Rroxscaffold_4G00321410

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000114
Physical Location & Seq
Reverse (-)
50870124 .. 50873283
3160 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00321410.1

Sequence Viewer

Length: 2112 bp
ATGGGGTGGCTCTTGTGTTACCTTGTAACACTGCTCTTATCTCACATCCTCTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAGTATATCAGTGGTAACATGACTTTGGTTTCTTCCTTTGAGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCCCAAATACTGCATCAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGTAGCGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAATGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTAAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTGTGATACTGTGTTGCCTGGCATTAAGATTAGCTTGAACAAAAAGACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCCGGAAAGTACACCTTGGGCATAGATCCTAAAGTACCAGTTCAGGCCTTTATCTGGAAGGAAACTACTCCAATAGAAAGAAGTCCTCTGTACATTGGCAAGGATACAAGAACAGCGTTTCAAAATCCAGGTGGAACCGCGTTTTTCCTTTCATACAACTTTGATGTTGATGATGTTTATCTTACTTACATTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGCTAGATCCTACAGGGCTAGTTAAATTGCAGTTCTGGCAGAATTCTAGTAAAACGTGGTTGGAACAAGGGAGTTCACCGCCCGTTCATAACTGTGATTTTTATGCTTATTGCGGTCCCAATAGTGCCTGTCGTAGTGGTGAACCTCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCAGCAGTGGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACATGCTTGGCATGGTTTGGCAAATTACTGGATCTAGTAGAGAATCTCAACAACTCTAGACATGATATCTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCTGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGGAATTTTGCAAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATAATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGCTGTATGGAAGGAGATGAAATGATATTGATCTATGAGTACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCTTTTGAAAAGACAAGGTTAGATTGGGATACTCGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTACTATATATTCACAAGTACTCTAGATTGAAAATCATCCACAGAGATCTAAAAGCAAGTAATGTTCTGTTGGATGGAACAATGAACCCCAAAGTGTCCGACTTTGGAATGGCGAGAATTTTTGATATAAATCAAATTGAAGCAAATACCAACAAGGTTGTTGGGACATACGGTTACATGTCTCCTGAATATGCATTATATGGTCATTTCTCCGAGAAGTTGGATGTATTTAGCTTTGGAGTATTGTTGTTAGAGATTATAAGTGGAAAGAAGAATGCTTCTTTTTATCGTTTTGAAAATTCACTAACACTTGCTCAGTGGGTATGGGAATTATGGAAAGAAGGTAGAGGAATGGAGGTAATTGACGAGTCAGTAAAGGAAACATGCCGAATTCATGAAGCTTTGAGGTGTATCCATGTCGGGCTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCGGTGATTCATATGCTCGAGGTCAATGAAGCTACATCACTTCCACACTCCAAAGAACCTGGATTTTCAACATGTAGGAATTCAAGTCATGTTACCACTTATTCTAACAATGTAGTTACTATTACTTTGCCAGAACCTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

703

Amino Acids

78.91

Weight (kDa)

6.95

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 172 5.5e-31 D-mannose binding lectin
S_locus_glycop PF00954 233 - 316 3.7e-16 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 411 - 661 2.3e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 411 - 660 2.8e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1760
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 501
AccI GTMKAC 1 cut(s) 184
AccII CGCG 1 cut(s) 677
AciI CCGC 4 cut(s) 675, 839, 873, 1201
AclWI GGATC 6 cut(s) 306, 524, 557, 761, 1110, 1427
AcoI YGGCCR 2 cut(s) 490, 1248
AcsI RAATTY 9 cut(s) 160, 197, 802, 1224, 1421, 1617, 1798, 1890, 2047
AcyI GRCGYC 1 cut(s) 502
AdeI CACNNNGTG 1 cut(s) 420
AfaI GTAC 8 cut(s) 61, 81, 548, 573, 629, 1397, 1503, 1520
AfiI CCNNNNNNNGG 4 cut(s) 539, 591, 1200, 1257
AflIII ACRYGT 4 cut(s) 1010, 1398, 1677, 2039
AjnI CCWGG 5 cut(s) 82, 457, 512, 664, 2026
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw26I GTCTC 3 cut(s) 122, 736, 1686
AlwI GGATC 6 cut(s) 306, 524, 557, 761, 1110, 1427
AlwNI CAGNNNCTG 1 cut(s) 987
Ama87I CYCGRG 1 cut(s) 1985
AoxI GGCC 3 cut(s) 490, 582, 1248
ApeKI GCWGC 2 cut(s) 518, 987
ApoI RAATTY 9 cut(s) 160, 197, 802, 1224, 1421, 1617, 1798, 1890, 2047
AspLEI GCGC 2 cut(s) 504, 523
AspS9I GGNCC 3 cut(s) 875, 978, 1203
AsuC2I CCSGG 2 cut(s) 255, 540
AsuHPI GGTGA 4 cut(s) 828, 906, 911, 1984
AsuII TTCGAA 1 cut(s) 1474
AvaI CYCGRG 1 cut(s) 1985
AvaII GGWCC 3 cut(s) 875, 978, 1203
BalI TGGCCA 2 cut(s) 492, 1250
BanI GGYRCC 1 cut(s) 501
BbvI GCAGC 2 cut(s) 505, 974
BccI CCATC 3 cut(s) 272, 1049, 1568
BceAI ACGGC 1 cut(s) 1036
BciT130I CCWGG 5 cut(s) 84, 459, 514, 666, 2028
BciVI GTATCC 4 cut(s) 373, 634, 1456, 1922
BcnI CCSGG 2 cut(s) 255, 540
BcoDI GTCTC 3 cut(s) 122, 736, 1686
BfaI CTAG 9 cut(s) 306, 374, 764, 779, 807, 1106, 1128, 1166, 1524
BfmI CTRYAG 1 cut(s) 771
BfoI RGCGCY 1 cut(s) 505
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 4 cut(s) 373, 634, 1456, 1922
BglII AGATCT 1 cut(s) 1546
BisI GCNGC 2 cut(s) 519, 988
BlsI GCNGC 2 cut(s) 520, 989
BmcAI AGTACT 2 cut(s) 1503, 1520
Bme1390I CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2028
Bme18I GGWCC 3 cut(s) 875, 978, 1203
BmeT110I CYCGRG 1 cut(s) 1985
BmgT120I GGNCC 3 cut(s) 875, 978, 1203
BmiI GGNNCC 5 cut(s) 503, 673, 877, 1159, 1205
BmrFI CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2028
BmsI GCATC 2 cut(s) 221, 341
BpmI CTGGAG 2 cut(s) 1310, 1929
Bpu14I TTCGAA 1 cut(s) 1474
BpuEI CTTGAG 1 cut(s) 1479
BpuMI CCSGG 2 cut(s) 255, 540
BsaBI GATNNNNATC 4 cut(s) 282, 714, 1385, 1629
BsaHI GRCGYC 1 cut(s) 502
BsaI GGTCTC 1 cut(s) 122
BsaJI CCNNGG 4 cut(s) 178, 513, 552, 2105
BsaWI WCCGGW 1 cut(s) 383
Bsc4I CCNNNNNNNGG 4 cut(s) 539, 591, 1200, 1257
Bse1I ACTGG 6 cut(s) 370, 493, 575, 937, 981, 1104
Bse3DI GCAATG 1 cut(s) 357
Bse8I GATNNNNATC 4 cut(s) 282, 714, 1385, 1629
BseBI CCWGG 5 cut(s) 84, 459, 514, 666, 2028
BseDI CCNNGG 4 cut(s) 178, 513, 552, 2105
BseGI GGATG 7 cut(s) 45, 332, 436, 509, 1536, 1579, 1729
BseJI GATNNNNATC 4 cut(s) 282, 714, 1385, 1629
BseLI CCNNNNNNNGG 4 cut(s) 539, 591, 1200, 1257
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 3 cut(s) 283, 756, 1829
BseNI ACTGG 6 cut(s) 370, 493, 575, 937, 981, 1104
BseXI GCAGC 2 cut(s) 505, 974
Bsh1236I CGCG 1 cut(s) 677
BshFI GGCC 3 cut(s) 492, 584, 1250
BshNI GGYRCC 1 cut(s) 501
BsiHKCI CYCGRG 1 cut(s) 1985
BsiSI CCGG 3 cut(s) 254, 384, 540
BslFI GGGAC 3 cut(s) 861, 1084, 1678
BslI CCNNNNNNNGG 4 cut(s) 539, 591, 1200, 1257
BsmAI GTCTC 3 cut(s) 122, 736, 1686
BsmFI GGGAC 3 cut(s) 861, 1084, 1678
BsmI GAATGC 1 cut(s) 1780
BsnI GGCC 3 cut(s) 492, 584, 1250
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 1 cut(s) 1985
Bsp119I TTCGAA 1 cut(s) 1474
Bsp1407I TGTACA 1 cut(s) 627
BspACI CCGC 4 cut(s) 675, 839, 873, 1201
BspANI GGCC 3 cut(s) 492, 584, 1250
BspCNI CTCAG 3 cut(s) 282, 755, 1828
BspFNI CGCG 1 cut(s) 677
BspHI TCATGA 1 cut(s) 1894
BspLI GGNNCC 5 cut(s) 503, 673, 877, 1159, 1205
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 6 cut(s) 306, 524, 557, 761, 1110, 1427
BspT104I TTCGAA 1 cut(s) 1474
BspT107I GGYRCC 1 cut(s) 501
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 357
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 6 cut(s) 370, 493, 575, 937, 981, 1104
BssECI CCNNGG 4 cut(s) 178, 513, 552, 2105
BssNAI GTATAC 1 cut(s) 185
BssNI GRCGYC 1 cut(s) 502
BssT1I CCWWGG 2 cut(s) 178, 552
Bst1107I GTATAC 1 cut(s) 185
Bst2UI CCWGG 5 cut(s) 84, 459, 514, 666, 2028
Bst4CI ACNGT 4 cut(s) 90, 451, 854, 1673
BstACI GRCGYC 1 cut(s) 502
BstAUI TGTACA 1 cut(s) 627
BstBI TTCGAA 1 cut(s) 1474
BstDEI CTNAG 4 cut(s) 269, 398, 742, 1815
BstF5I GGATG 7 cut(s) 45, 332, 436, 509, 1536, 1579, 1729
BstFNI CGCG 1 cut(s) 677
BstH2I RGCGCY 1 cut(s) 505
BstHHI GCGC 2 cut(s) 504, 523
BstMAI GTCTC 3 cut(s) 122, 736, 1686
BstMWI GCNNNNNNNGC 1 cut(s) 796
BstNI CCWGG 5 cut(s) 84, 459, 514, 666, 2028
BstNSI RCATGY 6 cut(s) 1014, 1077, 1402, 1681, 1887, 2043
BstSCI CCNGG 7 cut(s) 82, 253, 457, 512, 538, 664, 2026
BstSFI CTRYAG 1 cut(s) 771
BstUI CGCG 1 cut(s) 677
BstV1I GCAGC 2 cut(s) 505, 974
BstX2I RGATCY 4 cut(s) 562, 766, 1102, 1546
BstYI RGATCY 4 cut(s) 562, 766, 1102, 1546
BstZ17I GTATAC 1 cut(s) 185
BsuI GTATCC 4 cut(s) 373, 634, 1456, 1922
BsuRI GGCC 3 cut(s) 492, 584, 1250
BtgZI GCGATG 1 cut(s) 291
BtsCI GGATG 7 cut(s) 45, 332, 436, 509, 1536, 1579, 1729
BtsI GCAGTG 2 cut(s) 29, 972
BtsIMutI CAGTG 5 cut(s) 29, 103, 972, 988, 1823
BveI ACCTGC 1 cut(s) 71
CaiI CAGNNNCTG 1 cut(s) 987
CciI TCATGA 1 cut(s) 1894
CfoI GCGC 2 cut(s) 504, 523
Cfr13I GGNCC 3 cut(s) 875, 978, 1203
Csp6I GTAC 8 cut(s) 60, 80, 547, 572, 628, 1396, 1502, 1519
CviQI GTAC 8 cut(s) 60, 80, 547, 572, 628, 1396, 1502, 1519
DdeI CTNAG 4 cut(s) 269, 398, 742, 1815
DinI GGCGCC 1 cut(s) 503
DraIII CACNNNGTG 1 cut(s) 420
EaeI YGGCCR 2 cut(s) 490, 1248
Eco130I CCWWGG 2 cut(s) 178, 552
Eco147I AGGCCT 1 cut(s) 584
Eco31I GGTCTC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 1138
Eco47I GGWCC 3 cut(s) 875, 978, 1203
Eco88I CYCGRG 1 cut(s) 1985
EcoRI GAATTC 3 cut(s) 802, 1890, 2047
EcoRII CCWGG 5 cut(s) 82, 457, 512, 664, 2026
EcoRV GATATC 1 cut(s) 1138
EcoT14I CCWWGG 2 cut(s) 178, 552
EcoT22I ATGCAT 2 cut(s) 334, 1696
EgeI GGCGCC 1 cut(s) 503
EheI GGCGCC 1 cut(s) 503
ErhI CCWWGG 2 cut(s) 178, 552
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 536, 568
FaqI GGGAC 3 cut(s) 861, 1084, 1678
FauNDI CATATG 1 cut(s) 1980
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 2 cut(s) 519, 988
FokI GGATG 7 cut(s) 32, 319, 423, 496, 1523, 1586, 1736
Fsp4HI GCNGC 2 cut(s) 519, 988
FspBI CTAG 9 cut(s) 306, 374, 764, 779, 807, 1106, 1128, 1166, 1524
GlaI GCGC 2 cut(s) 503, 522
GluI GCNGC 2 cut(s) 519, 988
GsuI CTGGAG 2 cut(s) 1310, 1929
HaeII RGCGCY 1 cut(s) 505
HaeIII GGCC 3 cut(s) 492, 584, 1250
HapII CCGG 3 cut(s) 254, 384, 540
HhaI GCGC 2 cut(s) 504, 523
Hin1I GRCGYC 1 cut(s) 502
Hin6I GCGC 2 cut(s) 502, 521
HinP1I GCGC 2 cut(s) 502, 521
HincII GTYRAC 2 cut(s) 324, 1008
HindII GTYRAC 2 cut(s) 324, 1008
HindIII AAGCTT 3 cut(s) 400, 1029, 1899
HinfI GANTC 7 cut(s) 189, 236, 248, 355, 1114, 1868, 1975
HpaII CCGG 3 cut(s) 254, 384, 540
HphI GGTGA 4 cut(s) 828, 906, 911, 1984
Hpy166II GTNNAC 6 cut(s) 185, 324, 549, 836, 902, 1008
Hpy188I TCNGA 6 cut(s) 303, 736, 954, 1162, 1600, 1714
Hpy188III TCNNGA 9 cut(s) 155, 592, 1128, 1241, 1297, 1524, 1685, 1895, 1937
Hpy8I GTNNAC 6 cut(s) 185, 324, 549, 836, 902, 1008
HpyAV CCTTC 3 cut(s) 589, 1361, 1835
HpyCH4III ACNGT 4 cut(s) 90, 451, 854, 1673
HpyCH4IV ACGT 1 cut(s) 815
HpyCH4V TGCA 9 cut(s) 212, 332, 350, 790, 921, 990, 1217, 1231, 1694
HpyF10VI GCNNNNNNNGC 1 cut(s) 796
HpyF3I CTNAG 4 cut(s) 269, 398, 742, 1815
HpySE526I ACGT 1 cut(s) 815
Hsp92I GRCGYC 1 cut(s) 502
HspAI GCGC 2 cut(s) 502, 521
KasI GGCGCC 1 cut(s) 501
LmnI GCTCC 2 cut(s) 1163, 1948
Lsp1109I GCAGC 2 cut(s) 505, 974
LweI GCATC 2 cut(s) 221, 341
MaeI CTAG 9 cut(s) 306, 374, 764, 779, 807, 1106, 1128, 1166, 1524
MaeII ACGT 1 cut(s) 815
MaeIII GTNAC 8 cut(s) 17, 25, 101, 412, 1016, 1673, 2059, 2083
MboII GAAGA 4 cut(s) 111, 139, 419, 1783
MflI RGATCY 4 cut(s) 562, 766, 1102, 1546
MlsI TGGCCA 2 cut(s) 492, 1250
MluNI TGGCCA 2 cut(s) 492, 1250
Mly113I GGCGCC 1 cut(s) 502
MlyI GAGTC 1 cut(s) 1877
MmeI TCCRAC 5 cut(s) 276, 801, 1551, 1623, 1701
Mox20I TGGCCA 2 cut(s) 492, 1250
Mph1103I ATGCAT 2 cut(s) 334, 1696
MscI TGGCCA 2 cut(s) 492, 1250
MseI TTAA 3 cut(s) 465, 783, 1188
MslI CAYNNNNRTG 5 cut(s) 217, 441, 852, 916, 922
Msp20I TGGCCA 2 cut(s) 492, 1250
MspA1I CMGCKG 1 cut(s) 1949
MspI CCGG 3 cut(s) 254, 384, 540
MspR9I CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2028
Mva1269I GAATGC 1 cut(s) 1780
MvaI CCWGG 5 cut(s) 84, 459, 514, 666, 2028
MvnI CGCG 1 cut(s) 677
MwoI GCNNNNNNNGC 1 cut(s) 796
NarI GGCGCC 1 cut(s) 502
NciI CCSGG 2 cut(s) 255, 540
NdeI CATATG 1 cut(s) 1980
NlaIV GGNNCC 5 cut(s) 503, 673, 877, 1159, 1205
NmuCI GTSAC 1 cut(s) 412
NsiI ATGCAT 2 cut(s) 334, 1696
NspI RCATGY 6 cut(s) 1014, 1077, 1402, 1681, 1887, 2043
NspV TTCGAA 1 cut(s) 1474
PaeR7I CTCGAG 1 cut(s) 1985
PagI TCATGA 1 cut(s) 1894
PceI AGGCCT 1 cut(s) 584
PciI ACATGT 4 cut(s) 1010, 1398, 1677, 2039
PctI GAATGC 1 cut(s) 1780
PfeI GAWTC 6 cut(s) 189, 236, 248, 355, 1114, 1975
PkrI GCNGC 2 cut(s) 520, 989
PleI GAGTC 1 cut(s) 1876
PluTI GGCGCC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 1876
PscI ACATGT 4 cut(s) 1010, 1398, 1677, 2039
PsiI TTATAA 1 cut(s) 1760
Psp6I CCWGG 5 cut(s) 82, 457, 512, 664, 2026
PspGI CCWGG 5 cut(s) 82, 457, 512, 664, 2026
PspN4I GGNNCC 5 cut(s) 503, 673, 877, 1159, 1205
PspPI GGNCC 3 cut(s) 875, 978, 1203
PspXI VCTCGAGB 1 cut(s) 1985
PstNI CAGNNNCTG 1 cut(s) 987
PsuI RGATCY 4 cut(s) 562, 766, 1102, 1546
PvuII CAGCTG 1 cut(s) 1949
RsaI GTAC 8 cut(s) 61, 81, 548, 573, 629, 1397, 1503, 1520
RsaNI GTAC 8 cut(s) 60, 80, 547, 572, 628, 1396, 1502, 1519
RseI CAYNNNNRTG 5 cut(s) 217, 441, 852, 916, 922
SaqAI TTAA 3 cut(s) 465, 783, 1188
SatI GCNGC 2 cut(s) 519, 988
Sau96I GGNCC 3 cut(s) 875, 978, 1203
ScaI AGTACT 2 cut(s) 1503, 1520
SchI GAGTC 1 cut(s) 1877
ScrFI CCNGG 7 cut(s) 84, 255, 459, 514, 540, 666, 2028
SfaNI GCATC 2 cut(s) 221, 341
SfcI CTRYAG 1 cut(s) 771
SfoI GGCGCC 1 cut(s) 503
Sfr274I CTCGAG 1 cut(s) 1985
SfuI TTCGAA 1 cut(s) 1474
SinI GGWCC 3 cut(s) 875, 978, 1203
SlaI CTCGAG 1 cut(s) 1985
SmiMI CAYNNNNRTG 5 cut(s) 217, 441, 852, 916, 922
SmlI CTYRAG 2 cut(s) 1494, 1985
SmoI CTYRAG 2 cut(s) 1494, 1985
SseBI AGGCCT 1 cut(s) 584
SsiI CCGC 4 cut(s) 675, 839, 873, 1201
SspDI GGCGCC 1 cut(s) 501
SspI AATATT 1 cut(s) 1066
SspMI CTAG 9 cut(s) 306, 374, 764, 779, 807, 1106, 1128, 1166, 1524
StuI AGGCCT 1 cut(s) 584
StyD4I CCNGG 7 cut(s) 82, 253, 457, 512, 538, 664, 2026
StyI CCWWGG 2 cut(s) 178, 552
TaaI ACNGT 4 cut(s) 90, 451, 854, 1673
TaiI ACGT 1 cut(s) 818
TaqI TCGA 5 cut(s) 432, 1408, 1474, 1954, 1986
TatI WGTACW 5 cut(s) 546, 627, 1395, 1501, 1518
TfiI GAWTC 6 cut(s) 189, 236, 248, 355, 1114, 1975
Tru1I TTAA 3 cut(s) 465, 783, 1188
Tru9I TTAA 3 cut(s) 465, 783, 1188
TscAI CASTG 5 cut(s) 36, 103, 972, 988, 1823
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 2 cut(s) 518, 987
Tsp45I GTSAC 1 cut(s) 412
TspGWI ACGGA 1 cut(s) 325
TspRI CASTG 5 cut(s) 36, 103, 972, 988, 1823
VpaK11BI GGWCC 3 cut(s) 875, 978, 1203
XapI RAATTY 9 cut(s) 160, 197, 802, 1224, 1421, 1617, 1798, 1890, 2047
XbaI TCTAGA 2 cut(s) 1127, 1523
XceI RCATGY 6 cut(s) 1014, 1077, 1402, 1681, 1887, 2043
XhoI CTCGAG 1 cut(s) 1985
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 9 cut(s) 306, 374, 764, 779, 807, 1106, 1128, 1166, 1524
ZrmI AGTACT 2 cut(s) 1503, 1520
Zsp2I ATGCAT 2 cut(s) 334, 1696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.