Prupe.1G497000_v2.0.a1

receptor-like protein kinase At1g67000

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000114
Physical Location & Seq
Reverse (-)
41182898 .. 41184437
1540 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G497000.1

Sequence Viewer

Length: 864 bp
ATGGATAGGATTAACTGCAGCGAAGCTATTAACTGCGGTGGCATCGGAGGCATCTCGTACCCCTTTTGGGGAGTAAACCGAGCTAATTACTGTGGTCTGCCCGGGTTCGAGGTCCAATGCCACAACAATGTCCCCGTGATCAACATGTCGAATATCAACTATAGAATTCTTAAAACCAACTCCAGTAGGGTTCCTCCGTCTGTTACAGTTGCTAGGCAGGACTATTGGAAAACTATTTGTCCTCCTACTTTTGTTAATACCAGCATCAACTTCTCTCTGTTTAATTACACTTCCTCTGGGGTTACAAACCTGACCTTTTACTACGGGTGCAATACAAGTACAAGTAACACTACTTCTACTTCCCAAGTTTGCAGCAGTGGAAACAAAATTTCATATGTGACACCACTCTTTCTGTCTAATTATAATTCCTCTGCGTTAACAAAGGGGTCCGTTTCCCAGTGCAATAGCACAACAACTAGTTCCCAAATTTGCATTAGAGCCAGCGCTAATATGACTGTTTCGTCTGTCACACCAAGTCCCCCAGCTGATACAGTTGCTCCCGTCGCCTGTAAAAATCAGGTCATTGTTCCGGTTTCTAGAACAGCTGCTGTGGCTCTAAAGGCCAACCGAACAGCTATCCAAGACGCAGTAGATGGGGGCTTTGAATTGGAATTGAAAGTCGGTACTGATATATGCAACACTTGCGTGGAATCAGGAGGGATGTGCGGCACTACTTCTGGTAGCTTCAATTGCTTTTGCAAGGATCGGGCCTATGCAACCAGATGTAATACAACACCTATTTCAAATCAACCACCCAGACCAAAAGGTTCAAAGGCTAAATATGTAATAGGTGCGTATATATGA

Protein Analysis

288

Amino Acids

30.59

Weight (kDa)

8.92

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AasI GACNNNNNNGTC 1 cut(s) 520
AciI CCGC 2 cut(s) 36, 726
AclWI GGATC 1 cut(s) 771
AcsI RAATTY 3 cut(s) 165, 387, 486
AfaI GTAC 3 cut(s) 59, 340, 685
AfeI AGCGCT 1 cut(s) 505
AfiI CCNNNNNNNGG 2 cut(s) 67, 68
AflIII ACRYGT 1 cut(s) 144
AgsI TTSAA 5 cut(s) 665, 676, 748, 804, 831
AhlI ACTAGT 1 cut(s) 476
AleI CACNNNNGTG 1 cut(s) 704
AluBI AGCT 6 cut(s) 26, 83, 545, 605, 635, 744
AluI AGCT 6 cut(s) 26, 83, 545, 605, 635, 744
AlwI GGATC 1 cut(s) 771
AlwNI CAGNNNCTG 1 cut(s) 608
Ama87I CYCGRG 1 cut(s) 101
Aor51HI AGCGCT 1 cut(s) 505
AoxI GGCC 2 cut(s) 621, 768
ApeKI GCWGC 3 cut(s) 18, 372, 605
ApoI RAATTY 3 cut(s) 165, 387, 486
AspLEI GCGC 1 cut(s) 506
AspS9I GGNCC 3 cut(s) 112, 447, 768
AsuC2I CCSGG 2 cut(s) 102, 103
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 2 cut(s) 112, 447
BarI GAAGNNNNNNTAC 2 cut(s) 337, 369
BbvI GCAGC 3 cut(s) 30, 384, 592
BccI CCATC 1 cut(s) 647
BclI TGATCA 1 cut(s) 138
BcnI CCSGG 2 cut(s) 102, 103
BcuI ACTAGT 1 cut(s) 476
BfaI CTAG 3 cut(s) 213, 477, 597
BfmI CTRYAG 2 cut(s) 16, 160
BfoI RGCGCY 1 cut(s) 507
BisI GCNGC 4 cut(s) 19, 373, 606, 727
BlsI GCNGC 4 cut(s) 20, 374, 607, 728
Bme1390I CCNGG 2 cut(s) 102, 103
Bme18I GGWCC 2 cut(s) 112, 447
BmeT110I CYCGRG 1 cut(s) 101
BmgT120I GGNCC 3 cut(s) 112, 447, 768
BmiI GGNNCC 2 cut(s) 192, 448
BmrFI CCNGG 2 cut(s) 102, 103
BmrI ACTGGG 1 cut(s) 451
BmsI GCATC 3 cut(s) 51, 60, 273
BmuI ACTGGG 1 cut(s) 451
BpmI CTGGAG 1 cut(s) 166
BpuMI CCSGG 2 cut(s) 102, 103
BsaJI CCNNGG 1 cut(s) 101
BsaWI WCCGGW 1 cut(s) 589
BsaXI ACNNNNNCTCC 2 cut(s) 541, 571
Bsc4I CCNNNNNNNGG 2 cut(s) 67, 68
Bse1I ACTGG 2 cut(s) 183, 457
BseDI CCNNGG 1 cut(s) 101
BseGI GGATG 1 cut(s) 726
BseLI CCNNNNNNNGG 2 cut(s) 67, 68
BseNI ACTGG 2 cut(s) 183, 457
BseXI GCAGC 3 cut(s) 30, 384, 592
BseYI CCCAGC 1 cut(s) 541
BshFI GGCC 2 cut(s) 623, 770
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 2 cut(s) 102, 590
BslFI GGGAC 2 cut(s) 116, 522
BslI CCNNNNNNNGG 2 cut(s) 67, 68
BsmFI GGGAC 2 cut(s) 116, 522
BsnI GGCC 2 cut(s) 623, 770
BsoBI CYCGRG 1 cut(s) 101
Bsp143I GATC 2 cut(s) 138, 763
BspACI CCGC 2 cut(s) 36, 726
BspANI GGCC 2 cut(s) 623, 770
BspLI GGNNCC 2 cut(s) 192, 448
BspMAI CTGCAG 1 cut(s) 20
BspPI GGATC 1 cut(s) 771
BsrI ACTGG 2 cut(s) 183, 457
BssECI CCNNGG 1 cut(s) 101
BssMI GATC 2 cut(s) 138, 763
Bst4CI ACNGT 4 cut(s) 92, 208, 517, 553
BstAPI GCANNNNNTGC 1 cut(s) 702
BstC8I GCNNGC 1 cut(s) 502
BstF5I GGATG 1 cut(s) 726
BstH2I RGCGCY 1 cut(s) 507
BstHHI GCGC 1 cut(s) 506
BstKTI GATC 2 cut(s) 141, 766
BstMBI GATC 2 cut(s) 138, 763
BstMWI GCNNNNNNNGC 6 cut(s) 48, 563, 611, 620, 702, 750
BstNSI RCATGY 1 cut(s) 148
BstSCI CCNGG 2 cut(s) 100, 101
BstSFI CTRYAG 2 cut(s) 16, 160
BstV1I GCAGC 3 cut(s) 30, 384, 592
BsuRI GGCC 2 cut(s) 623, 770
BtsCI GGATG 1 cut(s) 726
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 2 cut(s) 382, 464
Cac8I GCNNGC 1 cut(s) 502
CaiI CAGNNNCTG 1 cut(s) 608
CfoI GCGC 1 cut(s) 506
Cfr13I GGNCC 3 cut(s) 112, 447, 768
Cfr9I CCCGGG 1 cut(s) 101
CseI GACGC 1 cut(s) 653
Csp6I GTAC 3 cut(s) 58, 339, 684
CviAII CATG 1 cut(s) 145
CviQI GTAC 3 cut(s) 58, 339, 684
DpnI GATC 2 cut(s) 140, 765
DpnII GATC 2 cut(s) 138, 763
DrdI GACNNNNNNGTC 1 cut(s) 520
DseDI GACNNNNNNGTC 1 cut(s) 520
Eco47I GGWCC 2 cut(s) 112, 447
Eco47III AGCGCT 1 cut(s) 505
Eco88I CYCGRG 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 165
FaeI CATG 1 cut(s) 148
FaqI GGGAC 2 cut(s) 116, 522
FatI CATG 1 cut(s) 144
FauNDI CATATG 1 cut(s) 394
FbaI TGATCA 1 cut(s) 138
Fnu4HI GCNGC 4 cut(s) 19, 373, 606, 727
FokI GGATG 1 cut(s) 733
Fsp4HI GCNGC 4 cut(s) 19, 373, 606, 727
FspBI CTAG 3 cut(s) 213, 477, 597
GlaI GCGC 1 cut(s) 505
GluI GCNGC 4 cut(s) 19, 373, 606, 727
GsaI CCCAGC 1 cut(s) 545
GsuI CTGGAG 1 cut(s) 166
HaeII RGCGCY 1 cut(s) 507
HaeIII GGCC 2 cut(s) 623, 770
HapII CCGG 2 cut(s) 102, 590
HgaI GACGC 1 cut(s) 653
HhaI GCGC 1 cut(s) 506
Hin1II CATG 1 cut(s) 148
Hin6I GCGC 1 cut(s) 504
HinP1I GCGC 1 cut(s) 504
HincII GTYRAC 1 cut(s) 438
HindII GTYRAC 1 cut(s) 438
HinfI GANTC 1 cut(s) 710
HpaI GTTAAC 1 cut(s) 438
HpaII CCGG 2 cut(s) 102, 590
Hpy166II GTNNAC 2 cut(s) 76, 438
Hpy188I TCNGA 1 cut(s) 47
Hpy188III TCNNGA 2 cut(s) 597, 714
Hpy8I GTNNAC 2 cut(s) 76, 438
Hpy99I CGWCG 1 cut(s) 566
HpyCH4III ACNGT 4 cut(s) 92, 208, 517, 553
HpyCH4V TGCA 8 cut(s) 18, 330, 372, 462, 492, 696, 759, 776
HpyF10VI GCNNNNNNNGC 6 cut(s) 48, 563, 611, 620, 702, 750
Hsp92II CATG 1 cut(s) 148
HspAI GCGC 1 cut(s) 504
Ksp22I TGATCA 1 cut(s) 138
KspAI GTTAAC 1 cut(s) 438
Kzo9I GATC 2 cut(s) 138, 763
LmnI GCTCC 1 cut(s) 562
Lsp1109I GCAGC 3 cut(s) 30, 384, 592
LweI GCATC 3 cut(s) 51, 60, 273
MaeI CTAG 3 cut(s) 213, 477, 597
MaeIII GTNAC 5 cut(s) 202, 301, 344, 397, 526
MalI GATC 2 cut(s) 140, 765
MboI GATC 2 cut(s) 138, 763
MfeI CAATTG 1 cut(s) 748
MnlI CCTC 7 cut(s) 41, 103, 204, 252, 304, 439, 710
MseI TTAA 6 cut(s) 12, 30, 171, 255, 282, 437
MslI CAYNNNNRTG 2 cut(s) 126, 704
MspA1I CMGCKG 2 cut(s) 545, 605
MspI CCGG 2 cut(s) 102, 590
MspR9I CCNGG 2 cut(s) 102, 103
MunI CAATTG 1 cut(s) 748
MwoI GCNNNNNNNGC 6 cut(s) 48, 563, 611, 620, 702, 750
NciI CCSGG 2 cut(s) 102, 103
NdeI CATATG 1 cut(s) 394
NdeII GATC 2 cut(s) 138, 763
NlaIII CATG 1 cut(s) 148
NlaIV GGNNCC 2 cut(s) 192, 448
NmuCI GTSAC 2 cut(s) 397, 526
NspI RCATGY 1 cut(s) 148
OliI CACNNNNGTG 1 cut(s) 704
PciI ACATGT 1 cut(s) 144
PfeI GAWTC 1 cut(s) 710
PkrI GCNGC 4 cut(s) 20, 374, 607, 728
PscI ACATGT 1 cut(s) 144
PsiI TTATAA 1 cut(s) 423
PspFI CCCAGC 1 cut(s) 541
PspN4I GGNNCC 2 cut(s) 192, 448
PspPI GGNCC 3 cut(s) 112, 447, 768
PstI CTGCAG 1 cut(s) 20
PstNI CAGNNNCTG 1 cut(s) 608
PvuII CAGCTG 2 cut(s) 545, 605
RsaI GTAC 3 cut(s) 59, 340, 685
RsaNI GTAC 3 cut(s) 58, 339, 684
RseI CAYNNNNRTG 2 cut(s) 126, 704
SaqAI TTAA 6 cut(s) 12, 30, 171, 255, 282, 437
SatI GCNGC 4 cut(s) 19, 373, 606, 727
Sau3AI GATC 2 cut(s) 138, 763
Sau96I GGNCC 3 cut(s) 112, 447, 768
ScrFI CCNGG 2 cut(s) 102, 103
SfaNI GCATC 3 cut(s) 51, 60, 273
SfcI CTRYAG 2 cut(s) 16, 160
SinI GGWCC 2 cut(s) 112, 447
SmaI CCCGGG 1 cut(s) 103
SmiMI CAYNNNNRTG 2 cut(s) 126, 704
SpeI ACTAGT 1 cut(s) 476
SsiI CCGC 2 cut(s) 36, 726
SspMI CTAG 3 cut(s) 213, 477, 597
StyD4I CCNGG 2 cut(s) 100, 101
TaaI ACNGT 4 cut(s) 92, 208, 517, 553
TaqI TCGA 2 cut(s) 108, 149
TatI WGTACW 1 cut(s) 338
TauI GCSGC 1 cut(s) 729
TfiI GAWTC 1 cut(s) 710
Tru1I TTAA 6 cut(s) 12, 30, 171, 255, 282, 437
Tru9I TTAA 6 cut(s) 12, 30, 171, 255, 282, 437
TscAI CASTG 2 cut(s) 382, 464
TseFI GTSAC 2 cut(s) 397, 526
TseI GCWGC 3 cut(s) 18, 372, 605
Tsp45I GTSAC 2 cut(s) 397, 526
TspDTI ATGAA 1 cut(s) 381
TspGWI ACGGA 2 cut(s) 186, 439
TspMI CCCGGG 1 cut(s) 101
TspRI CASTG 2 cut(s) 382, 464
VpaK11BI GGWCC 2 cut(s) 112, 447
XapI RAATTY 3 cut(s) 165, 387, 486
XbaI TCTAGA 1 cut(s) 596
XceI RCATGY 1 cut(s) 148
XmaI CCCGGG 1 cut(s) 101
XspI CTAG 3 cut(s) 213, 477, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.