pycom09g02450

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1839011 .. 1841374
2364 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g02450.1

Sequence Viewer

Length: 1803 bp
ATGGGGTGGCTTCTTCTTTGTGCTTTTATGTTTCTCCTATCTGTTTGTACAAGCCTTGACAATTTAGTACCGGGAGAATCTATCAGCACAGACCAGACCTTGATTTCTTCCAGTGGAACATTTGCATTAGGCTTCTTCAGTCCCGGAAATTCGAAGAAATTCTTCCTTGGTATACGGTACAACACAATCCCAAAGACCCCGAAAGTATGGGTTGCCAACAGAGAATTCCCACTTGATTCTCCGGGTGTATTAACGCTTAGCAGTGATGGAAATCTTGTGGTGTTAGATGGGATGACTAAAAAACTAGTTATCTGGTCTTCTAATGCATCTGTACCAGCTTCTGCAATCAATGCCACAACTGCTGTGCTGATGGATAGTGGAAACCTTCAACTAAAACTTGGAGAAGACATTTTGTGGCAGAGCTTCGATCATCCCTCTGACACATTGTTACCTAGCGTGAAGCTTAGCCTGAGCAAGATAACAGGTCAACAAGCGCGTCTGACATCGTGGGCAGCACTTGATGATCCACAACCCGGAATGTTCAGCTTAGGCATTGATCCGAAAGTTCAGAGGCAGCTAATAACCTGGAAGGCAAATGCTACGTATTGGAGAAGTGCTGTATACTTCGACAAGGAGTCAAAAACATTCTTTCGAAATCAAAGCGGAGGCTTCTTTTACGTTGCGTACAGTTTTGATGCTAATGAGATTTATTTTACTTTTGGTGTGTCGGATAGTTCAGTAAAGCTGAGGGCTGTTTTGAGTCCAACTGGGCAGTTCCACCTACTGTTGTGGACGGAGAGAAGTAAGACATGGTTTGAAGCATGGGGAGAGCCTATCAATAAATGTGACTATTATGCTAGATGTGGTCCATATGGTGCCTGTGATAAAAATGGTGATCCCCTTGCCTCACAATGCAAGTGTTTGAAAGGTTTTAGGACCGAATTTCAGAAACAATGGGCTACAGGTGAATGGCCCGGTAGTTGTGTTCGGGAAAAGGCATTGACATGTGATAAAGGGGAAGGGTTTTCAAAGTTTGAGAAGATGAAACTACCGGATCATGCTATTATTTTAGGAAATATGAGTATGAGTGAGTGTGCATATGAATGCCTTCGGAACTGCTCTTGCACAGCTTATGCCTATTCAAATGTGACAGAAGGAGGTACTGTAAAATGCTTGACATGGCTTGGTGACTTGACGGATCTTGTAGAGAATCATGGGCTTGGGCAAAACATGTATATTCGTGTTCACCGCTCTGATCAAGGTGGTAAGGGTCATGTTCATAAGCTGCCCCTTGTAATAACACTAGTCTCAGCAACAGCAGGATTGCTTACAATTTTTTTATTTGGCTATTTATTGCGGAAGAAAACTTTGAGAAATGAAGGGAGTGCAGGAGGAAGTATGAGTGAGGCTATAAGCAATGTTAGCCTTGGAGGTGGAAAGAATGATAACGAACTACCACTCTTCAGTTTAAGGAGTATAGTCGCATCAACAAACAACTTTTCTGAAGCTAATAAACTCGGAGAGGGAGGGTTTGGCCCTGTTTATAAGGGGATTTTGACTGAAAATGAAGAAGTAGCGATAAAAAGGCTGTCAAGGAAGTCAGGGCAAGGACATCAGGAGTTCATGAATGAGTTAAAGCTTATAGCCAAGCTCCAACATACCAATCTCGTTAGGCTCTTGGGTTGCTGCATTGAAGAGGAGGAAATGATATTGATCTACGAGTTCATGCCCAATAGAAGTTTGGACAAATTTTTGTTTGATTCATCCAAAAATACAACACTGGATTGGGGTACACGCTTTTGA

Protein Analysis

601

Amino Acids

66.44

Weight (kDa)

7.8

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 69 - 170 2.9e-28 D-mannose binding lectin
S_locus_glycop PF00954 229 - 314 3.8e-20 S-locus glycoprotein domain
PAN_2 PF08276 336 - 401 1.6e-17 PAN-like domain
Pkinase PF00069 501 - 586 1.9e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 503 - 596 2.8e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1545
AccB1I GGYRCC 1 cut(s) 875
AccBSI CCGCTC 1 cut(s) 1251
AccI GTMKAC 2 cut(s) 172, 621
AccII CGCG 1 cut(s) 496
AciI CCGC 3 cut(s) 663, 1249, 1357
AclWI GGATC 5 cut(s) 518, 551, 890, 1062, 1206
AcsI RAATTY 5 cut(s) 148, 158, 224, 941, 1748
AcuI CTGAAG 3 cut(s) 121, 1447, 1524
AfaI GTAC 7 cut(s) 49, 69, 179, 333, 686, 1162, 1792
AfiI CCNNNNNNNGG 1 cut(s) 533
AflIII ACRYGT 2 cut(s) 1004, 1230
AgsI TTSAA 6 cut(s) 389, 818, 925, 1029, 1143, 1694
AhdI GACNNNNNGTC 1 cut(s) 634
AhlI ACTAGT 2 cut(s) 304, 1303
AjnI CCWGG 1 cut(s) 584
AjuI GAANNNNNNNTTGG 2 cut(s) 209, 241
Alw26I GTCTC 1 cut(s) 1312
AlwI GGATC 5 cut(s) 518, 551, 890, 1062, 1206
AlwNI CAGNNNCTG 1 cut(s) 341
AoxI GGCC 2 cut(s) 971, 1534
ApeKI GCWGC 4 cut(s) 512, 574, 1285, 1686
ApoI RAATTY 5 cut(s) 148, 158, 224, 941, 1748
Asp700I GAANNNNTTC 3 cut(s) 158, 161, 1107
AspLEI GCGC 1 cut(s) 496
AspS9I GGNCC 4 cut(s) 866, 936, 972, 1535
AsuC2I CCSGG 5 cut(s) 72, 144, 243, 534, 975
AsuHPI GGTGA 4 cut(s) 905, 977, 1199, 1238
AsuII TTCGAA 2 cut(s) 152, 652
AvaII GGWCC 2 cut(s) 866, 936
BanI GGYRCC 1 cut(s) 875
BbsI GAAGAC 2 cut(s) 309, 411
BbvCI CCTCAGC 1 cut(s) 746
BbvI GCAGC 4 cut(s) 524, 586, 1272, 1673
BccI CCATC 3 cut(s) 260, 281, 364
BciT130I CCWGG 1 cut(s) 586
BclI TGATCA 1 cut(s) 1255
BcnI CCSGG 5 cut(s) 72, 144, 243, 534, 975
BcoDI GTCTC 1 cut(s) 1312
BcuI ACTAGT 2 cut(s) 304, 1303
BfaI CTAG 4 cut(s) 305, 453, 858, 1304
BfmI CTRYAG 1 cut(s) 960
BisI GCNGC 4 cut(s) 513, 575, 1286, 1687
BlpI GCTNAGC 2 cut(s) 257, 464
BlsI GCNGC 4 cut(s) 514, 576, 1287, 1688
Bme1390I CCNGG 6 cut(s) 72, 144, 243, 534, 586, 975
Bme18I GGWCC 2 cut(s) 866, 936
BmeRI GACNNNNNGTC 1 cut(s) 634
BmgT120I GGNCC 4 cut(s) 866, 936, 972, 1535
BmiI GGNNCC 1 cut(s) 877
BmrFI CCNGG 6 cut(s) 72, 144, 243, 534, 586, 975
BmrI ACTGGG 1 cut(s) 777
BmsI GCATC 3 cut(s) 335, 685, 1493
BmuI ACTGGG 1 cut(s) 777
BpiI GAAGAC 2 cut(s) 309, 411
Bpu10I CCTNAGC 3 cut(s) 470, 547, 746
Bpu1102I GCTNAGC 2 cut(s) 257, 464
Bpu14I TTCGAA 2 cut(s) 152, 652
BpuMI CCSGG 5 cut(s) 72, 144, 243, 534, 975
BsaAI YACGTR 1 cut(s) 603
BsaBI GATNNNNATC 2 cut(s) 270, 1712
BsaJI CCNNGG 2 cut(s) 166, 1426
BsaWI WCCGGW 1 cut(s) 1051
BsaXI ACNNNNNCTCC 2 cut(s) 1149, 1179
Bsc4I CCNNNNNNNGG 1 cut(s) 533
Bse1I ACTGG 3 cut(s) 111, 772, 1785
Bse3DI GCAATG 1 cut(s) 1423
Bse8I GATNNNNATC 2 cut(s) 270, 1712
BseBI CCWGG 1 cut(s) 586
BseDI CCNNGG 2 cut(s) 166, 1426
BseGI GGATG 3 cut(s) 297, 430, 1763
BseJI GATNNNNATC 2 cut(s) 270, 1712
BseLI CCNNNNNNNGG 1 cut(s) 533
BseMI GCAATG 1 cut(s) 1423
BseMII CTCAG 3 cut(s) 461, 737, 1323
BseNI ACTGG 3 cut(s) 111, 772, 1785
BseRI GAGGAG 1 cut(s) 1712
BseXI GCAGC 4 cut(s) 524, 586, 1272, 1673
BsgI GTGCAG 1 cut(s) 1407
Bsh1236I CGCG 1 cut(s) 496
BshFI GGCC 2 cut(s) 973, 1536
BshNI GGYRCC 1 cut(s) 875
BsiSI CCGG 6 cut(s) 71, 144, 242, 534, 975, 1052
BslFI GGGAC 1 cut(s) 126
BslI CCNNNNNNNGG 1 cut(s) 533
BsmAI GTCTC 1 cut(s) 1312
BsmFI GGGAC 1 cut(s) 126
BsmI GAATGC 1 cut(s) 1109
BsnI GGCC 2 cut(s) 973, 1536
Bsp119I TTCGAA 2 cut(s) 152, 652
Bsp1407I TGTACA 1 cut(s) 47
Bsp143I GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
Bsp1720I GCTNAGC 2 cut(s) 257, 464
BspACI CCGC 3 cut(s) 663, 1249, 1357
BspANI GGCC 2 cut(s) 973, 1536
BspCNI CTCAG 3 cut(s) 462, 738, 1322
BspFNI CGCG 1 cut(s) 496
BspHI TCATGA 1 cut(s) 1623
BspLI GGNNCC 1 cut(s) 877
BspPI GGATC 5 cut(s) 518, 551, 890, 1062, 1206
BspT104I TTCGAA 2 cut(s) 152, 652
BspT107I GGYRCC 1 cut(s) 875
BsrBI CCGCTC 1 cut(s) 1251
BsrDI GCAATG 1 cut(s) 1423
BsrGI TGTACA 1 cut(s) 47
BsrI ACTGG 3 cut(s) 111, 772, 1785
BssECI CCNNGG 2 cut(s) 166, 1426
BssMI GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
BssNAI GTATAC 2 cut(s) 173, 622
BssT1I CCWWGG 2 cut(s) 166, 1426
Bst1107I GTATAC 2 cut(s) 173, 622
Bst2UI CCWGG 1 cut(s) 586
Bst4CI ACNGT 4 cut(s) 177, 689, 786, 1165
Bst6I CTCTTC 2 cut(s) 1466, 1689
BstAPI GCANNNNNTGC 1 cut(s) 350
BstAUI TGTACA 1 cut(s) 47
BstBAI YACGTR 1 cut(s) 603
BstBI TTCGAA 2 cut(s) 152, 652
BstDEI CTNAG 6 cut(s) 257, 464, 470, 547, 746, 1309
BstF5I GGATG 3 cut(s) 297, 430, 1763
BstFNI CGCG 1 cut(s) 496
BstHHI GCGC 1 cut(s) 496
BstKTI GATC 8 cut(s) 430, 526, 559, 898, 1057, 1201, 1258, 1716
BstMAI GTCTC 1 cut(s) 1312
BstMBI GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
BstMWI GCNNNNNNNGC 3 cut(s) 350, 359, 1422
BstNI CCWGG 1 cut(s) 586
BstNSI RCATGY 2 cut(s) 1008, 1234
BstSCI CCNGG 6 cut(s) 70, 142, 241, 532, 584, 973
BstSFI CTRYAG 1 cut(s) 960
BstSNI TACGTA 1 cut(s) 603
BstUI CGCG 1 cut(s) 496
BstV1I GCAGC 4 cut(s) 524, 586, 1272, 1673
BstV2I GAAGAC 2 cut(s) 309, 411
BstX2I RGATCY 1 cut(s) 1198
BstYI RGATCY 1 cut(s) 1198
BstZ17I GTATAC 2 cut(s) 173, 622
BsuRI GGCC 2 cut(s) 973, 1536
BtsCI GGATG 3 cut(s) 297, 430, 1763
BtsI GCAGTG 1 cut(s) 268
BtsIMutI CAGTG 3 cut(s) 118, 268, 1778
CaiI CAGNNNCTG 1 cut(s) 341
CciI TCATGA 1 cut(s) 1623
CfoI GCGC 1 cut(s) 496
Cfr13I GGNCC 4 cut(s) 866, 936, 972, 1535
CseI GACGC 1 cut(s) 485
Csp6I GTAC 7 cut(s) 48, 68, 178, 332, 685, 1161, 1791
CviQI GTAC 7 cut(s) 48, 68, 178, 332, 685, 1161, 1791
DdeI CTNAG 6 cut(s) 257, 464, 470, 547, 746, 1309
DpnI GATC 8 cut(s) 429, 525, 558, 897, 1056, 1200, 1257, 1715
DpnII GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
DriI GACNNNNNGTC 1 cut(s) 634
Eam1104I CTCTTC 2 cut(s) 1466, 1689
Eam1105I GACNNNNNGTC 1 cut(s) 634
EarI CTCTTC 2 cut(s) 1466, 1689
Eco105I TACGTA 1 cut(s) 603
Eco130I CCWWGG 2 cut(s) 166, 1426
Eco47I GGWCC 2 cut(s) 866, 936
Eco57I CTGAAG 3 cut(s) 121, 1447, 1524
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 1 cut(s) 584
EcoT14I CCWWGG 2 cut(s) 166, 1426
EcoT22I ATGCAT 1 cut(s) 328
ErhI CCWWGG 2 cut(s) 166, 1426
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 1 cut(s) 126
FauNDI CATATG 2 cut(s) 871, 1099
FbaI TGATCA 1 cut(s) 1255
FblI GTMKAC 2 cut(s) 172, 621
Fnu4HI GCNGC 4 cut(s) 513, 575, 1286, 1687
FokI GGATG 3 cut(s) 304, 417, 1750
Fsp4HI GCNGC 4 cut(s) 513, 575, 1286, 1687
FspBI CTAG 4 cut(s) 305, 453, 858, 1304
GlaI GCGC 1 cut(s) 495
GluI GCNGC 4 cut(s) 513, 575, 1286, 1687
HaeIII GGCC 2 cut(s) 973, 1536
HapII CCGG 6 cut(s) 71, 144, 242, 534, 975, 1052
HgaI GACGC 1 cut(s) 485
HhaI GCGC 1 cut(s) 496
Hin6I GCGC 1 cut(s) 494
HinP1I GCGC 1 cut(s) 494
HincII GTYRAC 1 cut(s) 488
HindII GTYRAC 1 cut(s) 488
HindIII AAGCTT 2 cut(s) 461, 1637
HinfI GANTC 6 cut(s) 77, 236, 635, 760, 1210, 1760
HpaII CCGG 6 cut(s) 71, 144, 242, 534, 975, 1052
HphI GGTGA 4 cut(s) 905, 977, 1199, 1238
Hpy166II GTNNAC 6 cut(s) 173, 488, 622, 792, 1246, 1793
Hpy188III TCNNGA 3 cut(s) 989, 1616, 1624
Hpy8I GTNNAC 6 cut(s) 173, 488, 622, 792, 1246, 1793
HpyAV CCTTC 6 cut(s) 395, 583, 1013, 1118, 1148, 1373
HpyCH4III ACNGT 4 cut(s) 177, 689, 786, 1165
HpyCH4IV ACGT 2 cut(s) 602, 678
HpyCH4V TGCA 8 cut(s) 125, 326, 344, 915, 1097, 1125, 1388, 1689
HpyF10VI GCNNNNNNNGC 3 cut(s) 350, 359, 1422
HpyF3I CTNAG 6 cut(s) 257, 464, 470, 547, 746, 1309
HpySE526I ACGT 2 cut(s) 602, 678
HspAI GCGC 1 cut(s) 494
Ksp22I TGATCA 1 cut(s) 1255
Kzo9I GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
LmnI GCTCC 1 cut(s) 1656
Lsp1109I GCAGC 4 cut(s) 524, 586, 1272, 1673
LweI GCATC 3 cut(s) 335, 685, 1493
MaeI CTAG 4 cut(s) 305, 453, 858, 1304
MaeII ACGT 2 cut(s) 602, 678
MaeIII GTNAC 4 cut(s) 447, 845, 1147, 1187
MalI GATC 8 cut(s) 429, 525, 558, 897, 1056, 1200, 1257, 1715
MbiI CCGCTC 1 cut(s) 1251
MboI GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
MflI RGATCY 1 cut(s) 1198
MluCI AATT 7 cut(s) 61, 148, 158, 224, 941, 1332, 1748
MlyI GAGTC 2 cut(s) 644, 769
MmeI TCCRAC 3 cut(s) 708, 788, 1678
Mph1103I ATGCAT 1 cut(s) 328
MroXI GAANNNNTTC 3 cut(s) 158, 161, 1107
MseI TTAA 3 cut(s) 251, 1469, 1634
MslI CAYNNNNRTG 2 cut(s) 1003, 1102
MspI CCGG 6 cut(s) 71, 144, 242, 534, 975, 1052
MspR9I CCNGG 6 cut(s) 72, 144, 243, 534, 586, 975
Mva1269I GAATGC 1 cut(s) 1109
MvaI CCWGG 1 cut(s) 586
MvnI CGCG 1 cut(s) 496
MwoI GCNNNNNNNGC 3 cut(s) 350, 359, 1422
NciI CCSGG 5 cut(s) 72, 144, 243, 534, 975
NdeI CATATG 2 cut(s) 871, 1099
NdeII GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
NlaIV GGNNCC 1 cut(s) 877
NmuCI GTSAC 3 cut(s) 845, 1147, 1187
NsiI ATGCAT 1 cut(s) 328
NspI RCATGY 2 cut(s) 1008, 1234
NspV TTCGAA 2 cut(s) 152, 652
PagI TCATGA 1 cut(s) 1623
PciI ACATGT 2 cut(s) 1004, 1230
PctI GAATGC 1 cut(s) 1109
PdmI GAANNNNTTC 3 cut(s) 158, 161, 1107
PfeI GAWTC 4 cut(s) 77, 236, 1210, 1760
PfoI TCCNGGA 1 cut(s) 142
PkrI GCNGC 4 cut(s) 514, 576, 1287, 1688
PleI GAGTC 2 cut(s) 643, 768
PpsI GAGTC 2 cut(s) 643, 768
Ppu21I YACGTR 1 cut(s) 603
PscI ACATGT 2 cut(s) 1004, 1230
PsiI TTATAA 1 cut(s) 1545
Psp6I CCWGG 1 cut(s) 584
PspGI CCWGG 1 cut(s) 584
PspN4I GGNNCC 1 cut(s) 877
PspPI GGNCC 4 cut(s) 866, 936, 972, 1535
PstNI CAGNNNCTG 1 cut(s) 341
PsuI RGATCY 1 cut(s) 1198
RsaI GTAC 7 cut(s) 49, 69, 179, 333, 686, 1162, 1792
RsaNI GTAC 7 cut(s) 48, 68, 178, 332, 685, 1161, 1791
RseI CAYNNNNRTG 2 cut(s) 1003, 1102
SaqAI TTAA 3 cut(s) 251, 1469, 1634
SatI GCNGC 4 cut(s) 513, 575, 1286, 1687
Sau3AI GATC 8 cut(s) 427, 523, 556, 895, 1054, 1198, 1255, 1713
Sau96I GGNCC 4 cut(s) 866, 936, 972, 1535
SchI GAGTC 2 cut(s) 644, 769
ScrFI CCNGG 6 cut(s) 72, 144, 243, 534, 586, 975
SfaNI GCATC 3 cut(s) 335, 685, 1493
SfcI CTRYAG 1 cut(s) 960
SfuI TTCGAA 2 cut(s) 152, 652
SinI GGWCC 2 cut(s) 866, 936
SmiMI CAYNNNNRTG 2 cut(s) 1003, 1102
SnaBI TACGTA 1 cut(s) 603
SpeI ACTAGT 2 cut(s) 304, 1303
Sse9I AATT 7 cut(s) 61, 148, 158, 224, 941, 1332, 1748
SsiI CCGC 3 cut(s) 663, 1249, 1357
SspMI CTAG 4 cut(s) 305, 453, 858, 1304
StyD4I CCNGG 6 cut(s) 70, 142, 241, 532, 584, 973
StyI CCWWGG 2 cut(s) 166, 1426
TaaI ACNGT 4 cut(s) 177, 689, 786, 1165
TaiI ACGT 2 cut(s) 605, 681
TaqI TCGA 4 cut(s) 152, 426, 627, 652
TaqII GACCGA 1 cut(s) 953
TasI AATT 7 cut(s) 61, 148, 158, 224, 941, 1332, 1748
TatI WGTACW 1 cut(s) 47
TfiI GAWTC 4 cut(s) 77, 236, 1210, 1760
Tru1I TTAA 3 cut(s) 251, 1469, 1634
Tru9I TTAA 3 cut(s) 251, 1469, 1634
TscAI CASTG 3 cut(s) 118, 268, 1785
TseFI GTSAC 3 cut(s) 845, 1147, 1187
TseI GCWGC 4 cut(s) 512, 574, 1285, 1686
Tsp45I GTSAC 3 cut(s) 845, 1147, 1187
TspDTI ATGAA 9 cut(s) 1058, 1116, 1268, 1392, 1581, 1612, 1640, 1714, 1752
TspGWI ACGGA 2 cut(s) 809, 1211
TspRI CASTG 3 cut(s) 118, 268, 1785
VpaK11BI GGWCC 2 cut(s) 866, 936
XapI RAATTY 5 cut(s) 148, 158, 224, 941, 1748
XceI RCATGY 2 cut(s) 1008, 1234
XcmI CCANNNNNNNNNTGG 1 cut(s) 1738
XmiI GTMKAC 2 cut(s) 172, 621
XmnI GAANNNNTTC 3 cut(s) 158, 161, 1107
XspI CTAG 4 cut(s) 305, 453, 858, 1304
Zsp2I ATGCAT 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.