RLG00000014283

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
50350687 .. 50352134
1448 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014283

Sequence Viewer

Length: 831 bp
ATGGGGTTTACCTCCCCCTCAGGTGCAAACAATGTGCGCGCCGATGATGCATATGCTAACTGCAGCCAACCTATTACCTGCGGGAGTGTCAAAAGCAACATCTCTTACCCCTTTTGGGGAGCGAACCGACCCGAATACTGTGGCAAATCTGGGTTCGAGGTCACATGCCAAGACGGTGTCCCGATGATCAGCATGCAGAAAATCAATTTCAGAATTCTTGACATGAGCAGTAGTAGTACTACAGCAACTCCAACTGTGACAGTTGCAAGGGAGGATTATTGGAACACTCTCTGTCCTAAGAGTTATATTGAAACAAACCTCAACTTCTCTCTGTTTGATTACGCATCTGGGCCTCAAAACGTGTCGTTTTACTATGGATGCAGTTCGACTGCAACTTCAGCTTCGTCAGGATATAATTTTTCTAGTATCTCGCAGCAATGCAACGCTACCGTCACAGTTTCATTTCTCACAGAGAAGCAAACTGCTAAGCTTCCGGATGCAACTACCTCGGGCTCCTGTCAAGCTGTGGTTTTGGTTCCGGTGTCTGCGGCAGCTGCTGATGCGCTTGACAACAATCAAACATCAACCATCCAGAATGCGGTAGATGGTGGTTTTGAATTGAACGTGCAGAATGATGATACTGGTCTTTGCAACAATTGCGTGGCCTCAGGAGGACTTTGTGGGCAAAACACTACTAATGCTCAGTTCATTTGCTATTGCTCGAATTTAAATTCAAAAGGCATATGTACTTCAAATTCATCCGGTTCATCATCAGGTATCAATAATACGCTCTCTCTACCTATCAATATATATTATTATGAGGAGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

277

Amino Acids

29.22

Weight (kDa)

4.31

Isoelectric Point (pI)

36.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 21 - 81 1.8e-14 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 154 - 242 2.8e-16 Wall-associated receptor kinase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 86
AccII CGCG 1 cut(s) 39
AccIII TCCGGA 1 cut(s) 493
AciI CCGC 3 cut(s) 81, 548, 599
AcsI RAATTY 4 cut(s) 213, 724, 730, 754
AcuI CTGAAG 1 cut(s) 381
AfaI GTAC 2 cut(s) 238, 748
AfiI CCNNNNNNNGG 3 cut(s) 115, 116, 598
AflIII ACRYGT 1 cut(s) 360
AgsI TTSAA 5 cut(s) 311, 617, 622, 735, 753
AluBI AGCT 4 cut(s) 401, 490, 524, 554
AluI AGCT 4 cut(s) 401, 490, 524, 554
AlwNI CAGNNNCTG 1 cut(s) 557
Ama87I CYCGRG 1 cut(s) 508
Aor13HI TCCGGA 1 cut(s) 493
AoxI GGCC 2 cut(s) 350, 663
ApeKI GCWGC 4 cut(s) 63, 433, 551, 554
ApoI RAATTY 4 cut(s) 213, 724, 730, 754
AspLEI GCGC 3 cut(s) 39, 41, 565
AspS9I GGNCC 1 cut(s) 350
AvaI CYCGRG 1 cut(s) 508
AxyI CCTNAGG 2 cut(s) 19, 667
BanII GRGCYC 1 cut(s) 515
BbvI GCAGC 4 cut(s) 75, 445, 541, 563
BccI CCATC 2 cut(s) 596, 599
BcgI CGANNNNNNTGC 2 cut(s) 489, 523
BclI TGATCA 1 cut(s) 186
BfaI CTAG 1 cut(s) 423
BfmI CTRYAG 2 cut(s) 61, 240
BfuAI ACCTGC 1 cut(s) 86
BisI GCNGC 5 cut(s) 64, 434, 549, 552, 555
BlpI GCTNAGC 1 cut(s) 486
BlsI GCNGC 5 cut(s) 65, 435, 550, 553, 556
BmcAI AGTACT 1 cut(s) 238
BmeT110I CYCGRG 1 cut(s) 508
BmgT120I GGNCC 1 cut(s) 350
BmiI GGNNCC 2 cut(s) 514, 537
BmsI GCATC 5 cut(s) 37, 353, 368, 487, 550
Bpu1102I GCTNAGC 1 cut(s) 486
BsaJI CCNNGG 1 cut(s) 507
BsaWI WCCGGW 3 cut(s) 493, 538, 761
BsaXI ACNNNNNCTCC 2 cut(s) 232, 262
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 116, 598
Bse1I ACTGG 1 cut(s) 646
Bse21I CCTNAGG 2 cut(s) 19, 667
Bse3DI GCAATG 1 cut(s) 443
BseAI TCCGGA 1 cut(s) 493
BseDI CCNNGG 1 cut(s) 507
BseGI GGATG 4 cut(s) 383, 502, 588, 758
BseLI CCNNNNNNNGG 3 cut(s) 115, 116, 598
BseMI GCAATG 1 cut(s) 443
BseMII CTCAG 3 cut(s) 33, 681, 716
BseNI ACTGG 1 cut(s) 646
BsePI GCGCGC 1 cut(s) 37
BseXI GCAGC 4 cut(s) 75, 445, 541, 563
BsgI GTGCAG 1 cut(s) 647
Bsh1236I CGCG 1 cut(s) 39
BshFI GGCC 2 cut(s) 352, 665
BsiHKCI CYCGRG 1 cut(s) 508
BsiSI CCGG 3 cut(s) 494, 539, 762
BslFI GGGAC 1 cut(s) 164
BslI CCNNNNNNNGG 3 cut(s) 115, 116, 598
BsmFI GGGAC 1 cut(s) 164
BsmI GAATGC 1 cut(s) 601
BsnI GGCC 2 cut(s) 352, 665
BsoBI CYCGRG 1 cut(s) 508
Bsp1286I GDGCHC 1 cut(s) 515
Bsp13I TCCGGA 1 cut(s) 493
Bsp143I GATC 1 cut(s) 186
Bsp1720I GCTNAGC 1 cut(s) 486
BspACI CCGC 3 cut(s) 81, 548, 599
BspANI GGCC 2 cut(s) 352, 665
BspCNI CTCAG 3 cut(s) 32, 680, 715
BspEI TCCGGA 1 cut(s) 493
BspFNI CGCG 1 cut(s) 39
BspLI GGNNCC 2 cut(s) 514, 537
BspMAI CTGCAG 1 cut(s) 65
BspMI ACCTGC 1 cut(s) 86
BsrDI GCAATG 1 cut(s) 443
BsrI ACTGG 1 cut(s) 646
BssECI CCNNGG 1 cut(s) 507
BssHII GCGCGC 1 cut(s) 37
BssMI GATC 1 cut(s) 186
Bst4CI ACNGT 6 cut(s) 140, 176, 256, 262, 451, 457
BstAPI GCANNNNNTGC 1 cut(s) 657
BstC8I GCNNGC 2 cut(s) 39, 194
BstDEI CTNAG 5 cut(s) 19, 297, 486, 667, 702
BstF5I GGATG 4 cut(s) 383, 502, 588, 758
BstFNI CGCG 1 cut(s) 39
BstHHI GCGC 3 cut(s) 39, 41, 565
BstKTI GATC 1 cut(s) 189
BstMBI GATC 1 cut(s) 186
BstMWI GCNNNNNNNGC 5 cut(s) 47, 398, 554, 560, 657
BstNSI RCATGY 2 cut(s) 168, 196
BstSFI CTRYAG 2 cut(s) 61, 240
BstUI CGCG 1 cut(s) 39
BstV1I GCAGC 4 cut(s) 75, 445, 541, 563
Bsu36I CCTNAGG 2 cut(s) 19, 667
BsuRI GGCC 2 cut(s) 352, 665
BtsCI GGATG 4 cut(s) 383, 502, 588, 758
BveI ACCTGC 1 cut(s) 86
Cac8I GCNNGC 2 cut(s) 39, 194
CaiI CAGNNNCTG 1 cut(s) 557
CfoI GCGC 3 cut(s) 39, 41, 565
Cfr13I GGNCC 1 cut(s) 350
Csp6I GTAC 2 cut(s) 237, 747
CviAII CATG 3 cut(s) 165, 193, 223
CviJI RGCY 8 cut(s) 66, 352, 401, 490, 513, 524, 554, 665
CviKI_1 RGCY 8 cut(s) 66, 352, 401, 490, 513, 524, 554, 665
CviQI GTAC 2 cut(s) 237, 747
DdeI CTNAG 5 cut(s) 19, 297, 486, 667, 702
DpnI GATC 1 cut(s) 188
DpnII GATC 1 cut(s) 186
DraI TTTAAA 1 cut(s) 729
Eco24I GRGCYC 1 cut(s) 515
Eco57I CTGAAG 1 cut(s) 381
Eco81I CCTNAGG 2 cut(s) 19, 667
Eco88I CYCGRG 1 cut(s) 508
EcoRI GAATTC 1 cut(s) 213
EcoT22I ATGCAT 1 cut(s) 52
EcoT38I GRGCYC 1 cut(s) 515
FaeI CATG 3 cut(s) 168, 196, 226
FaqI GGGAC 1 cut(s) 164
FatI CATG 3 cut(s) 164, 192, 222
FauI CCCGC 1 cut(s) 74
FauNDI CATATG 2 cut(s) 52, 743
FbaI TGATCA 1 cut(s) 186
Fnu4HI GCNGC 5 cut(s) 64, 434, 549, 552, 555
FokI GGATG 4 cut(s) 390, 509, 575, 745
FriOI GRGCYC 1 cut(s) 515
Fsp4HI GCNGC 5 cut(s) 64, 434, 549, 552, 555
FspBI CTAG 1 cut(s) 423
GlaI GCGC 3 cut(s) 38, 40, 564
GluI GCNGC 5 cut(s) 64, 434, 549, 552, 555
HaeIII GGCC 2 cut(s) 352, 665
HapII CCGG 3 cut(s) 494, 539, 762
HhaI GCGC 3 cut(s) 39, 41, 565
Hin1II CATG 3 cut(s) 168, 196, 226
Hin6I GCGC 3 cut(s) 37, 39, 563
HinP1I GCGC 3 cut(s) 37, 39, 563
HindIII AAGCTT 1 cut(s) 488
HpaII CCGG 3 cut(s) 494, 539, 762
Hpy166II GTNNAC 1 cut(s) 9
Hpy188I TCNGA 1 cut(s) 212
Hpy188III TCNNGA 6 cut(s) 181, 218, 408, 494, 592, 669
Hpy8I GTNNAC 1 cut(s) 9
HpyCH4III ACNGT 6 cut(s) 140, 176, 256, 262, 451, 457
HpyCH4IV ACGT 2 cut(s) 360, 624
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 398, 554, 560, 657
HpyF3I CTNAG 5 cut(s) 19, 297, 486, 667, 702
HpySE526I ACGT 2 cut(s) 360, 624
Hsp92II CATG 3 cut(s) 168, 196, 226
HspAI GCGC 3 cut(s) 37, 39, 563
Kpn2I TCCGGA 1 cut(s) 493
Ksp22I TGATCA 1 cut(s) 186
Kzo9I GATC 1 cut(s) 186
LmnI GCTCC 2 cut(s) 119, 518
Lsp1109I GCAGC 4 cut(s) 75, 445, 541, 563
LweI GCATC 5 cut(s) 37, 353, 368, 487, 550
MaeI CTAG 1 cut(s) 423
MaeII ACGT 2 cut(s) 360, 624
MaeIII GTNAC 3 cut(s) 160, 256, 451
MalI GATC 1 cut(s) 188
MboI GATC 1 cut(s) 186
MfeI CAATTG 1 cut(s) 655
MhlI GDGCHC 1 cut(s) 515
MluCI AATT 8 cut(s) 205, 213, 415, 617, 655, 724, 730, 754
MmeI TCCRAC 1 cut(s) 275
Mph1103I ATGCAT 1 cut(s) 52
MroI TCCGGA 1 cut(s) 493
MseI TTAA 1 cut(s) 728
MspA1I CMGCKG 1 cut(s) 554
MspI CCGG 3 cut(s) 494, 539, 762
MunI CAATTG 1 cut(s) 655
Mva1269I GAATGC 1 cut(s) 601
MvnI CGCG 1 cut(s) 39
MwoI GCNNNNNNNGC 5 cut(s) 47, 398, 554, 560, 657
NdeI CATATG 2 cut(s) 52, 743
NdeII GATC 1 cut(s) 186
NlaIII CATG 3 cut(s) 168, 196, 226
NlaIV GGNNCC 2 cut(s) 514, 537
NmuCI GTSAC 3 cut(s) 160, 256, 451
NsiI ATGCAT 1 cut(s) 52
NspI RCATGY 2 cut(s) 168, 196
PaeI GCATGC 1 cut(s) 196
PauI GCGCGC 1 cut(s) 37
PctI GAATGC 1 cut(s) 601
PflFI GACNNNGTC 1 cut(s) 176
PkrI GCNGC 5 cut(s) 65, 435, 550, 553, 556
PspN4I GGNNCC 2 cut(s) 514, 537
PspPI GGNCC 1 cut(s) 350
PstI CTGCAG 1 cut(s) 65
PstNI CAGNNNCTG 1 cut(s) 557
PsyI GACNNNGTC 1 cut(s) 176
PteI GCGCGC 1 cut(s) 37
PvuII CAGCTG 1 cut(s) 554
RsaI GTAC 2 cut(s) 238, 748
RsaNI GTAC 2 cut(s) 237, 747
SaqAI TTAA 1 cut(s) 728
SatI GCNGC 5 cut(s) 64, 434, 549, 552, 555
Sau3AI GATC 1 cut(s) 186
Sau96I GGNCC 1 cut(s) 350
ScaI AGTACT 1 cut(s) 238
SduI GDGCHC 1 cut(s) 515
SfaNI GCATC 5 cut(s) 37, 353, 368, 487, 550
SfcI CTRYAG 2 cut(s) 61, 240
SmiI ATTTAAAT 1 cut(s) 729
SphI GCATGC 1 cut(s) 196
Sse9I AATT 8 cut(s) 205, 213, 415, 617, 655, 724, 730, 754
SsiI CCGC 3 cut(s) 81, 548, 599
SspMI CTAG 1 cut(s) 423
SwaI ATTTAAAT 1 cut(s) 729
TaaI ACNGT 6 cut(s) 140, 176, 256, 262, 451, 457
TaiI ACGT 2 cut(s) 363, 627
TaqI TCGA 3 cut(s) 156, 386, 722
TasI AATT 8 cut(s) 205, 213, 415, 617, 655, 724, 730, 754
TatI WGTACW 2 cut(s) 236, 746
TauI GCSGC 1 cut(s) 551
Tru1I TTAA 1 cut(s) 728
Tru9I TTAA 1 cut(s) 728
TseFI GTSAC 3 cut(s) 160, 256, 451
TseI GCWGC 4 cut(s) 63, 433, 551, 554
Tsp45I GTSAC 3 cut(s) 160, 256, 451
TspDTI ATGAA 4 cut(s) 450, 697, 747, 756
Tth111I GACNNNGTC 1 cut(s) 176
XapI RAATTY 4 cut(s) 213, 724, 730, 754
XceI RCATGY 2 cut(s) 168, 196
XspI CTAG 1 cut(s) 423
ZrmI AGTACT 1 cut(s) 238
Zsp2I ATGCAT 1 cut(s) 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.