pycom09g01960

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1447227 .. 1448337
1111 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g01960.4

Sequence Viewer

Length: 753 bp
ATGATATTGATCTACGAATACATGCCCAATCGGAGCTTGGACAAACTTTTGTTTGATGCATCTGAAAAAAGAGAATTAGATTGGGGAAGACGTTTTCGAATTATAGAAGGCATTGCTCAAGGAGTACTTTATATCCACAAGTACTCTAGATTGAAAATCATCCATAGGGATCTAAAAGCAAGTAACATACTGTTGGATGGAGCCTTGAACCCCAAAATTTCAGACTTTGGAATGGCAAGGATTTTCGGGATACACCAGACTGAAGCAAATACCAATAGGGTTGTTGGCACATACGGTTACATGTCACCCGAATATGCGAGATATGGTTATTTCTCTGAGAAATTAGATGTATTCAGCTTTGGAGTGTTATTGTTGGAGATTGTAAGCGGAAAGAAGAATGCTGCTTTTTATCGCTTTGAACATTCACCAACTCTTGCTGGATGGGCATGGGAGCTGTGGAAAGAAGGAAGAGGAATGGAGGTGATCGATGAATCGGTAAGGGAAACGTGCCACCTCGATGAAGCCATGAAGTGTATCTATGTAGGGTTTTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCTTCGGTAATTCGTATGTTGCAGGGCAATGAATCTACATCTCTTCCACCTTCCAAAGAACCTGCCTTTTCAACATACAGAAATTCCAATCATGTTCGCCCTTCTGAAAAGCCTACCAGTTTATCCCACAACGCAGTCACCATGAGTTTTCCAGAAGGTCGATAG

Protein Analysis

251

Amino Acids

28.59

Weight (kDa)

7.73

Isoelectric Point (pI)

49.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 658
AciI CCGC 1 cut(s) 387
AclWI GGATC 1 cut(s) 177
AcsI RAATTY 2 cut(s) 216, 670
AcuI CTGAAG 1 cut(s) 282
AfaI GTAC 2 cut(s) 126, 143
AflIII ACRYGT 1 cut(s) 300
AgsI TTSAA 5 cut(s) 154, 208, 419, 560, 660
AjuI GAANNNNNNNTTGG 2 cut(s) 574, 606
AluBI AGCT 5 cut(s) 36, 357, 454, 566, 572
AluI AGCT 5 cut(s) 36, 357, 454, 566, 572
AlwI GGATC 1 cut(s) 177
ApeKI GCWGC 1 cut(s) 401
ApoI RAATTY 2 cut(s) 216, 670
AsuHPI GGTGA 4 cut(s) 297, 417, 493, 718
AsuII TTCGAA 1 cut(s) 97
BbsI GAAGAC 2 cut(s) 94, 582
BbvI GCAGC 1 cut(s) 388
BccI CCATC 2 cut(s) 191, 435
BciVI GTATCC 1 cut(s) 243
BfaI CTAG 1 cut(s) 147
BfuAI ACCTGC 1 cut(s) 658
BfuI GTATCC 1 cut(s) 243
BisI GCNGC 1 cut(s) 402
BlsI GCNGC 1 cut(s) 403
BmcAI AGTACT 2 cut(s) 126, 143
BmiI GGNNCC 1 cut(s) 202
BmsI GCATC 2 cut(s) 46, 68
BpiI GAAGAC 2 cut(s) 94, 582
BpmI CTGGAG 1 cut(s) 552
Bpu14I TTCGAA 1 cut(s) 97
BpuEI CTTGAG 1 cut(s) 102
Bsa29I ATCGAT 1 cut(s) 486
BsaBI GATNNNNATC 1 cut(s) 8
Bse1I ACTGG 1 cut(s) 705
Bse3DI GCAATG 2 cut(s) 111, 622
Bse8I GATNNNNATC 1 cut(s) 8
BseCI ATCGAT 1 cut(s) 486
BseGI GGATG 3 cut(s) 159, 202, 446
BseJI GATNNNNATC 1 cut(s) 8
BseMI GCAATG 2 cut(s) 111, 622
BseMII CTCAG 1 cut(s) 327
BseNI ACTGG 1 cut(s) 705
BseXI GCAGC 1 cut(s) 388
BshVI ATCGAT 1 cut(s) 486
BsmI GAATGC 1 cut(s) 403
Bsp119I TTCGAA 1 cut(s) 97
Bsp143I GATC 4 cut(s) 9, 169, 483, 574
BspACI CCGC 1 cut(s) 387
BspCNI CTCAG 1 cut(s) 328
BspDI ATCGAT 1 cut(s) 486
BspLI GGNNCC 1 cut(s) 202
BspMI ACCTGC 1 cut(s) 658
BspPI GGATC 1 cut(s) 177
BspT104I TTCGAA 1 cut(s) 97
BsrDI GCAATG 2 cut(s) 111, 622
BsrI ACTGG 1 cut(s) 705
BssMI GATC 4 cut(s) 9, 169, 483, 574
Bst4CI ACNGT 2 cut(s) 192, 296
Bst6I CTCTTC 2 cut(s) 463, 636
BstBI TTCGAA 1 cut(s) 97
BstDEI CTNAG 1 cut(s) 336
BstF5I GGATG 3 cut(s) 159, 202, 446
BstKTI GATC 4 cut(s) 12, 172, 486, 577
BstMBI GATC 4 cut(s) 9, 169, 483, 574
BstMWI GCNNNNNNNGC 1 cut(s) 443
BstNSI RCATGY 2 cut(s) 25, 304
BstV1I GCAGC 1 cut(s) 388
BstV2I GAAGAC 2 cut(s) 94, 582
BstX2I RGATCY 1 cut(s) 169
BstYI RGATCY 1 cut(s) 169
Bsu15I ATCGAT 1 cut(s) 486
BsuI GTATCC 1 cut(s) 243
BsuTUI ATCGAT 1 cut(s) 486
BtsCI GGATG 3 cut(s) 159, 202, 446
BveI ACCTGC 1 cut(s) 658
ClaI ATCGAT 1 cut(s) 486
Csp6I GTAC 2 cut(s) 125, 142
CviAII CATG 6 cut(s) 22, 301, 447, 526, 680, 730
CviJI RGCY 8 cut(s) 36, 203, 357, 454, 524, 566, 572, 700
CviKI_1 RGCY 8 cut(s) 36, 203, 357, 454, 524, 566, 572, 700
CviQI GTAC 2 cut(s) 125, 142
DdeI CTNAG 1 cut(s) 336
DpnI GATC 4 cut(s) 11, 171, 485, 576
DpnII GATC 4 cut(s) 9, 169, 483, 574
Eam1104I CTCTTC 2 cut(s) 463, 636
EarI CTCTTC 2 cut(s) 463, 636
Eco57I CTGAAG 1 cut(s) 282
EcoT22I ATGCAT 1 cut(s) 61
FaeI CATG 6 cut(s) 25, 304, 450, 529, 683, 733
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FatI CATG 6 cut(s) 21, 300, 446, 525, 679, 729
Fnu4HI GCNGC 1 cut(s) 402
FokI GGATG 3 cut(s) 146, 209, 453
Fsp4HI GCNGC 1 cut(s) 402
FspBI CTAG 1 cut(s) 147
GluI GCNGC 1 cut(s) 402
GsuI CTGGAG 1 cut(s) 552
Hin1II CATG 6 cut(s) 25, 304, 450, 529, 683, 733
HinfI GANTC 2 cut(s) 491, 620
HphI GGTGA 4 cut(s) 297, 417, 493, 718
Hpy188I TCNGA 5 cut(s) 33, 64, 223, 337, 694
Hpy188III TCNNGA 4 cut(s) 147, 247, 560, 740
HpyAV CCTTC 5 cut(s) 101, 458, 648, 699, 737
HpyCH4III ACNGT 2 cut(s) 192, 296
HpyCH4IV ACGT 2 cut(s) 91, 506
HpyCH4V TGCA 2 cut(s) 59, 610
HpyF10VI GCNNNNNNNGC 1 cut(s) 443
HpyF3I CTNAG 1 cut(s) 336
HpySE526I ACGT 2 cut(s) 91, 506
Hsp92II CATG 6 cut(s) 25, 304, 450, 529, 683, 733
Kzo9I GATC 4 cut(s) 9, 169, 483, 574
LmnI GCTCC 4 cut(s) 33, 200, 451, 571
LpnPI CCDG 6 cut(s) 269, 423, 582, 596, 663, 718
Lsp1109I GCAGC 1 cut(s) 388
LweI GCATC 2 cut(s) 46, 68
MaeI CTAG 1 cut(s) 147
MaeII ACGT 2 cut(s) 91, 506
MaeIII GTNAC 4 cut(s) 182, 296, 303, 724
MalI GATC 4 cut(s) 11, 171, 485, 576
MboI GATC 4 cut(s) 9, 169, 483, 574
MboII GAAGA 5 cut(s) 99, 406, 480, 582, 623
MflI RGATCY 1 cut(s) 169
MluCI AATT 6 cut(s) 74, 99, 216, 341, 597, 670
MmeI TCCRAC 2 cut(s) 174, 354
MnlI CCTC 3 cut(s) 464, 472, 524
Mph1103I ATGCAT 1 cut(s) 61
MslI CAYNNNNRTG 1 cut(s) 516
MspA1I CMGCKG 1 cut(s) 572
Mva1269I GAATGC 1 cut(s) 403
MwoI GCNNNNNNNGC 1 cut(s) 443
NdeII GATC 4 cut(s) 9, 169, 483, 574
NlaIII CATG 6 cut(s) 25, 304, 450, 529, 683, 733
NlaIV GGNNCC 1 cut(s) 202
NmuCI GTSAC 2 cut(s) 303, 724
NsiI ATGCAT 1 cut(s) 61
NspI RCATGY 2 cut(s) 25, 304
NspV TTCGAA 1 cut(s) 97
PciI ACATGT 1 cut(s) 300
PctI GAATGC 1 cut(s) 403
PfeI GAWTC 2 cut(s) 491, 620
PkrI GCNGC 1 cut(s) 403
PscI ACATGT 1 cut(s) 300
PspN4I GGNNCC 1 cut(s) 202
PsuI RGATCY 1 cut(s) 169
PvuII CAGCTG 1 cut(s) 572
RsaI GTAC 2 cut(s) 126, 143
RsaNI GTAC 2 cut(s) 125, 142
RseI CAYNNNNRTG 1 cut(s) 516
SatI GCNGC 1 cut(s) 402
Sau3AI GATC 4 cut(s) 9, 169, 483, 574
ScaI AGTACT 2 cut(s) 126, 143
SfaNI GCATC 2 cut(s) 46, 68
SfuI TTCGAA 1 cut(s) 97
SmiMI CAYNNNNRTG 1 cut(s) 516
SmlI CTYRAG 1 cut(s) 117
SmoI CTYRAG 1 cut(s) 117
Sse9I AATT 6 cut(s) 74, 99, 216, 341, 597, 670
SsiI CCGC 1 cut(s) 387
SspMI CTAG 1 cut(s) 147
TaaI ACNGT 2 cut(s) 192, 296
TaiI ACGT 2 cut(s) 94, 509
TaqI TCGA 5 cut(s) 97, 486, 516, 577, 748
TasI AATT 6 cut(s) 74, 99, 216, 341, 597, 670
TatI WGTACW 2 cut(s) 124, 141
TfiI GAWTC 2 cut(s) 491, 620
TseFI GTSAC 2 cut(s) 303, 724
TseI GCWGC 1 cut(s) 401
Tsp45I GTSAC 2 cut(s) 303, 724
TspDTI ATGAA 4 cut(s) 504, 534, 542, 633
XapI RAATTY 2 cut(s) 216, 670
XbaI TCTAGA 1 cut(s) 146
XceI RCATGY 2 cut(s) 25, 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 34
XspI CTAG 1 cut(s) 147
ZrmI AGTACT 2 cut(s) 126, 143
Zsp2I ATGCAT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.