Rmu_sc0005860.1_g000004

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005860.1
OG0000114
Physical Location & Seq
Forward (+)
15100 .. 17512
2413 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005860.1_g000004.1.cds

Sequence Viewer

Length: 1845 bp
atgtggtacttcttggtgttgtttctagttctacttcctctctcaactagccaatctctaaagtcaaccacggttaacagaacaacatgccctatggatctcagttatgttcttagaatccccttcgattcttcatcatgcaaaaactttgattcccagaccaaaatggacgccacccaacacttatgttgtcaaaccatcctacctctttttggaataggccttgcccaatacctgaaagccaccggtgttttcctgctccccaacatagccacctcaacttcttgcctccaaaacttacagtccaggctcacctctctctcccttccttccgatcttgtttcttattgttataatccttcacaatatgtcaccagcccaagtttctgtgccggtattaagacttcccaagattggatctccaagcttaatcagactactgcatttgactctgattgtagctcagacctcacttctctctcatcctgcagtgcttgcttagaggccgggattaaggttcacaaacaattgatggcccttgatggcaacacttctcgctctggaaattgttttttctatacggcgctttatgcagcagcttcatttgactctgaacccggaagtgatggtgccatgacctgcattttggggttgtcaataactgcggattctcctgtggcttcaccaaagaagagcaagaagagaaataccactctcgtaattgcaatagtttctgcatcaacaggattgcttacaatagtttttctttactttttatggaagaaaactttcggaaagccaagggagtatagtgagattataaggaatgttagtgctggaggtgcacagaatgaaacagaactaccaatctttagtttaaggagtatattagctgctacaaacaatttctatgaagctaataaacttggagagggaggatttggccctgtttataaggggattttgcctgaaaatcaagaagtagccataaagagactgtcaaagaaatccgggcaaggatataaggagttcatgaatgagttaaaacttatagccaagcttcaacatacaaatcttgttaggctcttgggttgctgtattgaagaggaggaattgatattgatctatgagtacatgcccaatcgaagtttggacaaatttttgtttgatccatctgaaaacacaagattggattggagtaaacgttttcaaatcatagaaggtattgctcaaggggtactttatatccacaagcactccagattgaagatcattcacagggatctcaaagctagtaatgttctgttggatggagaaatgaatcccaaaatttccgactttggaatggcaaagattttcaacatgaatcaaacagaagcaaatactaacagggttgttggaacatacggttacatgtctcccgagtatgcacgttatggtcatttctctgagaaattggatgtgttcagctttggagtgttgctgttggagattgtaagtggaaaaaagaatggtgctttccatcatgttgaacattcaccaactcttgctggatgggcttggaaattatggaaagaaggtaaaggaatggaggtaattgatgcatcaatgagaaaaacatgtctccctcatgaagctttaagatgtatccatgttgcatttttgtgtgttcaagaagctccagctgatcgaccagcaatgtcttccgtagttcacatgctggccaatgaagcaataccacttccactcttcaaagaacctgcattttcaacggagagtactttttgtgatgttggttcttctccatcaaatggagtcaccattactatcccagaaggtcgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

614

Amino Acids

67.9

Weight (kDa)

8.0

Isoelectric Point (pI)

47.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 354, 821, 954
Acc36I ACCTGC 2 cut(s) 647, 1768
AccB1I GGYRCC 1 cut(s) 629
AccB7I CCANNNNNTGG 1 cut(s) 1811
AciI CCGC 1 cut(s) 665
AclI AACGTT 1 cut(s) 1204
AclWI GGATC 4 cut(s) 105, 425, 1163, 1290
AcoI YGGCCR 1 cut(s) 1722
AcsI RAATTY 2 cut(s) 1157, 1329
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 4 cut(s) 8, 1133, 1239, 1780
AfiI CCNNNNNNNGG 3 cut(s) 212, 414, 1811
AflIII ACRYGT 2 cut(s) 1413, 1619
AgeI ACCGGT 1 cut(s) 245
AgsI TTSAA 9 cut(s) 1064, 1103, 1211, 1267, 1360, 1532, 1673, 1753, 1770
AjnI CCWGG 1 cut(s) 305
Alw21I GWGCWC 1 cut(s) 847
Alw26I GTCTC 3 cut(s) 988, 1422, 1628
Alw44I GTGCAC 1 cut(s) 843
AlwI GGATC 4 cut(s) 105, 425, 1163, 1290
Ama87I CYCGRG 1 cut(s) 1421
AoxI GGCC 5 cut(s) 220, 504, 534, 943, 1722
ApaLI GTGCAC 1 cut(s) 843
ApeKI GCWGC 3 cut(s) 593, 596, 893
ApoI RAATTY 2 cut(s) 1157, 1329
ArsI GACNNNNNNTTYG 2 cut(s) 628, 660
AsiGI ACCGGT 1 cut(s) 245
Asp700I GAANNNNTTC 1 cut(s) 788
AspLEI GCGC 1 cut(s) 586
AspS9I GGNCC 2 cut(s) 535, 944
AsuC2I CCSGG 3 cut(s) 508, 618, 1012
AsuHPI GGTGA 5 cut(s) 304, 364, 675, 1530, 1810
AvaI CYCGRG 1 cut(s) 1421
BaeGI GKGCMC 1 cut(s) 847
BalI TGGCCA 1 cut(s) 1724
BanI GGYRCC 1 cut(s) 629
BarI GAAGNNNNNNTAC 2 cut(s) 388, 420
BbsI GAAGAC 1 cut(s) 1695
Bbv12I GWGCWC 1 cut(s) 847
BbvI GCAGC 3 cut(s) 605, 608, 880
BccI CCATC 9 cut(s) 206, 526, 536, 620, 1180, 1304, 1530, 1548, 1813
BceAI ACGGC 1 cut(s) 597
BciT130I CCWGG 1 cut(s) 307
BciVI GTATCC 1 cut(s) 1658
BcnI CCSGG 3 cut(s) 508, 618, 1012
BcoDI GTCTC 3 cut(s) 988, 1422, 1628
BfaI CTAG 3 cut(s) 26, 48, 1293
BfmI CTRYAG 1 cut(s) 487
BfoI RGCGCY 1 cut(s) 587
BfuAI ACCTGC 2 cut(s) 647, 1768
BfuI GTATCC 1 cut(s) 1658
BisI GCNGC 3 cut(s) 594, 597, 894
BlsI GCNGC 3 cut(s) 595, 598, 895
BmcAI AGTACT 1 cut(s) 1780
Bme1390I CCNGG 4 cut(s) 307, 508, 618, 1012
BmeT110I CYCGRG 1 cut(s) 1421
BmgT120I GGNCC 2 cut(s) 535, 944
BmiI GGNNCC 1 cut(s) 631
BmrFI CCNGG 4 cut(s) 307, 508, 618, 1012
BmsI GCATC 3 cut(s) 746, 1591, 1613
BpiI GAAGAC 1 cut(s) 1695
BpmI CTGGAG 3 cut(s) 858, 1243, 1665
BpuEI CTTGAG 1 cut(s) 1215
BpuMI CCSGG 3 cut(s) 508, 618, 1012
BsaBI GATNNNNATC 1 cut(s) 1121
BsaHI GRCGYC 1 cut(s) 171
BsaJI CCNNGG 2 cut(s) 69, 800
BsaWI WCCGGW 1 cut(s) 245
BsaXI ACNNNNNCTCC 4 cut(s) 1189, 1219, 1241, 1271
Bsc4I CCNNNNNNNGG 3 cut(s) 212, 414, 1811
Bse118I RCCGGY 2 cut(s) 245, 392
Bse3DI GCAATG 1 cut(s) 1704
Bse8I GATNNNNATC 1 cut(s) 1121
BseBI CCWGG 1 cut(s) 307
BseDI CCNNGG 2 cut(s) 69, 800
BseGI GGATG 5 cut(s) 198, 482, 1315, 1465, 1559
BseJI GATNNNNATC 1 cut(s) 1121
BseLI CCNNNNNNNGG 3 cut(s) 212, 414, 1811
BseMI GCAATG 1 cut(s) 1704
BseMII CTCAG 3 cut(s) 115, 477, 1440
BseRI GAGGAG 1 cut(s) 1121
BseSI GKGCMC 1 cut(s) 847
BseXI GCAGC 3 cut(s) 605, 608, 880
BshFI GGCC 5 cut(s) 222, 506, 536, 945, 1724
BshNI GGYRCC 1 cut(s) 629
BshTI ACCGGT 1 cut(s) 245
BsiHKAI GWGCWC 1 cut(s) 847
BsiHKCI CYCGRG 1 cut(s) 1421
BsiSI CCGG 5 cut(s) 246, 393, 507, 618, 1011
BslI CCNNNNNNNGG 3 cut(s) 212, 414, 1811
BsmAI GTCTC 3 cut(s) 988, 1422, 1628
BsnI GGCC 5 cut(s) 222, 506, 536, 945, 1724
BsoBI CYCGRG 1 cut(s) 1421
Bsp1286I GDGCHC 1 cut(s) 847
Bsp143I GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
BspACI CCGC 1 cut(s) 665
BspANI GGCC 5 cut(s) 222, 506, 536, 945, 1724
BspCNI CTCAG 3 cut(s) 114, 476, 1441
BspHI TCATGA 2 cut(s) 1032, 1630
BspLI GGNNCC 1 cut(s) 631
BspMAI CTGCAG 1 cut(s) 491
BspMI ACCTGC 2 cut(s) 647, 1768
BspPI GGATC 4 cut(s) 105, 425, 1163, 1290
BspQI GCTCTTC 1 cut(s) 686
BspT107I GGYRCC 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 1704
BsrFI RCCGGY 2 cut(s) 245, 392
BssAI RCCGGY 2 cut(s) 245, 392
BssECI CCNNGG 2 cut(s) 69, 800
BssMI GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
BssNI GRCGYC 1 cut(s) 171
BssT1I CCWWGG 1 cut(s) 800
Bst2UI CCWGG 1 cut(s) 307
Bst4CI ACNGT 4 cut(s) 73, 303, 999, 1409
Bst6I CTCTTC 4 cut(s) 686, 695, 1098, 1754
BstACI GRCGYC 1 cut(s) 171
BstAPI GCANNNNNTGC 1 cut(s) 495
BstC8I GCNNGC 2 cut(s) 496, 1722
BstDEI CTNAG 5 cut(s) 101, 113, 463, 499, 1449
BstDSI CCRYGG 1 cut(s) 69
BstF5I GGATG 5 cut(s) 198, 482, 1315, 1465, 1559
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 1 cut(s) 586
BstKTI GATC 8 cut(s) 100, 337, 420, 1125, 1171, 1272, 1285, 1690
BstMAI GTCTC 3 cut(s) 988, 1422, 1628
BstMBI GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
BstMWI GCNNNNNNNGC 5 cut(s) 495, 590, 842, 1556, 1730
BstNI CCWGG 1 cut(s) 307
BstNSI RCATGY 5 cut(s) 90, 1138, 1417, 1623, 1720
BstSCI CCNGG 4 cut(s) 305, 506, 616, 1010
BstSFI CTRYAG 1 cut(s) 487
BstSLI GKGCMC 1 cut(s) 847
BstV1I GCAGC 3 cut(s) 605, 608, 880
BstV2I GAAGAC 1 cut(s) 1695
BstX2I RGATCY 3 cut(s) 97, 417, 1282
BstYI RGATCY 3 cut(s) 97, 417, 1282
BsuI GTATCC 1 cut(s) 1658
BsuRI GGCC 5 cut(s) 222, 506, 536, 945, 1724
BtgI CCRYGG 1 cut(s) 69
BtsCI GGATG 5 cut(s) 198, 482, 1315, 1465, 1559
BtsI GCAGTG 1 cut(s) 496
BtsIMutI CAGTG 1 cut(s) 496
BveI ACCTGC 2 cut(s) 647, 1768
Cac8I GCNNGC 2 cut(s) 496, 1722
CciI TCATGA 2 cut(s) 1032, 1630
CfoI GCGC 1 cut(s) 586
Cfr10I RCCGGY 2 cut(s) 245, 392
Cfr13I GGNCC 2 cut(s) 535, 944
CseI GACGC 1 cut(s) 179
Csp6I GTAC 4 cut(s) 7, 1132, 1238, 1779
CspAI ACCGGT 1 cut(s) 245
CviQI GTAC 4 cut(s) 7, 1132, 1238, 1779
DdeI CTNAG 5 cut(s) 101, 113, 463, 499, 1449
DpnI GATC 8 cut(s) 99, 336, 419, 1124, 1170, 1271, 1284, 1689
DpnII GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
EaeI YGGCCR 1 cut(s) 1722
Eam1104I CTCTTC 4 cut(s) 686, 695, 1098, 1754
EarI CTCTTC 4 cut(s) 686, 695, 1098, 1754
Eco130I CCWWGG 1 cut(s) 800
Eco147I AGGCCT 1 cut(s) 222
Eco88I CYCGRG 1 cut(s) 1421
EcoRII CCWGG 1 cut(s) 305
EcoT14I CCWWGG 1 cut(s) 800
EcoT22I ATGCAT 1 cut(s) 1606
ErhI CCWWGG 1 cut(s) 800
FalI AAGNNNNNCTT 2 cut(s) 1224, 1256
Fnu4HI GCNGC 3 cut(s) 594, 597, 894
FokI GGATG 5 cut(s) 185, 469, 1322, 1472, 1566
Fsp4HI GCNGC 3 cut(s) 594, 597, 894
FspBI CTAG 3 cut(s) 26, 48, 1293
GlaI GCGC 1 cut(s) 585
GluI GCNGC 3 cut(s) 594, 597, 894
GsuI CTGGAG 3 cut(s) 858, 1243, 1665
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 5 cut(s) 222, 506, 536, 945, 1724
HapII CCGG 5 cut(s) 246, 393, 507, 618, 1011
HgaI GACGC 1 cut(s) 179
HhaI GCGC 1 cut(s) 586
Hin1I GRCGYC 1 cut(s) 171
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HincII GTYRAC 2 cut(s) 66, 76
HindII GTYRAC 2 cut(s) 66, 76
HindIII AAGCTT 3 cut(s) 425, 1058, 1635
HinfI GANTC 9 cut(s) 117, 128, 152, 449, 608, 668, 1321, 1366, 1815
HpaI GTTAAC 1 cut(s) 76
HpaII CCGG 5 cut(s) 246, 393, 507, 618, 1011
HphI GGTGA 5 cut(s) 304, 364, 675, 1530, 1810
Hpy166II GTNNAC 6 cut(s) 66, 76, 520, 845, 1202, 1714
Hpy188I TCNGA 9 cut(s) 334, 435, 454, 466, 613, 794, 1177, 1336, 1450
Hpy188III TCNNGA 7 cut(s) 561, 977, 1033, 1260, 1421, 1631, 1673
Hpy8I GTNNAC 6 cut(s) 66, 76, 520, 845, 1202, 1714
HpyAV CCTTC 7 cut(s) 133, 335, 339, 369, 1214, 1571, 1829
HpyCH4III ACNGT 4 cut(s) 73, 303, 999, 1409
HpyCH4IV ACGT 2 cut(s) 1204, 1432
HpyF10VI GCNNNNNNNGC 5 cut(s) 495, 590, 842, 1556, 1730
HpyF3I CTNAG 5 cut(s) 101, 113, 463, 499, 1449
HpySE526I ACGT 2 cut(s) 1204, 1432
Hsp92I GRCGYC 1 cut(s) 171
HspAI GCGC 1 cut(s) 584
KspAI GTTAAC 1 cut(s) 76
Kzo9I GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
LguI GCTCTTC 1 cut(s) 686
LmnI GCTCC 2 cut(s) 264, 1684
Lsp1109I GCAGC 3 cut(s) 605, 608, 880
LweI GCATC 3 cut(s) 746, 1591, 1613
MaeI CTAG 3 cut(s) 26, 48, 1293
MaeII ACGT 2 cut(s) 1204, 1432
MaeIII GTNAC 3 cut(s) 370, 1409, 1816
MalI GATC 8 cut(s) 99, 336, 419, 1124, 1170, 1271, 1284, 1689
MboI GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
MboII GAAGA 9 cut(s) 123, 703, 712, 793, 1115, 1279, 1695, 1741, 1791
MfeI CAATTG 1 cut(s) 527
MflI RGATCY 3 cut(s) 97, 417, 1282
MhlI GDGCHC 1 cut(s) 847
MlsI TGGCCA 1 cut(s) 1724
MluNI TGGCCA 1 cut(s) 1724
MlyI GAGTC 3 cut(s) 443, 602, 1824
MmeI TCCRAC 4 cut(s) 1287, 1359, 1378, 1467
Mox20I TGGCCA 1 cut(s) 1724
Mph1103I ATGCAT 1 cut(s) 1606
MroXI GAANNNNTTC 1 cut(s) 788
MscI TGGCCA 1 cut(s) 1724
MseI TTAA 7 cut(s) 75, 399, 429, 513, 878, 1043, 1640
MslI CAYNNNNRTG 1 cut(s) 1663
Msp20I TGGCCA 1 cut(s) 1724
MspA1I CMGCKG 1 cut(s) 1685
MspI CCGG 5 cut(s) 246, 393, 507, 618, 1011
MspR9I CCNGG 4 cut(s) 307, 508, 618, 1012
MunI CAATTG 1 cut(s) 527
MvaI CCWGG 1 cut(s) 307
MwoI GCNNNNNNNGC 5 cut(s) 495, 590, 842, 1556, 1730
NciI CCSGG 3 cut(s) 508, 618, 1012
NdeII GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
NlaIV GGNNCC 1 cut(s) 631
NmuCI GTSAC 2 cut(s) 370, 1816
NsiI ATGCAT 1 cut(s) 1606
NspI RCATGY 5 cut(s) 90, 1138, 1417, 1623, 1720
PagI TCATGA 2 cut(s) 1032, 1630
PceI AGGCCT 1 cut(s) 222
PciI ACATGT 2 cut(s) 1413, 1619
PciSI GCTCTTC 1 cut(s) 686
PdmI GAANNNNTTC 1 cut(s) 788
PfeI GAWTC 6 cut(s) 117, 128, 152, 668, 1321, 1366
PflMI CCANNNNNTGG 1 cut(s) 1811
PinAI ACCGGT 1 cut(s) 245
PkrI GCNGC 3 cut(s) 595, 598, 895
PleI GAGTC 3 cut(s) 443, 602, 1823
PpsI GAGTC 3 cut(s) 443, 602, 1823
PscI ACATGT 2 cut(s) 1413, 1619
PsiI TTATAA 3 cut(s) 354, 821, 954
Psp1406I AACGTT 1 cut(s) 1204
Psp6I CCWGG 1 cut(s) 305
PspGI CCWGG 1 cut(s) 305
PspN4I GGNNCC 1 cut(s) 631
PspPI GGNCC 2 cut(s) 535, 944
PstI CTGCAG 1 cut(s) 491
PsuI RGATCY 3 cut(s) 97, 417, 1282
PvuII CAGCTG 1 cut(s) 1685
RsaI GTAC 4 cut(s) 8, 1133, 1239, 1780
RsaNI GTAC 4 cut(s) 7, 1132, 1238, 1779
RseI CAYNNNNRTG 1 cut(s) 1663
SapI GCTCTTC 1 cut(s) 686
SaqAI TTAA 7 cut(s) 75, 399, 429, 513, 878, 1043, 1640
SatI GCNGC 3 cut(s) 594, 597, 894
Sau3AI GATC 8 cut(s) 97, 334, 417, 1122, 1168, 1269, 1282, 1687
Sau96I GGNCC 2 cut(s) 535, 944
ScaI AGTACT 1 cut(s) 1780
SchI GAGTC 3 cut(s) 443, 602, 1824
ScrFI CCNGG 4 cut(s) 307, 508, 618, 1012
SduI GDGCHC 1 cut(s) 847
SfaNI GCATC 3 cut(s) 746, 1591, 1613
SfcI CTRYAG 1 cut(s) 487
SgrAI CRCCGGYG 1 cut(s) 245
SmiMI CAYNNNNRTG 1 cut(s) 1663
SmlI CTYRAG 1 cut(s) 1230
SmoI CTYRAG 1 cut(s) 1230
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 1 cut(s) 665
SspMI CTAG 3 cut(s) 26, 48, 1293
StuI AGGCCT 1 cut(s) 222
StyD4I CCNGG 4 cut(s) 305, 506, 616, 1010
StyI CCWWGG 1 cut(s) 800
TaaI ACNGT 4 cut(s) 73, 303, 999, 1409
TaiI ACGT 2 cut(s) 1207, 1435
TaqI TCGA 4 cut(s) 126, 1144, 1690, 1840
TatI WGTACW 2 cut(s) 1131, 1778
TfiI GAWTC 6 cut(s) 117, 128, 152, 668, 1321, 1366
Tru1I TTAA 7 cut(s) 75, 399, 429, 513, 878, 1043, 1640
Tru9I TTAA 7 cut(s) 75, 399, 429, 513, 878, 1043, 1640
TscAI CASTG 1 cut(s) 496
TseFI GTSAC 2 cut(s) 370, 1816
TseI GCWGC 3 cut(s) 593, 596, 893
Tsp45I GTSAC 2 cut(s) 370, 1816
TspGWI ACGGA 2 cut(s) 1696, 1787
TspRI CASTG 1 cut(s) 496
Van91I CCANNNNNTGG 1 cut(s) 1811
VneI GTGCAC 1 cut(s) 843
XapI RAATTY 2 cut(s) 1157, 1329
XceI RCATGY 5 cut(s) 90, 1138, 1417, 1623, 1720
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XmnI GAANNNNTTC 1 cut(s) 788
XspI CTAG 3 cut(s) 26, 48, 1293
ZrmI AGTACT 1 cut(s) 1780
Zsp2I ATGCAT 1 cut(s) 1606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.