Rh1DG097400

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000114
Physical Location & Seq
Forward (+)
18403556 .. 18407470
3915 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG097400.1

Sequence Viewer

Length: 1608 bp
ATGGGGTGGCTGTTGTGTTACCTTGTAACACTGCTCGTATCTCACATCCTGTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAATATATCAGTGGTAACCAAACTTTGGTTTCTTCCCTTGGGACCTTTACCTTAGGCTTCTTCAATCCTAATGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACACATTCCCAAATACTGCATTAGTATGGGTTGCTAATAGAGAATCTTCACTTGATTCTCCAGGCTTCTTTATGGTCAGCGGGGATGGAAATCTTGTGGTGTTGGATCAAGCTAGAAATCTGGTCTGGTCAACTAATGTATCACTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAACTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAAGAAAACGACTGGCCAAGAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGACCCTAAAGTACCAGTTCAGTGCTTTACCTGGAAGGAAAATACTCGGTATTGGAGAAGTTCTATTTACATCGGTAAGGATACAAGAACAGCATTTCAAAATCCAAGTGGAACTGCTTTTTTCCTTTCTTACAACTTTGATGTTGATGAGGTTTATCTTGCTTTAAGTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGAATCCTACAGGGCAACTTATATTGCTGCTGTGGCAGAGTTCTACTAAAACGTGGTTGGATCTGGGTAATTCCCCTGGTGATGATAACTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTGAACATGAACACCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCAGCGGTGGGGGATTGGTCCAATGGCTGCGTTAGGGAAAAGGTGTTGAAATGTGGTAACGGAATACAAGGAAACTTTCCAAAGCTTGAAAAGGTGAAACTTCCGGATCATTCTGTTATGTTGAAGAACAGGAGTATGAGCGAGTGTCACTTTGAATGTCAGCAGAACTGTTCTTGCACAGCTTATGCTTATGTAAATGAGACATATGGAAGTAATATTGGGAAATGTTTGACATGGTCTGGCGAATTACTGGATCTAGTAGATAATCACAGTATTGTTGCGCACGATATATATATTCGTGTCCACGGCTCCCAACTAGGCAAAAAGGGTCTTTCTGTTAATTCCTTGAAGTGGATCCTGGCAATTGCAATAGTCTCTGCAGCAGTTGGATTGCTTACAATAACTGGCTATGTATGGAAGAAAAAATTGGAACGGCGGCAGGGCTCTGTCGACGACACCGAGCGCCCCACAGTCTTCCTCTTCCTCGGCCTCGATCTCGACCAGATCGACGTTATCGGCGGTGACGATAAGCACCTGGCCATAGAGAAGCTGGCAGAGCTTGGCGTCGTATCTTCTTCCCGGCCTTGGAGAGCTTGTCCATTGGTTTCCGGTTCCGATTTCGATTCCGAAGAGAGAGATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

535

Amino Acids

59.32

Weight (kDa)

5.87

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 173 1.1e-28 D-mannose binding lectin
S_locus_glycop PF00954 226 - 317 1e-15 S-locus glycoprotein domain
PAN_2 PF08276 346 - 407 1.5e-14 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1245
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 504
AccB7I CCANNNNNTGG 1 cut(s) 112
AccI GTMKAC 2 cut(s) 187, 1413
AccIII TCCGGA 1 cut(s) 1066
AciI CCGC 5 cut(s) 276, 876, 968, 1399, 1482
AclWI GGATC 7 cut(s) 309, 527, 834, 1077, 1224, 1312, 1325
AcoI YGGCCR 2 cut(s) 493, 1500
AcsI RAATTY 1 cut(s) 163
AcyI GRCGYC 2 cut(s) 505, 1527
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 3 cut(s) 61, 81, 576
AfeI AGCGCT 1 cut(s) 525
AfiI CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1548
AjnI CCWGG 8 cut(s) 82, 256, 460, 515, 593, 841, 1320, 1497
AjuI GAANNNNNNNTTGG 2 cut(s) 1373, 1405
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
Alw26I GTCTC 3 cut(s) 739, 1157, 1342
AlwI GGATC 7 cut(s) 309, 527, 834, 1077, 1224, 1312, 1325
Aor13HI TCCGGA 1 cut(s) 1066
Aor51HI AGCGCT 1 cut(s) 525
AoxI GGCC 4 cut(s) 493, 1450, 1500, 1544
ApeKI GCWGC 4 cut(s) 521, 793, 990, 1343
ApoI RAATTY 1 cut(s) 163
AspLEI GCGC 4 cut(s) 507, 526, 1246, 1428
AspS9I GGNCC 3 cut(s) 129, 878, 981
AsuC2I CCSGG 2 cut(s) 543, 1543
AsuHPI GGTGA 5 cut(s) 544, 857, 909, 1069, 1496
AvaII GGWCC 3 cut(s) 129, 878, 981
AxyI CCTNAGG 1 cut(s) 139
BaeI ACNNNNGTAYC 2 cut(s) 318, 351
BalI TGGCCA 2 cut(s) 495, 1502
BamHI GGATCC 1 cut(s) 1317
BanI GGYRCC 1 cut(s) 504
BanII GRGCYC 1 cut(s) 1409
BbsI GAAGAC 1 cut(s) 1429
BbvI GCAGC 4 cut(s) 533, 780, 977, 1355
BccI CCATC 2 cut(s) 275, 1595
BceAI ACGGC 2 cut(s) 1285, 1412
BciT130I CCWGG 8 cut(s) 84, 258, 462, 517, 595, 843, 1322, 1499
BciVI GTATCC 2 cut(s) 376, 637
BcnI CCSGG 2 cut(s) 543, 1543
BcoDI GTCTC 3 cut(s) 739, 1157, 1342
BfaI CTAG 4 cut(s) 309, 377, 1220, 1280
BfmI CTRYAG 2 cut(s) 774, 1341
BfoI RGCGCY 3 cut(s) 508, 527, 1429
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 2 cut(s) 376, 637
BisI GCNGC 5 cut(s) 522, 794, 991, 1344, 1400
BlsI GCNGC 5 cut(s) 523, 795, 992, 1345, 1401
Bme18I GGWCC 3 cut(s) 129, 878, 981
BmgT120I GGNCC 3 cut(s) 129, 878, 981
BmiI GGNNCC 6 cut(s) 130, 506, 880, 1273, 1319, 1576
BpiI GAAGAC 1 cut(s) 1429
BpmI CTGGAG 1 cut(s) 240
BpuMI CCSGG 2 cut(s) 543, 1543
BsaBI GATNNNNATC 1 cut(s) 285
BsaHI GRCGYC 2 cut(s) 505, 1527
BsaJI CCNNGG 7 cut(s) 124, 181, 516, 841, 1267, 1447, 1547
BsaWI WCCGGW 3 cut(s) 386, 1066, 1571
BsaXI ACNNNNNCTCC 2 cut(s) 1543, 1573
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1548
Bse1I ACTGG 6 cut(s) 373, 496, 578, 940, 1218, 1372
Bse21I CCTNAGG 1 cut(s) 139
Bse3DI GCAATG 2 cut(s) 360, 871
Bse8I GATNNNNATC 1 cut(s) 285
BseAI TCCGGA 1 cut(s) 1066
BseBI CCWGG 8 cut(s) 84, 258, 462, 517, 595, 843, 1322, 1499
BseDI CCNNGG 7 cut(s) 124, 181, 516, 841, 1267, 1447, 1547
BseGI GGATG 4 cut(s) 45, 286, 439, 512
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1548
BseMI GCAATG 2 cut(s) 360, 871
BseMII CTCAG 2 cut(s) 392, 759
BseNI ACTGG 6 cut(s) 373, 496, 578, 940, 1218, 1372
BseXI GCAGC 4 cut(s) 533, 780, 977, 1355
BshFI GGCC 4 cut(s) 495, 1452, 1502, 1546
BshNI GGYRCC 1 cut(s) 504
BsiSI CCGG 5 cut(s) 387, 543, 1067, 1543, 1572
BslFI GGGAC 2 cut(s) 142, 864
BslI CCNNNNNNNGG 5 cut(s) 112, 542, 967, 1314, 1548
BsmAI GTCTC 3 cut(s) 739, 1157, 1342
BsmFI GGGAC 2 cut(s) 142, 864
BsnI GGCC 4 cut(s) 495, 1452, 1502, 1546
Bsp1286I GDGCHC 1 cut(s) 1409
Bsp13I TCCGGA 1 cut(s) 1066
Bsp143I GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
BspACI CCGC 5 cut(s) 276, 876, 968, 1399, 1482
BspANI GGCC 4 cut(s) 495, 1452, 1502, 1546
BspCNI CTCAG 2 cut(s) 393, 758
BspEI TCCGGA 1 cut(s) 1066
BspLI GGNNCC 6 cut(s) 130, 506, 880, 1273, 1319, 1576
BspMAI CTGCAG 1 cut(s) 1345
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 7 cut(s) 309, 527, 834, 1077, 1224, 1312, 1325
BspT107I GGYRCC 1 cut(s) 504
BsrDI GCAATG 2 cut(s) 360, 871
BsrI ACTGG 6 cut(s) 373, 496, 578, 940, 1218, 1372
BssECI CCNNGG 7 cut(s) 124, 181, 516, 841, 1267, 1447, 1547
BssMI GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
BssNAI GTATAC 1 cut(s) 188
BssNI GRCGYC 2 cut(s) 505, 1527
BssT1I CCWWGG 3 cut(s) 124, 181, 1547
Bst1107I GTATAC 1 cut(s) 188
Bst2UI CCWGG 8 cut(s) 84, 258, 462, 517, 595, 843, 1322, 1499
Bst4CI ACNGT 4 cut(s) 857, 1133, 1235, 1435
Bst6I CTCTTC 2 cut(s) 1448, 1587
BstACI GRCGYC 2 cut(s) 505, 1527
BstC8I GCNNGC 1 cut(s) 1515
BstDEI CTNAG 3 cut(s) 139, 401, 745
BstDSI CCRYGG 1 cut(s) 1267
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 4 cut(s) 45, 286, 439, 512
BstH2I RGCGCY 3 cut(s) 508, 527, 1429
BstHHI GCGC 4 cut(s) 507, 526, 1246, 1428
BstKTI GATC 9 cut(s) 304, 439, 535, 829, 1072, 1219, 1320, 1459, 1470
BstMAI GTCTC 3 cut(s) 739, 1157, 1342
BstMBI GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
BstMWI GCNNNNNNNGC 2 cut(s) 799, 1519
BstNI CCWGG 8 cut(s) 84, 258, 462, 517, 595, 843, 1322, 1499
BstPI GGTNACC 1 cut(s) 101
BstSFI CTRYAG 2 cut(s) 774, 1341
BstV1I GCAGC 4 cut(s) 533, 780, 977, 1355
BstV2I GAAGAC 1 cut(s) 1429
BstX2I RGATCY 3 cut(s) 826, 1216, 1317
BstYI RGATCY 3 cut(s) 826, 1216, 1317
BstZ17I GTATAC 1 cut(s) 188
Bsu36I CCTNAGG 1 cut(s) 139
BsuI GTATCC 2 cut(s) 376, 637
BsuRI GGCC 4 cut(s) 495, 1452, 1502, 1546
BtgI CCRYGG 1 cut(s) 1267
BtsCI GGATG 4 cut(s) 45, 286, 439, 512
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 3 cut(s) 29, 103, 590
BveI ACCTGC 1 cut(s) 71
Cac8I GCNNGC 1 cut(s) 1515
CfoI GCGC 4 cut(s) 507, 526, 1246, 1428
Cfr13I GGNCC 3 cut(s) 129, 878, 981
CseI GACGC 1 cut(s) 1516
Csp6I GTAC 3 cut(s) 60, 80, 575
CviAII CATG 3 cut(s) 902, 921, 1197
CviQI GTAC 3 cut(s) 60, 80, 575
DdeI CTNAG 3 cut(s) 139, 401, 745
DinI GGCGCC 1 cut(s) 506
DpnI GATC 9 cut(s) 303, 438, 534, 828, 1071, 1218, 1319, 1458, 1469
DpnII GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
DraIII CACNNNGTG 1 cut(s) 423
EaeI YGGCCR 2 cut(s) 493, 1500
Eam1104I CTCTTC 2 cut(s) 1448, 1587
EarI CTCTTC 2 cut(s) 1448, 1587
Eco130I CCWWGG 3 cut(s) 124, 181, 1547
Eco24I GRGCYC 1 cut(s) 1409
Eco47I GGWCC 3 cut(s) 129, 878, 981
Eco47III AGCGCT 1 cut(s) 525
Eco81I CCTNAGG 1 cut(s) 139
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRII CCWGG 8 cut(s) 82, 256, 460, 515, 593, 841, 1320, 1497
EcoT14I CCWWGG 3 cut(s) 124, 181, 1547
EcoT38I GRGCYC 1 cut(s) 1409
EgeI GGCGCC 1 cut(s) 506
EheI GGCGCC 1 cut(s) 506
ErhI CCWWGG 3 cut(s) 124, 181, 1547
FaeI CATG 3 cut(s) 905, 924, 1200
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 539, 571
FaqI GGGAC 2 cut(s) 142, 864
FatI CATG 3 cut(s) 901, 920, 1196
FauI CCCGC 1 cut(s) 269
FauNDI CATATG 1 cut(s) 1168
FblI GTMKAC 2 cut(s) 187, 1413
Fnu4HI GCNGC 5 cut(s) 522, 794, 991, 1344, 1400
FokI GGATG 4 cut(s) 32, 293, 426, 499
FriOI GRGCYC 1 cut(s) 1409
Fsp4HI GCNGC 5 cut(s) 522, 794, 991, 1344, 1400
FspBI CTAG 4 cut(s) 309, 377, 1220, 1280
FspI TGCGCA 1 cut(s) 1245
GlaI GCGC 4 cut(s) 506, 525, 1245, 1427
GluI GCNGC 5 cut(s) 522, 794, 991, 1344, 1400
GsuI CTGGAG 1 cut(s) 240
HaeII RGCGCY 3 cut(s) 508, 527, 1429
HaeIII GGCC 4 cut(s) 495, 1452, 1502, 1546
HapII CCGG 5 cut(s) 387, 543, 1067, 1543, 1572
HgaI GACGC 1 cut(s) 1516
HhaI GCGC 4 cut(s) 507, 526, 1246, 1428
Hin1I GRCGYC 2 cut(s) 505, 1527
Hin1II CATG 3 cut(s) 905, 924, 1200
Hin6I GCGC 4 cut(s) 505, 524, 1244, 1426
HinP1I GCGC 4 cut(s) 505, 524, 1244, 1426
HincII GTYRAC 2 cut(s) 327, 1414
HindII GTYRAC 2 cut(s) 327, 1414
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 6 cut(s) 192, 239, 251, 358, 769, 1586
HpaII CCGG 5 cut(s) 387, 543, 1067, 1543, 1572
HphI GGTGA 5 cut(s) 544, 857, 909, 1069, 1496
Hpy166II GTNNAC 6 cut(s) 188, 327, 552, 899, 1267, 1414
Hpy188I TCNGA 6 cut(s) 402, 448, 739, 957, 1579, 1591
Hpy188III TCNNGA 3 cut(s) 896, 1067, 1460
Hpy8I GTNNAC 6 cut(s) 188, 327, 552, 899, 1267, 1414
Hpy99I CGWCG 3 cut(s) 1418, 1475, 1532
HpyAV CCTTC 2 cut(s) 565, 592
HpyCH4III ACNGT 4 cut(s) 857, 1133, 1235, 1435
HpyCH4IV ACGT 2 cut(s) 818, 1473
HpyCH4V TGCA 6 cut(s) 215, 353, 924, 1140, 1331, 1343
HpyF10VI GCNNNNNNNGC 2 cut(s) 799, 1519
HpyF3I CTNAG 3 cut(s) 139, 401, 745
HpySE526I ACGT 2 cut(s) 818, 1473
Hsp92I GRCGYC 2 cut(s) 505, 1527
Hsp92II CATG 3 cut(s) 905, 924, 1200
HspAI GCGC 4 cut(s) 505, 524, 1244, 1426
KasI GGCGCC 1 cut(s) 504
Kpn2I TCCGGA 1 cut(s) 1066
Kzo9I GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
LmnI GCTCC 1 cut(s) 1277
Lsp1109I GCAGC 4 cut(s) 533, 780, 977, 1355
MaeI CTAG 4 cut(s) 309, 377, 1220, 1280
MaeII ACGT 2 cut(s) 818, 1473
MaeIII GTNAC 6 cut(s) 17, 25, 101, 1019, 1109, 1484
MalI GATC 9 cut(s) 303, 438, 534, 828, 1071, 1218, 1319, 1458, 1469
MboI GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
MfeI CAATTG 1 cut(s) 1326
MflI RGATCY 3 cut(s) 826, 1216, 1317
MhlI GDGCHC 1 cut(s) 1409
MlsI TGGCCA 2 cut(s) 495, 1502
MluCI AATT 7 cut(s) 163, 752, 835, 1208, 1303, 1326, 1388
MluNI TGGCCA 2 cut(s) 495, 1502
Mly113I GGCGCC 1 cut(s) 505
MmeI TCCRAC 3 cut(s) 279, 804, 1330
MnlI CCTC 7 cut(s) 373, 454, 706, 750, 1451, 1457, 1463
Mox20I TGGCCA 2 cut(s) 495, 1502
MroI TCCGGA 1 cut(s) 1066
MscI TGGCCA 2 cut(s) 495, 1502
MseI TTAA 3 cut(s) 468, 728, 1302
MslI CAYNNNNRTG 3 cut(s) 220, 919, 925
Msp20I TGGCCA 2 cut(s) 495, 1502
MspA1I CMGCKG 2 cut(s) 276, 968
MspI CCGG 5 cut(s) 387, 543, 1067, 1543, 1572
MunI CAATTG 1 cut(s) 1326
MvaI CCWGG 8 cut(s) 84, 258, 462, 517, 595, 843, 1322, 1499
MwoI GCNNNNNNNGC 2 cut(s) 799, 1519
NarI GGCGCC 1 cut(s) 505
NciI CCSGG 2 cut(s) 543, 1543
NdeI CATATG 1 cut(s) 1168
NdeII GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
NlaIII CATG 3 cut(s) 905, 924, 1200
NlaIV GGNNCC 6 cut(s) 130, 506, 880, 1273, 1319, 1576
NmeAIII GCCGAG 1 cut(s) 1428
NmuCI GTSAC 2 cut(s) 1109, 1484
NsbI TGCGCA 1 cut(s) 1245
PcsI WCGNNNNNNNCGW 3 cut(s) 1419, 1467, 1485
PfeI GAWTC 6 cut(s) 192, 239, 251, 358, 769, 1586
PflFI GACNNNGTC 1 cut(s) 1198
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 5 cut(s) 523, 795, 992, 1345, 1401
PluTI GGCGCC 1 cut(s) 508
PpuMI RGGWCCY 1 cut(s) 129
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 8 cut(s) 82, 256, 460, 515, 593, 841, 1320, 1497
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 8 cut(s) 82, 256, 460, 515, 593, 841, 1320, 1497
PspN4I GGNNCC 6 cut(s) 130, 506, 880, 1273, 1319, 1576
PspPI GGNCC 3 cut(s) 129, 878, 981
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 1 cut(s) 1345
PsuI RGATCY 3 cut(s) 826, 1216, 1317
PsyI GACNNNGTC 1 cut(s) 1198
RsaI GTAC 3 cut(s) 61, 81, 576
RsaNI GTAC 3 cut(s) 60, 80, 575
RseI CAYNNNNRTG 3 cut(s) 220, 919, 925
SalI GTCGAC 1 cut(s) 1412
SaqAI TTAA 3 cut(s) 468, 728, 1302
SatI GCNGC 5 cut(s) 522, 794, 991, 1344, 1400
Sau3AI GATC 9 cut(s) 301, 436, 532, 826, 1069, 1216, 1317, 1456, 1467
Sau96I GGNCC 3 cut(s) 129, 878, 981
SduI GDGCHC 1 cut(s) 1409
SfcI CTRYAG 2 cut(s) 774, 1341
SfoI GGCGCC 1 cut(s) 506
SinI GGWCC 3 cut(s) 129, 878, 981
SmiMI CAYNNNNRTG 3 cut(s) 220, 919, 925
Sse9I AATT 7 cut(s) 163, 752, 835, 1208, 1303, 1326, 1388
SsiI CCGC 5 cut(s) 276, 876, 968, 1399, 1482
SspDI GGCGCC 1 cut(s) 504
SspI AATATT 1 cut(s) 1180
SspMI CTAG 4 cut(s) 309, 377, 1220, 1280
StyI CCWWGG 3 cut(s) 124, 181, 1547
TaaI ACNGT 4 cut(s) 857, 1133, 1235, 1435
TaiI ACGT 2 cut(s) 821, 1476
TaqI TCGA 6 cut(s) 435, 1413, 1455, 1461, 1470, 1584
TasI AATT 7 cut(s) 163, 752, 835, 1208, 1303, 1326, 1388
TauI GCSGC 1 cut(s) 1402
TfiI GAWTC 6 cut(s) 192, 239, 251, 358, 769, 1586
Tru1I TTAA 3 cut(s) 468, 728, 1302
Tru9I TTAA 3 cut(s) 468, 728, 1302
TscAI CASTG 3 cut(s) 36, 103, 590
TseFI GTSAC 2 cut(s) 1109, 1484
TseI GCWGC 4 cut(s) 521, 793, 990, 1343
Tsp45I GTSAC 2 cut(s) 1109, 1484
TspDTI ATGAA 3 cut(s) 174, 371, 918
TspGWI ACGGA 1 cut(s) 1038
TspRI CASTG 3 cut(s) 36, 103, 590
Tth111I GACNNNGTC 1 cut(s) 1198
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 3 cut(s) 129, 878, 981
XapI RAATTY 1 cut(s) 163
XcmI CCANNNNNNNNNTGG 1 cut(s) 1510
XmiI GTMKAC 2 cut(s) 187, 1413
XspI CTAG 4 cut(s) 309, 377, 1220, 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.