Rmu_sc0000955.1_g000020

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000955.1
OG0000114
Physical Location & Seq
Reverse (-)
69333 .. 72542
3210 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000955.1_g000020.1.cds

Sequence Viewer

Length: 1896 bp
atggggtggctcttgtgttaccttgtaacactgctcgtatctcacatcctgtcattctgtacctgccaagacaaaatagtaccaggacagtatatcggtggtaaccacactttggtttcttcccttgggaccttttcattaggcttcttcaatcctaatgaaaattctactaaatacttccttggtatgcgattcaacaaattcccaaatactgctttagtatgggtggctaatagagaatctcctcttgattctccgggtttctttatgctcagcagcgatggaaatcttgtggtgttggatcaaactagaaaacttgtctggtcaactaatgcatcagtagctgcttctgcaatgaatcacacaactggattactagaggataccggaaaccttgttctgaggtttgaagaagtcactttgtgggagagcttcgatcatccctgtgatactatgttgcctggcattaagatttccttgaacaaaaagactggccaacaaaggcgccttacatcctgggctgcgcttgatgatccacaacccggaaagttcaccttcggaatagatcctaaagtaccagttcaggcctttatctggaaggaaactactccgtattatagaagttctgtgtacattggcaaggatacaacacattttcaaaatccaggtggaaccgcgtttttcctttcatacaactttgatgttgatgatgtttatcttgcttacagtgtctcggatagctcagtaaaattgagggtctggttggatcctacagggaaaattaaacagcagttgtggcagaattctagtaaaacgtggttggaactaggaaattcacggcctgttgataactgtgacttttatgctcattgcggtcccaatagtgcctgtcgtagaggtgaacccctgtcatcaccatgcaaatgtttgactggtttttcggccaagtttccaaaccaatgggcggtggggaattggtccagtggctgcgttagggaaaaggtgttgacatgtggtaatggcataaaaagttacttttcaaagcttgaaagggtgaaactgccggatcattttgttctgttaaacaataggagtatgagcgagtgtgaatctgaatgtcggcagaactgttcttgcacagcttataattatgtagatgcgacagatggaagtaatattgggacatgcttggcctggtttggagaattactggatctagaagagaataaaactatttttgcaaatgatatttatattcgtgttcatggctccgaactagatccttttcaaaagacaaagttggattgggatacacgctttcaaattatacaaggtattgctcaaggagtactatatatccacaaatactctagattgaaaatcatccacagagatctaaaagcaagtaatgttctgttggatggtacaatgaacccgaaagtgtccgactttggaatggcaagaatttttgatataaaccaaattgaagcaaataccaaaaagattgttgggacatatggctacatgtctcctgaatacgcactctatggtcatttctctgagaaattggatgtatttagtttcggagtattgttgttagagattatatgggaattatgtaaagaatgtagaggagcggaggtaattgacgtatcagtaaaggaaacatgccagattcatgaagctttgaggtgtatccatgtcgggcttttgtgtgttcaagaagctccagctgatcgacccacaatgtcatcggtgattcatatgctcgaggtcaatgaagctacatcacttccaccctccaaagaacctgctttttcaacaagtaggaattcaagtcctgttgccacttattccaaaaatgtagtcactattactttgccagaacctcgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

631

Amino Acids

70.77

Weight (kDa)

6.29

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1146
Acc36I ACCTGC 2 cut(s) 71, 1819
AccB1I GGYRCC 1 cut(s) 504
AccB7I CCANNNNNTGG 1 cut(s) 112
AccBSI CCGCTC 1 cut(s) 1637
AccII CGCG 1 cut(s) 677
AciI CCGC 4 cut(s) 675, 873, 965, 1637
AclWI GGATC 8 cut(s) 309, 527, 560, 761, 774, 1074, 1221, 1274
AcoI YGGCCR 2 cut(s) 493, 942
AcsI RAATTY 6 cut(s) 163, 200, 802, 832, 1464, 1831
AcyI GRCGYC 1 cut(s) 505
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 6 cut(s) 61, 81, 576, 632, 1350, 1426
AfiI CCNNNNNNNGG 4 cut(s) 112, 542, 594, 964
AflIII ACRYGT 2 cut(s) 1010, 1524
AjnI CCWGG 5 cut(s) 82, 460, 515, 664, 1193
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
AluBI AGCT 9 cut(s) 344, 432, 741, 1045, 1142, 1685, 1727, 1733, 1784
AluI AGCT 9 cut(s) 344, 432, 741, 1045, 1142, 1685, 1727, 1733, 1784
Alw26I GTCTC 2 cut(s) 736, 1533
AlwI GGATC 8 cut(s) 309, 527, 560, 761, 774, 1074, 1221, 1274
AlwNI CAGNNNCTG 2 cut(s) 344, 987
Ama87I CYCGRG 1 cut(s) 1769
AoxI GGCC 5 cut(s) 493, 585, 839, 942, 1191
ApeKI GCWGC 4 cut(s) 276, 344, 521, 987
ApoI RAATTY 6 cut(s) 163, 200, 802, 832, 1464, 1831
ArsI GACNNNNNNTTYG 4 cut(s) 922, 954, 1851, 1883
AspLEI GCGC 2 cut(s) 507, 526
AspS9I GGNCC 3 cut(s) 129, 875, 978
AsuC2I CCSGG 2 cut(s) 258, 543
AsuHPI GGTGA 5 cut(s) 544, 906, 911, 1066, 1768
AvaI CYCGRG 1 cut(s) 1769
AvaII GGWCC 3 cut(s) 129, 875, 978
BalI TGGCCA 1 cut(s) 495
BamHI GGATCC 1 cut(s) 766
BanI GGYRCC 1 cut(s) 504
BbvI GCAGC 4 cut(s) 288, 331, 508, 974
BccI CCATC 3 cut(s) 275, 1160, 1415
BceAI ACGGC 1 cut(s) 854
BciT130I CCWGG 5 cut(s) 84, 462, 517, 666, 1195
BciVI GTATCC 4 cut(s) 376, 637, 1303, 1706
BcnI CCSGG 2 cut(s) 258, 543
BcoDI GTCTC 2 cut(s) 736, 1533
BfaI CTAG 7 cut(s) 309, 377, 807, 827, 1217, 1277, 1371
BfmI CTRYAG 1 cut(s) 771
BfoI RGCGCY 1 cut(s) 508
BfuAI ACCTGC 2 cut(s) 71, 1819
BfuI GTATCC 4 cut(s) 376, 637, 1303, 1706
BglII AGATCT 1 cut(s) 1393
BisI GCNGC 4 cut(s) 277, 345, 522, 988
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 4 cut(s) 278, 346, 523, 989
BmcAI AGTACT 1 cut(s) 1350
Bme1390I CCNGG 7 cut(s) 84, 258, 462, 517, 543, 666, 1195
Bme18I GGWCC 3 cut(s) 129, 875, 978
BmeT110I CYCGRG 1 cut(s) 1769
BmgT120I GGNCC 3 cut(s) 129, 875, 978
BmiI GGNNCC 6 cut(s) 130, 506, 673, 768, 877, 1270
BmrFI CCNGG 7 cut(s) 84, 258, 462, 517, 543, 666, 1195
BmsI GCATC 2 cut(s) 344, 1147
BpmI CTGGAG 1 cut(s) 1713
Bpu1102I GCTNAGC 1 cut(s) 272
BpuEI CTTGAG 1 cut(s) 1326
BpuMI CCSGG 2 cut(s) 258, 543
BsaBI GATNNNNATC 2 cut(s) 285, 714
BsaHI GRCGYC 1 cut(s) 505
BsaJI CCNNGG 3 cut(s) 124, 181, 516
BsaWI WCCGGW 1 cut(s) 386
BsaXI ACNNNNNCTCC 2 cut(s) 1626, 1656
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 542, 594, 964
Bse1I ACTGG 6 cut(s) 373, 496, 578, 937, 981, 1215
Bse3DI GCAATG 2 cut(s) 360, 868
Bse8I GATNNNNATC 2 cut(s) 285, 714
BseBI CCWGG 5 cut(s) 84, 462, 517, 666, 1195
BseDI CCNNGG 3 cut(s) 124, 181, 516
BseGI GGATG 6 cut(s) 45, 439, 512, 1383, 1426, 1576
BseJI GATNNNNATC 2 cut(s) 285, 714
BseLI CCNNNNNNNGG 4 cut(s) 112, 542, 594, 964
BseMI GCAATG 2 cut(s) 360, 868
BseMII CTCAG 4 cut(s) 286, 392, 756, 1551
BseNI ACTGG 6 cut(s) 373, 496, 578, 937, 981, 1215
BseRI GAGGAG 2 cut(s) 234, 1647
BseXI GCAGC 4 cut(s) 288, 331, 508, 974
Bsh1236I CGCG 1 cut(s) 677
BshFI GGCC 5 cut(s) 495, 587, 841, 944, 1193
BshNI GGYRCC 1 cut(s) 504
BsiHKCI CYCGRG 1 cut(s) 1769
BsiSI CCGG 4 cut(s) 257, 387, 543, 1064
BslFI GGGAC 4 cut(s) 142, 861, 1195, 1525
BslI CCNNNNNNNGG 4 cut(s) 112, 542, 594, 964
BsmAI GTCTC 2 cut(s) 736, 1533
BsmFI GGGAC 4 cut(s) 142, 861, 1195, 1525
BsnI GGCC 5 cut(s) 495, 587, 841, 944, 1193
BsoBI CYCGRG 1 cut(s) 1769
Bsp1407I TGTACA 1 cut(s) 630
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 4 cut(s) 675, 873, 965, 1637
BspANI GGCC 5 cut(s) 495, 587, 841, 944, 1193
BspCNI CTCAG 4 cut(s) 285, 393, 755, 1552
BspFNI CGCG 1 cut(s) 677
BspHI TCATGA 1 cut(s) 1678
BspLI GGNNCC 6 cut(s) 130, 506, 673, 768, 877, 1270
BspMI ACCTGC 2 cut(s) 71, 1819
BspPI GGATC 8 cut(s) 309, 527, 560, 761, 774, 1074, 1221, 1274
BspT107I GGYRCC 1 cut(s) 504
BsrBI CCGCTC 1 cut(s) 1637
BsrDI GCAATG 2 cut(s) 360, 868
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 6 cut(s) 373, 496, 578, 937, 981, 1215
BssECI CCNNGG 3 cut(s) 124, 181, 516
BssNI GRCGYC 1 cut(s) 505
BssT1I CCWWGG 2 cut(s) 124, 181
Bst2UI CCWGG 5 cut(s) 84, 462, 517, 666, 1195
Bst4CI ACNGT 4 cut(s) 90, 728, 854, 1130
Bst6I CTCTTC 1 cut(s) 1215
BstACI GRCGYC 1 cut(s) 505
BstAUI TGTACA 1 cut(s) 630
BstDEI CTNAG 4 cut(s) 272, 401, 742, 1560
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 6 cut(s) 45, 439, 512, 1383, 1426, 1576
BstFNI CGCG 1 cut(s) 677
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 2 cut(s) 507, 526
BstMAI GTCTC 2 cut(s) 736, 1533
BstMWI GCNNNNNNNGC 3 cut(s) 341, 350, 796
BstNI CCWGG 5 cut(s) 84, 462, 517, 666, 1195
BstNSI RCATGY 4 cut(s) 1014, 1188, 1528, 1671
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 7 cut(s) 82, 256, 460, 515, 541, 664, 1193
BstSFI CTRYAG 1 cut(s) 771
BstUI CGCG 1 cut(s) 677
BstV1I GCAGC 4 cut(s) 288, 331, 508, 974
BstX2I RGATCY 5 cut(s) 565, 766, 1213, 1279, 1393
BstXI CCANNNNNNTGG 1 cut(s) 960
BstYI RGATCY 5 cut(s) 565, 766, 1213, 1279, 1393
BsuI GTATCC 4 cut(s) 376, 637, 1303, 1706
BsuRI GGCC 5 cut(s) 495, 587, 841, 944, 1193
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 6 cut(s) 45, 439, 512, 1383, 1426, 1576
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 3 cut(s) 29, 733, 988
BveI ACCTGC 2 cut(s) 71, 1819
CaiI CAGNNNCTG 2 cut(s) 344, 987
CciI TCATGA 1 cut(s) 1678
CfoI GCGC 2 cut(s) 507, 526
Cfr13I GGNCC 3 cut(s) 129, 875, 978
Csp6I GTAC 6 cut(s) 60, 80, 575, 631, 1349, 1425
CviAII CATG 8 cut(s) 918, 1011, 1185, 1265, 1525, 1668, 1679, 1700
CviQI GTAC 6 cut(s) 60, 80, 575, 631, 1349, 1425
DdeI CTNAG 4 cut(s) 272, 401, 742, 1560
DinI GGCGCC 1 cut(s) 506
DraIII CACNNNGTG 1 cut(s) 423
EaeI YGGCCR 2 cut(s) 493, 942
Eam1104I CTCTTC 1 cut(s) 1215
EarI CTCTTC 1 cut(s) 1215
Eco130I CCWWGG 2 cut(s) 124, 181
Eco147I AGGCCT 1 cut(s) 587
Eco47I GGWCC 3 cut(s) 129, 875, 978
Eco88I CYCGRG 1 cut(s) 1769
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 2 cut(s) 802, 1831
EcoRII CCWGG 5 cut(s) 82, 460, 515, 664, 1193
EcoT14I CCWWGG 2 cut(s) 124, 181
EcoT22I ATGCAT 1 cut(s) 337
EgeI GGCGCC 1 cut(s) 506
EheI GGCGCC 1 cut(s) 506
ErhI CCWWGG 2 cut(s) 124, 181
FaeI CATG 8 cut(s) 921, 1014, 1188, 1268, 1528, 1671, 1682, 1703
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 539, 571
FaqI GGGAC 4 cut(s) 142, 861, 1195, 1525
FatI CATG 8 cut(s) 917, 1010, 1184, 1264, 1524, 1667, 1678, 1699
FauNDI CATATG 2 cut(s) 1516, 1764
Fnu4HI GCNGC 4 cut(s) 277, 345, 522, 988
FokI GGATG 6 cut(s) 32, 426, 499, 1370, 1433, 1583
Fsp4HI GCNGC 4 cut(s) 277, 345, 522, 988
FspBI CTAG 7 cut(s) 309, 377, 807, 827, 1217, 1277, 1371
GlaI GCGC 2 cut(s) 506, 525
GluI GCNGC 4 cut(s) 277, 345, 522, 988
GsuI CTGGAG 1 cut(s) 1713
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 5 cut(s) 495, 587, 841, 944, 1193
HapII CCGG 4 cut(s) 257, 387, 543, 1064
HhaI GCGC 2 cut(s) 507, 526
Hin1I GRCGYC 1 cut(s) 505
Hin1II CATG 8 cut(s) 921, 1014, 1188, 1268, 1528, 1671, 1682, 1703
Hin6I GCGC 2 cut(s) 505, 524
HinP1I GCGC 2 cut(s) 505, 524
HincII GTYRAC 2 cut(s) 327, 1008
HindII GTYRAC 2 cut(s) 327, 1008
HindIII AAGCTT 2 cut(s) 1043, 1683
HinfI GANTC 7 cut(s) 192, 239, 251, 358, 1109, 1675, 1759
HpaII CCGG 4 cut(s) 257, 387, 543, 1064
HphI GGTGA 5 cut(s) 544, 906, 911, 1066, 1768
Hpy166II GTNNAC 5 cut(s) 327, 552, 631, 902, 1008
Hpy188I TCNGA 8 cut(s) 402, 560, 736, 1114, 1273, 1447, 1561, 1586
Hpy188III TCNNGA 7 cut(s) 248, 595, 1217, 1371, 1532, 1679, 1721
Hpy8I GTNNAC 5 cut(s) 327, 552, 631, 902, 1008
HpyAV CCTTC 2 cut(s) 565, 592
HpyCH4III ACNGT 4 cut(s) 90, 728, 854, 1130
HpyCH4IV ACGT 2 cut(s) 815, 1650
HpyCH4V TGCA 5 cut(s) 335, 353, 921, 1137, 1241
HpyF10VI GCNNNNNNNGC 3 cut(s) 341, 350, 796
HpyF3I CTNAG 4 cut(s) 272, 401, 742, 1560
HpySE526I ACGT 2 cut(s) 815, 1650
Hsp92I GRCGYC 1 cut(s) 505
Hsp92II CATG 8 cut(s) 921, 1014, 1188, 1268, 1528, 1671, 1682, 1703
HspAI GCGC 2 cut(s) 505, 524
KasI GGCGCC 1 cut(s) 504
LmnI GCTCC 3 cut(s) 1274, 1634, 1732
Lsp1109I GCAGC 4 cut(s) 288, 331, 508, 974
LweI GCATC 2 cut(s) 344, 1147
MaeI CTAG 7 cut(s) 309, 377, 807, 827, 1217, 1277, 1371
MaeII ACGT 2 cut(s) 815, 1650
MaeIII GTNAC 7 cut(s) 17, 25, 101, 415, 854, 1031, 1867
MbiI CCGCTC 1 cut(s) 1637
MboII GAAGA 4 cut(s) 111, 139, 422, 1232
MflI RGATCY 5 cut(s) 565, 766, 1213, 1279, 1393
MlsI TGGCCA 1 cut(s) 495
MluNI TGGCCA 1 cut(s) 495
Mly113I GGCGCC 1 cut(s) 505
MmeI TCCRAC 6 cut(s) 279, 744, 801, 1281, 1398, 1470
Mox20I TGGCCA 1 cut(s) 495
Mph1103I ATGCAT 1 cut(s) 337
MscI TGGCCA 1 cut(s) 495
MseI TTAA 3 cut(s) 468, 783, 1082
MslI CAYNNNNRTG 3 cut(s) 444, 916, 922
Msp20I TGGCCA 1 cut(s) 495
MspA1I CMGCKG 1 cut(s) 1733
MspI CCGG 4 cut(s) 257, 387, 543, 1064
MspR9I CCNGG 7 cut(s) 84, 258, 462, 517, 543, 666, 1195
MvaI CCWGG 5 cut(s) 84, 462, 517, 666, 1195
MvnI CGCG 1 cut(s) 677
MwoI GCNNNNNNNGC 3 cut(s) 341, 350, 796
NarI GGCGCC 1 cut(s) 505
NciI CCSGG 2 cut(s) 258, 543
NdeI CATATG 2 cut(s) 1516, 1764
NlaIII CATG 8 cut(s) 921, 1014, 1188, 1268, 1528, 1671, 1682, 1703
NlaIV GGNNCC 6 cut(s) 130, 506, 673, 768, 877, 1270
NmuCI GTSAC 3 cut(s) 415, 854, 1867
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 4 cut(s) 1014, 1188, 1528, 1671
PaeR7I CTCGAG 1 cut(s) 1769
PagI TCATGA 1 cut(s) 1678
PceI AGGCCT 1 cut(s) 587
PciI ACATGT 2 cut(s) 1010, 1524
PfeI GAWTC 7 cut(s) 192, 239, 251, 358, 1109, 1675, 1759
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 4 cut(s) 278, 346, 523, 989
PluTI GGCGCC 1 cut(s) 508
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 2 cut(s) 1010, 1524
PsiI TTATAA 1 cut(s) 1146
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 5 cut(s) 82, 460, 515, 664, 1193
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 5 cut(s) 82, 460, 515, 664, 1193
PspN4I GGNNCC 6 cut(s) 130, 506, 673, 768, 877, 1270
PspPI GGNCC 3 cut(s) 129, 875, 978
PspPPI RGGWCCY 1 cut(s) 129
PspXI VCTCGAGB 1 cut(s) 1769
PstNI CAGNNNCTG 2 cut(s) 344, 987
PsuI RGATCY 5 cut(s) 565, 766, 1213, 1279, 1393
PvuII CAGCTG 1 cut(s) 1733
RsaI GTAC 6 cut(s) 61, 81, 576, 632, 1350, 1426
RsaNI GTAC 6 cut(s) 60, 80, 575, 631, 1349, 1425
RseI CAYNNNNRTG 3 cut(s) 444, 916, 922
SaqAI TTAA 3 cut(s) 468, 783, 1082
SatI GCNGC 4 cut(s) 277, 345, 522, 988
Sau96I GGNCC 3 cut(s) 129, 875, 978
ScaI AGTACT 1 cut(s) 1350
ScrFI CCNGG 7 cut(s) 84, 258, 462, 517, 543, 666, 1195
SfaNI GCATC 2 cut(s) 344, 1147
SfcI CTRYAG 1 cut(s) 771
SfoI GGCGCC 1 cut(s) 506
Sfr274I CTCGAG 1 cut(s) 1769
SinI GGWCC 3 cut(s) 129, 875, 978
SlaI CTCGAG 1 cut(s) 1769
SmiMI CAYNNNNRTG 3 cut(s) 444, 916, 922
SmlI CTYRAG 2 cut(s) 1341, 1769
SmoI CTYRAG 2 cut(s) 1341, 1769
SseBI AGGCCT 1 cut(s) 587
SsiI CCGC 4 cut(s) 675, 873, 965, 1637
SspDI GGCGCC 1 cut(s) 504
SspI AATATT 1 cut(s) 1177
SspMI CTAG 7 cut(s) 309, 377, 807, 827, 1217, 1277, 1371
StuI AGGCCT 1 cut(s) 587
StyD4I CCNGG 7 cut(s) 82, 256, 460, 515, 541, 664, 1193
StyI CCWWGG 2 cut(s) 124, 181
TaaI ACNGT 4 cut(s) 90, 728, 854, 1130
TaiI ACGT 2 cut(s) 818, 1653
TaqI TCGA 4 cut(s) 435, 1738, 1770, 1891
TatI WGTACW 2 cut(s) 630, 1348
TfiI GAWTC 7 cut(s) 192, 239, 251, 358, 1109, 1675, 1759
Tru1I TTAA 3 cut(s) 468, 783, 1082
Tru9I TTAA 3 cut(s) 468, 783, 1082
TscAI CASTG 3 cut(s) 36, 733, 988
TseFI GTSAC 3 cut(s) 415, 854, 1867
TseI GCWGC 4 cut(s) 276, 344, 521, 987
Tsp45I GTSAC 3 cut(s) 415, 854, 1867
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 3 cut(s) 36, 733, 988
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 3 cut(s) 129, 875, 978
XapI RAATTY 6 cut(s) 163, 200, 802, 832, 1464, 1831
XbaI TCTAGA 2 cut(s) 1216, 1370
XceI RCATGY 4 cut(s) 1014, 1188, 1528, 1671
XhoI CTCGAG 1 cut(s) 1769
XspI CTAG 7 cut(s) 309, 377, 807, 827, 1217, 1277, 1371
ZrmI AGTACT 1 cut(s) 1350
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.