Rroxscaffold_7G00203540

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000114
Physical Location & Seq
Reverse (-)
52436027 .. 52439239
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00203540.1

Sequence Viewer

Length: 1428 bp
ATGAACAATGTCAATTTCAGAATTCTTGCCATGAGCAATAGTAGTACTTCAACAACTCCTACTGTAAACGTTGCTAGGGATGATTACTGGGAAACTATCTGTCCCTCGACATATAATCCCACAGAGCTCGACTTCTCTCTCTTCACTTACTCTTCTGGGCTTCTGAACGTGTCTTTTTGGTACGGATGCAATGCAACCGTAACAACCGTAACAATCACAGGGAATTCGCATTTCTGCAACAGTAGCGTCACTGCTGTCTATCTCACACAGACGAGAGCTAGTACTATTGTCCCAATTGATCCAGTTACTACGGGCGCCTGTCAATATAGGGTTTTGGTTCCGGTATTTGAATCCGCTTCTGCGGCTCTGGACAGCAATACTACAGATATTGAGAGTGCGATAGATGGTGGTTTTGAATTGGATGTGGTAAATGCTGATACTGGCCTGTGCGACAATTGCTTGGCATCAGGGGGAGTTTGTGGGCAAAGCACTACTGGTGCCAACGAATTCATGTGCTTTTGCCAGACTACTTCATCTTCGACAACCACATGTACTGAAAGCTCTTCACCATCTCCAAATCCAGCTCCATCCAATTCAGTACCTCAACTGCAGCCAATCGTTCGAGTGTGCAAGTATCGGGAGCATCGGTTACCCTTTCTGGGGATCAAACCCACCCGATTACTGTGGCTCCCGGAGTTCAAGTTGAACTGCAGCGGCGACGCCCCGTCCATCTCAATCCAGGAACAAGAGTTTCGAGTCCTTTCTATCAATCAGAGTCAAAGCAGTTTCACAATTGCTAGAGCCGATTACTGGAACAACGTTTGTCCGGTGTCCCTTACCAATACCACCACACAGGATATTTATAGTATTGACCGCTGTGAATCAATTTGCTTAAATGATTGCCATTGCACTGCTTATGGTTATAGCAGCTCTTCTTCTGAATGTTCAACTTGGAAAGGAGATCTGTGGGCGGATGAAAATGGAAGAACTTTACACATTAGACTAGCAGCTTCTGATTATAAGAATCTAAAAAGTAGAAAGCGAACCATTGTAATCGCAACAGTCTCAGCAACAGCAGGGTTGCTTGCTATAGTTTTTGGCTATTTTTTATGGAAGAAAACACTGGGAAAGAGAAGTGAAACTATAAAGTATCTTAGTGCTGCTGGTGTGGAGAATGATACAGAACTACCACTATTCAGTTTGAGGAGTATGTTAGTAGCTACTAATAACTTCTCTGAAGCGAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAAAGGCTATCAAAGAAGTCCGGACAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCGAAGCTCCAACATACCAACCTTGTTAGACTCTTGGGTTGCTGCACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

475

Amino Acids

51.84

Weight (kDa)

5.68

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAK_assoc PF14380 102 - 175 6.3e-12 Wall-associated receptor kinase C-terminal
PAN_2 PF08276 272 - 322 6.9e-08 PAN-like domain
Pkinase PF00069 412 - 474 6.9e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 414 - 475 3.5e-12 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1020, 1278
AccB1I GGYRCC 2 cut(s) 314, 497
AccIII TCCGGA 1 cut(s) 1334
AciI CCGC 5 cut(s) 354, 362, 714, 874, 971
AclI AACGTT 2 cut(s) 69, 819
AclWI GGATC 2 cut(s) 293, 671
AcsI RAATTY 3 cut(s) 21, 223, 506
AcuI CTGAAG 1 cut(s) 1257
AcyI GRCGYC 2 cut(s) 315, 720
AfaI GTAC 5 cut(s) 46, 182, 283, 553, 600
AfiI CCNNNNNNNGG 4 cut(s) 659, 660, 810, 1317
AflIII ACRYGT 2 cut(s) 168, 548
AgsI TTSAA 6 cut(s) 51, 350, 416, 700, 706, 948
AhdI GACNNNNNGTC 1 cut(s) 724
AjnI CCWGG 1 cut(s) 738
AluBI AGCT 9 cut(s) 127, 278, 561, 584, 930, 1010, 1220, 1372, 1384
AluI AGCT 9 cut(s) 127, 278, 561, 584, 930, 1010, 1220, 1372, 1384
Alw21I GWGCWC 1 cut(s) 129
Alw26I GTCTC 1 cut(s) 1069
AlwI GGATC 2 cut(s) 293, 671
AlwNI CAGNNNCTG 1 cut(s) 1013
Aor13HI TCCGGA 1 cut(s) 1334
AoxI GGCC 2 cut(s) 442, 1267
ApeKI GCWGC 6 cut(s) 610, 711, 927, 1007, 1160, 1419
ApoI RAATTY 3 cut(s) 21, 223, 506
AspLEI GCGC 1 cut(s) 317
AspS9I GGNCC 1 cut(s) 1268
AsuC2I CCSGG 1 cut(s) 692
AsuHPI GGTGA 1 cut(s) 558
BanI GGYRCC 2 cut(s) 314, 497
BanII GRGCYC 1 cut(s) 129
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 6 cut(s) 622, 723, 939, 1019, 1147, 1406
BccI CCATC 4 cut(s) 398, 577, 595, 737
BciT130I CCWGG 1 cut(s) 740
BcnI CCSGG 1 cut(s) 692
BcoDI GTCTC 1 cut(s) 1069
BfaI CTAG 5 cut(s) 75, 279, 798, 1004, 1250
BfmI CTRYAG 4 cut(s) 381, 608, 709, 1089
BfoI RGCGCY 1 cut(s) 318
BglII AGATCT 1 cut(s) 961
BisI GCNGC 8 cut(s) 363, 611, 712, 715, 928, 1008, 1161, 1420
BlsI GCNGC 8 cut(s) 364, 612, 713, 716, 929, 1009, 1162, 1421
BmcAI AGTACT 2 cut(s) 46, 283
Bme1390I CCNGG 2 cut(s) 692, 740
BmeRI GACNNNNNGTC 1 cut(s) 724
BmgT120I GGNCC 1 cut(s) 1268
BmiI GGNNCC 4 cut(s) 316, 339, 499, 689
BmrFI CCNGG 2 cut(s) 692, 740
BmrI ACTGGG 2 cut(s) 97, 1133
BmsI GCATC 3 cut(s) 176, 473, 652
BmuI ACTGGG 2 cut(s) 97, 1133
BpuMI CCSGG 1 cut(s) 692
BsaHI GRCGYC 2 cut(s) 315, 720
BsaWI WCCGGW 3 cut(s) 340, 826, 1334
BsaXI ACNNNNNCTCC 6 cut(s) 632, 662, 672, 686, 702, 716
Bsc4I CCNNNNNNNGG 4 cut(s) 659, 660, 810, 1317
Bse1I ACTGG 6 cut(s) 92, 302, 445, 499, 815, 1128
Bse3DI GCAATG 2 cut(s) 196, 904
BseAI TCCGGA 1 cut(s) 1334
BseBI CCWGG 1 cut(s) 740
BseGI GGATG 5 cut(s) 85, 191, 427, 587, 979
BseLI CCNNNNNNNGG 4 cut(s) 659, 660, 810, 1317
BseMI GCAATG 2 cut(s) 196, 904
BseMII CTCAG 1 cut(s) 1080
BseNI ACTGG 6 cut(s) 92, 302, 445, 499, 815, 1128
BseRI GAGGAG 1 cut(s) 1219
BseXI GCAGC 6 cut(s) 622, 723, 939, 1019, 1147, 1406
BsgI GTGCAG 1 cut(s) 1405
BshFI GGCC 2 cut(s) 444, 1269
BshNI GGYRCC 2 cut(s) 314, 497
BsiHKAI GWGCWC 1 cut(s) 129
BsiSI CCGG 4 cut(s) 341, 692, 827, 1335
BslFI GGGAC 3 cut(s) 87, 275, 817
BslI CCNNNNNNNGG 4 cut(s) 659, 660, 810, 1317
BsmAI GTCTC 1 cut(s) 1069
BsmFI GGGAC 3 cut(s) 87, 275, 817
BsnI GGCC 2 cut(s) 444, 1269
Bsp1286I GDGCHC 1 cut(s) 129
Bsp13I TCCGGA 1 cut(s) 1334
Bsp143I GATC 3 cut(s) 298, 663, 961
BspACI CCGC 5 cut(s) 354, 362, 714, 874, 971
BspANI GGCC 2 cut(s) 444, 1269
BspCNI CTCAG 1 cut(s) 1079
BspEI TCCGGA 1 cut(s) 1334
BspHI TCATGA 1 cut(s) 1356
BspLI GGNNCC 4 cut(s) 316, 339, 499, 689
BspMAI CTGCAG 2 cut(s) 612, 713
BspPI GGATC 2 cut(s) 293, 671
BspQI GCTCTTC 2 cut(s) 568, 937
BspT107I GGYRCC 2 cut(s) 314, 497
BsrDI GCAATG 2 cut(s) 196, 904
BsrI ACTGG 6 cut(s) 92, 302, 445, 499, 815, 1128
BssMI GATC 3 cut(s) 298, 663, 961
BssNI GRCGYC 2 cut(s) 315, 720
Bst2UI CCWGG 1 cut(s) 740
Bst4CI ACNGT 6 cut(s) 64, 199, 208, 242, 684, 1063
Bst6I CTCTTC 4 cut(s) 146, 157, 568, 937
BstACI GRCGYC 2 cut(s) 315, 720
BstC8I GCNNGC 1 cut(s) 1086
BstDEI CTNAG 2 cut(s) 1066, 1154
BstEII GGTNACC 1 cut(s) 648
BstF5I GGATG 5 cut(s) 85, 191, 427, 587, 979
BstH2I RGCGCY 1 cut(s) 318
BstHHI GCGC 1 cut(s) 317
BstKTI GATC 3 cut(s) 301, 666, 964
BstMAI GTCTC 1 cut(s) 1069
BstMBI GATC 3 cut(s) 298, 663, 961
BstMWI GCNNNNNNNGC 3 cut(s) 243, 362, 456
BstNI CCWGG 1 cut(s) 740
BstNSI RCATGY 1 cut(s) 552
BstPI GGTNACC 1 cut(s) 648
BstSCI CCNGG 2 cut(s) 690, 738
BstSFI CTRYAG 4 cut(s) 381, 608, 709, 1089
BstV1I GCAGC 6 cut(s) 622, 723, 939, 1019, 1147, 1406
BstX2I RGATCY 1 cut(s) 961
BstYI RGATCY 1 cut(s) 961
BsuRI GGCC 2 cut(s) 444, 1269
BtsCI GGATG 5 cut(s) 85, 191, 427, 587, 979
BtsI GCAGTG 2 cut(s) 249, 909
BtsIMutI CAGTG 3 cut(s) 249, 909, 1121
Cac8I GCNNGC 1 cut(s) 1086
CaiI CAGNNNCTG 1 cut(s) 1013
CciI TCATGA 1 cut(s) 1356
CfoI GCGC 1 cut(s) 317
Cfr13I GGNCC 1 cut(s) 1268
CseI GACGC 2 cut(s) 235, 728
Csp6I GTAC 5 cut(s) 45, 181, 282, 552, 599
CviAII CATG 4 cut(s) 31, 511, 549, 1357
CviQI GTAC 5 cut(s) 45, 181, 282, 552, 599
DdeI CTNAG 2 cut(s) 1066, 1154
DinI GGCGCC 1 cut(s) 316
DpnI GATC 3 cut(s) 300, 665, 963
DpnII GATC 3 cut(s) 298, 663, 961
DriI GACNNNNNGTC 1 cut(s) 724
Eam1104I CTCTTC 4 cut(s) 146, 157, 568, 937
Eam1105I GACNNNNNGTC 1 cut(s) 724
EarI CTCTTC 4 cut(s) 146, 157, 568, 937
EciI GGCGGA 1 cut(s) 986
Ecl136II GAGCTC 1 cut(s) 127
Eco24I GRGCYC 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 1257
Eco91I GGTNACC 1 cut(s) 648
EcoICRI GAGCTC 1 cut(s) 127
EcoO65I GGTNACC 1 cut(s) 648
EcoRI GAATTC 3 cut(s) 21, 223, 506
EcoRII CCWGG 1 cut(s) 738
EcoT38I GRGCYC 1 cut(s) 129
EgeI GGCGCC 1 cut(s) 316
EheI GGCGCC 1 cut(s) 316
FaeI CATG 4 cut(s) 34, 514, 552, 1360
FaqI GGGAC 3 cut(s) 87, 275, 817
FatI CATG 4 cut(s) 30, 510, 548, 1356
Fnu4HI GCNGC 8 cut(s) 363, 611, 712, 715, 928, 1008, 1161, 1420
FokI GGATG 5 cut(s) 92, 198, 434, 574, 986
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 8 cut(s) 363, 611, 712, 715, 928, 1008, 1161, 1420
FspBI CTAG 5 cut(s) 75, 279, 798, 1004, 1250
GlaI GCGC 1 cut(s) 316
GluI GCNGC 8 cut(s) 363, 611, 712, 715, 928, 1008, 1161, 1420
HaeII RGCGCY 1 cut(s) 318
HaeIII GGCC 2 cut(s) 444, 1269
HapII CCGG 4 cut(s) 341, 692, 827, 1335
HgaI GACGC 2 cut(s) 235, 728
HhaI GCGC 1 cut(s) 317
Hin1I GRCGYC 2 cut(s) 315, 720
Hin1II CATG 4 cut(s) 34, 514, 552, 1360
Hin6I GCGC 1 cut(s) 315
HinP1I GCGC 1 cut(s) 315
HindIII AAGCTT 1 cut(s) 1370
HinfI GANTC 7 cut(s) 350, 756, 775, 881, 1024, 1263, 1407
HpaII CCGG 4 cut(s) 341, 692, 827, 1335
HphI GGTGA 1 cut(s) 558
Hpy166II GTNNAC 1 cut(s) 67
Hpy188I TCNGA 6 cut(s) 20, 165, 774, 940, 1015, 1237
Hpy188III TCNNGA 5 cut(s) 368, 638, 1301, 1335, 1357
Hpy8I GTNNAC 1 cut(s) 67
Hpy99I CGWCG 1 cut(s) 722
HpyCH4III ACNGT 6 cut(s) 64, 199, 208, 242, 684, 1063
HpyCH4IV ACGT 3 cut(s) 69, 168, 819
HpyCH4V TGCA 8 cut(s) 189, 194, 237, 610, 630, 711, 909, 1422
HpyF10VI GCNNNNNNNGC 3 cut(s) 243, 362, 456
HpyF3I CTNAG 2 cut(s) 1066, 1154
HpySE526I ACGT 3 cut(s) 69, 168, 819
Hsp92I GRCGYC 2 cut(s) 315, 720
Hsp92II CATG 4 cut(s) 34, 514, 552, 1360
HspAI GCGC 1 cut(s) 315
KasI GGCGCC 1 cut(s) 314
Kpn2I TCCGGA 1 cut(s) 1334
Kzo9I GATC 3 cut(s) 298, 663, 961
LguI GCTCTTC 2 cut(s) 568, 937
LmnI GCTCC 4 cut(s) 589, 640, 693, 1389
Lsp1109I GCAGC 6 cut(s) 622, 723, 939, 1019, 1147, 1406
LweI GCATC 3 cut(s) 176, 473, 652
MaeI CTAG 5 cut(s) 75, 279, 798, 1004, 1250
MaeII ACGT 3 cut(s) 69, 168, 819
MaeIII GTNAC 5 cut(s) 199, 208, 247, 304, 648
MalI GATC 3 cut(s) 300, 665, 963
MboI GATC 3 cut(s) 298, 663, 961
MboII GAAGA 8 cut(s) 133, 144, 528, 555, 924, 927, 996, 1126
MfeI CAATTG 3 cut(s) 294, 454, 792
MflI RGATCY 1 cut(s) 961
MhlI GDGCHC 1 cut(s) 129
Mly113I GGCGCC 1 cut(s) 315
MlyI GAGTC 3 cut(s) 765, 784, 1401
MmeI TCCRAC 1 cut(s) 1411
MnlI CCTC 5 cut(s) 115, 612, 1197, 1249, 1253
MroI TCCGGA 1 cut(s) 1334
MseI TTAA 2 cut(s) 893, 1367
MspA1I CMGCKG 2 cut(s) 714, 876
MspI CCGG 4 cut(s) 341, 692, 827, 1335
MspR9I CCNGG 2 cut(s) 692, 740
MunI CAATTG 3 cut(s) 294, 454, 792
MvaI CCWGG 1 cut(s) 740
MwoI GCNNNNNNNGC 3 cut(s) 243, 362, 456
NarI GGCGCC 1 cut(s) 315
NciI CCSGG 1 cut(s) 692
NdeII GATC 3 cut(s) 298, 663, 961
NlaIII CATG 4 cut(s) 34, 514, 552, 1360
NlaIV GGNNCC 4 cut(s) 316, 339, 499, 689
NmuCI GTSAC 1 cut(s) 247
NspI RCATGY 1 cut(s) 552
PagI TCATGA 1 cut(s) 1356
PciI ACATGT 1 cut(s) 548
PciSI GCTCTTC 2 cut(s) 568, 937
PfeI GAWTC 4 cut(s) 350, 881, 1024, 1263
PfoI TCCNGGA 2 cut(s) 690, 738
PkrI GCNGC 8 cut(s) 364, 612, 713, 716, 929, 1009, 1162, 1421
PleI GAGTC 3 cut(s) 764, 783, 1401
PluTI GGCGCC 1 cut(s) 318
PpsI GAGTC 3 cut(s) 764, 783, 1401
PscI ACATGT 1 cut(s) 548
PsiI TTATAA 2 cut(s) 1020, 1278
Psp124BI GAGCTC 1 cut(s) 129
Psp1406I AACGTT 2 cut(s) 69, 819
Psp6I CCWGG 1 cut(s) 738
PspEI GGTNACC 1 cut(s) 648
PspGI CCWGG 1 cut(s) 738
PspN4I GGNNCC 4 cut(s) 316, 339, 499, 689
PspPI GGNCC 1 cut(s) 1268
PstI CTGCAG 2 cut(s) 612, 713
PstNI CAGNNNCTG 1 cut(s) 1013
PsuI RGATCY 1 cut(s) 961
RsaI GTAC 5 cut(s) 46, 182, 283, 553, 600
RsaNI GTAC 5 cut(s) 45, 181, 282, 552, 599
SacI GAGCTC 1 cut(s) 129
SapI GCTCTTC 2 cut(s) 568, 937
SaqAI TTAA 2 cut(s) 893, 1367
SatI GCNGC 8 cut(s) 363, 611, 712, 715, 928, 1008, 1161, 1420
Sau3AI GATC 3 cut(s) 298, 663, 961
Sau96I GGNCC 1 cut(s) 1268
ScaI AGTACT 2 cut(s) 46, 283
SchI GAGTC 3 cut(s) 765, 784, 1401
ScrFI CCNGG 2 cut(s) 692, 740
SduI GDGCHC 1 cut(s) 129
SfaNI GCATC 3 cut(s) 176, 473, 652
SfcI CTRYAG 4 cut(s) 381, 608, 709, 1089
SfoI GGCGCC 1 cut(s) 316
SsiI CCGC 5 cut(s) 354, 362, 714, 874, 971
SspDI GGCGCC 1 cut(s) 314
SspMI CTAG 5 cut(s) 75, 279, 798, 1004, 1250
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 2 cut(s) 690, 738
TaaI ACNGT 6 cut(s) 64, 199, 208, 242, 684, 1063
TaiI ACGT 3 cut(s) 72, 171, 822
TaqI TCGA 5 cut(s) 107, 129, 539, 622, 754
TatI WGTACW 3 cut(s) 44, 281, 551
TauI GCSGC 2 cut(s) 365, 717
TfiI GAWTC 4 cut(s) 350, 881, 1024, 1263
Tru1I TTAA 2 cut(s) 893, 1367
Tru9I TTAA 2 cut(s) 893, 1367
TscAI CASTG 3 cut(s) 256, 916, 1128
TseFI GTSAC 1 cut(s) 247
TseI GCWGC 6 cut(s) 610, 711, 927, 1007, 1160, 1419
Tsp45I GTSAC 1 cut(s) 247
TspDTI ATGAA 6 cut(s) 17, 499, 522, 990, 1345, 1373
TspGWI ACGGA 1 cut(s) 198
TspRI CASTG 3 cut(s) 256, 916, 1128
XapI RAATTY 3 cut(s) 21, 223, 506
XceI RCATGY 1 cut(s) 552
XspI CTAG 5 cut(s) 75, 279, 798, 1004, 1250
ZrmI AGTACT 2 cut(s) 46, 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.