RchiOBHm_Chr7g0225151

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000114
Physical Location & Seq
Reverse (-)
47657411 .. 47659788
2378 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20164

Sequence Viewer

Length: 1860 bp
ATGGCTGAAGTGATGAAATTGATTAGGCTTTTGTTGGTGTTTCTCTCACTACTTTCTCTCTCTACTGCTCAATCTCCAAAAATAATTAGCAACATAACAACATGCCCCATTGATCTCAGCTATGTCCTTAGAGCCCCCGTCAACTTCTCATCATGCAAAAACTTCCAACCCCTGGCTAAAACCCCCCAAATGGACATCACACTGATCCCATGTTGTCAAACCTTATGGTATCTCTTTGGAATAGGCCTTGCTCAACACCTCAAGGCCACCACTTTTTTCCTACTCCCCAACATAGCAACCTCAAATTCTTGCCTCCAAAACTACCAGTCCAAGCTTACCTCTCTAGCAATCCCTTCCAATCTTCTCTCTTATTGTTTTGACCCTTTACAGTTTGTAACTGGACCCAATTTCTGTGCCCAAATTGAATCTTCCCAAGATATGATCTCCAAGCTTAATCAGACCACTACAATTGACTCTGGATGCAAGCCAGACCTCGCAGATCTCTCACCCTGTGATGTTTGCGCAACAACTATGTTGCAAATTCATCAACAATTAATCACAGTTGATGGTAACATCTCTCATTCTAGAAATTGTTTGTACTTTACAATGCTGTATGTTGGTACGATCAACGACCAGGGTCTTGAAAGTGAGGGTGTCGTGTCTTGTATTTTCGCTTTACCTTTATTGAATGGTTTGCACAAAAAGAGATATACCACTCTTGTAACTGCAGTGGTCTCAGCAACAGGAGGATTGCTTACGATATTATTTTTATACTTTTTATGGAAGAAATCTTTGGGAAAGAAAAGGGCATATAGTGAGAATCTTAGGAATGTTAGTGCTGGAGTTGGGAAGAATGATACAGAACTACCGATCTTAAATTTAAGGAGTATATTAGCTGCTACAAACAACTTTTCTGAAGCTAATAAACTAGGAGAGGGAGGGTTTGGCCCTGTTTATAAGGGCATCTTAAATGAAAATCAAGAGATAGCCATAAAAAGACTGTCAAAGAAGTCAGGGCAAGGATGTCAAGAGTTCATGAATGAATTAAAACTTATAGCAAAGCTCCAACATAGCAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAGAGGAAGAAATGATATTAATCTACGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCAAGGGAAAACATAAAATTGGATTGGGGTAAATGCTTTCGAATTATAGAAGGTACAGCTCAAGGTGTACTTTATATCCACAAATACTCCAGATTGAAAATCATTCACAGGGATCTAAAAGCAAGTAATGTTCTGTTGGATGAAGAAATGAACCCTAAAATTTCAGATTTTGGAATGGCAAAGATTTTCGAGATAAATCAGATTGAAGCAAATACCAACAGGGTTGTTGGGACATATGGTTATATGTCACCTGAGTATGCTCGCTATGGTCATTTTTCTGAGAAATTGGATGTATTTAGTTTTGGAGTGTTGTTGCTAGAGATTGTAAGTGGAAGGAGAAATTCTTCTTTCTATTGTCTTGAACACCCGGTTACTCTTCCTGGATGGGCATGGAAATTATGGAAAGAAGGTAGAGGAATGGAGGTGATTGATGAATCAGTGAGAGAAACATGTCTGCCTCATGAAGCTTTAAGGTGTATCCATGTAGCACTATTGTGTGTTCAAGAAGATCCAGTTGATCGACCAACAATGTCTTCTGTAAATCACATGTTGGCTAATGAAGCTACATCACTTCCACCATTCAAAGAACCTGCATTTTCAACACATGGAAATTATAAAGCTGTTTGCTCTTCTTCTCAATCATCTAGCATTAATCTGGTAACCATTAGCATCCCTGAAGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

619

Amino Acids

69.15

Weight (kDa)

7.45

Isoelectric Point (pI)

47.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 33 - 198 6.3e-33 SPARK
Pkinase PF00069 305 - 507 1.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 307 - 574 2.2e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 957, 1788
Acc16I TGCGCA 1 cut(s) 523
Acc36I ACCTGC 1 cut(s) 1771
AccB7I CCANNNNNTGG 1 cut(s) 172
AclWI GGATC 4 cut(s) 199, 1166, 1293, 1676
AcsI RAATTY 6 cut(s) 304, 540, 877, 1160, 1332, 1513
AcuI CTGAAG 2 cut(s) 27, 936
AdeI CACNNNGTG 1 cut(s) 512
AfaI GTAC 5 cut(s) 599, 622, 1136, 1228, 1242
AfiI CCNNNNNNNGG 2 cut(s) 172, 190
AflIII ACRYGT 2 cut(s) 1622, 1719
AjnI CCWGG 3 cut(s) 171, 633, 1552
AjuI GAANNNNNNNTTGG 4 cut(s) 776, 808, 1690, 1722
AleI CACNNNNGTG 1 cut(s) 1666
Alw26I GTCTC 1 cut(s) 739
AlwI GGATC 4 cut(s) 199, 1166, 1293, 1676
AoxI GGCC 3 cut(s) 244, 264, 946
ApeKI GCWGC 1 cut(s) 896
ApoI RAATTY 6 cut(s) 304, 540, 877, 1160, 1332, 1513
AseI ATTAAT 3 cut(s) 554, 1124, 1824
Asp700I GAANNNNTTC 1 cut(s) 1516
AspLEI GCGC 1 cut(s) 524
AspS9I GGNCC 2 cut(s) 401, 947
AsuC2I CCSGG 1 cut(s) 1541
AsuHPI GGTGA 3 cut(s) 498, 1413, 1609
AsuII TTCGAA 1 cut(s) 1213
AvaII GGWCC 1 cut(s) 401
BaeGI GKGCMC 1 cut(s) 418
BanII GRGCYC 1 cut(s) 136
BbsI GAAGAC 1 cut(s) 1698
BbvI GCAGC 1 cut(s) 883
BccI CCATC 2 cut(s) 560, 1551
BciT130I CCWGG 3 cut(s) 173, 635, 1554
BciVI GTATCC 1 cut(s) 1661
BcnI CCSGG 1 cut(s) 1541
BcoDI GTCTC 1 cut(s) 739
BfaI CTAG 5 cut(s) 344, 585, 929, 1490, 1818
BfmI CTRYAG 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 1771
BfuI GTATCC 1 cut(s) 1661
BglII AGATCT 1 cut(s) 499
BisI GCNGC 1 cut(s) 897
BlsI GCNGC 1 cut(s) 898
Bme1390I CCNGG 4 cut(s) 173, 635, 1541, 1554
Bme18I GGWCC 1 cut(s) 401
BmgT120I GGNCC 2 cut(s) 401, 947
BmiI GGNNCC 1 cut(s) 403
BmrFI CCNGG 4 cut(s) 173, 635, 1541, 1554
BmsI GCATC 3 cut(s) 470, 972, 1851
BoxI GACNNNNGTC 1 cut(s) 636
BpiI GAAGAC 1 cut(s) 1698
BpmI CTGGAG 2 cut(s) 861, 1246
Bpu14I TTCGAA 1 cut(s) 1213
BpuEI CTTGAG 2 cut(s) 245, 1218
BpuMI CCSGG 1 cut(s) 1541
BsaBI GATNNNNATC 1 cut(s) 1124
BsaI GGTCTC 1 cut(s) 739
BsaJI CCNNGG 3 cut(s) 171, 634, 1175
BsaXI ACNNNNNCTCC 2 cut(s) 1244, 1274
Bsc4I CCNNNNNNNGG 2 cut(s) 172, 190
Bse1I ACTGG 3 cut(s) 325, 403, 1685
Bse8I GATNNNNATC 1 cut(s) 1124
BseBI CCWGG 3 cut(s) 173, 635, 1554
BseDI CCNNGG 3 cut(s) 171, 634, 1175
BseGI GGATG 6 cut(s) 485, 1028, 1318, 1468, 1562, 1842
BseJI GATNNNNATC 1 cut(s) 1124
BseLI CCNNNNNNNGG 2 cut(s) 172, 190
BseMII CTCAG 4 cut(s) 130, 750, 1416, 1443
BseNI ACTGG 3 cut(s) 325, 403, 1685
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 1 cut(s) 883
BshFI GGCC 3 cut(s) 246, 266, 948
BsiSI CCGG 1 cut(s) 1541
BslFI GGGAC 1 cut(s) 1417
BslI CCNNNNNNNGG 2 cut(s) 172, 190
BsmAI GTCTC 1 cut(s) 739
BsmFI GGGAC 1 cut(s) 1417
BsnI GGCC 3 cut(s) 246, 266, 948
Bso31I GGTCTC 1 cut(s) 739
Bsp119I TTCGAA 1 cut(s) 1213
Bsp1286I GDGCHC 2 cut(s) 136, 418
BspANI GGCC 3 cut(s) 246, 266, 948
BspCNI CTCAG 4 cut(s) 129, 749, 1417, 1444
BspHI TCATGA 2 cut(s) 1035, 1633
BspLI GGNNCC 1 cut(s) 403
BspMAI CTGCAG 1 cut(s) 730
BspMI ACCTGC 1 cut(s) 1771
BspPI GGATC 4 cut(s) 199, 1166, 1293, 1676
BspQI GCTCTTC 1 cut(s) 1807
BspT104I TTCGAA 1 cut(s) 1213
BspTNI GGTCTC 1 cut(s) 739
BsrI ACTGG 3 cut(s) 325, 403, 1685
BssECI CCNNGG 3 cut(s) 171, 634, 1175
BssT1I CCWWGG 1 cut(s) 1175
Bst2UI CCWGG 3 cut(s) 173, 635, 1554
Bst4CI ACNGT 3 cut(s) 390, 562, 1002
Bst6I CTCTTC 3 cut(s) 1101, 1554, 1807
BstBI TTCGAA 1 cut(s) 1213
BstC8I GCNNGC 2 cut(s) 485, 1435
BstDEI CTNAG 6 cut(s) 116, 128, 736, 824, 1425, 1452
BstEII GGTNACC 1 cut(s) 1831
BstF5I GGATG 6 cut(s) 485, 1028, 1318, 1468, 1562, 1842
BstHHI GCGC 1 cut(s) 524
BstMAI GTCTC 1 cut(s) 739
BstMWI GCNNNNNNNGC 1 cut(s) 1733
BstNI CCWGG 3 cut(s) 173, 635, 1554
BstNSI RCATGY 4 cut(s) 105, 1141, 1626, 1723
BstPAI GACNNNNGTC 1 cut(s) 636
BstPI GGTNACC 1 cut(s) 1831
BstSCI CCNGG 4 cut(s) 171, 633, 1539, 1552
BstSFI CTRYAG 1 cut(s) 726
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 1 cut(s) 883
BstV2I GAAGAC 1 cut(s) 1698
BstX2I RGATCY 3 cut(s) 499, 1285, 1681
BstYI RGATCY 3 cut(s) 499, 1285, 1681
BsuI GTATCC 1 cut(s) 1661
BsuRI GGCC 3 cut(s) 246, 266, 948
BtsCI GGATG 6 cut(s) 485, 1028, 1318, 1468, 1562, 1842
BtsI GCAGTG 1 cut(s) 735
BtsIMutI CAGTG 3 cut(s) 200, 735, 1617
BveI ACCTGC 1 cut(s) 1771
Cac8I GCNNGC 2 cut(s) 485, 1435
CciI TCATGA 2 cut(s) 1035, 1633
CfoI GCGC 1 cut(s) 524
Cfr13I GGNCC 2 cut(s) 401, 947
Csp6I GTAC 5 cut(s) 598, 621, 1135, 1227, 1241
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviQI GTAC 5 cut(s) 598, 621, 1135, 1227, 1241
DdeI CTNAG 6 cut(s) 116, 128, 736, 824, 1425, 1452
DraIII CACNNNGTG 1 cut(s) 512
Eam1104I CTCTTC 3 cut(s) 1101, 1554, 1807
EarI CTCTTC 3 cut(s) 1101, 1554, 1807
Eco130I CCWWGG 1 cut(s) 1175
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 1 cut(s) 136
Eco31I GGTCTC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 401
Eco57I CTGAAG 2 cut(s) 27, 936
Eco91I GGTNACC 1 cut(s) 1831
EcoO65I GGTNACC 1 cut(s) 1831
EcoRII CCWGG 3 cut(s) 171, 633, 1552
EcoT14I CCWWGG 1 cut(s) 1175
EcoT38I GRGCYC 1 cut(s) 136
ErhI CCWWGG 1 cut(s) 1175
FalI AAGNNNNNCTT 4 cut(s) 950, 982, 1227, 1259
FaqI GGGAC 1 cut(s) 1417
FauNDI CATATG 1 cut(s) 1408
Fnu4HI GCNGC 1 cut(s) 897
FokI GGATG 6 cut(s) 492, 1035, 1325, 1475, 1569, 1829
FriOI GRGCYC 1 cut(s) 136
Fsp4HI GCNGC 1 cut(s) 897
FspBI CTAG 5 cut(s) 344, 585, 929, 1490, 1818
FspI TGCGCA 1 cut(s) 523
GlaI GCGC 1 cut(s) 523
GluI GCNGC 1 cut(s) 897
GsuI CTGGAG 2 cut(s) 861, 1246
HaeIII GGCC 3 cut(s) 246, 266, 948
HapII CCGG 1 cut(s) 1541
HhaI GCGC 1 cut(s) 524
Hin6I GCGC 1 cut(s) 522
HinP1I GCGC 1 cut(s) 522
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 3 cut(s) 332, 449, 1638
HinfI GANTC 4 cut(s) 425, 473, 820, 1607
HpaII CCGG 1 cut(s) 1541
HphI GGTGA 3 cut(s) 498, 1413, 1609
Hpy166II GTNNAC 2 cut(s) 142, 1241
Hpy188I TCNGA 5 cut(s) 459, 916, 1339, 1374, 1453
Hpy8I GTNNAC 2 cut(s) 142, 1241
HpyAV CCTTC 5 cut(s) 363, 1217, 1500, 1574, 1844
HpyCH4III ACNGT 3 cut(s) 390, 562, 1002
HpyCH4V TGCA 6 cut(s) 156, 483, 538, 697, 728, 1766
HpyF10VI GCNNNNNNNGC 1 cut(s) 1733
HpyF3I CTNAG 6 cut(s) 116, 128, 736, 824, 1425, 1452
HspAI GCGC 1 cut(s) 522
LguI GCTCTTC 1 cut(s) 1807
LmnI GCTCC 1 cut(s) 1068
Lsp1109I GCAGC 1 cut(s) 883
LweI GCATC 3 cut(s) 470, 972, 1851
MaeI CTAG 5 cut(s) 344, 585, 929, 1490, 1818
MaeIII GTNAC 6 cut(s) 394, 569, 721, 1419, 1543, 1831
MfeI CAATTG 1 cut(s) 468
MflI RGATCY 3 cut(s) 499, 1285, 1681
MhlI GDGCHC 2 cut(s) 136, 418
MlyI GAGTC 1 cut(s) 467
MmeI TCCRAC 3 cut(s) 190, 1090, 1290
MroXI GAANNNNTTC 1 cut(s) 1516
MseI TTAA 9 cut(s) 453, 554, 875, 881, 968, 1046, 1124, 1643, 1824
MslI CAYNNNNRTG 1 cut(s) 1666
MspI CCGG 1 cut(s) 1541
MspR9I CCNGG 4 cut(s) 173, 635, 1541, 1554
MunI CAATTG 1 cut(s) 468
MvaI CCWGG 3 cut(s) 173, 635, 1554
MwoI GCNNNNNNNGC 1 cut(s) 1733
NciI CCSGG 1 cut(s) 1541
NdeI CATATG 1 cut(s) 1408
NlaIV GGNNCC 1 cut(s) 403
NmuCI GTSAC 1 cut(s) 1419
NsbI TGCGCA 1 cut(s) 523
NspI RCATGY 4 cut(s) 105, 1141, 1626, 1723
NspV TTCGAA 1 cut(s) 1213
OliI CACNNNNGTG 1 cut(s) 1666
PagI TCATGA 2 cut(s) 1035, 1633
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 2 cut(s) 1622, 1719
PciSI GCTCTTC 1 cut(s) 1807
PdmI GAANNNNTTC 1 cut(s) 1516
PfeI GAWTC 3 cut(s) 425, 820, 1607
PflMI CCANNNNNTGG 1 cut(s) 172
PfoI TCCNGGA 1 cut(s) 1552
PkrI GCNGC 1 cut(s) 898
PleI GAGTC 1 cut(s) 467
PpsI GAGTC 1 cut(s) 467
PscI ACATGT 2 cut(s) 1622, 1719
PshAI GACNNNNGTC 1 cut(s) 636
PshBI ATTAAT 3 cut(s) 554, 1124, 1824
PsiI TTATAA 2 cut(s) 957, 1788
Psp6I CCWGG 3 cut(s) 171, 633, 1552
PspEI GGTNACC 1 cut(s) 1831
PspGI CCWGG 3 cut(s) 171, 633, 1552
PspN4I GGNNCC 1 cut(s) 403
PspPI GGNCC 2 cut(s) 401, 947
PstI CTGCAG 1 cut(s) 730
PsuI RGATCY 3 cut(s) 499, 1285, 1681
RsaI GTAC 5 cut(s) 599, 622, 1136, 1228, 1242
RsaNI GTAC 5 cut(s) 598, 621, 1135, 1227, 1241
RseI CAYNNNNRTG 1 cut(s) 1666
SapI GCTCTTC 1 cut(s) 1807
SaqAI TTAA 9 cut(s) 453, 554, 875, 881, 968, 1046, 1124, 1643, 1824
SatI GCNGC 1 cut(s) 897
Sau96I GGNCC 2 cut(s) 401, 947
SchI GAGTC 1 cut(s) 467
ScrFI CCNGG 4 cut(s) 173, 635, 1541, 1554
SduI GDGCHC 2 cut(s) 136, 418
SfaNI GCATC 3 cut(s) 470, 972, 1851
SfcI CTRYAG 1 cut(s) 726
SfuI TTCGAA 1 cut(s) 1213
SinI GGWCC 1 cut(s) 401
SmiMI CAYNNNNRTG 1 cut(s) 1666
SmlI CTYRAG 2 cut(s) 260, 1233
SmoI CTYRAG 2 cut(s) 260, 1233
SseBI AGGCCT 1 cut(s) 246
SspMI CTAG 5 cut(s) 344, 585, 929, 1490, 1818
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 4 cut(s) 171, 633, 1539, 1552
StyI CCWWGG 1 cut(s) 1175
TaaI ACNGT 3 cut(s) 390, 562, 1002
TaqI TCGA 5 cut(s) 1147, 1213, 1362, 1693, 1855
TatI WGTACW 3 cut(s) 597, 1134, 1240
TfiI GAWTC 3 cut(s) 425, 820, 1607
Tru1I TTAA 9 cut(s) 453, 554, 875, 881, 968, 1046, 1124, 1643, 1824
Tru9I TTAA 9 cut(s) 453, 554, 875, 881, 968, 1046, 1124, 1643, 1824
TscAI CASTG 3 cut(s) 207, 735, 1617
TseFI GTSAC 1 cut(s) 1419
TseI GCWGC 1 cut(s) 896
Tsp45I GTSAC 1 cut(s) 1419
TspRI CASTG 3 cut(s) 207, 735, 1617
Van91I CCANNNNNTGG 1 cut(s) 172
VpaK11BI GGWCC 1 cut(s) 401
VspI ATTAAT 3 cut(s) 554, 1124, 1824
XapI RAATTY 6 cut(s) 304, 540, 877, 1160, 1332, 1513
XbaI TCTAGA 1 cut(s) 584
XceI RCATGY 4 cut(s) 105, 1141, 1626, 1723
XmnI GAANNNNTTC 1 cut(s) 1516
XspI CTAG 5 cut(s) 344, 585, 929, 1490, 1818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.