Rw4G010820

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000114
Physical Location & Seq
Forward (+)
25302286 .. 25304799
2514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G010820.1

Sequence Viewer

Length: 1686 bp
ATGGACAGGACCAATATATCATGTTGTCAAACCCTATTGTCTCTCTTTGGCATAGGCCTTGCTCAACACCTCAAGGCCACCACTCTTTTCCATCTCCCCAACATAGCAGCCTCAAATTCTTGCCTCCAAAACTACCAGTCCAAGCTTACCTCTCTAGCACTCCCTTCCAATCTTGTCTCTTATTGTTTTGACCCTTTACAATTTGTAACTAGCCCCAATTTCTGTGCGCAGATTGAGTCTACCCAAGATTGGGTCTCCAAGCTTAATCAGACCACTGCACTTGACTCTGCATGCAAGCCAGACCTCACTAATCTCTCATCCTGTGATGCTTGCGTAGCGGCTGGCTTTAAAATTCATACACAATTAAAAGCCATTGATGGTAACAGTTCTCACTCTAGAGATTGTTGGTACTTGACAATTCTGTACGCAGCAGCTGGTATGATCAACGACTCTGAACCTGAAAGTGAGGGTGCGGTATCTTGTATTTTCGGTTTATCTTTGTTGAATGACACTCTTGTGGGTTTGCGTAAAAAGAGCTATACCGCTCTTGTAACTGCAGTAGTCTCAGCAACAGGAGGGTTGCTTACAATATTATTTTTATACTTCTTATGGAAGAAGTCTTTGGGAAAGAAAAGGGCATATAGTGAGAATATTAGGAATGTTAGTGCTGGAGACGGGAAGAATGATACAGAACTACCGGTCTCAAGTTTAAGGAGTATATTAGCTGCTACAAACAACTTCTCTGAAGCTAATAAACTAGGAGAGGGAGGGTTTGGCCATGTCTATAAGGGCATCTTAAATGAAAATAAAGAGGTAGCCATAAAAAGACTGTCAAAGAAGTCAGGGCAAGGATATCAAGAGTTCATGAATGAGTTAAAACTTATAGCAAAGCTCCAACATAACAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAGAGGAAGAAATGATATTAATCTACGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTATTTGGTATATATATGCTCACACTTCTTCAATGCATTCTTTTATTATGTACAGCTCAAGGAGTACTTTATATTCACAAGCACTCCAGATTGAAAATCATTCACAGGGATCTAAAAGCAAGTAATGTCCTGTTGGATGAAGAAATGAACCCCAAAATTTCAGATTTTGGACTGGCAAAGATTTTCGAGATAAATCAAACTGAAGCAAATACCAACAGGGTTGTCGGGACATATGGTTATATGTCACCTGAGTATGCACGCTATGGCCATTTTTCTGAGAAATTGGATGTATTTAGTTTTGGAGTGTTGTTGCTGGAGATTGTAAGTGGAAGGAAGAATTCCGCTTTCTATCATCTTGAACACCCACTAACTCTTGCTGGATGGGCATGGAAACTATGGAAAGAAGGTAGAGGAATGGAGGTGATTGATAAATCAGTGAGAGAAACGTGTCTGCCTCATGAAGCTTTAAGGTGTATCCATGTAGCATTATTGTGTGTTCAAGAAGATCCAGTTGATCGACCAACCATGTCTTCTGTAATTCACATGTTGGCTAATGAAGCTACATCACTTCCACTATTCAAAGAACCTGCATTTTCAACACATAGTGATTATAAAGCTATTTGCTCTTCTTCTCCACCATCTAGCATTTTTTCGAACAATCTGGTAACCATTAGCATCCCTGAAGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

561

Amino Acids

62.23

Weight (kDa)

6.95

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 4 - 135 2.2e-34 SPARK
Pkinase PF00069 248 - 512 5.3e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 250 - 514 8.4e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1605
Acc16I TGCGCA 1 cut(s) 228
Acc36I ACCTGC 1 cut(s) 1588
AccBSI CCGCTC 1 cut(s) 545
AccI GTMKAC 1 cut(s) 239
AciI CCGC 4 cut(s) 338, 473, 543, 1335
AclWI GGATC 2 cut(s) 1110, 1493
AcoI YGGCCR 2 cut(s) 775, 1258
AcsI RAATTY 5 cut(s) 115, 351, 989, 1149, 1330
AcuI CTGAAG 2 cut(s) 765, 1215
AdeI CACNNNGTG 1 cut(s) 1598
AfaI GTAC 5 cut(s) 410, 425, 965, 1045, 1059
AfiI CCNNNNNNNGG 2 cut(s) 249, 250
AflIII ACRYGT 2 cut(s) 1439, 1536
AgeI ACCGGT 1 cut(s) 697
AgsI TTSAA 8 cut(s) 505, 935, 1025, 1087, 1352, 1493, 1573, 1590
AjuI GAANNNNNNNTTGG 4 cut(s) 605, 637, 1507, 1539
AleI CACNNNNGTG 1 cut(s) 515
Alw26I GTCTC 6 cut(s) 45, 181, 259, 568, 666, 706
AlwI GGATC 2 cut(s) 1110, 1493
AlwNI CAGNNNCTG 1 cut(s) 434
AoxI GGCC 4 cut(s) 55, 75, 775, 1258
ApeKI GCWGC 4 cut(s) 107, 428, 431, 725
ApoI RAATTY 5 cut(s) 115, 351, 989, 1149, 1330
AseI ATTAAT 1 cut(s) 953
AsiGI ACCGGT 1 cut(s) 697
AspLEI GCGC 1 cut(s) 229
AspS9I GGNCC 1 cut(s) 9
AsuHPI GGTGA 2 cut(s) 1230, 1426
AsuII TTCGAA 1 cut(s) 1646
AvaII GGWCC 1 cut(s) 9
BalI TGGCCA 2 cut(s) 777, 1260
BbsI GAAGAC 1 cut(s) 1515
BbvI GCAGC 4 cut(s) 119, 440, 443, 712
BccI CCATC 4 cut(s) 99, 371, 1368, 1639
BciVI GTATCC 1 cut(s) 1478
BclI TGATCA 1 cut(s) 441
BcoDI GTCTC 6 cut(s) 45, 181, 259, 568, 666, 706
BfaI CTAG 5 cut(s) 155, 210, 396, 758, 1635
BfmI CTRYAG 1 cut(s) 555
BfuAI ACCTGC 1 cut(s) 1588
BfuI GTATCC 1 cut(s) 1478
BisI GCNGC 5 cut(s) 108, 339, 429, 432, 726
BlsI GCNGC 5 cut(s) 109, 340, 430, 433, 727
BmcAI AGTACT 1 cut(s) 1059
Bme18I GGWCC 1 cut(s) 9
BmgT120I GGNCC 1 cut(s) 9
BmsI GCATC 3 cut(s) 316, 801, 1677
BpiI GAAGAC 1 cut(s) 1515
BpmI CTGGAG 3 cut(s) 690, 1063, 1328
Bpu14I TTCGAA 1 cut(s) 1646
BpuEI CTTGAG 3 cut(s) 56, 688, 1035
BsaBI GATNNNNATC 1 cut(s) 953
BsaI GGTCTC 2 cut(s) 259, 706
BsaWI WCCGGW 1 cut(s) 697
BsaXI ACNNNNNCTCC 2 cut(s) 1061, 1091
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 250
Bse118I RCCGGY 1 cut(s) 697
Bse1I ACTGG 3 cut(s) 136, 1170, 1502
Bse8I GATNNNNATC 1 cut(s) 953
BseGI GGATG 5 cut(s) 317, 1135, 1285, 1379, 1668
BseJI GATNNNNATC 1 cut(s) 953
BseLI CCNNNNNNNGG 2 cut(s) 249, 250
BseMII CTCAG 3 cut(s) 579, 1233, 1260
BseNI ACTGG 3 cut(s) 136, 1170, 1502
BseXI GCAGC 4 cut(s) 119, 440, 443, 712
BsgI GTGCAG 1 cut(s) 261
BshFI GGCC 4 cut(s) 57, 77, 777, 1260
BshTI ACCGGT 1 cut(s) 697
BsiSI CCGG 1 cut(s) 698
BslFI GGGAC 1 cut(s) 1234
BslI CCNNNNNNNGG 2 cut(s) 249, 250
BsmAI GTCTC 6 cut(s) 45, 181, 259, 568, 666, 706
BsmBI CGTCTC 1 cut(s) 666
BsmFI GGGAC 1 cut(s) 1234
BsmI GAATGC 1 cut(s) 1029
BsnI GGCC 4 cut(s) 57, 77, 777, 1260
Bso31I GGTCTC 2 cut(s) 259, 706
Bsp119I TTCGAA 1 cut(s) 1646
Bsp1407I TGTACA 1 cut(s) 1043
Bsp143I GATC 4 cut(s) 441, 1102, 1498, 1507
BspACI CCGC 4 cut(s) 338, 473, 543, 1335
BspANI GGCC 4 cut(s) 57, 77, 777, 1260
BspCNI CTCAG 3 cut(s) 578, 1234, 1261
BspHI TCATGA 2 cut(s) 864, 1450
BspMAI CTGCAG 1 cut(s) 559
BspMI ACCTGC 1 cut(s) 1588
BspPI GGATC 2 cut(s) 1110, 1493
BspQI GCTCTTC 1 cut(s) 1624
BspT104I TTCGAA 1 cut(s) 1646
BspTNI GGTCTC 2 cut(s) 259, 706
BsrBI CCGCTC 1 cut(s) 545
BsrFI RCCGGY 1 cut(s) 697
BsrGI TGTACA 1 cut(s) 1043
BsrI ACTGG 3 cut(s) 136, 1170, 1502
BssAI RCCGGY 1 cut(s) 697
BssMI GATC 4 cut(s) 441, 1102, 1498, 1507
Bst4CI ACNGT 2 cut(s) 386, 831
Bst6I CTCTTC 2 cut(s) 930, 1624
BstAUI TGTACA 1 cut(s) 1043
BstBI TTCGAA 1 cut(s) 1646
BstC8I GCNNGC 5 cut(s) 292, 296, 331, 343, 1252
BstDEI CTNAG 3 cut(s) 565, 1242, 1269
BstEII GGTNACC 1 cut(s) 1657
BstF5I GGATG 5 cut(s) 317, 1135, 1285, 1379, 1668
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 4 cut(s) 444, 1105, 1501, 1510
BstMAI GTCTC 6 cut(s) 45, 181, 259, 568, 666, 706
BstMBI GATC 4 cut(s) 441, 1102, 1498, 1507
BstMWI GCNNNNNNNGC 3 cut(s) 335, 1376, 1550
BstNSI RCATGY 3 cut(s) 294, 970, 1540
BstPI GGTNACC 1 cut(s) 1657
BstSFI CTRYAG 1 cut(s) 555
BstV1I GCAGC 4 cut(s) 119, 440, 443, 712
BstV2I GAAGAC 1 cut(s) 1515
BstX2I RGATCY 2 cut(s) 1102, 1498
BstYI RGATCY 2 cut(s) 1102, 1498
BsuI GTATCC 1 cut(s) 1478
BsuRI GGCC 4 cut(s) 57, 77, 777, 1260
BtsCI GGATG 5 cut(s) 317, 1135, 1285, 1379, 1668
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 2 cut(s) 273, 1434
BveI ACCTGC 1 cut(s) 1588
Cac8I GCNNGC 5 cut(s) 292, 296, 331, 343, 1252
CaiI CAGNNNCTG 1 cut(s) 434
CciI TCATGA 2 cut(s) 864, 1450
CfoI GCGC 1 cut(s) 229
Cfr10I RCCGGY 1 cut(s) 697
Cfr13I GGNCC 1 cut(s) 9
Csp6I GTAC 5 cut(s) 409, 424, 964, 1044, 1058
CspAI ACCGGT 1 cut(s) 697
CspCI CAANNNNNGTGG 2 cut(s) 262, 297
CviQI GTAC 5 cut(s) 409, 424, 964, 1044, 1058
DdeI CTNAG 3 cut(s) 565, 1242, 1269
DpnI GATC 4 cut(s) 443, 1104, 1500, 1509
DpnII GATC 4 cut(s) 441, 1102, 1498, 1507
DraI TTTAAA 1 cut(s) 349
DraIII CACNNNGTG 1 cut(s) 1598
EaeI YGGCCR 2 cut(s) 775, 1258
Eam1104I CTCTTC 2 cut(s) 930, 1624
EarI CTCTTC 2 cut(s) 930, 1624
Eco147I AGGCCT 1 cut(s) 57
Eco31I GGTCTC 2 cut(s) 259, 706
Eco32I GATATC 1 cut(s) 854
Eco47I GGWCC 1 cut(s) 9
Eco57I CTGAAG 2 cut(s) 765, 1215
Eco91I GGTNACC 1 cut(s) 1657
EcoO65I GGTNACC 1 cut(s) 1657
EcoRI GAATTC 1 cut(s) 1330
EcoRV GATATC 1 cut(s) 854
EcoT22I ATGCAT 1 cut(s) 1031
Esp3I CGTCTC 1 cut(s) 666
FalI AAGNNNNNCTT 4 cut(s) 779, 811, 1044, 1076
FaqI GGGAC 1 cut(s) 1234
FauNDI CATATG 1 cut(s) 1225
FbaI TGATCA 1 cut(s) 441
FblI GTMKAC 1 cut(s) 239
Fnu4HI GCNGC 5 cut(s) 108, 339, 429, 432, 726
FokI GGATG 5 cut(s) 304, 1142, 1292, 1386, 1655
Fsp4HI GCNGC 5 cut(s) 108, 339, 429, 432, 726
FspBI CTAG 5 cut(s) 155, 210, 396, 758, 1635
FspI TGCGCA 1 cut(s) 228
GlaI GCGC 1 cut(s) 228
GluI GCNGC 5 cut(s) 108, 339, 429, 432, 726
GsuI CTGGAG 3 cut(s) 690, 1063, 1328
HaeIII GGCC 4 cut(s) 57, 77, 777, 1260
HapII CCGG 1 cut(s) 698
HhaI GCGC 1 cut(s) 229
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
HindIII AAGCTT 3 cut(s) 143, 260, 1455
HinfI GANTC 3 cut(s) 236, 284, 449
HpaII CCGG 1 cut(s) 698
HphI GGTGA 2 cut(s) 1230, 1426
Hpy166II GTNNAC 1 cut(s) 240
Hpy188I TCNGA 5 cut(s) 270, 454, 745, 1156, 1270
Hpy188III TCNNGA 9 cut(s) 396, 857, 865, 1080, 1180, 1219, 1349, 1451, 1493
Hpy8I GTNNAC 1 cut(s) 240
HpyAV CCTTC 4 cut(s) 174, 1317, 1391, 1670
HpyCH4III ACNGT 2 cut(s) 386, 831
HpyCH4IV ACGT 1 cut(s) 1439
HpyCH4V TGCA 7 cut(s) 278, 290, 294, 557, 1029, 1250, 1583
HpyF10VI GCNNNNNNNGC 3 cut(s) 335, 1376, 1550
HpyF3I CTNAG 3 cut(s) 565, 1242, 1269
HpySE526I ACGT 1 cut(s) 1439
HspAI GCGC 1 cut(s) 227
Ksp22I TGATCA 1 cut(s) 441
Kzo9I GATC 4 cut(s) 441, 1102, 1498, 1507
LguI GCTCTTC 1 cut(s) 1624
LmnI GCTCC 1 cut(s) 897
Lsp1109I GCAGC 4 cut(s) 119, 440, 443, 712
LweI GCATC 3 cut(s) 316, 801, 1677
MaeI CTAG 5 cut(s) 155, 210, 396, 758, 1635
MaeII ACGT 1 cut(s) 1439
MaeIII GTNAC 5 cut(s) 205, 380, 550, 1236, 1657
MalI GATC 4 cut(s) 443, 1104, 1500, 1509
MbiI CCGCTC 1 cut(s) 545
MboI GATC 4 cut(s) 441, 1102, 1498, 1507
MflI RGATCY 2 cut(s) 1102, 1498
MlsI TGGCCA 2 cut(s) 777, 1260
MluNI TGGCCA 2 cut(s) 777, 1260
MlyI GAGTC 3 cut(s) 245, 278, 443
MmeI TCCRAC 2 cut(s) 919, 1107
Mox20I TGGCCA 2 cut(s) 777, 1260
Mph1103I ATGCAT 1 cut(s) 1031
MscI TGGCCA 2 cut(s) 777, 1260
MseI TTAA 8 cut(s) 264, 348, 365, 710, 797, 875, 953, 1460
MslI CAYNNNNRTG 2 cut(s) 515, 1483
Msp20I TGGCCA 2 cut(s) 777, 1260
MspA1I CMGCKG 1 cut(s) 434
MspI CCGG 1 cut(s) 698
Mva1269I GAATGC 1 cut(s) 1029
MwoI GCNNNNNNNGC 3 cut(s) 335, 1376, 1550
NdeI CATATG 1 cut(s) 1225
NdeII GATC 4 cut(s) 441, 1102, 1498, 1507
NmuCI GTSAC 1 cut(s) 1236
NsbI TGCGCA 1 cut(s) 228
NsiI ATGCAT 1 cut(s) 1031
NspI RCATGY 3 cut(s) 294, 970, 1540
NspV TTCGAA 1 cut(s) 1646
OliI CACNNNNGTG 1 cut(s) 515
PaeI GCATGC 1 cut(s) 294
PagI TCATGA 2 cut(s) 864, 1450
PceI AGGCCT 1 cut(s) 57
PciI ACATGT 1 cut(s) 1536
PciSI GCTCTTC 1 cut(s) 1624
PctI GAATGC 1 cut(s) 1029
PinAI ACCGGT 1 cut(s) 697
PkrI GCNGC 5 cut(s) 109, 340, 430, 433, 727
PleI GAGTC 3 cut(s) 244, 278, 443
PpsI GAGTC 3 cut(s) 244, 278, 443
PscI ACATGT 1 cut(s) 1536
PshBI ATTAAT 1 cut(s) 953
PsiI TTATAA 1 cut(s) 1605
PspEI GGTNACC 1 cut(s) 1657
PspPI GGNCC 1 cut(s) 9
PstI CTGCAG 1 cut(s) 559
PstNI CAGNNNCTG 1 cut(s) 434
PsuI RGATCY 2 cut(s) 1102, 1498
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 5 cut(s) 410, 425, 965, 1045, 1059
RsaNI GTAC 5 cut(s) 409, 424, 964, 1044, 1058
RseI CAYNNNNRTG 2 cut(s) 515, 1483
SapI GCTCTTC 1 cut(s) 1624
SaqAI TTAA 8 cut(s) 264, 348, 365, 710, 797, 875, 953, 1460
SatI GCNGC 5 cut(s) 108, 339, 429, 432, 726
Sau3AI GATC 4 cut(s) 441, 1102, 1498, 1507
Sau96I GGNCC 1 cut(s) 9
ScaI AGTACT 1 cut(s) 1059
SchI GAGTC 3 cut(s) 245, 278, 443
SfaNI GCATC 3 cut(s) 316, 801, 1677
SfcI CTRYAG 1 cut(s) 555
SfuI TTCGAA 1 cut(s) 1646
SinI GGWCC 1 cut(s) 9
SmiMI CAYNNNNRTG 2 cut(s) 515, 1483
SmlI CTYRAG 3 cut(s) 71, 703, 1050
SmoI CTYRAG 3 cut(s) 71, 703, 1050
SphI GCATGC 1 cut(s) 294
SseBI AGGCCT 1 cut(s) 57
SsiI CCGC 4 cut(s) 338, 473, 543, 1335
SspI AATATT 2 cut(s) 591, 652
SspMI CTAG 5 cut(s) 155, 210, 396, 758, 1635
StuI AGGCCT 1 cut(s) 57
TaaI ACNGT 2 cut(s) 386, 831
TaiI ACGT 1 cut(s) 1442
TaqI TCGA 5 cut(s) 976, 1179, 1510, 1646, 1681
TatI WGTACW 3 cut(s) 963, 1043, 1057
TauI GCSGC 1 cut(s) 341
Tru1I TTAA 8 cut(s) 264, 348, 365, 710, 797, 875, 953, 1460
Tru9I TTAA 8 cut(s) 264, 348, 365, 710, 797, 875, 953, 1460
TscAI CASTG 2 cut(s) 280, 1434
TseFI GTSAC 1 cut(s) 1236
TseI GCWGC 4 cut(s) 107, 428, 431, 725
Tsp45I GTSAC 1 cut(s) 1236
TspDTI ATGAA 8 cut(s) 344, 816, 853, 881, 1146, 1154, 1467, 1563
TspRI CASTG 2 cut(s) 280, 1434
VpaK11BI GGWCC 1 cut(s) 9
VspI ATTAAT 1 cut(s) 953
XapI RAATTY 5 cut(s) 115, 351, 989, 1149, 1330
XbaI TCTAGA 1 cut(s) 395
XceI RCATGY 3 cut(s) 294, 970, 1540
XmiI GTMKAC 1 cut(s) 239
XspI CTAG 5 cut(s) 155, 210, 396, 758, 1635
ZrmI AGTACT 1 cut(s) 1059
Zsp2I ATGCAT 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.