FvH4_6g44106

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000114
Physical Location & Seq
Reverse (-)
34022479 .. 34026393
3915 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g44106.t3

Sequence Viewer

Length: 1809 bp
ATGGGGTGGCTCTTGTGTTCCCTTGTAACACTGCTCTTATCTTATATCCTGTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAGTACATCACTGGTAACCACACTTTGGAATCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAGAATTCAACTAAATACTTCCTTGGTATACGATTCAACACGTTCCCAAATACTGCACTAGTATGGATTGCTAACAGAGAATCTCCGCTTGATTCTCCAGGTTTGTTTATGCTCAGCAGCGATGGAAACCTTGTGGTGTTGGATGATACTAGAAACCCTGTCTGGTCAACTAATGCTTCAATATCTGCTTCTGCAATGAATCACACAACTGGACTACTAGCGGATTCCGGAAACCTTGTTCTGAGCTTTGGAGAAGACACATTTTGGCAGAGCTTCGATCATCCCTCTGATACTATGTTGCCCGGCATTAAGATTAGCCTGAACAAAACGTCTGGCCAACGAAGGCGCCTAACATCCTGGGCAGCGCTTGATGATCCACAACCAGGAAGGTTCACATTCGGCATAGATCCTAAAGGACAAGTTCAGTGCTTTATTTGGAACAAAACTACTCGGTATTGGAGAAGTTCCATGTTTGTCGGCAAGGATACACGAACAGTGTTTCAAAATACAAGTGGAACTGCGTTTTTCCTGTCTTATAACTTTGATGTTGATGACGTTTATCTTTCTTATAGTGTCTCGGATAGCTCAATAAAATTGAGGGTCTGGTTGAGTCCGTCAGGGCAATTTAATCTGCTGCTGTGGCAGGATACTGGTAAAAAGTGGCTGGACCTGGGGACTTCACCAGGTGATAACTGTGATTTTTATGCTCGTTGCGGTCCCAATAGTTCCTGTCGTAGAGGTGAATACCTAACCTCATCACCATGCAAGTGTTTGACTGGCTTCAAAGCCAAGTTTCCTAACCAATCGGCAGTGGGGGATTGGTCCGGTGGCTGTGTTAGGGAAAATGTGTTGACATGTGGTAGCGGCATAAAAGGCAATTTCTCAAAGCTTGAAATGGTGAATCTGCCGGATTATTCTGTTTTGTTAAACAATAGGAGTATGAGCGAGTGTGAATCTGAATGTCGGCAGAACTGTTCTTGCACAGCTTATGCTTATGTTAATGGGACAGATGGAAGTACAGGGACTTGTTTGGCATGGTTTGGCGAATTACTGGATCTAGTTGAGAATTACAATATTGATGCACATGATGTCTATATTCGTGTTCACGGCTCTGAATTAGGCAAAACTGGACTTTCTGCTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCATTTGGATTTCTTACAATAACTTTTGGCTATTTCTTATGGAAGAAAAAATTTGGGAGGATATCAAGAGTGAGTGGGAATACAAGTAAGGTTACTGCAGGAGGTGGGAAGAATGATACAGAACTACCACTCTTCAGTTTGAGGAGTATATTAGCTGCTACAAACAACTTCTCTGAAGGAAATAAACTTGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGAATTTTGCCGGAAAATCAAGAAGCAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCATGAATGAGTTGAAACTTATAGCCAACCTCCAACATACCAATCTTGCTCGTCTCTTGGGTTGCTGTATGGAAGAAGATGAACTCATATTGATCTACGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTGTTTGGTAGATATGGGAATTATGCAAAGAAGGTAGTGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

603

Amino Acids

66.63

Weight (kDa)

7.77

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 172 2.2e-29 D-mannose binding lectin
S_locus_glycop PF00954 231 - 316 2.8e-18 S-locus glycoprotein domain
PAN_2 PF08276 344 - 405 4.1e-14 PAN-like domain
Pkinase PF00069 504 - 590 3.5e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 506 - 590 2.2e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 693, 1554
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 501
AccB7I CCANNNNNTGG 1 cut(s) 112
AccI GTMKAC 1 cut(s) 184
AccIII TCCGGA 1 cut(s) 383
AciI CCGC 5 cut(s) 242, 377, 870, 1020, 1309
AclWI GGATC 3 cut(s) 524, 557, 1218
AcoI YGGCCR 2 cut(s) 490, 1587
AcsI RAATTY 4 cut(s) 160, 1388, 1560, 1760
AcuI CTGAAG 2 cut(s) 1456, 1533
AcyI GRCGYC 1 cut(s) 502
AdeI CACNNNGTG 1 cut(s) 842
AfaI GTAC 5 cut(s) 61, 81, 92, 1174, 1736
AfeI AGCGCT 1 cut(s) 522
AfiI CCNNNNNNNGG 4 cut(s) 112, 539, 1308, 1596
AflIII ACRYGT 2 cut(s) 195, 1010
AgsI TTSAA 9 cut(s) 151, 165, 193, 336, 659, 940, 1049, 1306, 1648
AhlI ACTAGT 1 cut(s) 214
AjnI CCWGG 6 cut(s) 82, 253, 512, 538, 825, 838
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
AluBI AGCT 6 cut(s) 402, 429, 741, 1045, 1142, 1493
AluI AGCT 6 cut(s) 402, 429, 741, 1045, 1142, 1493
Alw26I GTCTC 3 cut(s) 736, 1336, 1691
AlwI GGATC 3 cut(s) 524, 557, 1218
Aor13HI TCCGGA 1 cut(s) 383
Aor51HI AGCGCT 1 cut(s) 522
AoxI GGCC 3 cut(s) 490, 1543, 1587
ApeKI GCWGC 5 cut(s) 273, 518, 790, 1337, 1493
ApoI RAATTY 4 cut(s) 160, 1388, 1560, 1760
AspLEI GCGC 2 cut(s) 504, 523
AspS9I GGNCC 6 cut(s) 129, 823, 872, 978, 1311, 1544
AsuC2I CCSGG 1 cut(s) 459
AsuHPI GGTGA 5 cut(s) 828, 854, 906, 908, 1066
AvaII GGWCC 5 cut(s) 129, 823, 872, 978, 1311
BalI TGGCCA 2 cut(s) 492, 1589
BanI GGYRCC 1 cut(s) 501
BbsI GAAGAC 1 cut(s) 417
BbvI GCAGC 5 cut(s) 285, 530, 777, 1349, 1480
BccI CCATC 2 cut(s) 272, 1160
BceAI ACGGC 1 cut(s) 1279
BciT130I CCWGG 6 cut(s) 84, 255, 514, 540, 827, 840
BciVI GTATCC 2 cut(s) 634, 796
BcnI CCSGG 1 cut(s) 459
BcoDI GTCTC 3 cut(s) 736, 1336, 1691
BcuI ACTAGT 1 cut(s) 214
BfaI CTAG 4 cut(s) 215, 306, 374, 1214
BfmI CTRYAG 2 cut(s) 1335, 1434
BfoI RGCGCY 2 cut(s) 505, 524
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 2 cut(s) 634, 796
BisI GCNGC 6 cut(s) 274, 519, 791, 1021, 1338, 1494
BlpI GCTNAGC 1 cut(s) 269
BlsI GCNGC 6 cut(s) 275, 520, 792, 1022, 1339, 1495
Bme1390I CCNGG 7 cut(s) 84, 255, 459, 514, 540, 827, 840
Bme18I GGWCC 5 cut(s) 129, 823, 872, 978, 1311
BmgT120I GGNCC 6 cut(s) 129, 823, 872, 978, 1311, 1544
BmiI GGNNCC 4 cut(s) 130, 503, 874, 1313
BmrFI CCNGG 7 cut(s) 84, 255, 459, 514, 540, 827, 840
BmsI GCATC 1 cut(s) 1225
BpiI GAAGAC 1 cut(s) 417
BpmI CTGGAG 1 cut(s) 237
Bpu1102I GCTNAGC 1 cut(s) 269
BpuMI CCSGG 1 cut(s) 459
BsaHI GRCGYC 1 cut(s) 502
BsaJI CCNNGG 4 cut(s) 124, 178, 513, 826
BsaWI WCCGGW 2 cut(s) 383, 980
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 539, 1308, 1596
Bse1I ACTGG 6 cut(s) 103, 370, 811, 937, 1212, 1288
Bse3DI GCAATG 1 cut(s) 357
BseAI TCCGGA 1 cut(s) 383
BseBI CCWGG 6 cut(s) 84, 255, 514, 540, 827, 840
BseDI CCNNGG 4 cut(s) 124, 178, 513, 826
BseGI GGATG 3 cut(s) 304, 436, 509
BseLI CCNNNNNNNGG 4 cut(s) 112, 539, 1308, 1596
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 3 cut(s) 147, 283, 389
BseNI ACTGG 6 cut(s) 103, 370, 811, 937, 1212, 1288
BseRI GAGGAG 1 cut(s) 1495
BseXI GCAGC 5 cut(s) 285, 530, 777, 1349, 1480
BsgI GTGCAG 1 cut(s) 195
BshFI GGCC 3 cut(s) 492, 1545, 1589
BshNI GGYRCC 1 cut(s) 501
BsiSI CCGG 5 cut(s) 384, 459, 981, 1064, 1568
BslFI GGGAC 5 cut(s) 142, 844, 858, 1174, 1192
BslI CCNNNNNNNGG 4 cut(s) 112, 539, 1308, 1596
BsmAI GTCTC 3 cut(s) 736, 1336, 1691
BsmBI CGTCTC 1 cut(s) 1691
BsmFI GGGAC 5 cut(s) 142, 844, 858, 1174, 1192
BsnI GGCC 3 cut(s) 492, 1545, 1589
Bsp13I TCCGGA 1 cut(s) 383
Bsp143I GATC 5 cut(s) 433, 529, 562, 1210, 1725
Bsp1720I GCTNAGC 1 cut(s) 269
BspACI CCGC 5 cut(s) 242, 377, 870, 1020, 1309
BspANI GGCC 3 cut(s) 492, 1545, 1589
BspCNI CTCAG 3 cut(s) 148, 282, 390
BspEI TCCGGA 1 cut(s) 383
BspHI TCATGA 2 cut(s) 1627, 1635
BspLI GGNNCC 4 cut(s) 130, 503, 874, 1313
BspMAI CTGCAG 2 cut(s) 1339, 1438
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 3 cut(s) 524, 557, 1218
BspT107I GGYRCC 1 cut(s) 501
BsrDI GCAATG 1 cut(s) 357
BsrI ACTGG 6 cut(s) 103, 370, 811, 937, 1212, 1288
BssECI CCNNGG 4 cut(s) 124, 178, 513, 826
BssMI GATC 5 cut(s) 433, 529, 562, 1210, 1725
BssNAI GTATAC 1 cut(s) 185
BssNI GRCGYC 1 cut(s) 502
BssT1I CCWWGG 2 cut(s) 124, 178
Bst1107I GTATAC 1 cut(s) 185
Bst2UI CCWGG 6 cut(s) 84, 255, 514, 540, 827, 840
Bst4CI ACNGT 4 cut(s) 90, 652, 851, 1130
Bst6I CTCTTC 1 cut(s) 1475
BstACI GRCGYC 1 cut(s) 502
BstDEI CTNAG 3 cut(s) 156, 269, 398
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 3 cut(s) 304, 436, 509
BstH2I RGCGCY 2 cut(s) 505, 524
BstHHI GCGC 2 cut(s) 504, 523
BstKTI GATC 5 cut(s) 436, 532, 565, 1213, 1728
BstMAI GTCTC 3 cut(s) 736, 1336, 1691
BstMBI GATC 5 cut(s) 433, 529, 562, 1210, 1725
BstMWI GCNNNNNNNGC 2 cut(s) 796, 1029
BstNI CCWGG 6 cut(s) 84, 255, 514, 540, 827, 840
BstNSI RCATGY 2 cut(s) 1014, 1741
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 7 cut(s) 82, 253, 457, 512, 538, 825, 838
BstSFI CTRYAG 2 cut(s) 1335, 1434
BstV1I GCAGC 5 cut(s) 285, 530, 777, 1349, 1480
BstV2I GAAGAC 1 cut(s) 417
BstX2I RGATCY 2 cut(s) 562, 1210
BstYI RGATCY 2 cut(s) 562, 1210
BstZ17I GTATAC 1 cut(s) 185
BsuI GTATCC 2 cut(s) 634, 796
BsuRI GGCC 3 cut(s) 492, 1545, 1589
BtgZI GCGATG 1 cut(s) 291
BtsCI GGATG 3 cut(s) 304, 436, 509
BtsI GCAGTG 3 cut(s) 29, 972, 1590
BtsIMutI CAGTG 6 cut(s) 29, 96, 587, 657, 972, 1590
BveI ACCTGC 1 cut(s) 71
CciI TCATGA 2 cut(s) 1627, 1635
CfoI GCGC 2 cut(s) 504, 523
Cfr13I GGNCC 6 cut(s) 129, 823, 872, 978, 1311, 1544
CsiI ACCWGGT 1 cut(s) 838
Csp6I GTAC 5 cut(s) 60, 80, 91, 1173, 1735
CviAII CATG 8 cut(s) 625, 918, 1011, 1191, 1241, 1628, 1636, 1738
CviQI GTAC 5 cut(s) 60, 80, 91, 1173, 1735
DdeI CTNAG 3 cut(s) 156, 269, 398
DinI GGCGCC 1 cut(s) 503
DpnI GATC 5 cut(s) 435, 531, 564, 1212, 1727
DpnII GATC 5 cut(s) 433, 529, 562, 1210, 1725
DraIII CACNNNGTG 1 cut(s) 842
EaeI YGGCCR 2 cut(s) 490, 1587
Eam1104I CTCTTC 1 cut(s) 1475
EarI CTCTTC 1 cut(s) 1475
Eco130I CCWWGG 2 cut(s) 124, 178
Eco32I GATATC 1 cut(s) 1401
Eco47I GGWCC 5 cut(s) 129, 823, 872, 978, 1311
Eco47III AGCGCT 1 cut(s) 522
Eco57I CTGAAG 2 cut(s) 1456, 1533
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 160
EcoRII CCWGG 6 cut(s) 82, 253, 512, 538, 825, 838
EcoRV GATATC 1 cut(s) 1401
EcoT14I CCWWGG 2 cut(s) 124, 178
EgeI GGCGCC 1 cut(s) 503
EheI GGCGCC 1 cut(s) 503
ErhI CCWWGG 2 cut(s) 124, 178
Esp3I CGTCTC 1 cut(s) 1691
FaeI CATG 8 cut(s) 628, 921, 1014, 1194, 1244, 1631, 1639, 1741
FaqI GGGAC 5 cut(s) 142, 844, 858, 1174, 1192
FatI CATG 8 cut(s) 624, 917, 1010, 1190, 1240, 1627, 1635, 1737
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 6 cut(s) 274, 519, 791, 1021, 1338, 1494
FokI GGATG 3 cut(s) 311, 423, 496
Fsp4HI GCNGC 6 cut(s) 274, 519, 791, 1021, 1338, 1494
FspBI CTAG 4 cut(s) 215, 306, 374, 1214
GlaI GCGC 2 cut(s) 503, 522
GluI GCNGC 6 cut(s) 274, 519, 791, 1021, 1338, 1494
GsuI CTGGAG 1 cut(s) 237
HaeII RGCGCY 2 cut(s) 505, 524
HaeIII GGCC 3 cut(s) 492, 1545, 1589
HapII CCGG 5 cut(s) 384, 459, 981, 1064, 1568
HhaI GCGC 2 cut(s) 504, 523
Hin1I GRCGYC 1 cut(s) 502
Hin1II CATG 8 cut(s) 628, 921, 1014, 1194, 1244, 1631, 1639, 1741
Hin6I GCGC 2 cut(s) 502, 521
HinP1I GCGC 2 cut(s) 502, 521
HincII GTYRAC 2 cut(s) 324, 1008
HindII GTYRAC 2 cut(s) 324, 1008
HindIII AAGCTT 1 cut(s) 1043
HinfI GANTC 9 cut(s) 116, 189, 236, 248, 355, 380, 766, 1057, 1109
HpaII CCGG 5 cut(s) 384, 459, 981, 1064, 1568
HphI GGTGA 5 cut(s) 828, 854, 906, 908, 1066
Hpy166II GTNNAC 5 cut(s) 185, 324, 549, 1008, 1261
Hpy188I TCNGA 6 cut(s) 399, 445, 736, 1114, 1270, 1513
Hpy188III TCNNGA 6 cut(s) 155, 384, 1404, 1577, 1628, 1636
Hpy8I GTNNAC 5 cut(s) 185, 324, 549, 1008, 1261
HpyAV CCTTC 4 cut(s) 492, 537, 1508, 1789
HpyCH4III ACNGT 4 cut(s) 90, 652, 851, 1130
HpyCH4IV ACGT 3 cut(s) 197, 485, 711
HpyCH4V TGCA 9 cut(s) 212, 350, 921, 1137, 1238, 1325, 1337, 1436, 1790
HpyF10VI GCNNNNNNNGC 2 cut(s) 796, 1029
HpyF3I CTNAG 3 cut(s) 156, 269, 398
HpySE526I ACGT 3 cut(s) 197, 485, 711
Hsp92I GRCGYC 1 cut(s) 502
Hsp92II CATG 8 cut(s) 628, 921, 1014, 1194, 1244, 1631, 1639, 1741
HspAI GCGC 2 cut(s) 502, 521
KasI GGCGCC 1 cut(s) 501
Kpn2I TCCGGA 1 cut(s) 383
Kzo9I GATC 5 cut(s) 433, 529, 562, 1210, 1725
Lsp1109I GCAGC 5 cut(s) 285, 530, 777, 1349, 1480
LweI GCATC 1 cut(s) 1225
MabI ACCWGGT 1 cut(s) 838
MaeI CTAG 4 cut(s) 215, 306, 374, 1214
MaeII ACGT 3 cut(s) 197, 485, 711
MaeIII GTNAC 3 cut(s) 25, 101, 1429
MalI GATC 5 cut(s) 435, 531, 564, 1212, 1727
MboI GATC 5 cut(s) 433, 529, 562, 1210, 1725
MboII GAAGA 8 cut(s) 111, 139, 422, 1393, 1459, 1462, 1718, 1721
MflI RGATCY 2 cut(s) 562, 1210
MlsI TGGCCA 2 cut(s) 492, 1589
MluNI TGGCCA 2 cut(s) 492, 1589
Mly113I GGCGCC 1 cut(s) 502
MlyI GAGTC 1 cut(s) 775
MmeI TCCRAC 2 cut(s) 276, 1690
Mox20I TGGCCA 2 cut(s) 492, 1589
MroI TCCGGA 1 cut(s) 383
MscI TGGCCA 2 cut(s) 492, 1589
MseI TTAA 4 cut(s) 465, 783, 1082, 1155
MslI CAYNNNNRTG 3 cut(s) 217, 916, 922
Msp20I TGGCCA 2 cut(s) 492, 1589
MspI CCGG 5 cut(s) 384, 459, 981, 1064, 1568
MspR9I CCNGG 7 cut(s) 84, 255, 459, 514, 540, 827, 840
MvaI CCWGG 6 cut(s) 84, 255, 514, 540, 827, 840
MwoI GCNNNNNNNGC 2 cut(s) 796, 1029
NarI GGCGCC 1 cut(s) 502
NciI CCSGG 1 cut(s) 459
NdeII GATC 5 cut(s) 433, 529, 562, 1210, 1725
NlaIII CATG 8 cut(s) 628, 921, 1014, 1194, 1244, 1631, 1639, 1741
NlaIV GGNNCC 4 cut(s) 130, 503, 874, 1313
NspI RCATGY 2 cut(s) 1014, 1741
PagI TCATGA 2 cut(s) 1627, 1635
PciI ACATGT 1 cut(s) 1010
PfeI GAWTC 8 cut(s) 116, 189, 236, 248, 355, 380, 1057, 1109
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 6 cut(s) 275, 520, 792, 1022, 1339, 1495
PleI GAGTC 1 cut(s) 774
PluTI GGCGCC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 774
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 1 cut(s) 1010
PsiI TTATAA 2 cut(s) 693, 1554
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 6 cut(s) 82, 253, 512, 538, 825, 838
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 6 cut(s) 82, 253, 512, 538, 825, 838
PspN4I GGNNCC 4 cut(s) 130, 503, 874, 1313
PspPI GGNCC 6 cut(s) 129, 823, 872, 978, 1311, 1544
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 2 cut(s) 1339, 1438
PsuI RGATCY 2 cut(s) 562, 1210
RsaI GTAC 5 cut(s) 61, 81, 92, 1174, 1736
RsaNI GTAC 5 cut(s) 60, 80, 91, 1173, 1735
RseI CAYNNNNRTG 3 cut(s) 217, 916, 922
SaqAI TTAA 4 cut(s) 465, 783, 1082, 1155
SatI GCNGC 6 cut(s) 274, 519, 791, 1021, 1338, 1494
Sau3AI GATC 5 cut(s) 433, 529, 562, 1210, 1725
Sau96I GGNCC 6 cut(s) 129, 823, 872, 978, 1311, 1544
SchI GAGTC 1 cut(s) 775
ScrFI CCNGG 7 cut(s) 84, 255, 459, 514, 540, 827, 840
SexAI ACCWGGT 1 cut(s) 838
SfaNI GCATC 1 cut(s) 1225
SfcI CTRYAG 2 cut(s) 1335, 1434
SfoI GGCGCC 1 cut(s) 503
SinI GGWCC 5 cut(s) 129, 823, 872, 978, 1311
SmiMI CAYNNNNRTG 3 cut(s) 217, 916, 922
SpeI ACTAGT 1 cut(s) 214
SsiI CCGC 5 cut(s) 242, 377, 870, 1020, 1309
SspDI GGCGCC 1 cut(s) 501
SspI AATATT 1 cut(s) 1231
SspMI CTAG 4 cut(s) 215, 306, 374, 1214
StyD4I CCNGG 7 cut(s) 82, 253, 457, 512, 538, 825, 838
StyI CCWWGG 2 cut(s) 124, 178
TaaI ACNGT 4 cut(s) 90, 652, 851, 1130
TaiI ACGT 3 cut(s) 200, 488, 714
TaqI TCGA 2 cut(s) 432, 1747
TatI WGTACW 3 cut(s) 90, 1172, 1734
TauI GCSGC 1 cut(s) 1023
TfiI GAWTC 8 cut(s) 116, 189, 236, 248, 355, 380, 1057, 1109
Tru1I TTAA 4 cut(s) 465, 783, 1082, 1155
Tru9I TTAA 4 cut(s) 465, 783, 1082, 1155
TscAI CASTG 6 cut(s) 36, 103, 587, 657, 972, 1590
TseI GCWGC 5 cut(s) 273, 518, 790, 1337, 1493
TspDTI ATGAA 5 cut(s) 126, 368, 1624, 1652, 1728
TspGWI ACGGA 1 cut(s) 759
TspRI CASTG 6 cut(s) 36, 103, 587, 657, 972, 1590
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 5 cut(s) 129, 823, 872, 978, 1311
XapI RAATTY 4 cut(s) 160, 1388, 1560, 1760
XceI RCATGY 2 cut(s) 1014, 1741
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 4 cut(s) 215, 306, 374, 1214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.