Rroxscaffold_2G00089360

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000114
Physical Location & Seq
Forward (+)
11380954 .. 11391136
10183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00089360.1

Sequence Viewer

Length: 2280 bp
ATGACTGAAACGCAACAAGCCCAGAAGAACATAGAAAAGCACAAGCCAGAGGCCCAAATGGGAGATCAGATACTAACCCAGATAGAACCAGTTAAAAATCACCAGGAAAAAGAGAAGATAAAACCAGTCAAGATGACTAAACAGAAAGATATGGATTCTATATTGCGGTCCAGTCAAATGATCAATCATAATATCATATATATTCTTCCACAGGTGACAAAAGAAAGATTTGAGGCATCGGAAGTCATAGAAGTGATTTTAGAAAGACTTGAGGTGCAAGTCTCAGATACGTTTGCAGACATCAGATTATGGAAATGGGATTTTGGTCATACTAAAGGTGTTTTACCAGTAGCTCCTCTCTACCCAAATTCAGTGATGAAACTGATAATTGGGGTTTCGTTGGTGTATCTCTCACTAATTGCTTTCCCTACCACCCAATCTCTAAATTCAACCAACGTAACAACATGCCCCATGGATCTCAGTTATGTCCTTAGAATCCCCTTCAAATCTTCATCACGCAAAAACTTCCAAGCCCCGCCCAAAACCCCCGAAACCGACATCACCACAATCCCTTGTTGTCAAACCCTCTTATCTCTCATTGCAATAGGCCTTGCCCAACACCTAAAAGACACTTCTCTTTTCCTACTCCCCAACATAGCCACTTCAATTACTTGCTTCCAAGATTTCCAGTCCAAGCTCACCTCTCTCTCCCTCCCTTCCTCTATTGTGCCTTATTGTTTTGACCCTATACTATATGTCACCAACCCCAATGGTTGTGCTCATATTGAGTCTTCCCAAGATTGGGTCTCCAAGCTTAACCAGACTGCTGCACTTGAGTCATTTGACACTGCTTGTAAGCCAGACCTCACTGATAAATCGTACTGCGATACTTGTCTGGTGTCCGGCTTTAAGGTTCAGGAAAGCTTGATCAACCTAGATGGTAACAATTCTCACTACAGAAGTTGTTGGTATATAACACTTCGCTATGCTACTGGTATGATCAATGAGGTTGGACCTGAAAGTAATGGTTCTGTTTCTTGTCTTTTTGGTTTGTCTATGGATTCTCATGTGGGTTCACCCAAAAAGAGAATTACCACTACTGTAATAGTAATAGTATCAGTAGCAGCAGGATTGCTTACAATACTTATATCATACTATGTATGGAGGAAAAGTTTGGCAAAAGGAAGGAGTATATTAGTTGCTACAAACAATTTCTGTGAAGCTAATAAACTTGGAGAGGGGGGATTTGGCCCTGTTTATAAGGGGATTTTGCCTAGAAATAAAGAAGTAGCCATGAAAAGATTGTCAAAGAAGTCTGGGCAAGGACATCAAGAATTTGTTAATGAGTTCAAGCTTATGGCCAAGCTCCAACATACCAATCTTGTTAGGCTCTTGGGTTGCTGTAGTGAAGAGGAGGAAATGATATTGGTTTATGACGGCTACATGTCACCTGAGTATGGACGCTTTGACCATTTCTCTGAAAAATCGGATGTATTTAGCTTCGGAGTGCTGCTGTTGGAGATTGTAAGTGGGAAGAGAAATGCTGCTTTGAAGCGTCAGAGGAAACATGGTGAGATCATAAGTAACATTGGTGGAAAGAATGACACAGAACTACCAGTGTTTGACTTGAAGAGTATATTAGCTGCTACTGAAGACTTCTCTGCTGCAAATAAACTGGGTGACGGAGGATTTGGCCCTGTTTATAAGTGTTGGTCATTCTTCATGGTTTGTTCATCAGATCCATCTGAAAGAACAAAATTGGATTGGGATAGACGCTTTAGAATTATAGAAGGCATTGGTCAAGGACGTACTACTTTATATCCACAAGCCTGGAAACTGTGGAAAAAGGGTAGAGGAATGGAGGTAATTGATGAACCAGTAAGGGAAACATGTCGACCTCATGAAGCTTTAAGGTGTATCCATGTAGGGTTTCTGTGTGTTCAAGAAGCCCCATCTGATCGACCAACAATGTTTTCTGTAGTTCATATGTTGCAAGCCGAAGAAAGTACGACACTTCCACCCTCCAAAGAACCTGCATTTTCAACACACAAGAATTCCAGTGCTGCTAGTTCTTCTTCTCAAACATCTAGAATTTTTTCCGCCAATCAATTGACCGTCAGTATCAGGTCGACAGAGGTTCAATGTCAGTCGGTGATAAATCTTCCGACAGTATATACCTTGGCCTTTGATCAATTAAATGCTCGAATTGTGCTTCAGAGTTTCTATGGGTCCAATTCTGGTGTGTCGCATAAGGCCAAGCTCAACCATTTATGTCACTAA

Protein Analysis

759

Amino Acids

84.76

Weight (kDa)

8.41

Isoelectric Point (pI)

50.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 152 - 322 1.2e-35 SPARK
Pkinase PF00069 408 - 478 6.3e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 409 - 478 7.7e-14 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 481 - 514 5.4e-06 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 668 - 708 6.1e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1260, 1704
Acc36I ACCTGC 1 cut(s) 2041
AccI GTMKAC 2 cut(s) 1894, 2129
AciI CCGC 3 cut(s) 166, 536, 2100
AclWI GGATC 2 cut(s) 483, 1733
AcoI YGGCCR 1 cut(s) 1359
AcsI RAATTY 5 cut(s) 367, 445, 1334, 2053, 2091
AcuI CTGAAG 2 cut(s) 1671, 2198
AfaI GTAC 3 cut(s) 881, 1810, 2008
AfiI CCNNNNNNNGG 3 cut(s) 801, 802, 1457
AflIII ACRYGT 2 cut(s) 1443, 1889
AgsI TTSAA 9 cut(s) 450, 505, 666, 1351, 1552, 1630, 1943, 2043, 2141
AjnI CCWGG 2 cut(s) 102, 1829
AjuI GAANNNNNNNTTGG 2 cut(s) 1957, 1989
Alw21I GWGCWC 1 cut(s) 781
Alw26I GTCTC 2 cut(s) 286, 811
AlwI GGATC 2 cut(s) 483, 1733
AoxI GGCC 7 cut(s) 51, 607, 1249, 1359, 1693, 2181, 2253
ApeKI GCWGC 7 cut(s) 827, 1124, 1510, 1544, 1643, 1664, 2063
ApoI RAATTY 5 cut(s) 367, 445, 1334, 2053, 2091
ArsI GACNNNNNNTTYG 2 cut(s) 1673, 1705
Asp700I GAANNNNTTC 1 cut(s) 2095
AspS9I GGNCC 6 cut(s) 52, 168, 1013, 1250, 1694, 2229
AvaII GGWCC 3 cut(s) 168, 1013, 2229
BalI TGGCCA 1 cut(s) 1361
BbsI GAAGAC 2 cut(s) 783, 1659
Bbv12I GWGCWC 1 cut(s) 781
BbvI GCAGC 7 cut(s) 814, 1136, 1497, 1531, 1630, 1651, 2050
BccI CCATC 3 cut(s) 932, 1750, 1960
BceAI ACGGC 1 cut(s) 1453
BciT130I CCWGG 2 cut(s) 104, 1831
BciVI GTATCC 1 cut(s) 1928
BclI TGATCA 4 cut(s) 180, 927, 999, 2188
BcoDI GTCTC 2 cut(s) 286, 811
BfaI CTAG 4 cut(s) 935, 1275, 2067, 2088
BfmI CTRYAG 3 cut(s) 955, 1402, 1977
BfuAI ACCTGC 1 cut(s) 2041
BfuI GTATCC 1 cut(s) 1928
BisI GCNGC 7 cut(s) 828, 1125, 1511, 1545, 1644, 1665, 2064
BlsI GCNGC 7 cut(s) 829, 1126, 1512, 1546, 1645, 1666, 2065
Bme1390I CCNGG 2 cut(s) 104, 1831
Bme18I GGWCC 3 cut(s) 168, 1013, 2229
BmgT120I GGNCC 6 cut(s) 52, 168, 1013, 1250, 1694, 2229
BmiI GGNNCC 1 cut(s) 2230
BmrFI CCNGG 2 cut(s) 104, 1831
BmrI ACTGGG 1 cut(s) 1685
BmsI GCATC 1 cut(s) 245
BmuI ACTGGG 1 cut(s) 1685
BpiI GAAGAC 2 cut(s) 783, 1659
BpuEI CTTGAG 2 cut(s) 290, 854
BsaI GGTCTC 1 cut(s) 811
BsaJI CCNNGG 2 cut(s) 471, 2178
BsaXI ACNNNNNCTCC 2 cut(s) 1156, 1186
Bsc4I CCNNNNNNNGG 3 cut(s) 801, 802, 1457
Bse3DI GCAATG 1 cut(s) 597
BseBI CCWGG 2 cut(s) 104, 1831
BseDI CCNNGG 2 cut(s) 471, 2178
BseGI GGATG 1 cut(s) 1495
BseLI CCNNNNNNNGG 3 cut(s) 801, 802, 1457
BseMI GCAATG 1 cut(s) 597
BseMII CTCAG 3 cut(s) 297, 493, 1443
BseRI GAGGAG 2 cut(s) 345, 1427
BseXI GCAGC 7 cut(s) 814, 1136, 1497, 1531, 1630, 1651, 2050
BsgI GTGCAG 1 cut(s) 813
BshFI GGCC 7 cut(s) 53, 609, 1251, 1361, 1695, 2183, 2255
BsiHKAI GWGCWC 1 cut(s) 781
BsiSI CCGG 1 cut(s) 903
BslI CCNNNNNNNGG 3 cut(s) 801, 802, 1457
BsmAI GTCTC 2 cut(s) 286, 811
BsnI GGCC 7 cut(s) 53, 609, 1251, 1361, 1695, 2183, 2255
Bso31I GGTCTC 1 cut(s) 811
Bsp1286I GDGCHC 1 cut(s) 781
Bsp143I GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
Bsp19I CCATGG 1 cut(s) 471
BspACI CCGC 3 cut(s) 166, 536, 2100
BspANI GGCC 7 cut(s) 53, 609, 1251, 1361, 1695, 2183, 2255
BspCNI CTCAG 3 cut(s) 296, 492, 1444
BspHI TCATGA 1 cut(s) 1900
BspLI GGNNCC 1 cut(s) 2230
BspMI ACCTGC 1 cut(s) 2041
BspPI GGATC 2 cut(s) 483, 1733
BspTNI GGTCTC 1 cut(s) 811
BsrDI GCAATG 1 cut(s) 597
BssECI CCNNGG 2 cut(s) 471, 2178
BssMI GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
BssT1I CCWWGG 2 cut(s) 471, 2178
Bst2UI CCWGG 2 cut(s) 104, 1831
Bst4CI ACNGT 4 cut(s) 1102, 1839, 2116, 2170
Bst6I CTCTTC 3 cut(s) 1404, 1529, 1625
BstC8I GCNNGC 1 cut(s) 1995
BstDEI CTNAG 4 cut(s) 283, 479, 491, 1452
BstDSI CCRYGG 1 cut(s) 471
BstF5I GGATG 1 cut(s) 1495
BstKTI GATC 9 cut(s) 67, 183, 478, 930, 1002, 1578, 1741, 1960, 2191
BstMAI GTCTC 2 cut(s) 286, 811
BstMBI GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
BstNI CCWGG 2 cut(s) 104, 1831
BstNSI RCATGY 3 cut(s) 468, 1447, 1893
BstSCI CCNGG 2 cut(s) 102, 1829
BstSFI CTRYAG 3 cut(s) 955, 1402, 1977
BstV1I GCAGC 7 cut(s) 814, 1136, 1497, 1531, 1630, 1651, 2050
BstV2I GAAGAC 2 cut(s) 783, 1659
BstX2I RGATCY 2 cut(s) 475, 1738
BstXI CCANNNNNNTGG 1 cut(s) 1830
BstYI RGATCY 2 cut(s) 475, 1738
BsuI GTATCC 1 cut(s) 1928
BsuRI GGCC 7 cut(s) 53, 609, 1251, 1361, 1695, 2183, 2255
BtgI CCRYGG 1 cut(s) 471
BtsCI GGATG 1 cut(s) 1495
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 5 cut(s) 378, 846, 867, 1623, 2065
BveI ACCTGC 1 cut(s) 2041
Cac8I GCNNGC 1 cut(s) 1995
CciI TCATGA 1 cut(s) 1900
Cfr13I GGNCC 6 cut(s) 52, 168, 1013, 1250, 1694, 2229
CseI GACGC 3 cut(s) 1470, 1544, 1782
Csp6I GTAC 3 cut(s) 880, 1809, 2007
CviQI GTAC 3 cut(s) 880, 1809, 2007
DdeI CTNAG 4 cut(s) 283, 479, 491, 1452
DpnI GATC 9 cut(s) 66, 182, 477, 929, 1001, 1577, 1740, 1959, 2190
DpnII GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
EaeI YGGCCR 1 cut(s) 1359
Eam1104I CTCTTC 3 cut(s) 1404, 1529, 1625
EarI CTCTTC 3 cut(s) 1404, 1529, 1625
EciI GGCGGA 1 cut(s) 2089
Eco130I CCWWGG 2 cut(s) 471, 2178
Eco147I AGGCCT 1 cut(s) 609
Eco31I GGTCTC 1 cut(s) 811
Eco47I GGWCC 3 cut(s) 168, 1013, 2229
Eco57I CTGAAG 2 cut(s) 1671, 2198
EcoRI GAATTC 1 cut(s) 2053
EcoRII CCWGG 2 cut(s) 102, 1829
EcoT14I CCWWGG 2 cut(s) 471, 2178
ErhI CCWWGG 2 cut(s) 471, 2178
FauI CCCGC 1 cut(s) 543
FauNDI CATATG 1 cut(s) 1986
FbaI TGATCA 4 cut(s) 180, 927, 999, 2188
FblI GTMKAC 2 cut(s) 1894, 2129
Fnu4HI GCNGC 7 cut(s) 828, 1125, 1511, 1545, 1644, 1665, 2064
FokI GGATG 1 cut(s) 1502
Fsp4HI GCNGC 7 cut(s) 828, 1125, 1511, 1545, 1644, 1665, 2064
FspBI CTAG 4 cut(s) 935, 1275, 2067, 2088
GluI GCNGC 7 cut(s) 828, 1125, 1511, 1545, 1644, 1665, 2064
HaeIII GGCC 7 cut(s) 53, 609, 1251, 1361, 1695, 2183, 2255
HapII CCGG 1 cut(s) 903
HgaI GACGC 3 cut(s) 1470, 1544, 1782
HincII GTYRAC 2 cut(s) 1895, 2130
HindII GTYRAC 2 cut(s) 1895, 2130
HindIII AAGCTT 4 cut(s) 812, 922, 1352, 1905
HinfI GANTC 5 cut(s) 155, 495, 788, 836, 1061
HpaII CCGG 1 cut(s) 903
Hpy166II GTNNAC 3 cut(s) 1076, 1895, 2130
Hpy188III TCNNGA 6 cut(s) 130, 917, 1331, 1901, 1943, 2088
Hpy8I GTNNAC 3 cut(s) 1076, 1895, 2130
HpyAV CCTTC 4 cut(s) 511, 726, 1179, 1784
HpyCH4III ACNGT 4 cut(s) 1102, 1839, 2116, 2170
HpyCH4IV ACGT 3 cut(s) 290, 456, 1807
HpyCH4V TGCA 7 cut(s) 277, 296, 602, 830, 1667, 1993, 2036
HpyF3I CTNAG 4 cut(s) 283, 479, 491, 1452
HpySE526I ACGT 3 cut(s) 290, 456, 1807
Ksp22I TGATCA 4 cut(s) 180, 927, 999, 2188
Kzo9I GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
LmnI GCTCC 2 cut(s) 358, 1371
Lsp1109I GCAGC 7 cut(s) 814, 1136, 1497, 1531, 1630, 1651, 2050
LweI GCATC 1 cut(s) 245
MaeI CTAG 4 cut(s) 935, 1275, 2067, 2088
MaeII ACGT 3 cut(s) 290, 456, 1807
MaeIII GTNAC 8 cut(s) 214, 457, 757, 941, 1446, 1583, 1679, 2273
MalI GATC 9 cut(s) 66, 182, 477, 929, 1001, 1577, 1740, 1959, 2190
MboI GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
MfeI CAATTG 1 cut(s) 2108
MflI RGATCY 2 cut(s) 475, 1738
MhlI GDGCHC 1 cut(s) 781
MlsI TGGCCA 1 cut(s) 1361
MluNI TGGCCA 1 cut(s) 1361
MlyI GAGTC 2 cut(s) 797, 845
MmeI TCCRAC 4 cut(s) 991, 1393, 1497, 2189
Mox20I TGGCCA 1 cut(s) 1361
MroXI GAANNNNTTC 1 cut(s) 2095
MscI TGGCCA 1 cut(s) 1361
MseI TTAA 6 cut(s) 93, 816, 909, 1341, 1910, 2195
MslI CAYNNNNRTG 1 cut(s) 251
Msp20I TGGCCA 1 cut(s) 1361
MspI CCGG 1 cut(s) 903
MspR9I CCNGG 2 cut(s) 104, 1831
MunI CAATTG 1 cut(s) 2108
MvaI CCWGG 2 cut(s) 104, 1831
NcoI CCATGG 1 cut(s) 471
NdeI CATATG 1 cut(s) 1986
NdeII GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
NlaIV GGNNCC 1 cut(s) 2230
NmuCI GTSAC 5 cut(s) 214, 757, 1446, 1679, 2273
NspI RCATGY 3 cut(s) 468, 1447, 1893
PagI TCATGA 1 cut(s) 1900
PceI AGGCCT 1 cut(s) 609
PciI ACATGT 2 cut(s) 1443, 1889
PdmI GAANNNNTTC 1 cut(s) 2095
PfeI GAWTC 3 cut(s) 155, 495, 1061
PkrI GCNGC 7 cut(s) 829, 1126, 1512, 1546, 1645, 1666, 2065
PleI GAGTC 2 cut(s) 796, 844
PpsI GAGTC 2 cut(s) 796, 844
PscI ACATGT 2 cut(s) 1443, 1889
PsiI TTATAA 2 cut(s) 1260, 1704
Psp6I CCWGG 2 cut(s) 102, 1829
PspGI CCWGG 2 cut(s) 102, 1829
PspN4I GGNNCC 1 cut(s) 2230
PspPI GGNCC 6 cut(s) 52, 168, 1013, 1250, 1694, 2229
PsuI RGATCY 2 cut(s) 475, 1738
RsaI GTAC 3 cut(s) 881, 1810, 2008
RsaNI GTAC 3 cut(s) 880, 1809, 2007
RseI CAYNNNNRTG 1 cut(s) 251
SalI GTCGAC 2 cut(s) 1893, 2128
SaqAI TTAA 6 cut(s) 93, 816, 909, 1341, 1910, 2195
SatI GCNGC 7 cut(s) 828, 1125, 1511, 1545, 1644, 1665, 2064
Sau3AI GATC 9 cut(s) 64, 180, 475, 927, 999, 1575, 1738, 1957, 2188
Sau96I GGNCC 6 cut(s) 52, 168, 1013, 1250, 1694, 2229
SchI GAGTC 2 cut(s) 797, 845
ScrFI CCNGG 2 cut(s) 104, 1831
SduI GDGCHC 1 cut(s) 781
SfaNI GCATC 1 cut(s) 245
SfcI CTRYAG 3 cut(s) 955, 1402, 1977
SinI GGWCC 3 cut(s) 168, 1013, 2229
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 2 cut(s) 269, 833
SmoI CTYRAG 2 cut(s) 269, 833
SseBI AGGCCT 1 cut(s) 609
SsiI CCGC 3 cut(s) 166, 536, 2100
SspMI CTAG 4 cut(s) 935, 1275, 2067, 2088
StuI AGGCCT 1 cut(s) 609
StyD4I CCNGG 2 cut(s) 102, 1829
StyI CCWWGG 2 cut(s) 471, 2178
TaaI ACNGT 4 cut(s) 1102, 1839, 2116, 2170
TaiI ACGT 3 cut(s) 293, 459, 1810
TaqI TCGA 4 cut(s) 1894, 1960, 2129, 2203
TfiI GAWTC 3 cut(s) 155, 495, 1061
Tru1I TTAA 6 cut(s) 93, 816, 909, 1341, 1910, 2195
Tru9I TTAA 6 cut(s) 93, 816, 909, 1341, 1910, 2195
TscAI CASTG 5 cut(s) 378, 853, 874, 1623, 2065
TseFI GTSAC 5 cut(s) 214, 757, 1446, 1679, 2273
TseI GCWGC 7 cut(s) 827, 1124, 1510, 1544, 1643, 1664, 2063
Tsp45I GTSAC 5 cut(s) 214, 757, 1446, 1679, 2273
TspDTI ATGAA 8 cut(s) 392, 501, 1310, 1711, 1722, 1887, 1917, 1973
TspGWI ACGGA 1 cut(s) 1698
TspRI CASTG 5 cut(s) 378, 853, 874, 1623, 2065
VpaK11BI GGWCC 3 cut(s) 168, 1013, 2229
XapI RAATTY 5 cut(s) 367, 445, 1334, 2053, 2091
XbaI TCTAGA 1 cut(s) 2087
XceI RCATGY 3 cut(s) 468, 1447, 1893
XmiI GTMKAC 2 cut(s) 1894, 2129
XmnI GAANNNNTTC 1 cut(s) 2095
XspI CTAG 4 cut(s) 935, 1275, 2067, 2088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.