514, 540, 638, 666
SduI GDGCHC 1 cut(s) 36
SfaNI GCATC 3 cut(s) 341, 1744, 2198
SfcI CTRYAG 2 cut(s) 1341, 1347
SfoI GGCGCC 1 cut(s) 503
Sfr274I CTCGAG 1 cut(s) 2306
SfuI TTCGAA 1 cut(s) 1795
SinI GGWCC 4 cut(s) 129, 875, 978, 1317
SlaI CTCGAG 1 cut(s) 2306
SmiMI CAYNNNNRTG 5 cut(s) 96, 217, 916, 922, 1260
SmlI CTYRAG 2 cut(s) 1815, 2306
SmoI CTYRAG 2 cut(s) 1815, 2306
SseBI AGGCCT 1 cut(s) 584
SsiI CCGC 5 cut(s) 873, 965, 1123, 1315, 2085
SspDI GGCGCC 1 cut(s) 501
SspI AATATT 1 cut(s) 1177
SspMI CTAG 7 cut(s) 306, 374, 807, 827, 1217, 1280, 1845
StuI AGGCCT 1 cut(s) 584
StyD4I CCNGG 8 cut(s) 11, 82, 253, 457, 512, 538, 636, 664
StyI CCWWGG 2 cut(s) 124, 178
TaaI ACNGT 4 cut(s) 31, 451, 654, 1130
TaiI ACGT 2 cut(s) 24, 818
TaqI TCGA 6 cut(s) 432, 1729, 1795, 2275, 2307, 2428
TatI WGTACW 4 cut(s) 627, 1136, 1822, 1839
TfiI GAWTC 6 cut(s) 189, 236, 248, 355, 2212, 2296
Tru1I TTAA 3 cut(s) 783, 1302, 1481
Tru9I TTAA 3 cut(s) 783, 1302, 1481
TscAI CASTG 3 cut(s) 36, 103, 733
TseFI GTSAC 2 cut(s) 412, 1106
TseI GCWGC 4 cut(s) 518, 987, 1343, 1346
Tsp45I GTSAC 2 cut(s) 412, 1106
TspGWI ACGGA 5 cut(s) 325, 597, 1288, 1911, 2281
TspRI CASTG 3 cut(s) 36, 103, 733
VpaK11BI GGWCC 4 cut(s) 129, 875, 978, 1317
XapI RAATTY 9 cut(s) 160, 197, 802, 832, 1545, 1742, 1938, 2119, 2368
XbaI TCTAGA 1 cut(s) 1844
XceI RCATGY 4 cut(s) 1014, 1723, 2208, 2364
XhoI CTCGAG 1 cut(s) 2306
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 7 cut(s) 306, 374, 807, 827, 1217, 1280, 1845
ZrmI AGTACT 2 cut(s) 1824, 1841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.