Rh2CG570900

receptor-like protein kinase At1g67000

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
75057668 .. 75058177
510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG570900.1

Sequence Viewer

Length: 435 bp
ATGAGAAATATCAACTTCAGAATTCTTGAGATGAACTCTAGTAGTACAGATCGGGCTGTTAAAGTTGCTAGGAACGATTATTGGAAAACTATCTGCCCCATTTCTTATGTTAACACCAGCATCGACTTTTCTCTGTTCAATTATGGTTCTGGGCTTCAGAACATGTCTTTTTACTACGGATGTAATTCTACTTCAAATCCTACAGGGTTCAATGTTTCCCTTGTTTGCAACAGTAGTGTCACTGTCTCCTATCTCACACAATCACAAACTAGTGGACTCCCGTTTAGTCCAGTTTCTACTGGGGCATGCGAAAGTGAGGTTCTGGTTCCGGTTTCCGAAACGGCTGTTTTGGCTCTTGATAACAATCAAACGACGATCCAAGAAGCCATCGATGGGGGTTTCGTACTGGGATTGAAGTGCATGCAACAATTGTGA

Protein Analysis

144

Amino Acids

15.68

Weight (kDa)

4.65

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 370
AcsI RAATTY 1 cut(s) 21
AcuI CTGAAG 1 cut(s) 140
AfaI GTAC 2 cut(s) 46, 405
AfiI CCNNNNNNNGG 1 cut(s) 393
AflIII ACRYGT 1 cut(s) 162
AgsI TTSAA 4 cut(s) 139, 195, 211, 415
AhlI ACTAGT 1 cut(s) 269
Alw26I GTCTC 1 cut(s) 250
AlwI GGATC 1 cut(s) 370
ApoI RAATTY 1 cut(s) 21
BarI GAAGNNNNNNTAC 2 cut(s) 175, 207
BccI CCATC 2 cut(s) 386, 395
BceAI ACGGC 1 cut(s) 357
BcoDI GTCTC 1 cut(s) 250
BcuI ACTAGT 1 cut(s) 269
BfaI CTAG 3 cut(s) 39, 69, 270
BfmI CTRYAG 1 cut(s) 201
BmiI GGNNCC 1 cut(s) 327
BmrI ACTGGG 2 cut(s) 309, 416
BmsI GCATC 1 cut(s) 129
BmuI ACTGGG 2 cut(s) 309, 416
BplI GAGNNNNNCTC 2 cut(s) 20, 52
BpuEI CTTGAG 1 cut(s) 47
Bsa29I ATCGAT 1 cut(s) 390
BsaBI GATNNNNATC 1 cut(s) 363
BsaWI WCCGGW 1 cut(s) 328
Bsc4I CCNNNNNNNGG 1 cut(s) 393
Bse1I ACTGG 3 cut(s) 290, 304, 411
Bse8I GATNNNNATC 1 cut(s) 363
BseCI ATCGAT 1 cut(s) 390
BseGI GGATG 1 cut(s) 185
BseJI GATNNNNATC 1 cut(s) 363
BseLI CCNNNNNNNGG 1 cut(s) 393
BseNI ACTGG 3 cut(s) 290, 304, 411
BshVI ATCGAT 1 cut(s) 390
BsiSI CCGG 1 cut(s) 329
BslI CCNNNNNNNGG 1 cut(s) 393
BsmAI GTCTC 1 cut(s) 250
Bsp143I GATC 2 cut(s) 49, 375
BspDI ATCGAT 1 cut(s) 390
BspLI GGNNCC 1 cut(s) 327
BspPI GGATC 1 cut(s) 370
BsrI ACTGG 3 cut(s) 290, 304, 411
BssMI GATC 2 cut(s) 49, 375
Bst4CI ACNGT 2 cut(s) 233, 244
BstC8I GCNNGC 2 cut(s) 307, 422
BstF5I GGATG 1 cut(s) 185
BstKTI GATC 2 cut(s) 52, 378
BstMAI GTCTC 1 cut(s) 250
BstMBI GATC 2 cut(s) 49, 375
BstMWI GCNNNNNNNGC 1 cut(s) 350
BstNSI RCATGY 3 cut(s) 166, 309, 424
BstSFI CTRYAG 1 cut(s) 201
Bsu15I ATCGAT 1 cut(s) 390
BsuTUI ATCGAT 1 cut(s) 390
BtsCI GGATG 1 cut(s) 185
BtsIMutI CAGTG 1 cut(s) 240
Cac8I GCNNGC 2 cut(s) 307, 422
ClaI ATCGAT 1 cut(s) 390
Csp6I GTAC 2 cut(s) 45, 404
CviAII CATG 3 cut(s) 163, 306, 421
CviJI RGCY 5 cut(s) 56, 154, 344, 353, 386
CviKI_1 RGCY 5 cut(s) 56, 154, 344, 353, 386
CviQI GTAC 2 cut(s) 45, 404
DpnI GATC 2 cut(s) 51, 377
DpnII GATC 2 cut(s) 49, 375
Eco57I CTGAAG 1 cut(s) 140
EcoRI GAATTC 1 cut(s) 21
FaeI CATG 3 cut(s) 166, 309, 424
FaiI YATR 5 cut(s) 108, 144, 164, 307, 422
FatI CATG 3 cut(s) 162, 305, 420
FokI GGATG 1 cut(s) 192
FspBI CTAG 3 cut(s) 39, 69, 270
HapII CCGG 1 cut(s) 329
Hin1II CATG 3 cut(s) 166, 309, 424
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HinfI GANTC 1 cut(s) 276
HpaI GTTAAC 1 cut(s) 112
HpaII CCGG 1 cut(s) 329
Hpy166II GTNNAC 2 cut(s) 112, 275
Hpy188I TCNGA 3 cut(s) 20, 159, 337
Hpy188III TCNNGA 2 cut(s) 26, 356
Hpy8I GTNNAC 2 cut(s) 112, 275
Hpy99I CGWCG 1 cut(s) 376
HpyCH4III ACNGT 2 cut(s) 233, 244
HpyCH4V TGCA 3 cut(s) 228, 420, 424
HpyF10VI GCNNNNNNNGC 1 cut(s) 350
Hsp92II CATG 3 cut(s) 166, 309, 424
KspAI GTTAAC 1 cut(s) 112
Kzo9I GATC 2 cut(s) 49, 375
LpnPI CCDG 8 cut(s) 130, 135, 189, 285, 303, 308, 342, 392
LweI GCATC 1 cut(s) 129
MaeI CTAG 3 cut(s) 39, 69, 270
MaeIII GTNAC 1 cut(s) 238
MalI GATC 2 cut(s) 51, 377
MboI GATC 2 cut(s) 49, 375
MfeI CAATTG 1 cut(s) 428
MluCI AATT 4 cut(s) 21, 139, 184, 428
MlyI GAGTC 1 cut(s) 270
MnlI CCTC 1 cut(s) 310
MseI TTAA 2 cut(s) 60, 111
MspI CCGG 1 cut(s) 329
MunI CAATTG 1 cut(s) 428
MwoI GCNNNNNNNGC 1 cut(s) 350
NdeII GATC 2 cut(s) 49, 375
NlaIII CATG 3 cut(s) 166, 309, 424
NlaIV GGNNCC 1 cut(s) 327
NmuCI GTSAC 1 cut(s) 238
NspI RCATGY 3 cut(s) 166, 309, 424
PaeI GCATGC 2 cut(s) 309, 424
PciI ACATGT 1 cut(s) 162
PleI GAGTC 1 cut(s) 270
PpsI GAGTC 1 cut(s) 270
PscI ACATGT 1 cut(s) 162
PspN4I GGNNCC 1 cut(s) 327
RsaI GTAC 2 cut(s) 46, 405
RsaNI GTAC 2 cut(s) 45, 404
SaqAI TTAA 2 cut(s) 60, 111
Sau3AI GATC 2 cut(s) 49, 375
SchI GAGTC 1 cut(s) 270
SetI ASST 1 cut(s) 321
SfaNI GCATC 1 cut(s) 129
SfcI CTRYAG 1 cut(s) 201
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
SpeI ACTAGT 1 cut(s) 269
SphI GCATGC 2 cut(s) 309, 424
Sse9I AATT 4 cut(s) 21, 139, 184, 428
SspMI CTAG 3 cut(s) 39, 69, 270
TaaI ACNGT 2 cut(s) 233, 244
TaqI TCGA 2 cut(s) 123, 390
TasI AATT 4 cut(s) 21, 139, 184, 428
TatI WGTACW 1 cut(s) 44
Tru1I TTAA 2 cut(s) 60, 111
Tru9I TTAA 2 cut(s) 60, 111
TscAI CASTG 1 cut(s) 247
TseFI GTSAC 1 cut(s) 238
Tsp45I GTSAC 1 cut(s) 238
TspDTI ATGAA 1 cut(s) 47
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 1 cut(s) 247
XapI RAATTY 1 cut(s) 21
XceI RCATGY 3 cut(s) 166, 309, 424
XspI CTAG 3 cut(s) 39, 69, 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.