Rorug01G0061100

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000114
Physical Location & Seq
Forward (+)
10057853 .. 10060541
2689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0061100.1

Sequence Viewer

Length: 1326 bp
ATGGCAGCTCTCTCCTACCTCTTCTCACTCTCCTTCCTCTGCTTCTCCTTAGCTGCCCAAGCCCTCAACAACCCAGACCCCAAATGCAGCGCCACCAACGACCACGGCTCTAACCTCCAAGTCTTCCATTTCTACAGTCCATGCTCCCCCTTCGGACCCGCAAAGTACGCACGTCCTCCTCCCTGGGAGGAGTACGTGCTCCAAACGCTGGCCAATGACCAGTCCAGGCTCCAGTTCTTGGCCAGCCTCGCCGGGGTTAAGAAATCTATCGTCCCCATTGCGTCCGGACGACAGATCATTCAGAGCCCCACGTACATTGTGAGGGCCAAGATTGGGACTCCACCTCAAACTTTGCTCATGGCTGTGGACACCAGCAGTGATGCTGCTTGGGTTCCTTGCAATGGCTGCGTTGGCTGCTCTTCCAATGTCTTTAACTCTCTCAAATCCACCACCTTCAAGTCCATTGGTTGTGGAGCACCTCAGTGCAAGCAGGCACCCAACCCCAGCTGTCTTGGAAGCACCTGCAGCTTTAATGTTACCTATGGAGGTTCCACCATTGCATCAAACCTGTCACAAGAAACCTTCACCCTAGCCAACGATGCCGTACCTGCCTACACCTTTGGTTGCATCCAGAAGACCACCGGCAGCTCAGTGCCACCGCAGGGTCTGCTGGGTCTTGGCCGAGGGCCGTTGTCGCTTCTGTCCCAGACTCAAAACCTCTACCAATCCACATTCTCATACTGCCTCCCTGGCTACAAGTCACTGAACTACTCTGGGTCACTGAGGCTTGGAACTGTTGGGCAGCCCATTAGGATCAAGTACACCCCATTGCTCAAGAACCCTAGGAGGTCATCACTCTATTATGTCAACTTAAATGCAATTAGGGTTGGAAGGAGAATTGTCGATATCCCCCCAGCAGCTTTGGCTTTCAATCCCACCACTGGCGCAGGGACAGTCATTGATTCTGGCACTGTTTTCACTCGTCTAGTGACACCCGCCTACGAGGCAGTCCGCAACGAGTTCCGAAGGAGAGTTGGCCGCAAGCTACCGGTGACGTCCCTTGGCGGGTTCGACACATGCTACACTGCCCCAATCGTCGTGCCCACGATCACTTTCATGTTCTCGGGCATGAACATGACGCTGCCCATCGAGAACGTAGTGATCCGGAGCACGGCAGGTAGCACCACATGTTTGGCCATGGCAGCGGCGCCAGACAATGTGAACTCGGTTCTTAATGTGATTGCCAACATGCAGCAGCAGAATCATAGGGTGCTGATTGATGTGCCCAACTCAAGGCTTGGTGTTGCCCGTGAGACCTGCACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

441

Amino Acids

47.22

Weight (kDa)

9.37

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 105 - 264 9.8e-37 Xylanase inhibitor N-terminal
Asp PF00026 105 - 436 4.5e-16 Eukaryotic aspartyl protease
TAXi_C PF14541 287 - 434 8.7e-28 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 530
AatII GACGTC 1 cut(s) 1058
Acc36I ACCTGC 3 cut(s) 530, 616, 1166
AccB1I GGYRCC 2 cut(s) 493, 1207
AccB7I CCANNNNNTGG 2 cut(s) 208, 238
AccIII TCCGGA 2 cut(s) 284, 1164
AciI CCGC 7 cut(s) 159, 659, 996, 1012, 1039, 1065, 1205
AclWI GGATC 2 cut(s) 821, 1156
AcoI YGGCCR 5 cut(s) 210, 240, 679, 1036, 1194
AcyI GRCGYC 2 cut(s) 1055, 1208
AfaI GTAC 5 cut(s) 167, 194, 314, 606, 821
AflIII ACRYGT 1 cut(s) 1187
AgeI ACCGGT 1 cut(s) 1048
AgsI TTSAA 2 cut(s) 457, 931
AjiI CACGTC 1 cut(s) 173
AjnI CCWGG 3 cut(s) 182, 224, 748
AleI CACNNNNGTG 1 cut(s) 481
AluBI AGCT 7 cut(s) 8, 53, 507, 528, 648, 920, 1045
AluI AGCT 7 cut(s) 8, 53, 507, 528, 648, 920, 1045
Alw21I GWGCWC 3 cut(s) 201, 478, 1172
Alw26I GTCTC 1 cut(s) 1307
AlwI GGATC 2 cut(s) 821, 1156
AlwNI CAGNNNCTG 1 cut(s) 667
Ama87I CYCGRG 1 cut(s) 1123
Aor13HI TCCGGA 2 cut(s) 284, 1164
AoxI GGCC 7 cut(s) 210, 240, 324, 679, 686, 1036, 1194
AsiGI ACCGGT 1 cut(s) 1048
AspA2I CCTAGG 1 cut(s) 842
AspLEI GCGC 3 cut(s) 92, 947, 1210
AspS9I GGNCC 3 cut(s) 155, 324, 686
AsuC2I CCSGG 1 cut(s) 253
AsuHPI GGTGA 2 cut(s) 577, 1063
AvaI CYCGRG 1 cut(s) 1123
AvaII GGWCC 1 cut(s) 155
AvrII CCTAGG 1 cut(s) 842
BaeGI GKGCMC 2 cut(s) 1104, 1287
BalI TGGCCA 3 cut(s) 212, 242, 1196
BanI GGYRCC 2 cut(s) 493, 1207
BanII GRGCYC 1 cut(s) 308
BbsI GAAGAC 2 cut(s) 115, 641
Bbv12I GWGCWC 3 cut(s) 201, 478, 1172
BccI CCATC 1 cut(s) 1154
BceAI ACGGC 4 cut(s) 121, 587, 673, 1188
BciT130I CCWGG 3 cut(s) 184, 226, 750
BcnI CCSGG 1 cut(s) 253
BcoDI GTCTC 1 cut(s) 1307
BfaI CTAG 3 cut(s) 590, 843, 986
BfmI CTRYAG 2 cut(s) 133, 523
BfoI RGCGCY 2 cut(s) 93, 1211
BfuAI ACCTGC 3 cut(s) 530, 616, 1166
BglI GCCNNNNNGGC 2 cut(s) 750, 1004
BlnI CCTAGG 1 cut(s) 842
Bme1390I CCNGG 4 cut(s) 184, 226, 253, 750
Bme18I GGWCC 1 cut(s) 155
BmeT110I CYCGRG 1 cut(s) 1123
BmgBI CACGTC 1 cut(s) 173
BmgT120I GGNCC 3 cut(s) 155, 324, 686
BmiI GGNNCC 6 cut(s) 157, 230, 393, 495, 550, 1209
BmrFI CCNGG 4 cut(s) 184, 226, 253, 750
BmsI GCATC 4 cut(s) 370, 569, 589, 636
BpiI GAAGAC 2 cut(s) 115, 641
BpmI CTGGAG 1 cut(s) 215
Bpu10I CCTNAGC 1 cut(s) 49
BpuEI CTTGAG 2 cut(s) 818, 1276
BpuMI CCSGG 1 cut(s) 253
BsaAI YACGTR 2 cut(s) 196, 312
BsaHI GRCGYC 2 cut(s) 1055, 1208
BsaI GGTCTC 1 cut(s) 1307
BsaJI CCNNGG 9 cut(s) 103, 182, 183, 252, 682, 748, 842, 1060, 1197
BsaWI WCCGGW 3 cut(s) 284, 1048, 1164
Bse118I RCCGGY 2 cut(s) 641, 1048
Bse1I ACTGG 3 cut(s) 220, 232, 946
Bse3DI GCAATG 4 cut(s) 276, 406, 555, 827
BseAI TCCGGA 2 cut(s) 284, 1164
BseBI CCWGG 3 cut(s) 184, 226, 750
BseDI CCNNGG 9 cut(s) 103, 182, 183, 252, 682, 748, 842, 1060, 1197
BseGI GGATG 1 cut(s) 627
BseMI GCAATG 4 cut(s) 276, 406, 555, 827
BseMII CTCAG 3 cut(s) 494, 663, 773
BseNI ACTGG 3 cut(s) 220, 232, 946
BseRI GAGGAG 2 cut(s) 168, 203
BseSI GKGCMC 2 cut(s) 1104, 1287
BseYI CCCAGC 3 cut(s) 503, 670, 913
BsgI GTGCAG 1 cut(s) 1303
BshFI GGCC 7 cut(s) 212, 242, 326, 681, 688, 1038, 1196
BshNI GGYRCC 2 cut(s) 493, 1207
BshTI ACCGGT 1 cut(s) 1048
BsiHKAI GWGCWC 3 cut(s) 201, 478, 1172
BsiHKCI CYCGRG 1 cut(s) 1123
BsiSI CCGG 5 cut(s) 252, 285, 642, 1049, 1165
BslFI GGGAC 5 cut(s) 257, 349, 688, 964, 1042
BsmAI GTCTC 1 cut(s) 1307
BsmFI GGGAC 5 cut(s) 257, 349, 688, 964, 1042
BsnI GGCC 7 cut(s) 212, 242, 326, 681, 688, 1038, 1196
Bso31I GGTCTC 1 cut(s) 1307
BsoBI CYCGRG 1 cut(s) 1123
Bsp1286I GDGCHC 6 cut(s) 201, 308, 478, 1104, 1172, 1287
Bsp13I TCCGGA 2 cut(s) 284, 1164
Bsp143I GATC 4 cut(s) 294, 813, 1107, 1161
Bsp19I CCATGG 1 cut(s) 1197
BspACI CCGC 7 cut(s) 159, 659, 996, 1012, 1039, 1065, 1205
BspANI GGCC 7 cut(s) 212, 242, 326, 681, 688, 1038, 1196
BspCNI CTCAG 3 cut(s) 493, 662, 774
BspEI TCCGGA 2 cut(s) 284, 1164
BspLI GGNNCC 6 cut(s) 157, 230, 393, 495, 550, 1209
BspMAI CTGCAG 1 cut(s) 527
BspMI ACCTGC 3 cut(s) 530, 616, 1166
BspPI GGATC 2 cut(s) 821, 1156
BspQI GCTCTTC 1 cut(s) 424
BspT107I GGYRCC 2 cut(s) 493, 1207
BspTNI GGTCTC 1 cut(s) 1307
BsrDI GCAATG 4 cut(s) 276, 406, 555, 827
BsrFI RCCGGY 2 cut(s) 641, 1048
BsrI ACTGG 3 cut(s) 220, 232, 946
BssAI RCCGGY 2 cut(s) 641, 1048
BssECI CCNNGG 9 cut(s) 103, 182, 183, 252, 682, 748, 842, 1060, 1197
BssMI GATC 4 cut(s) 294, 813, 1107, 1161
BssNI GRCGYC 2 cut(s) 1055, 1208
BssT1I CCWWGG 3 cut(s) 842, 1060, 1197
Bst2UI CCWGG 3 cut(s) 184, 226, 750
Bst4CI ACNGT 4 cut(s) 137, 796, 955, 973
Bst6I CTCTTC 2 cut(s) 26, 424
BstACI GRCGYC 2 cut(s) 1055, 1208
BstAPI GCANNNNNTGC 2 cut(s) 405, 667
BstBAI YACGTR 2 cut(s) 196, 312
BstC8I GCNNGC 5 cut(s) 210, 244, 488, 492, 1043
BstDEI CTNAG 4 cut(s) 49, 480, 649, 782
BstDSI CCRYGG 2 cut(s) 103, 1197
BstF5I GGATG 1 cut(s) 627
BstH2I RGCGCY 2 cut(s) 93, 1211
BstHHI GCGC 3 cut(s) 92, 947, 1210
BstKTI GATC 4 cut(s) 297, 816, 1110, 1164
BstMAI GTCTC 1 cut(s) 1307
BstMBI GATC 4 cut(s) 294, 813, 1107, 1161
BstNI CCWGG 3 cut(s) 184, 226, 750
BstNSI RCATGY 3 cut(s) 1080, 1191, 1252
BstSCI CCNGG 4 cut(s) 182, 224, 251, 748
BstSFI CTRYAG 2 cut(s) 133, 523
BstSLI GKGCMC 2 cut(s) 1104, 1287
BstV2I GAAGAC 2 cut(s) 115, 641
BstXI CCANNNNNNTGG 1 cut(s) 1192
BsuRI GGCC 7 cut(s) 212, 242, 326, 681, 688, 1038, 1196
BtgI CCRYGG 2 cut(s) 103, 1197
BtrI CACGTC 1 cut(s) 173
BtsCI GGATG 1 cut(s) 627
BtsI GCAGTG 2 cut(s) 382, 1083
BtsIMutI CAGTG 8 cut(s) 382, 488, 657, 761, 779, 939, 969, 1083
BveI ACCTGC 3 cut(s) 530, 616, 1166
Cac8I GCNNGC 5 cut(s) 210, 244, 488, 492, 1043
CaiI CAGNNNCTG 1 cut(s) 667
CfoI GCGC 3 cut(s) 92, 947, 1210
Cfr10I RCCGGY 2 cut(s) 641, 1048
Cfr13I GGNCC 3 cut(s) 155, 324, 686
CseI GACGC 2 cut(s) 270, 1147
Csp6I GTAC 5 cut(s) 166, 193, 313, 605, 820
CspAI ACCGGT 1 cut(s) 1048
CspCI CAANNNNNGTGG 2 cut(s) 298, 333
CviAII CATG 9 cut(s) 141, 358, 1077, 1117, 1129, 1135, 1188, 1198, 1249
CviQI GTAC 5 cut(s) 166, 193, 313, 605, 820
DdeI CTNAG 4 cut(s) 49, 480, 649, 782
DinI GGCGCC 1 cut(s) 1209
DpnI GATC 4 cut(s) 296, 815, 1109, 1163
DpnII GATC 4 cut(s) 294, 813, 1107, 1161
EaeI YGGCCR 5 cut(s) 210, 240, 679, 1036, 1194
Eam1104I CTCTTC 2 cut(s) 26, 424
EarI CTCTTC 2 cut(s) 26, 424
Eco130I CCWWGG 3 cut(s) 842, 1060, 1197
Eco24I GRGCYC 1 cut(s) 308
Eco31I GGTCTC 1 cut(s) 1307
Eco32I GATATC 1 cut(s) 907
Eco47I GGWCC 1 cut(s) 155
Eco88I CYCGRG 1 cut(s) 1123
EcoRII CCWGG 3 cut(s) 182, 224, 748
EcoRV GATATC 1 cut(s) 907
EcoT14I CCWWGG 3 cut(s) 842, 1060, 1197
EcoT38I GRGCYC 1 cut(s) 308
EgeI GGCGCC 1 cut(s) 1209
EheI GGCGCC 1 cut(s) 1209
ErhI CCWWGG 3 cut(s) 842, 1060, 1197
FaeI CATG 9 cut(s) 144, 361, 1080, 1120, 1132, 1138, 1191, 1201, 1252
FaqI GGGAC 5 cut(s) 257, 349, 688, 964, 1042
FatI CATG 9 cut(s) 140, 357, 1076, 1116, 1128, 1134, 1187, 1197, 1248
FauI CCCGC 3 cut(s) 166, 1003, 1058
FokI GGATG 1 cut(s) 614
FriOI GRGCYC 1 cut(s) 308
FspBI CTAG 3 cut(s) 590, 843, 986
GlaI GCGC 3 cut(s) 91, 946, 1209
GsaI CCCAGC 3 cut(s) 507, 674, 917
GsuI CTGGAG 1 cut(s) 215
HaeII RGCGCY 2 cut(s) 93, 1211
HaeIII GGCC 7 cut(s) 212, 242, 326, 681, 688, 1038, 1196
HapII CCGG 5 cut(s) 252, 285, 642, 1049, 1165
HgaI GACGC 2 cut(s) 270, 1147
HhaI GCGC 3 cut(s) 92, 947, 1210
Hin1I GRCGYC 2 cut(s) 1055, 1208
Hin1II CATG 9 cut(s) 144, 361, 1080, 1120, 1132, 1138, 1191, 1201, 1252
Hin6I GCGC 3 cut(s) 90, 945, 1208
HinP1I GCGC 3 cut(s) 90, 945, 1208
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HinfI GANTC 4 cut(s) 337, 709, 962, 1261
HpaII CCGG 5 cut(s) 252, 285, 642, 1049, 1165
HphI GGTGA 2 cut(s) 577, 1063
Hpy166II GTNNAC 4 cut(s) 367, 822, 868, 1222
Hpy188I TCNGA 3 cut(s) 155, 303, 1025
Hpy188III TCNNGA 5 cut(s) 285, 631, 835, 1150, 1165
Hpy8I GTNNAC 4 cut(s) 367, 822, 868, 1222
Hpy99I CGWCG 1 cut(s) 1100
HpyAV CCTTC 6 cut(s) 43, 160, 463, 592, 885, 1020
HpyCH4III ACNGT 4 cut(s) 137, 796, 955, 973
HpyCH4IV ACGT 5 cut(s) 172, 195, 311, 1055, 1155
HpyCH4V TGCA 9 cut(s) 87, 399, 486, 525, 560, 627, 878, 1252, 1320
HpyF3I CTNAG 4 cut(s) 49, 480, 649, 782
HpySE526I ACGT 5 cut(s) 172, 195, 311, 1055, 1155
Hsp92I GRCGYC 2 cut(s) 1055, 1208
Hsp92II CATG 9 cut(s) 144, 361, 1080, 1120, 1132, 1138, 1191, 1201, 1252
HspAI GCGC 3 cut(s) 90, 945, 1208
KasI GGCGCC 1 cut(s) 1207
Kpn2I TCCGGA 2 cut(s) 284, 1164
Kzo9I GATC 4 cut(s) 294, 813, 1107, 1161
LguI GCTCTTC 1 cut(s) 424
LmnI GCTCC 5 cut(s) 149, 204, 234, 473, 1167
LweI GCATC 4 cut(s) 370, 569, 589, 636
MaeI CTAG 3 cut(s) 590, 843, 986
MaeII ACGT 5 cut(s) 172, 195, 311, 1055, 1155
MaeIII GTNAC 6 cut(s) 535, 570, 759, 777, 988, 1051
MalI GATC 4 cut(s) 296, 815, 1109, 1163
MboI GATC 4 cut(s) 294, 813, 1107, 1161
MboII GAAGA 4 cut(s) 13, 115, 411, 646
MhlI GDGCHC 6 cut(s) 201, 308, 478, 1104, 1172, 1287
MlsI TGGCCA 3 cut(s) 212, 242, 1196
MluCI AATT 2 cut(s) 879, 897
MluNI TGGCCA 3 cut(s) 212, 242, 1196
Mly113I GGCGCC 1 cut(s) 1208
MlyI GAGTC 2 cut(s) 331, 703
MmeI TCCRAC 1 cut(s) 868
Mox20I TGGCCA 3 cut(s) 212, 242, 1196
MroI TCCGGA 2 cut(s) 284, 1164
MscI TGGCCA 3 cut(s) 212, 242, 1196
MseI TTAA 5 cut(s) 258, 432, 531, 872, 1233
MslI CAYNNNNRTG 4 cut(s) 362, 481, 1115, 1133
Msp20I TGGCCA 3 cut(s) 212, 242, 1196
MspA1I CMGCKG 2 cut(s) 507, 1205
MspI CCGG 5 cut(s) 252, 285, 642, 1049, 1165
MspR9I CCNGG 4 cut(s) 184, 226, 253, 750
MvaI CCWGG 3 cut(s) 184, 226, 750
NarI GGCGCC 1 cut(s) 1208
NciI CCSGG 1 cut(s) 253
NcoI CCATGG 1 cut(s) 1197
NdeII GATC 4 cut(s) 294, 813, 1107, 1161
NlaIII CATG 9 cut(s) 144, 361, 1080, 1120, 1132, 1138, 1191, 1201, 1252
NlaIV GGNNCC 6 cut(s) 157, 230, 393, 495, 550, 1209
NmeAIII GCCGAG 1 cut(s) 707
NmuCI GTSAC 5 cut(s) 570, 759, 777, 988, 1051
NspI RCATGY 3 cut(s) 1080, 1191, 1252
OliI CACNNNNGTG 1 cut(s) 481
PaqCI CACCTGC 1 cut(s) 530
PasI CCCWGGG 1 cut(s) 183
PciI ACATGT 1 cut(s) 1187
PciSI GCTCTTC 1 cut(s) 424
PfeI GAWTC 2 cut(s) 962, 1261
PflMI CCANNNNNTGG 2 cut(s) 208, 238
PinAI ACCGGT 1 cut(s) 1048
PleI GAGTC 2 cut(s) 331, 703
PluTI GGCGCC 1 cut(s) 1211
PpsI GAGTC 2 cut(s) 331, 703
Ppu21I YACGTR 2 cut(s) 196, 312
PscI ACATGT 1 cut(s) 1187
Psp6I CCWGG 3 cut(s) 182, 224, 748
PspFI CCCAGC 3 cut(s) 503, 670, 913
PspGI CCWGG 3 cut(s) 182, 224, 748
PspN4I GGNNCC 6 cut(s) 157, 230, 393, 495, 550, 1209
PspPI GGNCC 3 cut(s) 155, 324, 686
PstI CTGCAG 1 cut(s) 527
PstNI CAGNNNCTG 1 cut(s) 667
PvuII CAGCTG 1 cut(s) 507
RsaI GTAC 5 cut(s) 167, 194, 314, 606, 821
RsaNI GTAC 5 cut(s) 166, 193, 313, 605, 820
RseI CAYNNNNRTG 4 cut(s) 362, 481, 1115, 1133
SapI GCTCTTC 1 cut(s) 424
SaqAI TTAA 5 cut(s) 258, 432, 531, 872, 1233
Sau3AI GATC 4 cut(s) 294, 813, 1107, 1161
Sau96I GGNCC 3 cut(s) 155, 324, 686
SchI GAGTC 2 cut(s) 331, 703
ScrFI CCNGG 4 cut(s) 184, 226, 253, 750
SduI GDGCHC 6 cut(s) 201, 308, 478, 1104, 1172, 1287
SfaNI GCATC 4 cut(s) 370, 569, 589, 636
SfcI CTRYAG 2 cut(s) 133, 523
SfoI GGCGCC 1 cut(s) 1209
SinI GGWCC 1 cut(s) 155
SmiMI CAYNNNNRTG 4 cut(s) 362, 481, 1115, 1133
SmlI CTYRAG 2 cut(s) 833, 1291
SmoI CTYRAG 2 cut(s) 833, 1291
Sse9I AATT 2 cut(s) 879, 897
SsiI CCGC 7 cut(s) 159, 659, 996, 1012, 1039, 1065, 1205
SspDI GGCGCC 1 cut(s) 1207
SspMI CTAG 3 cut(s) 590, 843, 986
StyD4I CCNGG 4 cut(s) 182, 224, 251, 748
StyI CCWWGG 3 cut(s) 842, 1060, 1197
TaaI ACNGT 4 cut(s) 137, 796, 955, 973
TaiI ACGT 5 cut(s) 175, 198, 314, 1058, 1158
TaqI TCGA 3 cut(s) 903, 1071, 1149
TasI AATT 2 cut(s) 879, 897
TatI WGTACW 1 cut(s) 819
TauI GCSGC 2 cut(s) 1041, 1208
TfiI GAWTC 2 cut(s) 962, 1261
Tru1I TTAA 5 cut(s) 258, 432, 531, 872, 1233
Tru9I TTAA 5 cut(s) 258, 432, 531, 872, 1233
TscAI CASTG 8 cut(s) 382, 488, 657, 768, 786, 946, 976, 1090
TseFI GTSAC 5 cut(s) 570, 759, 777, 988, 1051
Tsp45I GTSAC 5 cut(s) 570, 759, 777, 988, 1051
TspDTI ATGAA 2 cut(s) 1105, 1145
TspRI CASTG 8 cut(s) 382, 488, 657, 768, 786, 946, 976, 1090
Van91I CCANNNNNTGG 2 cut(s) 208, 238
VpaK11BI GGWCC 1 cut(s) 155
XceI RCATGY 3 cut(s) 1080, 1191, 1252
XmaJI CCTAGG 1 cut(s) 842
XspI CTAG 3 cut(s) 590, 843, 986
ZraI GACGTC 1 cut(s) 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.