FvH4_6g44240

divergent subfamily of APPLE domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000114
Physical Location & Seq
Reverse (-)
34088050 .. 34091460
3411 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g44240.t1

Sequence Viewer

Length: 1800 bp
ATGCTCAGCAGCGATGGGAACCTTGTAGTGTTGGATGATACTAGAAACCTTGTCTGGTCAACTAATGCTTCAATATCTGCTTCTGAAATGAATCACACAACTGGACAACTAGCTGACACCGGAAACGTTGTTCTGAGCTTTGGAGAAGTCACCCTTTGGCAGAGCTTCGATCATCCCTCTGATACTATGTTGCCCGGCATGAAGATTACCTTGAACAAAAAGACTGGCCAACGAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACTCGGAAACTTCACCTTTGGCATTGATCCTCAAGTACCACTTCAGGGCATTATCTGGAAGGAAACTCTTCCCTATTTTAGAAGTTCTGTGTTCGTTGGCAAGGATACAAGAACAGAGTTTCCAAGTGGATCAGCGTTTTTCCTTCTTACAACTTTGATATTGATGAGAATCTGGTTGAGTGCTACAGGGCAACTTACACAGCTGCTGTGGCAGAATTCTAGTACATCGTGGTTGGAACTGGATAATTCACCTGGCGATAACTGTGATTTTTACGCTCATTGCGGTCCCAATAGTGCCTGTCGCAGAGGTGAATCCCTGTCATCATCACCATGCAAATGTTTGACTGGTTTTAAATCCAAGTTTCCGAACCAATCGGCGATGGGGGACTGGTCCGGTGGCTGTGTTAGGGAAAAGGTGTTGACATGTAGTAACGGCATACAAGAAAACTTTTTGAGGCTTGAAAACGTGAAACCGCCGGACCATACTGTTCTGTTAAACAACAAGAGTTTGAGCGAGTGTGAGTCCGAATGTCAGCAGAACTGTTCTTGCACAGCTTATGCTTATGTAAATGGGACAAATGGAAGTACTGGGAAATGTTTGGCATGGTTTGGCGAATTACTGGATCTAGTTGAGAATCAGAATACTGGAACACATGATGTCTATATTCGTGTTCACGGCTCTGAATTAGGAGATAGGAAGAATGATACAGAACTACCACTCTTCAGTTTAAGGAGTATATTAGCTGCTACAAACACCTACTCTGAAGATAATAAACTTGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGAGTTTTGCCGGAAAATCAAGAAGTGGCTGTCAAGAGACTATCAAAGAAGTATGGACAAGGGCATCATGAGTTCATGAATGAGTTGAAACTTATAGCCAAACTCCAGCATACCAATCTTGCTCGTCTGTTGGGTTGCTGTATGGAAGAAGATGAACTCATATTGGTCTATGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTGTTTGACAAAGTTGGACAAGGTATTGCTCAAGGAGTACTATATATTCACAAATACTTTAGACTGAAAATCATCCACAGAGATCTAAAAGCAAGTAATGTGCTATTGGATGGAATGATGAATCCCAAAGTGTCTGACTTTGGAATGGCGAGGATTTTTGATACAAATCAGATTGAAGCAAATACCAACAAGCTTTGCATATCAGTTAGGAGTAAAGACATTTTTAAACATAAGATATGGGAATTATGGAAAGAAGGTAGAGGAATGGAGGCAATTGACGCATCAGTAAGGGAGACATGCCGGATTCATGAAGCTTTCCATGTCGGGATTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCGGTGATTCATATGCTAGAGGTCGATGAAGCTACATCACTTCCACCCTCAAAAGAACCTGCTTTTTCAACAAGTTGGAATTTAAGTTCTGTTATCACTTGTTCTGAAAATGCAGTCACTATTACTTTGCCAGAACCACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin GUB_WAK_bind PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

600

Amino Acids

66.77

Weight (kDa)

5.81

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 2 - 84 2.5e-24 D-mannose binding lectin
S_locus_glycop PF00954 136 - 211 3e-15 S-locus glycoprotein domain
PAN_2 PF08276 238 - 300 2.4e-16 PAN-like domain
Pkinase PF00069 344 - 485 5e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 347 - 495 6e-30 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1077
Acc36I ACCTGC 1 cut(s) 1723
AccB1I GGYRCC 1 cut(s) 237
AciI CCGC 2 cut(s) 555, 746
AclI AACGTT 1 cut(s) 126
AclWI GGATC 4 cut(s) 260, 293, 409, 903
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 3 cut(s) 487, 1280, 1735
AcuI CTGAAG 3 cut(s) 299, 979, 1056
AcyI GRCGYC 1 cut(s) 238
AfaI GTAC 5 cut(s) 309, 496, 859, 1256, 1323
AfeI AGCGCT 1 cut(s) 258
AfiI CCNNNNNNNGG 2 cut(s) 275, 317
AflIII ACRYGT 1 cut(s) 695
AgsI TTSAA 7 cut(s) 72, 214, 734, 1168, 1460, 1625, 1725
AjnI CCWGG 2 cut(s) 248, 523
AloI GAACNNNNNNTCC 6 cut(s) 114, 146, 376, 408, 1726, 1758
Alw26I GTCTC 2 cut(s) 1111, 1571
AlwI GGATC 4 cut(s) 260, 293, 409, 903
AlwNI CAGNNNCTG 1 cut(s) 478
Aor51HI AGCGCT 1 cut(s) 258
AoxI GGCC 2 cut(s) 226, 1066
ApeKI GCWGC 4 cut(s) 9, 254, 475, 1016
ApoI RAATTY 3 cut(s) 487, 1280, 1735
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 2 cut(s) 240, 259
AspS9I GGNCC 4 cut(s) 557, 663, 751, 1067
AsuC2I CCSGG 1 cut(s) 195
AsuHPI GGTGA 6 cut(s) 142, 277, 513, 591, 593, 1672
AvaII GGWCC 3 cut(s) 557, 663, 751
BalI TGGCCA 1 cut(s) 228
BanI GGYRCC 1 cut(s) 237
BarI GAAGNNNNNNTAC 2 cut(s) 226, 258
BbvI GCAGC 4 cut(s) 21, 266, 462, 1003
BccI CCATC 3 cut(s) 8, 646, 1388
BceAI ACGGC 2 cut(s) 721, 964
BciT130I CCWGG 2 cut(s) 250, 525
BciVI GTATCC 1 cut(s) 370
BcnI CCSGG 1 cut(s) 195
BcoDI GTCTC 2 cut(s) 1111, 1571
BfaI CTAG 5 cut(s) 42, 110, 492, 899, 1673
BfmI CTRYAG 1 cut(s) 456
BfoI RGCGCY 2 cut(s) 241, 260
BfuAI ACCTGC 1 cut(s) 1723
BfuI GTATCC 1 cut(s) 370
BglII AGATCT 1 cut(s) 1366
BisI GCNGC 4 cut(s) 10, 255, 476, 1017
BlpI GCTNAGC 1 cut(s) 5
BlsI GCNGC 4 cut(s) 11, 256, 477, 1018
BmcAI AGTACT 2 cut(s) 859, 1323
Bme1390I CCNGG 3 cut(s) 195, 250, 525
Bme18I GGWCC 3 cut(s) 557, 663, 751
BmgT120I GGNCC 4 cut(s) 557, 663, 751, 1067
BmiI GGNNCC 3 cut(s) 20, 239, 559
BmrFI CCNGG 3 cut(s) 195, 250, 525
BmrI ACTGGG 1 cut(s) 870
BmsI GCATC 2 cut(s) 1153, 1574
BmuI ACTGGG 1 cut(s) 870
BpmI CTGGAG 2 cut(s) 1169, 1617
Bpu1102I GCTNAGC 1 cut(s) 5
BpuEI CTTGAG 2 cut(s) 288, 1299
BpuMI CCSGG 1 cut(s) 195
BsaBI GATNNNNATC 2 cut(s) 440, 1449
BsaHI GRCGYC 1 cut(s) 238
BsaJI CCNNGG 1 cut(s) 249
BsaWI WCCGGW 2 cut(s) 119, 665
Bsc4I CCNNNNNNNGG 2 cut(s) 275, 317
Bse1I ACTGG 8 cut(s) 106, 229, 516, 622, 665, 865, 897, 922
Bse3DI GCAATG 1 cut(s) 550
Bse8I GATNNNNATC 2 cut(s) 440, 1449
BseBI CCWGG 2 cut(s) 250, 525
BseDI CCNNGG 1 cut(s) 249
BseGI GGATG 5 cut(s) 40, 172, 245, 1356, 1399
BseJI GATNNNNATC 2 cut(s) 440, 1449
BseLI CCNNNNNNNGG 2 cut(s) 275, 317
BseMI GCAATG 1 cut(s) 550
BseMII CTCAG 2 cut(s) 19, 125
BseNI ACTGG 8 cut(s) 106, 229, 516, 622, 665, 865, 897, 922
BseXI GCAGC 4 cut(s) 21, 266, 462, 1003
BshFI GGCC 2 cut(s) 228, 1068
BshNI GGYRCC 1 cut(s) 237
BsiSI CCGG 6 cut(s) 120, 195, 666, 749, 1091, 1585
BslFI GGGAC 3 cut(s) 543, 671, 859
BslI CCNNNNNNNGG 2 cut(s) 275, 317
BsmAI GTCTC 2 cut(s) 1111, 1571
BsmFI GGGAC 3 cut(s) 543, 671, 859
BsnI GGCC 2 cut(s) 228, 1068
Bsp143I GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
Bsp1720I GCTNAGC 1 cut(s) 5
BspACI CCGC 2 cut(s) 555, 746
BspANI GGCC 2 cut(s) 228, 1068
BspCNI CTCAG 2 cut(s) 18, 126
BspHI TCATGA 3 cut(s) 1147, 1155, 1591
BspLI GGNNCC 3 cut(s) 20, 239, 559
BspMI ACCTGC 1 cut(s) 1723
BspPI GGATC 4 cut(s) 260, 293, 409, 903
BspT107I GGYRCC 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 550
BsrI ACTGG 8 cut(s) 106, 229, 516, 622, 665, 865, 897, 922
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
BssNI GRCGYC 1 cut(s) 238
Bst2UI CCWGG 2 cut(s) 250, 525
Bst4CI ACNGT 3 cut(s) 536, 760, 815
Bst6I CTCTTC 2 cut(s) 345, 998
BstACI GRCGYC 1 cut(s) 238
BstDEI CTNAG 2 cut(s) 5, 134
BstF5I GGATG 5 cut(s) 40, 172, 245, 1356, 1399
BstH2I RGCGCY 2 cut(s) 241, 260
BstHHI GCGC 2 cut(s) 240, 259
BstKTI GATC 7 cut(s) 172, 268, 301, 404, 898, 1369, 1642
BstMAI GTCTC 2 cut(s) 1111, 1571
BstMBI GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
BstMWI GCNNNNNNNGC 2 cut(s) 481, 1562
BstNI CCWGG 2 cut(s) 250, 525
BstNSI RCATGY 3 cut(s) 699, 1261, 1584
BstSCI CCNGG 3 cut(s) 193, 248, 523
BstSFI CTRYAG 1 cut(s) 456
BstV1I GCAGC 4 cut(s) 21, 266, 462, 1003
BstX2I RGATCY 2 cut(s) 895, 1366
BstYI RGATCY 2 cut(s) 895, 1366
BsuI GTATCC 1 cut(s) 370
BsuRI GGCC 2 cut(s) 228, 1068
BtgZI GCGATG 2 cut(s) 27, 665
BtsCI GGATG 5 cut(s) 40, 172, 245, 1356, 1399
BveI ACCTGC 1 cut(s) 1723
CaiI CAGNNNCTG 1 cut(s) 478
CciI TCATGA 3 cut(s) 1147, 1155, 1591
CfoI GCGC 2 cut(s) 240, 259
Cfr13I GGNCC 4 cut(s) 557, 663, 751, 1067
CseI GACGC 1 cut(s) 1571
Csp6I GTAC 5 cut(s) 308, 495, 858, 1255, 1322
CviQI GTAC 5 cut(s) 308, 495, 858, 1255, 1322
DdeI CTNAG 2 cut(s) 5, 134
DinI GGCGCC 1 cut(s) 239
DpnI GATC 7 cut(s) 171, 267, 300, 403, 897, 1368, 1641
DpnII GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
DraI TTTAAA 2 cut(s) 625, 1510
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 2 cut(s) 345, 998
EarI CTCTTC 2 cut(s) 345, 998
Eco47I GGWCC 3 cut(s) 557, 663, 751
Eco47III AGCGCT 1 cut(s) 258
Eco57I CTGAAG 3 cut(s) 299, 979, 1056
EcoRI GAATTC 1 cut(s) 487
EcoRII CCWGG 2 cut(s) 248, 523
EgeI GGCGCC 1 cut(s) 239
EheI GGCGCC 1 cut(s) 239
FalI AAGNNNNNCTT 6 cut(s) 138, 170, 194, 226, 297, 329
FaqI GGGAC 3 cut(s) 543, 671, 859
FauNDI CATATG 1 cut(s) 1668
Fnu4HI GCNGC 4 cut(s) 10, 255, 476, 1017
FokI GGATG 5 cut(s) 47, 159, 232, 1343, 1406
Fsp4HI GCNGC 4 cut(s) 10, 255, 476, 1017
FspBI CTAG 5 cut(s) 42, 110, 492, 899, 1673
GlaI GCGC 2 cut(s) 239, 258
GluI GCNGC 4 cut(s) 10, 255, 476, 1017
GsuI CTGGAG 2 cut(s) 1169, 1617
HaeII RGCGCY 2 cut(s) 241, 260
HaeIII GGCC 2 cut(s) 228, 1068
HapII CCGG 6 cut(s) 120, 195, 666, 749, 1091, 1585
HgaI GACGC 1 cut(s) 1571
HhaI GCGC 2 cut(s) 240, 259
Hin1I GRCGYC 1 cut(s) 238
Hin6I GCGC 2 cut(s) 238, 257
HinP1I GCGC 2 cut(s) 238, 257
HincII GTYRAC 2 cut(s) 60, 693
HindII GTYRAC 2 cut(s) 60, 693
HindIII AAGCTT 2 cut(s) 1475, 1596
HinfI GANTC 8 cut(s) 91, 441, 584, 794, 907, 1405, 1588, 1663
HpaII CCGG 6 cut(s) 120, 195, 666, 749, 1091, 1585
HphI GGTGA 6 cut(s) 142, 277, 513, 591, 593, 1672
Hpy166II GTNNAC 3 cut(s) 60, 693, 946
Hpy188III TCNNGA 8 cut(s) 328, 1100, 1114, 1148, 1156, 1592, 1609, 1625
Hpy8I GTNNAC 3 cut(s) 60, 693, 946
HpyAV CCTTC 4 cut(s) 228, 325, 425, 1532
HpyCH4III ACNGT 3 cut(s) 536, 760, 815
HpyCH4IV ACGT 2 cut(s) 126, 738
HpyCH4V TGCA 4 cut(s) 606, 822, 1482, 1769
HpyF10VI GCNNNNNNNGC 2 cut(s) 481, 1562
HpyF3I CTNAG 2 cut(s) 5, 134
HpySE526I ACGT 2 cut(s) 126, 738
Hsp92I GRCGYC 1 cut(s) 238
HspAI GCGC 2 cut(s) 238, 257
KasI GGCGCC 1 cut(s) 237
Kzo9I GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
LmnI GCTCC 1 cut(s) 1636
Lsp1109I GCAGC 4 cut(s) 21, 266, 462, 1003
LweI GCATC 2 cut(s) 1153, 1574
MaeI CTAG 5 cut(s) 42, 110, 492, 899, 1673
MaeII ACGT 2 cut(s) 126, 738
MaeIII GTNAC 3 cut(s) 148, 701, 1771
MalI GATC 7 cut(s) 171, 267, 300, 403, 897, 1368, 1641
MboI GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
MboII GAAGA 7 cut(s) 214, 332, 982, 985, 1049, 1238, 1241
MfeI CAATTG 1 cut(s) 1557
MflI RGATCY 2 cut(s) 895, 1366
MlsI TGGCCA 1 cut(s) 228
MluCI AATT 8 cut(s) 487, 517, 887, 956, 1280, 1526, 1557, 1735
MluNI TGGCCA 1 cut(s) 228
Mly113I GGCGCC 1 cut(s) 238
MlyI GAGTC 1 cut(s) 803
MmeI TCCRAC 4 cut(s) 12, 486, 1279, 1712
Mox20I TGGCCA 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 339
MscI TGGCCA 1 cut(s) 228
MseI TTAA 5 cut(s) 624, 767, 1001, 1509, 1739
MslI CAYNNNNRTG 2 cut(s) 601, 607
Msp20I TGGCCA 1 cut(s) 228
MspA1I CMGCKG 2 cut(s) 475, 1637
MspI CCGG 6 cut(s) 120, 195, 666, 749, 1091, 1585
MspR9I CCNGG 3 cut(s) 195, 250, 525
MunI CAATTG 1 cut(s) 1557
MvaI CCWGG 2 cut(s) 250, 525
MwoI GCNNNNNNNGC 2 cut(s) 481, 1562
NarI GGCGCC 1 cut(s) 238
NciI CCSGG 1 cut(s) 195
NdeI CATATG 1 cut(s) 1668
NdeII GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
NlaIV GGNNCC 3 cut(s) 20, 239, 559
NmuCI GTSAC 2 cut(s) 148, 1771
NspI RCATGY 3 cut(s) 699, 1261, 1584
PagI TCATGA 3 cut(s) 1147, 1155, 1591
PciI ACATGT 1 cut(s) 695
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 7 cut(s) 91, 441, 584, 907, 1405, 1588, 1663
PkrI GCNGC 4 cut(s) 11, 256, 477, 1018
PleI GAGTC 1 cut(s) 802
PluTI GGCGCC 1 cut(s) 241
PpsI GAGTC 1 cut(s) 802
PscI ACATGT 1 cut(s) 695
PsiI TTATAA 1 cut(s) 1077
Psp1406I AACGTT 1 cut(s) 126
Psp6I CCWGG 2 cut(s) 248, 523
PspGI CCWGG 2 cut(s) 248, 523
PspN4I GGNNCC 3 cut(s) 20, 239, 559
PspPI GGNCC 4 cut(s) 557, 663, 751, 1067
PstNI CAGNNNCTG 1 cut(s) 478
PsuI RGATCY 2 cut(s) 895, 1366
PvuII CAGCTG 2 cut(s) 475, 1637
RsaI GTAC 5 cut(s) 309, 496, 859, 1256, 1323
RsaNI GTAC 5 cut(s) 308, 495, 858, 1255, 1322
RseI CAYNNNNRTG 2 cut(s) 601, 607
SaqAI TTAA 5 cut(s) 624, 767, 1001, 1509, 1739
SatI GCNGC 4 cut(s) 10, 255, 476, 1017
Sau3AI GATC 7 cut(s) 169, 265, 298, 401, 895, 1366, 1639
Sau96I GGNCC 4 cut(s) 557, 663, 751, 1067
ScaI AGTACT 2 cut(s) 859, 1323
SchI GAGTC 1 cut(s) 803
ScrFI CCNGG 3 cut(s) 195, 250, 525
SfaNI GCATC 2 cut(s) 1153, 1574
SfcI CTRYAG 1 cut(s) 456
SfoI GGCGCC 1 cut(s) 239
SinI GGWCC 3 cut(s) 557, 663, 751
SmiMI CAYNNNNRTG 2 cut(s) 601, 607
SmlI CTYRAG 2 cut(s) 303, 1314
SmoI CTYRAG 2 cut(s) 303, 1314
Sse9I AATT 8 cut(s) 487, 517, 887, 956, 1280, 1526, 1557, 1735
SsiI CCGC 2 cut(s) 555, 746
SspDI GGCGCC 1 cut(s) 237
SspMI CTAG 5 cut(s) 42, 110, 492, 899, 1673
StyD4I CCNGG 3 cut(s) 193, 248, 523
TaaI ACNGT 3 cut(s) 536, 760, 815
TaiI ACGT 2 cut(s) 129, 741
TaqI TCGA 4 cut(s) 168, 1267, 1642, 1680
TasI AATT 8 cut(s) 487, 517, 887, 956, 1280, 1526, 1557, 1735
TatI WGTACW 4 cut(s) 494, 857, 1254, 1321
TfiI GAWTC 7 cut(s) 91, 441, 584, 907, 1405, 1588, 1663
Tru1I TTAA 5 cut(s) 624, 767, 1001, 1509, 1739
Tru9I TTAA 5 cut(s) 624, 767, 1001, 1509, 1739
TseFI GTSAC 2 cut(s) 148, 1771
TseI GCWGC 4 cut(s) 9, 254, 475, 1016
Tsp45I GTSAC 2 cut(s) 148, 1771
VpaK11BI GGWCC 3 cut(s) 557, 663, 751
XapI RAATTY 3 cut(s) 487, 1280, 1735
XceI RCATGY 3 cut(s) 699, 1261, 1584
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 5 cut(s) 42, 110, 492, 899, 1673
ZrmI AGTACT 2 cut(s) 859, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.