Rmu_sc0005189.1_g000006

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005189.1
OG0000114
Physical Location & Seq
Reverse (-)
17097 .. 21368
4272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005189.1_g000006.1.cds

Sequence Viewer

Length: 2076 bp
atgactttggtttcttccttagagaccttttcattaggcttcttcaatcctgaaaattctactaaatacttccttggtatacgattcaacaaattcccaaatactgcatcagtatgggtagctaatagagaatctccacttgattctccgggtttctttatgctcagcagcgatggaaatcttgtggtgttggatcaggctaaaaaacttgtctggtcaactaatgcatccgtatctgcttctgcaatgaatcacacaactggattactagaggataccggaaaccttgttctgagccttgaagaagtcactttatggcagagcttcgatcatccctgtgatactatgttgcctggcatgaagattagcttgaacaaaaagactggccaacaaaggcgccttacatcctgggctgcgcttgatgatccacaacccggaaagttcaccttgggcatagatcctaaagtaccagttcaggcctttatctggaaggaaactactccaatagaaagaagtcctctgtacattggcaaggatataagaacagcgtttcaaaatccaggtggaacggcgtttttcctttcatacaactttgatgttgatgatgtttatcttacttacattgtctcggatagctcagtaaaattgagggtctggttggatcctacagggctagttaaattgcagttctggcagaattctactaaaacgtggttggaacaagggacttcaccgcccgttcataactgtgatttttatgcttattgcggtcccaatagtgcctgtcatagtggtgaacccctgtcatcaccatgcaagtgtttgactggttttacagccaagtttcggaaccaatcggcagtgggggattggtccagtggctgcattagggaaaaggtgttgacatgtggtaacggcatacaaggtaacttttcaaagcttgaaaaggtgaaactgccggatcattctgtactgttaaacaataggagtatgaacgagtgtgaatctgaatgtcggcggaactgttcttgcacggcttatgcttgtgtatatgcgacagatggaagtaatattgggacatgcttggcatggtttggcaaattactggatctagtagagaattttaacgactctagacatgatatctattttcgtgttcatggctccgaactaggcaaaaagggtctttctgttaattccttgaagcggacccttgtaattgcaatagtctctgcagcagttggattgcttacaataacttttggctatttcttttggaagaaaaaattggaaaagaaaggaggtggaaagaatgatacagaattaccaatcttcagtttaaggagtatgttagctgctacaaacaacttctctgaagcgaataaacttggagaggggggattcggccctgtttataagggaattttgcaagaaaatcaagaagtggccataaagaggctatcaaagacgtctgggcaaggacataatgagttcaagaatgagttgaaacttatagccaaactccagcataccaatcttgtaaggctattgggttgctgtatggaaggagatgaaatgatattgatctatgagtacatgtctaatcgaagtttggacaaatttttgtttgatccttttgaaaagacaagattagattgggatacacgctttcgaattgtacaaggtattgctcaaggagtactatatattcacaagtactctacattgaaaatcatccacagagatctgaaagcaagtaatgttctgttggatggaacaatgaaccccaaagtgtccgactttggaatggcgagaatttttgatataaatcaaattgaagcaaataccaacaaggttgttgggacatacataagcaacgacctcttaggtgggccccgcggtatggttagccccgcctatgacatgcatcaggtaaaccgacacccgagctacgttgccatggtggaggtcggccggtatctagtcgggaggctactctcccatgctctccaaaaggcttcaagagtgtattatgtcccacatcggaaatgtaaactagatggagacttcctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

691

Amino Acids

77.24

Weight (kDa)

8.7

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1416
AatII GACGTC 1 cut(s) 1472
AccB1I GGYRCC 1 cut(s) 396
AccI GTMKAC 1 cut(s) 79
AccII CGCG 1 cut(s) 1899
AciI CCGC 7 cut(s) 734, 768, 1018, 1207, 1897, 1899, 1914
AclWI GGATC 8 cut(s) 201, 419, 452, 656, 669, 969, 1116, 1625
AcoI YGGCCR 3 cut(s) 385, 1446, 1972
AcsI RAATTY 7 cut(s) 55, 92, 697, 1120, 1422, 1619, 1815
AcuI CTGAAG 2 cut(s) 1318, 1395
AcyI GRCGYC 2 cut(s) 397, 1469
AfaI GTAC 7 cut(s) 468, 524, 972, 1595, 1680, 1701, 1718
AfiI CCNNNNNNNGG 6 cut(s) 434, 486, 846, 1206, 1455, 1903
AflIII ACRYGT 2 cut(s) 905, 1596
AjnI CCWGG 3 cut(s) 352, 407, 559
AjuI GAANNNNNNNTTGG 2 cut(s) 1271, 1303
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 7 cut(s) 122, 324, 369, 636, 940, 1355, 1950
AluI AGCT 7 cut(s) 122, 324, 369, 636, 940, 1355, 1950
Alw26I GTCTC 4 cut(s) 17, 631, 1234, 2058
AlwI GGATC 8 cut(s) 201, 419, 452, 656, 669, 969, 1116, 1625
AlwNI CAGNNNCTG 1 cut(s) 882
Ama87I CYCGRG 1 cut(s) 1945
AoxI GGCC 6 cut(s) 385, 477, 1405, 1446, 1892, 1972
ApaI GGGCCC 1 cut(s) 1896
ApeKI GCWGC 5 cut(s) 168, 413, 882, 1235, 1355
ApoI RAATTY 7 cut(s) 55, 92, 697, 1120, 1422, 1619, 1815
AspLEI GCGC 2 cut(s) 399, 418
AspS9I GGNCC 6 cut(s) 770, 873, 1209, 1406, 1892, 1893
AsuC2I CCSGG 2 cut(s) 150, 435
AsuHPI GGTGA 5 cut(s) 436, 723, 801, 806, 961
AsuII TTCGAA 1 cut(s) 1672
AvaI CYCGRG 1 cut(s) 1945
AvaII GGWCC 3 cut(s) 770, 873, 1209
BaeGI GKGCMC 1 cut(s) 1896
BalI TGGCCA 2 cut(s) 387, 1448
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 1 cut(s) 396
BanII GRGCYC 1 cut(s) 1896
BbvI GCAGC 5 cut(s) 180, 400, 869, 1247, 1342
BccI CCATC 4 cut(s) 167, 1055, 1766, 2054
BceAI ACGGC 3 cut(s) 585, 931, 1050
BciT130I CCWGG 3 cut(s) 354, 409, 561
BciVI GTATCC 2 cut(s) 268, 1654
BcnI CCSGG 2 cut(s) 150, 435
BcoDI GTCTC 4 cut(s) 17, 631, 1234, 2058
BfaI CTAG 7 cut(s) 269, 674, 1112, 1134, 1172, 1982, 2057
BfmI CTRYAG 2 cut(s) 666, 1233
BfoI RGCGCY 1 cut(s) 400
BfuI GTATCC 2 cut(s) 268, 1654
BglII AGATCT 1 cut(s) 1744
BisI GCNGC 5 cut(s) 169, 414, 883, 1236, 1356
BlpI GCTNAGC 1 cut(s) 164
BlsI GCNGC 5 cut(s) 170, 415, 884, 1237, 1357
BmcAI AGTACT 2 cut(s) 1701, 1718
Bme1390I CCNGG 5 cut(s) 150, 354, 409, 435, 561
Bme18I GGWCC 3 cut(s) 770, 873, 1209
BmeT110I CYCGRG 1 cut(s) 1945
BmgT120I GGNCC 6 cut(s) 770, 873, 1209, 1406, 1892, 1893
BmiI GGNNCC 8 cut(s) 398, 663, 772, 851, 1165, 1211, 1894, 1895
BmrFI CCNGG 5 cut(s) 150, 354, 409, 435, 561
BmsI GCATC 3 cut(s) 116, 236, 1936
BpmI CTGGAG 1 cut(s) 1508
Bpu1102I GCTNAGC 1 cut(s) 164
Bpu14I TTCGAA 1 cut(s) 1672
BpuEI CTTGAG 1 cut(s) 1677
BpuMI CCSGG 2 cut(s) 150, 435
BsaBI GATNNNNATC 4 cut(s) 177, 609, 1583, 1827
BsaHI GRCGYC 2 cut(s) 397, 1469
BsaI GGTCTC 1 cut(s) 17
BsaJI CCNNGG 5 cut(s) 73, 408, 447, 1897, 1959
BsaWI WCCGGW 1 cut(s) 278
Bsc4I CCNNNNNNNGG 6 cut(s) 434, 486, 846, 1206, 1455, 1903
Bse118I RCCGGY 1 cut(s) 1974
Bse1I ACTGG 6 cut(s) 265, 388, 470, 832, 876, 1110
Bse3DI GCAATG 1 cut(s) 252
Bse8I GATNNNNATC 4 cut(s) 177, 609, 1583, 1827
BseBI CCWGG 3 cut(s) 354, 409, 561
BseDI CCNNGG 5 cut(s) 73, 408, 447, 1897, 1959
BseGI GGATG 5 cut(s) 227, 331, 404, 1734, 1777
BseJI GATNNNNATC 4 cut(s) 177, 609, 1583, 1827
BseLI CCNNNNNNNGG 6 cut(s) 434, 486, 846, 1206, 1455, 1903
BseMI GCAATG 1 cut(s) 252
BseMII CTCAG 3 cut(s) 178, 284, 651
BseNI ACTGG 6 cut(s) 265, 388, 470, 832, 876, 1110
BseSI GKGCMC 1 cut(s) 1896
BseX3I CGGCCG 1 cut(s) 1972
BseXI GCAGC 5 cut(s) 180, 400, 869, 1247, 1342
Bsh1236I CGCG 1 cut(s) 1899
Bsh1285I CGRYCG 1 cut(s) 1975
BshFI GGCC 6 cut(s) 387, 479, 1407, 1448, 1894, 1974
BshNI GGYRCC 1 cut(s) 396
BsiEI CGRYCG 1 cut(s) 1975
BsiHKCI CYCGRG 1 cut(s) 1945
BsiSI CCGG 5 cut(s) 149, 279, 435, 959, 1975
BslFI GGGAC 5 cut(s) 739, 756, 1090, 1876, 2021
BslI CCNNNNNNNGG 6 cut(s) 434, 486, 846, 1206, 1455, 1903
BsmAI GTCTC 4 cut(s) 17, 631, 1234, 2058
BsmFI GGGAC 5 cut(s) 739, 756, 1090, 1876, 2021
BsnI GGCC 6 cut(s) 387, 479, 1407, 1448, 1894, 1974
Bso31I GGTCTC 1 cut(s) 17
BsoBI CYCGRG 1 cut(s) 1945
Bsp119I TTCGAA 1 cut(s) 1672
Bsp120I GGGCCC 1 cut(s) 1892
Bsp1286I GDGCHC 1 cut(s) 1896
Bsp1407I TGTACA 2 cut(s) 522, 1678
Bsp1720I GCTNAGC 1 cut(s) 164
Bsp19I CCATGG 1 cut(s) 1959
BspACI CCGC 7 cut(s) 734, 768, 1018, 1207, 1897, 1899, 1914
BspANI GGCC 6 cut(s) 387, 479, 1407, 1448, 1894, 1974
BspCNI CTCAG 3 cut(s) 177, 285, 650
BspFNI CGCG 1 cut(s) 1899
BspLI GGNNCC 8 cut(s) 398, 663, 772, 851, 1165, 1211, 1894, 1895
BspMAI CTGCAG 1 cut(s) 1237
BspPI GGATC 8 cut(s) 201, 419, 452, 656, 669, 969, 1116, 1625
BspT104I TTCGAA 1 cut(s) 1672
BspT107I GGYRCC 1 cut(s) 396
BspTNI GGTCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 252
BsrFI RCCGGY 1 cut(s) 1974
BsrGI TGTACA 2 cut(s) 522, 1678
BsrI ACTGG 6 cut(s) 265, 388, 470, 832, 876, 1110
BssAI RCCGGY 1 cut(s) 1974
BssECI CCNNGG 5 cut(s) 73, 408, 447, 1897, 1959
BssNAI GTATAC 1 cut(s) 80
BssNI GRCGYC 2 cut(s) 397, 1469
BssT1I CCWWGG 3 cut(s) 73, 447, 1959
Bst1107I GTATAC 1 cut(s) 80
Bst2UI CCWGG 3 cut(s) 354, 409, 561
Bst4CI ACNGT 3 cut(s) 749, 975, 1025
BstACI GRCGYC 2 cut(s) 397, 1469
BstAUI TGTACA 2 cut(s) 522, 1678
BstBI TTCGAA 1 cut(s) 1672
BstDEI CTNAG 5 cut(s) 19, 164, 293, 637, 1885
BstDSI CCRYGG 2 cut(s) 1897, 1959
BstF5I GGATG 5 cut(s) 227, 331, 404, 1734, 1777
BstFNI CGCG 1 cut(s) 1899
BstH2I RGCGCY 1 cut(s) 400
BstHHI GCGC 2 cut(s) 399, 418
BstMAI GTCTC 4 cut(s) 17, 631, 1234, 2058
BstMCI CGRYCG 1 cut(s) 1975
BstMWI GCNNNNNNNGC 1 cut(s) 691
BstNI CCWGG 3 cut(s) 354, 409, 561
BstNSI RCATGY 4 cut(s) 909, 1083, 1600, 1927
BstSCI CCNGG 5 cut(s) 148, 352, 407, 433, 559
BstSFI CTRYAG 2 cut(s) 666, 1233
BstSLI GKGCMC 1 cut(s) 1896
BstUI CGCG 1 cut(s) 1899
BstV1I GCAGC 5 cut(s) 180, 400, 869, 1247, 1342
BstX2I RGATCY 4 cut(s) 457, 661, 1108, 1744
BstYI RGATCY 4 cut(s) 457, 661, 1108, 1744
BstZ17I GTATAC 1 cut(s) 80
BstZI CGGCCG 1 cut(s) 1972
BsuI GTATCC 2 cut(s) 268, 1654
BsuRI GGCC 6 cut(s) 387, 479, 1407, 1448, 1894, 1974
BtgI CCRYGG 2 cut(s) 1897, 1959
BtgZI GCGATG 1 cut(s) 186
BtsCI GGATG 5 cut(s) 227, 331, 404, 1734, 1777
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 2 cut(s) 867, 883
CaiI CAGNNNCTG 1 cut(s) 882
CfoI GCGC 2 cut(s) 399, 418
Cfr10I RCCGGY 1 cut(s) 1974
Cfr13I GGNCC 6 cut(s) 770, 873, 1209, 1406, 1892, 1893
Cfr42I CCGCGG 1 cut(s) 1900
Csp6I GTAC 7 cut(s) 467, 523, 971, 1594, 1679, 1700, 1717
CviQI GTAC 7 cut(s) 467, 523, 971, 1594, 1679, 1700, 1717
DdeI CTNAG 5 cut(s) 19, 164, 293, 637, 1885
DinI GGCGCC 1 cut(s) 398
EaeI YGGCCR 3 cut(s) 385, 1446, 1972
EagI CGGCCG 1 cut(s) 1972
EciI GGCGGA 1 cut(s) 1033
EclXI CGGCCG 1 cut(s) 1972
Eco130I CCWWGG 3 cut(s) 73, 447, 1959
Eco147I AGGCCT 1 cut(s) 479
Eco24I GRGCYC 1 cut(s) 1896
Eco31I GGTCTC 1 cut(s) 17
Eco32I GATATC 1 cut(s) 1144
Eco47I GGWCC 3 cut(s) 770, 873, 1209
Eco52I CGGCCG 1 cut(s) 1972
Eco57I CTGAAG 2 cut(s) 1318, 1395
Eco88I CYCGRG 1 cut(s) 1945
EcoO109I RGGNCCY 1 cut(s) 1893
EcoRI GAATTC 1 cut(s) 697
EcoRII CCWGG 3 cut(s) 352, 407, 559
EcoRV GATATC 1 cut(s) 1144
EcoT14I CCWWGG 3 cut(s) 73, 447, 1959
EcoT22I ATGCAT 2 cut(s) 229, 1929
EcoT38I GRGCYC 1 cut(s) 1896
EgeI GGCGCC 1 cut(s) 398
EheI GGCGCC 1 cut(s) 398
ErhI CCWWGG 3 cut(s) 73, 447, 1959
FalI AAGNNNNNCTT 4 cut(s) 353, 385, 431, 463
FaqI GGGAC 5 cut(s) 739, 756, 1090, 1876, 2021
FauI CCCGC 2 cut(s) 1904, 1921
FblI GTMKAC 1 cut(s) 79
Fnu4HI GCNGC 5 cut(s) 169, 414, 883, 1236, 1356
FokI GGATG 5 cut(s) 214, 318, 391, 1721, 1784
FriOI GRGCYC 1 cut(s) 1896
Fsp4HI GCNGC 5 cut(s) 169, 414, 883, 1236, 1356
FspBI CTAG 7 cut(s) 269, 674, 1112, 1134, 1172, 1982, 2057
GlaI GCGC 2 cut(s) 398, 417
GluI GCNGC 5 cut(s) 169, 414, 883, 1236, 1356
GsuI CTGGAG 1 cut(s) 1508
HaeII RGCGCY 1 cut(s) 400
HaeIII GGCC 6 cut(s) 387, 479, 1407, 1448, 1894, 1974
HapII CCGG 5 cut(s) 149, 279, 435, 959, 1975
HhaI GCGC 2 cut(s) 399, 418
Hin1I GRCGYC 2 cut(s) 397, 1469
Hin6I GCGC 2 cut(s) 397, 416
HinP1I GCGC 2 cut(s) 397, 416
HincII GTYRAC 2 cut(s) 219, 903
HindII GTYRAC 2 cut(s) 219, 903
HindIII AAGCTT 1 cut(s) 938
HinfI GANTC 7 cut(s) 84, 131, 143, 250, 1004, 1130, 1401
HpaII CCGG 5 cut(s) 149, 279, 435, 959, 1975
HphI GGTGA 5 cut(s) 436, 723, 801, 806, 961
Hpy166II GTNNAC 7 cut(s) 80, 219, 444, 797, 903, 1936, 2054
Hpy188I TCNGA 9 cut(s) 294, 631, 849, 1009, 1168, 1375, 1749, 1798, 2046
Hpy188III TCNNGA 7 cut(s) 50, 487, 1134, 1439, 1495, 1987, 2022
Hpy8I GTNNAC 7 cut(s) 80, 219, 444, 797, 903, 1936, 2054
HpyAV CCTTC 2 cut(s) 484, 1559
HpyCH4III ACNGT 3 cut(s) 749, 975, 1025
HpyCH4IV ACGT 3 cut(s) 710, 1469, 1953
HpyF10VI GCNNNNNNNGC 1 cut(s) 691
HpyF3I CTNAG 5 cut(s) 19, 164, 293, 637, 1885
HpySE526I ACGT 3 cut(s) 710, 1469, 1953
Hsp92I GRCGYC 2 cut(s) 397, 1469
HspAI GCGC 2 cut(s) 397, 416
KasI GGCGCC 1 cut(s) 396
KspI CCGCGG 1 cut(s) 1900
LmnI GCTCC 1 cut(s) 1169
Lsp1109I GCAGC 5 cut(s) 180, 400, 869, 1247, 1342
LweI GCATC 3 cut(s) 116, 236, 1936
MaeI CTAG 7 cut(s) 269, 674, 1112, 1134, 1172, 1982, 2057
MaeII ACGT 3 cut(s) 710, 1469, 1953
MaeIII GTNAC 3 cut(s) 307, 911, 926
MboII GAAGA 6 cut(s) 6, 34, 314, 373, 1291, 1324
MflI RGATCY 4 cut(s) 457, 661, 1108, 1744
MhlI GDGCHC 1 cut(s) 1896
MlsI TGGCCA 2 cut(s) 387, 1448
MluNI TGGCCA 2 cut(s) 387, 1448
Mly113I GGCGCC 1 cut(s) 397
MlyI GAGTC 1 cut(s) 1124
MmeI TCCRAC 6 cut(s) 171, 639, 696, 1222, 1749, 1821
MnlI CCTC 9 cut(s) 265, 528, 642, 1295, 1387, 1449, 1892, 1960, 1983
Mox20I TGGCCA 2 cut(s) 387, 1448
Mph1103I ATGCAT 2 cut(s) 229, 1929
MscI TGGCCA 2 cut(s) 387, 1448
MseI TTAA 5 cut(s) 678, 977, 1125, 1194, 1340
MslI CAYNNNNRTG 6 cut(s) 112, 336, 747, 792, 811, 817
Msp20I TGGCCA 2 cut(s) 387, 1448
MspA1I CMGCKG 1 cut(s) 1899
MspI CCGG 5 cut(s) 149, 279, 435, 959, 1975
MspR9I CCNGG 5 cut(s) 150, 354, 409, 435, 561
MvaI CCWGG 3 cut(s) 354, 409, 561
MvnI CGCG 1 cut(s) 1899
MwoI GCNNNNNNNGC 1 cut(s) 691
NarI GGCGCC 1 cut(s) 397
NciI CCSGG 2 cut(s) 150, 435
NcoI CCATGG 1 cut(s) 1959
NlaIV GGNNCC 8 cut(s) 398, 663, 772, 851, 1165, 1211, 1894, 1895
NmuCI GTSAC 1 cut(s) 307
NsiI ATGCAT 2 cut(s) 229, 1929
NspI RCATGY 4 cut(s) 909, 1083, 1600, 1927
NspV TTCGAA 1 cut(s) 1672
PceI AGGCCT 1 cut(s) 479
PciI ACATGT 2 cut(s) 905, 1596
PfeI GAWTC 6 cut(s) 84, 131, 143, 250, 1004, 1401
PkrI GCNGC 5 cut(s) 170, 415, 884, 1237, 1357
PleI GAGTC 1 cut(s) 1124
PluTI GGCGCC 1 cut(s) 400
PpsI GAGTC 1 cut(s) 1124
PscI ACATGT 2 cut(s) 905, 1596
PsiI TTATAA 1 cut(s) 1416
Psp6I CCWGG 3 cut(s) 352, 407, 559
PspGI CCWGG 3 cut(s) 352, 407, 559
PspN4I GGNNCC 8 cut(s) 398, 663, 772, 851, 1165, 1211, 1894, 1895
PspOMI GGGCCC 1 cut(s) 1892
PspPI GGNCC 6 cut(s) 770, 873, 1209, 1406, 1892, 1893
PstI CTGCAG 1 cut(s) 1237
PstNI CAGNNNCTG 1 cut(s) 882
PsuI RGATCY 4 cut(s) 457, 661, 1108, 1744
RsaI GTAC 7 cut(s) 468, 524, 972, 1595, 1680, 1701, 1718
RsaNI GTAC 7 cut(s) 467, 523, 971, 1594, 1679, 1700, 1717
RseI CAYNNNNRTG 6 cut(s) 112, 336, 747, 792, 811, 817
SacII CCGCGG 1 cut(s) 1900
SaqAI TTAA 5 cut(s) 678, 977, 1125, 1194, 1340
SatI GCNGC 5 cut(s) 169, 414, 883, 1236, 1356
Sau96I GGNCC 6 cut(s) 770, 873, 1209, 1406, 1892, 1893
ScaI AGTACT 2 cut(s) 1701, 1718
SchI GAGTC 1 cut(s) 1124
ScrFI CCNGG 5 cut(s) 150, 354, 409, 435, 561
SduI GDGCHC 1 cut(s) 1896
SfaNI GCATC 3 cut(s) 116, 236, 1936
SfcI CTRYAG 2 cut(s) 666, 1233
SfoI GGCGCC 1 cut(s) 398
Sfr303I CCGCGG 1 cut(s) 1900
SfuI TTCGAA 1 cut(s) 1672
SgrBI CCGCGG 1 cut(s) 1900
SinI GGWCC 3 cut(s) 770, 873, 1209
SmiMI CAYNNNNRTG 6 cut(s) 112, 336, 747, 792, 811, 817
SmlI CTYRAG 1 cut(s) 1692
SmoI CTYRAG 1 cut(s) 1692
SseBI AGGCCT 1 cut(s) 479
SsiI CCGC 7 cut(s) 734, 768, 1018, 1207, 1897, 1899, 1914
SspDI GGCGCC 1 cut(s) 396
SspI AATATT 1 cut(s) 1072
SspMI CTAG 7 cut(s) 269, 674, 1112, 1134, 1172, 1982, 2057
StuI AGGCCT 1 cut(s) 479
StyD4I CCNGG 5 cut(s) 148, 352, 407, 433, 559
StyI CCWWGG 3 cut(s) 73, 447, 1959
TaaI ACNGT 3 cut(s) 749, 975, 1025
TaiI ACGT 3 cut(s) 713, 1472, 1956
TaqI TCGA 3 cut(s) 327, 1606, 1672
TatI WGTACW 6 cut(s) 522, 970, 1593, 1678, 1699, 1716
TfiI GAWTC 6 cut(s) 84, 131, 143, 250, 1004, 1401
Tru1I TTAA 5 cut(s) 678, 977, 1125, 1194, 1340
Tru9I TTAA 5 cut(s) 678, 977, 1125, 1194, 1340
TscAI CASTG 2 cut(s) 867, 883
TseFI GTSAC 1 cut(s) 307
TseI GCWGC 5 cut(s) 168, 413, 882, 1235, 1355
Tsp45I GTSAC 1 cut(s) 307
TspDTI ATGAA 9 cut(s) 21, 263, 374, 573, 731, 1007, 1148, 1587, 1796
TspGWI ACGGA 1 cut(s) 220
TspRI CASTG 2 cut(s) 867, 883
VpaK11BI GGWCC 3 cut(s) 770, 873, 1209
XapI RAATTY 7 cut(s) 55, 92, 697, 1120, 1422, 1619, 1815
XbaI TCTAGA 1 cut(s) 1133
XceI RCATGY 4 cut(s) 909, 1083, 1600, 1927
XmiI GTMKAC 1 cut(s) 79
XspI CTAG 7 cut(s) 269, 674, 1112, 1134, 1172, 1982, 2057
ZraI GACGTC 1 cut(s) 1470
ZrmI AGTACT 2 cut(s) 1701, 1718
Zsp2I ATGCAT 2 cut(s) 229, 1929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.