Rh1CG091400

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000114
Physical Location & Seq
Reverse (-)
19491329 .. 19519416
28088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG091400.1

Sequence Viewer

Length: 1749 bp
ATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAACTCACTTTGTGGCAGAGCTTCGATCATCCCTGTGATACTATGTTGCCTGGCATGAAAATTAGCTTGAACAAAAAGACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCTGGAAAGTTCACCTTGGGCATAGATCCTAAAGTACTAGCTCAGGCCTTTATCTGGAAGGAAACTACTCCAATAGAAAGAAGTCCTCTGTACATTGGCAAGGATATAAGAACAGCATTTCAAAATCCAGGTGGAACCGCGTTTTTCCTTTCATACAACTTTGATGTTGATGATGTTTATCTTACTTACATTGTCTCGGATAGCTTAGTAAAATTGAGGGTCTGGTTGGATCCTACAGGGCTAGTTAAATTGCAGTTCTGGCAGAATTCTAGTAAAACGTGGTTGGAACAAGGGAGTTCACCGCCCGTTCATAACTGTGATTTTTATGCTTATTGCGGTCCCAATAGTGCTTGTCGTAGTGGTGAACCCCTGTCATCACCATGCAAGTGTTTGATTGGTTTTACAGCCAAGTTTTTGAACCAATCGGCAGTGGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTAACTTTTCAAAGCTTGAAGAGGTGAAACTGCCGGATCATTCTGTACTGTTAAACAATAGGAGTATGAACGAGTGTGAATCTGAATGTCAGCGGAACTGTTCTTGCACAGCTTATGCTTATGTAAATGCGACAGATAGAAGTAATATTGGGACATGCTTGGCATGGTTTGGCAAATTACTGGATCTAGTAGAGAATTTCAACAACTCTAGACATGATATCTATATTCGTGTTCATGGCTCCGAACTAGAGGAAGATCGTAGATTGAAGGTTTTCAAGAAGGAGTGGTTTGAAGGCAAGGACTGTCTTGACATTGGCTGCTATTCTGGGGTTATCACTATACAAATCGTTGGATTTCATCGCTACATTCTTGAAAATTTCACCGGTGACACTTTGGAGGGTGTGACTGTACGGGAAGTGGAGCAGCAGTTTGATCCAAAATTTGATGAGGCTCGAGCAGTAGTAGAAGGCCAGATCATGTCTTTGCGAGGTCATGCAGAAAGATATGGAGTGCCTTCTCCTCCAAAACGATTGATAGCAACTAGTAGTTCATCAGTGAATCGTGCCTTCCTGTACATTGCAGCGTGTGTATTTGGATGCGAGTTGTACACAGTTCGTAGATCTGATTCAGTTTCTCTTGGAGCTGCATTGAGGGCTGTTCATGGTTGGCTATGCAACGCAAAAGCAAATTCTACTCGTAGAAGAAAACAACCAGAACAGCCATCACACAACTGGACCCCTCGTGAAGATGTGGCTCTAGTTGAGGCGCTAACAGAGATATGTGTTGGTGGCTATTGGAAGGTTGACAATGGCTTCAGGTCTGGGTACTTGGGTAAACTTGAACAGAATATAGAGCAAAAGCTACCAAGCTGTGGGCTTAAGGCAAACCCCCACATTGAGTCTCATTTGAAGACATTGAAGAAACAAACACTTGCCATCTACGACATGCTTTCTAACTCAAGTGGGTTCTCATGGAACCATGAAGAAAAAATGGTGGTGTGTGAAAAACAAGTGTTTGATGATTGGGTTAAAGTAAGTTGTCTTGAAGTTATATGCAGATTCTTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

582

Amino Acids

65.62

Weight (kDa)

6.38

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 3 - 55 1.5e-16 D-mannose binding lectin
S_locus_glycop PF00954 116 - 199 2.5e-15 S-locus glycoprotein domain
PAN_2 PF08276 227 - 289 3.7e-14 PAN-like domain
FGGY_C PF02782 340 - 448 8.6e-09 FGGY family of carbohydrate kinases, C-terminal domain
Myb_DNA-bind_3 PF12776 470 - 566 7.7e-07 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 150
AccB7I CCANNNNNTGG 2 cut(s) 188, 1550
AccII CGCG 1 cut(s) 326
AciI CCGC 4 cut(s) 324, 488, 522, 772
AclWI GGATC 7 cut(s) 173, 206, 410, 423, 723, 870, 1106
AcoI YGGCCR 1 cut(s) 139
AcsI RAATTY 5 cut(s) 451, 874, 1054, 1118, 1366
AcuI CTGAAG 1 cut(s) 1477
AcyI GRCGYC 1 cut(s) 151
AdeI CACNNNGTG 1 cut(s) 69
AfaI GTAC 7 cut(s) 222, 278, 726, 1089, 1253, 1286, 1505
AfiI CCNNNNNNNGG 3 cut(s) 188, 240, 1550
AflII CTTAAG 1 cut(s) 1556
AflIII ACRYGT 1 cut(s) 659
AgeI ACCGGT 1 cut(s) 1061
AhlI ACTAGT 1 cut(s) 1220
AjnI CCWGG 4 cut(s) 106, 161, 187, 313
AloI GAACNNNNNNTCC 2 cut(s) 27, 59
Alw26I GTCTC 2 cut(s) 385, 1584
AlwI GGATC 7 cut(s) 173, 206, 410, 423, 723, 870, 1106
AlwNI CAGNNNCTG 1 cut(s) 636
Ama87I CYCGRG 1 cut(s) 1131
AoxI GGCC 3 cut(s) 139, 231, 1147
ApeKI GCWGC 6 cut(s) 167, 636, 996, 1102, 1259, 1322
ApoI RAATTY 5 cut(s) 451, 874, 1054, 1118, 1366
AsiGI ACCGGT 1 cut(s) 1061
Asp700I GAANNNNTTC 1 cut(s) 950
AspLEI GCGC 3 cut(s) 153, 172, 1447
AspS9I GGNCC 3 cut(s) 524, 627, 1413
AsuHPI GGTGA 7 cut(s) 190, 477, 555, 560, 715, 1051, 1076
AvaI CYCGRG 1 cut(s) 1131
AvaII GGWCC 3 cut(s) 524, 627, 1413
BaeI ACNNNNGTAYC 2 cut(s) 1495, 1528
BalI TGGCCA 1 cut(s) 141
BamHI GGATCC 1 cut(s) 415
BanI GGYRCC 1 cut(s) 150
BauI CACGAG 1 cut(s) 1419
BbsI GAAGAC 1 cut(s) 1595
BbvI GCAGC 6 cut(s) 154, 623, 983, 1114, 1271, 1309
BccI CCATC 2 cut(s) 1408, 1622
BceAI ACGGC 1 cut(s) 685
BciT130I CCWGG 4 cut(s) 108, 163, 189, 315
BciVI GTATCC 1 cut(s) 22
BcoDI GTCTC 2 cut(s) 385, 1584
BcuI ACTAGT 1 cut(s) 1220
BfaI CTAG 9 cut(s) 23, 224, 428, 456, 866, 888, 926, 1221, 1436
BfmI CTRYAG 1 cut(s) 420
BfoI RGCGCY 2 cut(s) 154, 1448
BfrI CTTAAG 1 cut(s) 1556
BfuI GTATCC 1 cut(s) 22
BglII AGATCT 1 cut(s) 1298
BisI GCNGC 6 cut(s) 168, 637, 997, 1103, 1260, 1323
BlsI GCNGC 6 cut(s) 169, 638, 998, 1104, 1261, 1324
BmcAI AGTACT 1 cut(s) 222
Bme1390I CCNGG 4 cut(s) 108, 163, 189, 315
Bme18I GGWCC 3 cut(s) 524, 627, 1413
BmeT110I CYCGRG 1 cut(s) 1131
BmgT120I GGNCC 3 cut(s) 524, 627, 1413
BmiI GGNNCC 7 cut(s) 152, 322, 417, 526, 919, 1415, 1655
BmrFI CCNGG 4 cut(s) 108, 163, 189, 315
BmsI GCATC 1 cut(s) 1265
BpiI GAAGAC 1 cut(s) 1595
Bpu10I CCTNAGC 1 cut(s) 228
BpuEI CTTGAG 1 cut(s) 1621
BsaBI GATNNNNATC 1 cut(s) 363
BsaHI GRCGYC 1 cut(s) 151
BsaJI CCNNGG 2 cut(s) 162, 201
BsaWI WCCGGW 2 cut(s) 32, 1061
BsaXI ACNNNNNCTCC 2 cut(s) 1091, 1121
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 240, 1550
Bse118I RCCGGY 1 cut(s) 1061
Bse1I ACTGG 5 cut(s) 19, 142, 630, 864, 1415
Bse3DI GCAATG 1 cut(s) 1254
Bse8I GATNNNNATC 1 cut(s) 363
BseBI CCWGG 4 cut(s) 108, 163, 189, 315
BseDI CCNNGG 2 cut(s) 162, 201
BseGI GGATG 3 cut(s) 85, 158, 1280
BseJI GATNNNNATC 1 cut(s) 363
BseLI CCNNNNNNNGG 3 cut(s) 188, 240, 1550
BseMI GCAATG 1 cut(s) 1254
BseMII CTCAG 2 cut(s) 38, 242
BseNI ACTGG 5 cut(s) 19, 142, 630, 864, 1415
BseRI GAGGAG 1 cut(s) 1188
BseXI GCAGC 6 cut(s) 154, 623, 983, 1114, 1271, 1309
Bsh1236I CGCG 1 cut(s) 326
BshFI GGCC 3 cut(s) 141, 233, 1149
BshNI GGYRCC 1 cut(s) 150
BshTI ACCGGT 1 cut(s) 1061
BsiHKCI CYCGRG 1 cut(s) 1131
BsiSI CCGG 3 cut(s) 33, 713, 1062
BslFI GGGAC 2 cut(s) 510, 844
BslI CCNNNNNNNGG 3 cut(s) 188, 240, 1550
BsmAI GTCTC 2 cut(s) 385, 1584
BsmFI GGGAC 2 cut(s) 510, 844
BsnI GGCC 3 cut(s) 141, 233, 1149
BsoBI CYCGRG 1 cut(s) 1131
Bsp1407I TGTACA 3 cut(s) 276, 1251, 1284
BspACI CCGC 4 cut(s) 324, 488, 522, 772
BspANI GGCC 3 cut(s) 141, 233, 1149
BspCNI CTCAG 2 cut(s) 39, 241
BspFNI CGCG 1 cut(s) 326
BspLI GGNNCC 7 cut(s) 152, 322, 417, 526, 919, 1415, 1655
BspPI GGATC 7 cut(s) 173, 206, 410, 423, 723, 870, 1106
BspT107I GGYRCC 1 cut(s) 150
BspTI CTTAAG 1 cut(s) 1556
BsrDI GCAATG 1 cut(s) 1254
BsrFI RCCGGY 1 cut(s) 1061
BsrGI TGTACA 3 cut(s) 276, 1251, 1284
BsrI ACTGG 5 cut(s) 19, 142, 630, 864, 1415
BssAI RCCGGY 1 cut(s) 1061
BssECI CCNNGG 2 cut(s) 162, 201
BssNI GRCGYC 1 cut(s) 151
BssSI CACGAG 1 cut(s) 1419
BssT1I CCWWGG 1 cut(s) 201
Bst2BI CACGAG 1 cut(s) 1419
Bst2UI CCWGG 4 cut(s) 108, 163, 189, 315
Bst4CI ACNGT 6 cut(s) 503, 729, 779, 983, 1087, 1291
Bst6I CTCTTC 1 cut(s) 693
BstACI GRCGYC 1 cut(s) 151
BstAFI CTTAAG 1 cut(s) 1556
BstAUI TGTACA 3 cut(s) 276, 1251, 1284
BstDEI CTNAG 3 cut(s) 47, 228, 391
BstF5I GGATG 3 cut(s) 85, 158, 1280
BstFNI CGCG 1 cut(s) 326
BstH2I RGCGCY 2 cut(s) 154, 1448
BstHHI GCGC 3 cut(s) 153, 172, 1447
BstMAI GTCTC 2 cut(s) 385, 1584
BstMWI GCNNNNNNNGC 2 cut(s) 445, 1331
BstNI CCWGG 4 cut(s) 108, 163, 189, 315
BstNSI RCATGY 3 cut(s) 663, 837, 1627
BstSCI CCNGG 4 cut(s) 106, 161, 187, 313
BstSFI CTRYAG 1 cut(s) 420
BstUI CGCG 1 cut(s) 326
BstV1I GCAGC 6 cut(s) 154, 623, 983, 1114, 1271, 1309
BstV2I GAAGAC 1 cut(s) 1595
BstX2I RGATCY 4 cut(s) 211, 415, 862, 1298
BstYI RGATCY 4 cut(s) 211, 415, 862, 1298
BsuI GTATCC 1 cut(s) 22
BsuRI GGCC 3 cut(s) 141, 233, 1149
BtgZI GCGATG 1 cut(s) 1022
BtsCI GGATG 3 cut(s) 85, 158, 1280
BtsI GCAGTG 1 cut(s) 621
BtsIMutI CAGTG 3 cut(s) 621, 637, 1239
CaiI CAGNNNCTG 1 cut(s) 636
CfoI GCGC 3 cut(s) 153, 172, 1447
Cfr10I RCCGGY 1 cut(s) 1061
Cfr13I GGNCC 3 cut(s) 524, 627, 1413
Csp6I GTAC 7 cut(s) 221, 277, 725, 1088, 1252, 1285, 1504
CspAI ACCGGT 1 cut(s) 1061
CviQI GTAC 7 cut(s) 221, 277, 725, 1088, 1252, 1285, 1504
DdeI CTNAG 3 cut(s) 47, 228, 391
DinI GGCGCC 1 cut(s) 152
DraIII CACNNNGTG 1 cut(s) 69
EaeI YGGCCR 1 cut(s) 139
Eam1104I CTCTTC 1 cut(s) 693
EarI CTCTTC 1 cut(s) 693
Eco130I CCWWGG 1 cut(s) 201
Eco147I AGGCCT 1 cut(s) 233
Eco32I GATATC 1 cut(s) 898
Eco47I GGWCC 3 cut(s) 524, 627, 1413
Eco57I CTGAAG 1 cut(s) 1477
Eco88I CYCGRG 1 cut(s) 1131
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 4 cut(s) 106, 161, 187, 313
EcoRV GATATC 1 cut(s) 898
EcoT14I CCWWGG 1 cut(s) 201
EgeI GGCGCC 1 cut(s) 152
EheI GGCGCC 1 cut(s) 152
ErhI CCWWGG 1 cut(s) 201
FalI AAGNNNNNCTT 2 cut(s) 185, 217
FaqI GGGAC 2 cut(s) 510, 844
Fnu4HI GCNGC 6 cut(s) 168, 637, 997, 1103, 1260, 1323
FokI GGATG 3 cut(s) 72, 145, 1287
Fsp4HI GCNGC 6 cut(s) 168, 637, 997, 1103, 1260, 1323
FspBI CTAG 9 cut(s) 23, 224, 428, 456, 866, 888, 926, 1221, 1436
GlaI GCGC 3 cut(s) 152, 171, 1446
GluI GCNGC 6 cut(s) 168, 637, 997, 1103, 1260, 1323
HaeII RGCGCY 2 cut(s) 154, 1448
HaeIII GGCC 3 cut(s) 141, 233, 1149
HapII CCGG 3 cut(s) 33, 713, 1062
HhaI GCGC 3 cut(s) 153, 172, 1447
Hin1I GRCGYC 1 cut(s) 151
Hin6I GCGC 3 cut(s) 151, 170, 1445
HinP1I GCGC 3 cut(s) 151, 170, 1445
HincII GTYRAC 2 cut(s) 657, 1483
HindII GTYRAC 2 cut(s) 657, 1483
HindIII AAGCTT 1 cut(s) 692
HinfI GANTC 6 cut(s) 4, 758, 1237, 1304, 1577, 1737
HpaII CCGG 3 cut(s) 33, 713, 1062
HphI GGTGA 7 cut(s) 190, 477, 555, 560, 715, 1051, 1076
Hpy166II GTNNAC 7 cut(s) 198, 485, 551, 657, 1287, 1483, 1514
Hpy188I TCNGA 5 cut(s) 48, 385, 763, 922, 1303
Hpy188III TCNNGA 7 cut(s) 241, 888, 955, 986, 1049, 1421, 1721
Hpy8I GTNNAC 7 cut(s) 198, 485, 551, 657, 1287, 1483, 1514
HpyAV CCTTC 8 cut(s) 238, 940, 952, 965, 1139, 1203, 1255, 1471
HpyCH4III ACNGT 6 cut(s) 503, 729, 779, 983, 1087, 1291
HpyCH4IV ACGT 1 cut(s) 464
HpyCH4V TGCA 9 cut(s) 439, 570, 639, 786, 1175, 1259, 1325, 1353, 1734
HpyF10VI GCNNNNNNNGC 2 cut(s) 445, 1331
HpyF3I CTNAG 3 cut(s) 47, 228, 391
HpySE526I ACGT 1 cut(s) 464
Hsp92I GRCGYC 1 cut(s) 151
HspAI GCGC 3 cut(s) 151, 170, 1445
KasI GGCGCC 1 cut(s) 150
LmnI GCTCC 3 cut(s) 923, 1099, 1319
Lsp1109I GCAGC 6 cut(s) 154, 623, 983, 1114, 1271, 1309
LweI GCATC 1 cut(s) 1265
MaeI CTAG 9 cut(s) 23, 224, 428, 456, 866, 888, 926, 1221, 1436
MaeII ACGT 1 cut(s) 464
MaeIII GTNAC 4 cut(s) 665, 680, 1064, 1081
MboII GAAGA 8 cut(s) 68, 710, 944, 1392, 1436, 1600, 1609, 1673
MflI RGATCY 4 cut(s) 211, 415, 862, 1298
MlsI TGGCCA 1 cut(s) 141
MluCI AATT 9 cut(s) 117, 398, 434, 451, 854, 874, 1054, 1118, 1366
MluNI TGGCCA 1 cut(s) 141
Mly113I GGCGCC 1 cut(s) 151
MlyI GAGTC 1 cut(s) 1586
MmeI TCCRAC 3 cut(s) 393, 450, 1009
Mox20I TGGCCA 1 cut(s) 141
MroXI GAANNNNTTC 1 cut(s) 950
MscI TGGCCA 1 cut(s) 141
MseI TTAA 4 cut(s) 432, 731, 1557, 1707
MslI CAYNNNNRTG 4 cut(s) 90, 501, 565, 571
Msp20I TGGCCA 1 cut(s) 141
MspA1I CMGCKG 1 cut(s) 772
MspCI CTTAAG 1 cut(s) 1556
MspI CCGG 3 cut(s) 33, 713, 1062
MspR9I CCNGG 4 cut(s) 108, 163, 189, 315
MvaI CCWGG 4 cut(s) 108, 163, 189, 315
MvnI CGCG 1 cut(s) 326
MwoI GCNNNNNNNGC 2 cut(s) 445, 1331
NarI GGCGCC 1 cut(s) 151
NlaIV GGNNCC 7 cut(s) 152, 322, 417, 526, 919, 1415, 1655
NmuCI GTSAC 2 cut(s) 1064, 1081
NspI RCATGY 3 cut(s) 663, 837, 1627
PaeR7I CTCGAG 1 cut(s) 1131
PceI AGGCCT 1 cut(s) 233
PciI ACATGT 1 cut(s) 659
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 5 cut(s) 4, 758, 1237, 1304, 1737
PflMI CCANNNNNTGG 2 cut(s) 188, 1550
PinAI ACCGGT 1 cut(s) 1061
PkrI GCNGC 6 cut(s) 169, 638, 998, 1104, 1261, 1324
PleI GAGTC 1 cut(s) 1585
PluTI GGCGCC 1 cut(s) 154
PpsI GAGTC 1 cut(s) 1585
PscI ACATGT 1 cut(s) 659
Psp6I CCWGG 4 cut(s) 106, 161, 187, 313
PspGI CCWGG 4 cut(s) 106, 161, 187, 313
PspN4I GGNNCC 7 cut(s) 152, 322, 417, 526, 919, 1415, 1655
PspPI GGNCC 3 cut(s) 524, 627, 1413
PspXI VCTCGAGB 1 cut(s) 1131
PstNI CAGNNNCTG 1 cut(s) 636
PsuI RGATCY 4 cut(s) 211, 415, 862, 1298
RsaI GTAC 7 cut(s) 222, 278, 726, 1089, 1253, 1286, 1505
RsaNI GTAC 7 cut(s) 221, 277, 725, 1088, 1252, 1285, 1504
RseI CAYNNNNRTG 4 cut(s) 90, 501, 565, 571
SaqAI TTAA 4 cut(s) 432, 731, 1557, 1707
SatI GCNGC 6 cut(s) 168, 637, 997, 1103, 1260, 1323
Sau96I GGNCC 3 cut(s) 524, 627, 1413
ScaI AGTACT 1 cut(s) 222
SchI GAGTC 1 cut(s) 1586
ScrFI CCNGG 4 cut(s) 108, 163, 189, 315
SfaNI GCATC 1 cut(s) 1265
SfcI CTRYAG 1 cut(s) 420
SfoI GGCGCC 1 cut(s) 152
Sfr274I CTCGAG 1 cut(s) 1131
SgrAI CRCCGGYG 1 cut(s) 1061
SinI GGWCC 3 cut(s) 524, 627, 1413
SlaI CTCGAG 1 cut(s) 1131
SmiMI CAYNNNNRTG 4 cut(s) 90, 501, 565, 571
SmlI CTYRAG 3 cut(s) 1131, 1556, 1636
SmoI CTYRAG 3 cut(s) 1131, 1556, 1636
SpeI ACTAGT 1 cut(s) 1220
Sse9I AATT 9 cut(s) 117, 398, 434, 451, 854, 874, 1054, 1118, 1366
SseBI AGGCCT 1 cut(s) 233
SsiI CCGC 4 cut(s) 324, 488, 522, 772
SspDI GGCGCC 1 cut(s) 150
SspI AATATT 1 cut(s) 826
SspMI CTAG 9 cut(s) 23, 224, 428, 456, 866, 888, 926, 1221, 1436
StuI AGGCCT 1 cut(s) 233
StyD4I CCNGG 4 cut(s) 106, 161, 187, 313
StyI CCWWGG 1 cut(s) 201
TaaI ACNGT 6 cut(s) 503, 729, 779, 983, 1087, 1291
TaiI ACGT 1 cut(s) 467
TaqI TCGA 2 cut(s) 81, 1132
TasI AATT 9 cut(s) 117, 398, 434, 451, 854, 874, 1054, 1118, 1366
TatI WGTACW 5 cut(s) 220, 276, 724, 1251, 1284
TfiI GAWTC 5 cut(s) 4, 758, 1237, 1304, 1737
Tru1I TTAA 4 cut(s) 432, 731, 1557, 1707
Tru9I TTAA 4 cut(s) 432, 731, 1557, 1707
TscAI CASTG 3 cut(s) 621, 637, 1239
TseFI GTSAC 2 cut(s) 1064, 1081
TseI GCWGC 6 cut(s) 167, 636, 996, 1102, 1259, 1322
Tsp45I GTSAC 2 cut(s) 1064, 1081
TspRI CASTG 3 cut(s) 621, 637, 1239
Van91I CCANNNNNTGG 2 cut(s) 188, 1550
Vha464I CTTAAG 1 cut(s) 1556
VpaK11BI GGWCC 3 cut(s) 524, 627, 1413
XapI RAATTY 5 cut(s) 451, 874, 1054, 1118, 1366
XbaI TCTAGA 1 cut(s) 887
XceI RCATGY 3 cut(s) 663, 837, 1627
XcmI CCANNNNNNNNNTGG 1 cut(s) 1407
XhoI CTCGAG 1 cut(s) 1131
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 9 cut(s) 23, 224, 428, 456, 866, 888, 926, 1221, 1436
ZrmI AGTACT 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.