RLG00000021248

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000114
Physical Location & Seq
Reverse (-)
73333891 .. 73337094
3204 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021248

Sequence Viewer

Length: 2505 bp
ATGGGGTGGGTCTTGTGTTACCTTGTAACACTGCTCGTATCTCACATCCTGTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAGTATATCGGTGGTAACCACACTTTGGTTTCTTCCTTTGGGACCTTTTCATTAGGCTTCTTCAATCCTAATGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACACATTCCCAAATACTGCATTAGTATGGGTTGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTCTGATCAGCGGGGATGGAAATCTTGTGGTGTTGGATCAGGCTACAAATCTTGTCTGGTCAACTAATGCATCACTATCTGCTTCTGCAATGAATCACATGACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAACTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAACGACTGGCCAAGAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGACCCTAAAGTACCAGTTCAGTGCTTTACCCGGAAGGAAAATACTCGGTATTGGAGAAGTTCTATTTACATCGGTAAGGATACAAGAACAGCGTTTCAAAATCCAAGTGGAACCGCGTTTTTCCTTTCTTACAACTTTGATGTTGATGAGGTTTATCTTACTTACAGTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGAATCCTATAGGGCAACTTATACTGCTGCTGTGGCAGAGTTCTACTAAAACTTGGTTGGATCTGGGTACTTCCCCTGGTGATGATAACTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTGAAGGTGAACACCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACGGCCAAGTTTCCGAACCAATCGGCGGTGGGGGATTGGTCCAGTGGCTGCGTTAGGGAAAAGGTGTTGAAATGTGGCAACGGAATACAAGGTAACTTTTCAAAGCTTGAAAAGGTCAAACTTCCGGATCATTCTGTTATGTTGAAGAATAGGAGTACGACCGAGTGTCACTTTGAATGTCAGCAGAACTGTTCTTGCACAGCTTATGCTTATGTAAATGAGACAGATGGAAGTAATATTGGGAAATGTTTGACATGGTCTGGCGAATTACTGGATCTAGTAGATAATCACAGTATTGTTGCACATGATATCTATATTCGTGTCCACGGCTCCCAACTAGGCAAAAAGGAACTTTCTGTTAATTCCTTGAAGTGGATCCTTCCAATTGCAATAGTCTCTGCTGCGGTTGGATTGTTTACAATAACTTTTGGCTATTTATGGAAGAAAAAATTGGGGAGGATGGCAAGAAAATTAAGTGAGAATATAAGGTTGGTTAGTGCAGTGGGTGGGAAGAATGATACAGAATTACCACTCTTCAGTTTAAGGAGTATATTAGCTGCTACAAACAACTTCTCTGGAGCGAATAAACTTGGAGAGGGAGGATTTGGCCCCGTTTATAAGGTGACACTTCTAGAATATGCTCTTAGTGCAAGTACATTCTTCTTCATTTTGGGAATTTTGCCAGAAAATCAGGAAGTGGCCATAAAGAGGCTATCGAAGAACTCTGGGCAAGGACATCATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAACATACCAATCTTGTAAGGCTATTGGGTTGCTGTATGGAAGAAGATGAAATGATATTGATCTATGAGTACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATCAATTTGAAAAGACAAGGTTAGATTGGGATACACGCTTTCGAATTATACAAGGTATTGCTCAAGGATTACTATATATCCACAAGTACTCTAGATTGAAAATCATCCATAGAGATCTAAAAGCAAGTAATGTTCTGTTGGATGGAACAATGAACCCTAAAGTGTCCGACTTTGGAATGGCAAGAATTTTTGATATAAACCAAATTGAAGCAAATACCAAAAAGATTGTTGGGACATATGGCTACATGTCTCCTGAATATGCACTCTATGGTCATTTCTCTGAGAAATTAGATGTATTTAGTTTTGGAGTATTGTTGTTAGAGATTGTAAGTGGAAAAAAAAACGCTTCTTTTTATCACTTTGAAAATTCACTAACGCTTGCTCAATGGATATGGGAATTATGGAAAGAAGGTAGAGGAGCGGAGGTAATTGACGCATCAGTAAGGGAAACATGCTGCATTCATGAAGCTTTGAGGTGTATCCATGTCGGGCTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCCATAATGTCATCGGTGATTCATATGCTTGAGGTCAATGAAGCTACATCACTTCCACCCTCCAAAGAACCTGCTTTTTCAACAAGTAGGAATTCAAGTCCTGTTACCACTTATTCCAAAAATGAAGTCACTATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

835

Amino Acids

93.25

Weight (kDa)

6.73

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 173 7.4e-30 D-mannose binding lectin
S_locus_glycop PF00954 226 - 317 2.5e-16 S-locus glycoprotein domain
PAN_2 PF08276 345 - 407 1.6e-14 PAN-like domain
PK_Tyr_Ser-Thr PF07714 509 - 792 7.2e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 543 - 723 2.6e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1560
Acc36I ACCTGC 2 cut(s) 71, 2428
AccB1I GGYRCC 1 cut(s) 504
AccB7I CCANNNNNTGG 1 cut(s) 112
AccBSI CCGCTC 1 cut(s) 2246
AccI GTMKAC 1 cut(s) 187
AccII CGCG 1 cut(s) 680
AccIII TCCGGA 1 cut(s) 1066
AciI CCGC 6 cut(s) 276, 678, 876, 968, 1346, 2246
AclWI GGATC 7 cut(s) 309, 527, 834, 1077, 1224, 1312, 1325
AcoI YGGCCR 3 cut(s) 493, 945, 1641
AcsI RAATTY 6 cut(s) 163, 1617, 1814, 2010, 2191, 2440
AcuI CTGAAG 1 cut(s) 1462
AcyI GRCGYC 1 cut(s) 505
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 8 cut(s) 61, 81, 576, 835, 1099, 1597, 1790, 1913
AfeI AGCGCT 1 cut(s) 525
AfiI CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1650
AflIII ACRYGT 2 cut(s) 1791, 2070
AhdI GACNNNNNGTC 1 cut(s) 1107
AjnI CCWGG 4 cut(s) 82, 460, 515, 841
AjuI GAANNNNNNNTTGG 4 cut(s) 1376, 1408, 1415, 1447
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
Alw26I GTCTC 4 cut(s) 739, 1157, 1342, 2079
AlwI GGATC 7 cut(s) 309, 527, 834, 1077, 1224, 1312, 1325
AlwNI CAGNNNCTG 1 cut(s) 990
Aor13HI TCCGGA 1 cut(s) 1066
Aor51HI AGCGCT 1 cut(s) 525
AoxI GGCC 4 cut(s) 493, 945, 1549, 1641
ApeKI GCWGC 6 cut(s) 521, 793, 990, 1343, 1499, 2280
ApoI RAATTY 6 cut(s) 163, 1617, 1814, 2010, 2191, 2440
ArsI GACNNNNNNTTYG 2 cut(s) 2460, 2492
AspLEI GCGC 2 cut(s) 507, 526
AspS9I GGNCC 4 cut(s) 129, 878, 981, 1550
AsuC2I CCSGG 3 cut(s) 258, 543, 595
AsuHPI GGTGA 6 cut(s) 544, 857, 909, 914, 1576, 2377
AsuII TTCGAA 1 cut(s) 1867
AvaII GGWCC 3 cut(s) 129, 878, 981
BalI TGGCCA 2 cut(s) 495, 1643
BamHI GGATCC 1 cut(s) 1317
BanI GGYRCC 1 cut(s) 504
BbvI GCAGC 6 cut(s) 533, 780, 977, 1330, 1486, 2267
BccI CCATC 4 cut(s) 275, 1163, 1396, 1961
BceAI ACGGC 2 cut(s) 960, 1285
BciT130I CCWGG 4 cut(s) 84, 462, 517, 843
BciVI GTATCC 4 cut(s) 376, 637, 1849, 2315
BclI TGATCA 2 cut(s) 270, 1825
BcnI CCSGG 3 cut(s) 258, 543, 595
BcoDI GTCTC 4 cut(s) 739, 1157, 1342, 2079
BfaI CTAG 5 cut(s) 377, 1220, 1280, 1574, 1917
BfmI CTRYAG 1 cut(s) 774
BfoI RGCGCY 2 cut(s) 508, 527
BfuAI ACCTGC 2 cut(s) 71, 2428
BfuI GTATCC 4 cut(s) 376, 637, 1849, 2315
BglII AGATCT 1 cut(s) 1939
BisI GCNGC 6 cut(s) 522, 794, 991, 1344, 1500, 2281
BlsI GCNGC 6 cut(s) 523, 795, 992, 1345, 1501, 2282
BmcAI AGTACT 1 cut(s) 1913
Bme1390I CCNGG 7 cut(s) 84, 258, 462, 517, 543, 595, 843
Bme18I GGWCC 3 cut(s) 129, 878, 981
BmeRI GACNNNNNGTC 1 cut(s) 1107
BmgT120I GGNCC 4 cut(s) 129, 878, 981, 1550
BmiI GGNNCC 7 cut(s) 130, 506, 676, 880, 1273, 1319, 1552
BmrFI CCNGG 7 cut(s) 84, 258, 462, 517, 543, 595, 843
BmsI GCATC 2 cut(s) 344, 2270
BpmI CTGGAG 2 cut(s) 1539, 2322
Bpu14I TTCGAA 1 cut(s) 1867
BpuEI CTTGAG 2 cut(s) 1872, 2399
BpuMI CCSGG 3 cut(s) 258, 543, 595
BsaBI GATNNNNATC 2 cut(s) 285, 1778
BsaHI GRCGYC 1 cut(s) 505
BsaJI CCNNGG 4 cut(s) 181, 516, 841, 1267
BsaWI WCCGGW 2 cut(s) 386, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 2235, 2265
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1650
Bse1I ACTGG 6 cut(s) 373, 496, 578, 940, 984, 1218
Bse3DI GCAATG 2 cut(s) 360, 871
Bse8I GATNNNNATC 2 cut(s) 285, 1778
BseAI TCCGGA 1 cut(s) 1066
BseBI CCWGG 4 cut(s) 84, 462, 517, 843
BseDI CCNNGG 4 cut(s) 181, 516, 841, 1267
BseGI GGATG 7 cut(s) 45, 286, 439, 512, 1407, 1929, 1972
BseJI GATNNNNATC 2 cut(s) 285, 1778
BseLI CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1650
BseMI GCAATG 2 cut(s) 360, 871
BseMII CTCAG 3 cut(s) 392, 759, 2097
BseNI ACTGG 6 cut(s) 373, 496, 578, 940, 984, 1218
BseRI GAGGAG 1 cut(s) 2256
BseXI GCAGC 6 cut(s) 533, 780, 977, 1330, 1486, 2267
BsgI GTGCAG 1 cut(s) 1461
Bsh1236I CGCG 1 cut(s) 680
Bsh1285I CGRYCG 1 cut(s) 1104
BshFI GGCC 4 cut(s) 495, 947, 1551, 1643
BshNI GGYRCC 1 cut(s) 504
BsiEI CGRYCG 1 cut(s) 1104
BsiSI CCGG 5 cut(s) 257, 387, 543, 595, 1067
BslFI GGGAC 3 cut(s) 142, 864, 2071
BslI CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1650
BsmAI GTCTC 4 cut(s) 739, 1157, 1342, 2079
BsmFI GGGAC 3 cut(s) 142, 864, 2071
BsmI GAATGC 1 cut(s) 2283
BsnI GGCC 4 cut(s) 495, 947, 1551, 1643
Bsp119I TTCGAA 1 cut(s) 1867
Bsp13I TCCGGA 1 cut(s) 1066
BspACI CCGC 6 cut(s) 276, 678, 876, 968, 1346, 2246
BspANI GGCC 4 cut(s) 495, 947, 1551, 1643
BspCNI CTCAG 3 cut(s) 393, 758, 2098
BspEI TCCGGA 1 cut(s) 1066
BspFNI CGCG 1 cut(s) 680
BspHI TCATGA 2 cut(s) 1681, 2287
BspLI GGNNCC 7 cut(s) 130, 506, 676, 880, 1273, 1319, 1552
BspMI ACCTGC 2 cut(s) 71, 2428
BspPI GGATC 7 cut(s) 309, 527, 834, 1077, 1224, 1312, 1325
BspT104I TTCGAA 1 cut(s) 1867
BspT107I GGYRCC 1 cut(s) 504
BsrBI CCGCTC 1 cut(s) 2246
BsrDI GCAATG 2 cut(s) 360, 871
BsrI ACTGG 6 cut(s) 373, 496, 578, 940, 984, 1218
BssECI CCNNGG 4 cut(s) 181, 516, 841, 1267
BssNAI GTATAC 1 cut(s) 188
BssNI GRCGYC 1 cut(s) 505
BssT1I CCWWGG 1 cut(s) 181
Bst1107I GTATAC 1 cut(s) 188
Bst2UI CCWGG 4 cut(s) 84, 462, 517, 843
Bst4CI ACNGT 5 cut(s) 90, 731, 857, 1133, 1235
Bst6I CTCTTC 1 cut(s) 1481
BstACI GRCGYC 1 cut(s) 505
BstBI TTCGAA 1 cut(s) 1867
BstC8I GCNNGC 1 cut(s) 2205
BstDEI CTNAG 4 cut(s) 401, 745, 1586, 2106
BstDSI CCRYGG 1 cut(s) 1267
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 7 cut(s) 45, 286, 439, 512, 1407, 1929, 1972
BstFNI CGCG 1 cut(s) 680
BstH2I RGCGCY 2 cut(s) 508, 527
BstHHI GCGC 2 cut(s) 507, 526
BstMAI GTCTC 4 cut(s) 739, 1157, 1342, 2079
BstMCI CGRYCG 1 cut(s) 1104
BstMWI GCNNNNNNNGC 2 cut(s) 799, 1589
BstNI CCWGG 4 cut(s) 84, 462, 517, 843
BstNSI RCATGY 3 cut(s) 1795, 2074, 2280
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 7 cut(s) 82, 256, 460, 515, 541, 593, 841
BstSFI CTRYAG 1 cut(s) 774
BstUI CGCG 1 cut(s) 680
BstV1I GCAGC 6 cut(s) 533, 780, 977, 1330, 1486, 2267
BstX2I RGATCY 4 cut(s) 826, 1216, 1317, 1939
BstYI RGATCY 4 cut(s) 826, 1216, 1317, 1939
BstZ17I GTATAC 1 cut(s) 188
BsuI GTATCC 4 cut(s) 376, 637, 1849, 2315
BsuRI GGCC 4 cut(s) 495, 947, 1551, 1643
BtgI CCRYGG 1 cut(s) 1267
BtsCI GGATG 7 cut(s) 45, 286, 439, 512, 1407, 1929, 1972
BtsI GCAGTG 2 cut(s) 29, 1449
BtsIMutI CAGTG 5 cut(s) 29, 590, 736, 991, 1449
BveI ACCTGC 2 cut(s) 71, 2428
Cac8I GCNNGC 1 cut(s) 2205
CaiI CAGNNNCTG 1 cut(s) 990
CciI TCATGA 2 cut(s) 1681, 2287
CfoI GCGC 2 cut(s) 507, 526
Cfr13I GGNCC 4 cut(s) 129, 878, 981, 1550
CseI GACGC 1 cut(s) 2267
Csp6I GTAC 8 cut(s) 60, 80, 575, 834, 1098, 1596, 1789, 1912
CviQI GTAC 8 cut(s) 60, 80, 575, 834, 1098, 1596, 1789, 1912
DdeI CTNAG 4 cut(s) 401, 745, 1586, 2106
DinI GGCGCC 1 cut(s) 506
DraIII CACNNNGTG 1 cut(s) 423
DriI GACNNNNNGTC 1 cut(s) 1107
EaeI YGGCCR 3 cut(s) 493, 945, 1641
Eam1104I CTCTTC 1 cut(s) 1481
Eam1105I GACNNNNNGTC 1 cut(s) 1107
EarI CTCTTC 1 cut(s) 1481
Eco130I CCWWGG 1 cut(s) 181
Eco32I GATATC 1 cut(s) 1252
Eco47I GGWCC 3 cut(s) 129, 878, 981
Eco47III AGCGCT 1 cut(s) 525
Eco57I CTGAAG 1 cut(s) 1462
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 2440
EcoRII CCWGG 4 cut(s) 82, 460, 515, 841
EcoRV GATATC 1 cut(s) 1252
EcoT14I CCWWGG 1 cut(s) 181
EcoT22I ATGCAT 1 cut(s) 337
EgeI GGCGCC 1 cut(s) 506
EheI GGCGCC 1 cut(s) 506
ErhI CCWWGG 1 cut(s) 181
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 539, 571
FaqI GGGAC 3 cut(s) 142, 864, 2071
FauI CCCGC 1 cut(s) 269
FauNDI CATATG 2 cut(s) 2062, 2373
FbaI TGATCA 2 cut(s) 270, 1825
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 6 cut(s) 522, 794, 991, 1344, 1500, 2281
FokI GGATG 7 cut(s) 32, 293, 426, 499, 1414, 1916, 1979
Fsp4HI GCNGC 6 cut(s) 522, 794, 991, 1344, 1500, 2281
FspBI CTAG 5 cut(s) 377, 1220, 1280, 1574, 1917
GlaI GCGC 2 cut(s) 506, 525
GluI GCNGC 6 cut(s) 522, 794, 991, 1344, 1500, 2281
GsuI CTGGAG 2 cut(s) 1539, 2322
HaeII RGCGCY 2 cut(s) 508, 527
HaeIII GGCC 4 cut(s) 495, 947, 1551, 1643
HapII CCGG 5 cut(s) 257, 387, 543, 595, 1067
HgaI GACGC 1 cut(s) 2267
HhaI GCGC 2 cut(s) 507, 526
Hin1I GRCGYC 1 cut(s) 505
Hin6I GCGC 2 cut(s) 505, 524
HinP1I GCGC 2 cut(s) 505, 524
HincII GTYRAC 1 cut(s) 327
HindII GTYRAC 1 cut(s) 327
HindIII AAGCTT 2 cut(s) 1046, 2292
HinfI GANTC 6 cut(s) 192, 239, 251, 358, 769, 2368
HpaII CCGG 5 cut(s) 257, 387, 543, 595, 1067
HphI GGTGA 6 cut(s) 544, 857, 909, 914, 1576, 2377
Hpy166II GTNNAC 6 cut(s) 188, 327, 552, 905, 1267, 1359
Hpy188I TCNGA 7 cut(s) 270, 402, 448, 739, 957, 1993, 2107
Hpy8I GTNNAC 6 cut(s) 188, 327, 552, 905, 1267, 1359
HpyAV CCTTC 5 cut(s) 565, 592, 893, 1331, 2228
HpyCH4III ACNGT 5 cut(s) 90, 731, 857, 1133, 1235
HpyF10VI GCNNNNNNNGC 2 cut(s) 799, 1589
HpyF3I CTNAG 4 cut(s) 401, 745, 1586, 2106
Hsp92I GRCGYC 1 cut(s) 505
HspAI GCGC 2 cut(s) 505, 524
KasI GGCGCC 1 cut(s) 504
Kpn2I TCCGGA 1 cut(s) 1066
Ksp22I TGATCA 2 cut(s) 270, 1825
LmnI GCTCC 4 cut(s) 1277, 1520, 2243, 2341
Lsp1109I GCAGC 6 cut(s) 533, 780, 977, 1330, 1486, 2267
LweI GCATC 2 cut(s) 344, 2270
MaeI CTAG 5 cut(s) 377, 1220, 1280, 1574, 1917
MaeIII GTNAC 8 cut(s) 17, 25, 101, 1034, 1109, 1564, 2452, 2476
MbiI CCGCTC 1 cut(s) 2246
MfeI CAATTG 1 cut(s) 1326
MflI RGATCY 4 cut(s) 826, 1216, 1317, 1939
MlsI TGGCCA 2 cut(s) 495, 1643
MluNI TGGCCA 2 cut(s) 495, 1643
Mly113I GGCGCC 1 cut(s) 505
MmeI TCCRAC 6 cut(s) 279, 804, 1330, 1744, 1944, 2016
Mox20I TGGCCA 2 cut(s) 495, 1643
Mph1103I ATGCAT 1 cut(s) 337
MroI TCCGGA 1 cut(s) 1066
MscI TGGCCA 2 cut(s) 495, 1643
MseI TTAA 4 cut(s) 468, 1302, 1415, 1484
MslI CAYNNNNRTG 3 cut(s) 220, 919, 925
Msp20I TGGCCA 2 cut(s) 495, 1643
MspA1I CMGCKG 2 cut(s) 276, 2342
MspI CCGG 5 cut(s) 257, 387, 543, 595, 1067
MspR9I CCNGG 7 cut(s) 84, 258, 462, 517, 543, 595, 843
MunI CAATTG 1 cut(s) 1326
Mva1269I GAATGC 1 cut(s) 2283
MvaI CCWGG 4 cut(s) 84, 462, 517, 843
MvnI CGCG 1 cut(s) 680
MwoI GCNNNNNNNGC 2 cut(s) 799, 1589
NarI GGCGCC 1 cut(s) 505
NciI CCSGG 3 cut(s) 258, 543, 595
NdeI CATATG 2 cut(s) 2062, 2373
NlaIV GGNNCC 7 cut(s) 130, 506, 676, 880, 1273, 1319, 1552
NmuCI GTSAC 3 cut(s) 1109, 1564, 2476
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 3 cut(s) 1795, 2074, 2280
NspV TTCGAA 1 cut(s) 1867
PagI TCATGA 2 cut(s) 1681, 2287
PciI ACATGT 2 cut(s) 1791, 2070
PctI GAATGC 1 cut(s) 2283
PfeI GAWTC 6 cut(s) 192, 239, 251, 358, 769, 2368
PflFI GACNNNGTC 1 cut(s) 1198
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 6 cut(s) 523, 795, 992, 1345, 1501, 2282
PluTI GGCGCC 1 cut(s) 508
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 2 cut(s) 1791, 2070
PsiI TTATAA 1 cut(s) 1560
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 4 cut(s) 82, 460, 515, 841
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 4 cut(s) 82, 460, 515, 841
PspN4I GGNNCC 7 cut(s) 130, 506, 676, 880, 1273, 1319, 1552
PspPI GGNCC 4 cut(s) 129, 878, 981, 1550
PspPPI RGGWCCY 1 cut(s) 129
PstNI CAGNNNCTG 1 cut(s) 990
PsuI RGATCY 4 cut(s) 826, 1216, 1317, 1939
PsyI GACNNNGTC 1 cut(s) 1198
PvuII CAGCTG 1 cut(s) 2342
RsaI GTAC 8 cut(s) 61, 81, 576, 835, 1099, 1597, 1790, 1913
RsaNI GTAC 8 cut(s) 60, 80, 575, 834, 1098, 1596, 1789, 1912
RseI CAYNNNNRTG 3 cut(s) 220, 919, 925
SaqAI TTAA 4 cut(s) 468, 1302, 1415, 1484
SatI GCNGC 6 cut(s) 522, 794, 991, 1344, 1500, 2281
Sau96I GGNCC 4 cut(s) 129, 878, 981, 1550
ScaI AGTACT 1 cut(s) 1913
ScrFI CCNGG 7 cut(s) 84, 258, 462, 517, 543, 595, 843
SfaNI GCATC 2 cut(s) 344, 2270
SfcI CTRYAG 1 cut(s) 774
SfoI GGCGCC 1 cut(s) 506
SfuI TTCGAA 1 cut(s) 1867
SinI GGWCC 3 cut(s) 129, 878, 981
SmiMI CAYNNNNRTG 3 cut(s) 220, 919, 925
SmlI CTYRAG 2 cut(s) 1887, 2378
SmoI CTYRAG 2 cut(s) 1887, 2378
SsiI CCGC 6 cut(s) 276, 678, 876, 968, 1346, 2246
SspDI GGCGCC 1 cut(s) 504
SspI AATATT 1 cut(s) 1180
SspMI CTAG 5 cut(s) 377, 1220, 1280, 1574, 1917
StyD4I CCNGG 7 cut(s) 82, 256, 460, 515, 541, 593, 841
StyI CCWWGG 1 cut(s) 181
TaaI ACNGT 5 cut(s) 90, 731, 857, 1133, 1235
TaqI TCGA 6 cut(s) 435, 1658, 1801, 1867, 2347, 2500
TaqII GACCGA 1 cut(s) 1118
TatI WGTACW 3 cut(s) 1595, 1788, 1911
TfiI GAWTC 6 cut(s) 192, 239, 251, 358, 769, 2368
Tru1I TTAA 4 cut(s) 468, 1302, 1415, 1484
Tru9I TTAA 4 cut(s) 468, 1302, 1415, 1484
TscAI CASTG 5 cut(s) 36, 590, 736, 991, 1449
TseFI GTSAC 3 cut(s) 1109, 1564, 2476
TseI GCWGC 6 cut(s) 521, 793, 990, 1343, 1499, 2280
Tsp45I GTSAC 3 cut(s) 1109, 1564, 2476
TspGWI ACGGA 1 cut(s) 1038
TspRI CASTG 5 cut(s) 36, 590, 736, 991, 1449
Tth111I GACNNNGTC 1 cut(s) 1198
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 3 cut(s) 129, 878, 981
XapI RAATTY 6 cut(s) 163, 1617, 1814, 2010, 2191, 2440
XbaI TCTAGA 2 cut(s) 1573, 1916
XceI RCATGY 3 cut(s) 1795, 2074, 2280
XmiI GTMKAC 1 cut(s) 187
XspI CTAG 5 cut(s) 377, 1220, 1280, 1574, 1917
ZrmI AGTACT 1 cut(s) 1913
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.