RchiOBHm_Chr5g0066841

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
72916068 .. 72917818
1751 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34259

Sequence Viewer

Length: 1179 bp
ATGGCCCTTGATGGCAACACTTCTCGCTCTGGAAATTGTTTTTTCTATACGGCGCTTTATGCAGCAGCTTCATTTGACCCTGAACCCGGAAGTGATGGTGCCATGACCTGCATTTTGGGGTTGTCAATAATTGCGGATTCTCCTGTGGCTTCACCAAAGAAGAGAAAGAAGAGAAATACCACTCTTGTAATTGCAATAGTTTCTGCATTAACAGGATTGCTTACAATAGTTTTTCTTTACTTTTTATGGAAGAAAACTTTCGGAAAGCCAAGGGAGTATAGTGAGATTATAAGGAATGTTAGTGCTGGAGGTGCACAAAATGAAACAGAACTACCAATCTTTAGGTTAAGGAGTATATTAGCTGCTATAAACAATTTCTATGAAGCTAATAAACTTGGAGAAGGAGGATTTGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAGAGACTGTCAAAGAAATCCGGGCAAGGATATAAGGAGTTCATGAATGAGTTAAAACTTATAGCCAAGCTTCAACATACAAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAGAGGAGGAATTGATATTGATCTATGAGTACATGCCCAATCGAAGTTTAGACAAATTTTTGTTTGATCCATCTGAAAACACAAGATTGGATTGGAGTAAACGTTTTCAAATCATAGAAGGTATTGCTCAAGGGGTACTTTATATCCACAAGCACTCCATATTGAAGATCATTCACAGGGATCTAAAAGCTAGTAATGTTCTGTTGGATGGAGAAATGAATCCCAAAATTTCTGACTTTGGAATGGCAAAGATTTTCGACATGAATCAAACAGAAGCAAATACTAACAGGGTTGTTGGAACATACGGTTACATATCTCCCGAGTATGCACGTTACGGCCATTTCTCTGAGAAATTGGATGTGTTCAGCTTTGGAGTGTTGGATGTGTTCAGCTTTGGAGTATTGCTGTTAGAGATTGTAAGTGGAAAAAAGAATGGTGCTTTCCATCATGTTGAACATTCACCAACTCTTGCTGGATGGGCTTGGAAATTATGGAAAGAAGGTAAAGGAGTGGAGGTAATTGATGCATCAATGAGAGAAACATGTCTGCCTCATGAAGCTTTAAGATGTATCCATGTTGCATTTTTGTGTTCAAGAAGCTCCAGCTGA

Protein Analysis

392

Amino Acids

43.88

Weight (kDa)

8.51

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 129 - 317 2.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 130 - 317 7.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 290, 423
Acc36I ACCTGC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 98
AciI CCGC 1 cut(s) 134
AclI AACGTT 1 cut(s) 673
AclWI GGATC 2 cut(s) 632, 759
AcoI YGGCCR 1 cut(s) 907
AcsI RAATTY 2 cut(s) 626, 798
AfaI GTAC 2 cut(s) 602, 708
AfiI CCNNNNNNNGG 1 cut(s) 86
AflIII ACRYGT 1 cut(s) 1112
AgsI TTSAA 6 cut(s) 533, 572, 680, 736, 1025, 1164
AjuI GAANNNNNNNTTGG 2 cut(s) 393, 425
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 1 cut(s) 457
Alw44I GTGCAC 1 cut(s) 312
AlwI GGATC 2 cut(s) 632, 759
Ama87I CYCGRG 1 cut(s) 890
AoxI GGCC 3 cut(s) 3, 412, 907
ApaLI GTGCAC 1 cut(s) 312
ApeKI GCWGC 3 cut(s) 62, 65, 362
ApoI RAATTY 2 cut(s) 626, 798
ArsI GACNNNNNNTTYG 2 cut(s) 97, 129
Asp700I GAANNNNTTC 1 cut(s) 257
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 2 cut(s) 4, 413
AsuC2I CCSGG 2 cut(s) 87, 481
AsuHPI GGTGA 2 cut(s) 144, 1023
AvaI CYCGRG 1 cut(s) 890
BaeGI GKGCMC 1 cut(s) 316
BanI GGYRCC 1 cut(s) 98
Bbv12I GWGCWC 1 cut(s) 316
BbvI GCAGC 3 cut(s) 74, 77, 349
BccI CCATC 6 cut(s) 5, 89, 649, 773, 1023, 1041
BceAI ACGGC 2 cut(s) 66, 922
BciVI GTATCC 1 cut(s) 1151
BcnI CCSGG 2 cut(s) 87, 481
BcoDI GTCTC 1 cut(s) 457
BfaI CTAG 1 cut(s) 762
BfoI RGCGCY 1 cut(s) 56
BfuAI ACCTGC 1 cut(s) 116
BfuI GTATCC 1 cut(s) 1151
BisI GCNGC 3 cut(s) 63, 66, 363
BlsI GCNGC 3 cut(s) 64, 67, 364
Bme1390I CCNGG 2 cut(s) 87, 481
BmeT110I CYCGRG 1 cut(s) 890
BmgT120I GGNCC 2 cut(s) 4, 413
BmiI GGNNCC 1 cut(s) 100
BmrFI CCNGG 2 cut(s) 87, 481
BmsI GCATC 2 cut(s) 1084, 1106
BpmI CTGGAG 2 cut(s) 327, 1156
BpuEI CTTGAG 1 cut(s) 684
BpuMI CCSGG 2 cut(s) 87, 481
BsaBI GATNNNNATC 1 cut(s) 590
BsaJI CCNNGG 1 cut(s) 269
BsaXI ACNNNNNCTCC 6 cut(s) 658, 688, 710, 740, 1071, 1101
Bsc4I CCNNNNNNNGG 1 cut(s) 86
Bse8I GATNNNNATC 1 cut(s) 590
BseDI CCNNGG 1 cut(s) 269
BseGI GGATG 4 cut(s) 784, 934, 958, 1052
BseJI GATNNNNATC 1 cut(s) 590
BseLI CCNNNNNNNGG 1 cut(s) 86
BseMII CTCAG 1 cut(s) 909
BseRI GAGGAG 1 cut(s) 590
BseSI GKGCMC 1 cut(s) 316
BseXI GCAGC 3 cut(s) 74, 77, 349
BshFI GGCC 3 cut(s) 5, 414, 909
BshNI GGYRCC 1 cut(s) 98
BsiHKAI GWGCWC 1 cut(s) 316
BsiHKCI CYCGRG 1 cut(s) 890
BsiSI CCGG 2 cut(s) 87, 480
BslI CCNNNNNNNGG 1 cut(s) 86
BsmAI GTCTC 1 cut(s) 457
BsnI GGCC 3 cut(s) 5, 414, 909
BsoBI CYCGRG 1 cut(s) 890
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 4 cut(s) 591, 637, 738, 751
BspACI CCGC 1 cut(s) 134
BspANI GGCC 3 cut(s) 5, 414, 909
BspCNI CTCAG 1 cut(s) 910
BspHI TCATGA 2 cut(s) 501, 1123
BspLI GGNNCC 1 cut(s) 100
BspMI ACCTGC 1 cut(s) 116
BspPI GGATC 2 cut(s) 632, 759
BspT107I GGYRCC 1 cut(s) 98
BssECI CCNNGG 1 cut(s) 269
BssMI GATC 4 cut(s) 591, 637, 738, 751
BssT1I CCWWGG 1 cut(s) 269
Bst4CI ACNGT 2 cut(s) 468, 878
Bst6I CTCTTC 3 cut(s) 155, 164, 567
BstDEI CTNAG 1 cut(s) 918
BstF5I GGATG 4 cut(s) 784, 934, 958, 1052
BstH2I RGCGCY 1 cut(s) 56
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 4 cut(s) 594, 640, 741, 754
BstMAI GTCTC 1 cut(s) 457
BstMBI GATC 4 cut(s) 591, 637, 738, 751
BstMWI GCNNNNNNNGC 3 cut(s) 59, 311, 1049
BstNSI RCATGY 2 cut(s) 607, 1116
BstSCI CCNGG 2 cut(s) 85, 479
BstSLI GKGCMC 1 cut(s) 316
BstV1I GCAGC 3 cut(s) 74, 77, 349
BstX2I RGATCY 1 cut(s) 751
BstYI RGATCY 1 cut(s) 751
BsuI GTATCC 1 cut(s) 1151
BsuRI GGCC 3 cut(s) 5, 414, 909
BtsCI GGATG 4 cut(s) 784, 934, 958, 1052
BveI ACCTGC 1 cut(s) 116
CciI TCATGA 2 cut(s) 501, 1123
CfoI GCGC 1 cut(s) 55
Cfr13I GGNCC 2 cut(s) 4, 413
Csp6I GTAC 2 cut(s) 601, 707
CviAII CATG 8 cut(s) 103, 502, 604, 832, 1019, 1113, 1124, 1145
CviQI GTAC 2 cut(s) 601, 707
DdeI CTNAG 1 cut(s) 918
DpnI GATC 4 cut(s) 593, 639, 740, 753
DpnII GATC 4 cut(s) 591, 637, 738, 751
EaeI YGGCCR 1 cut(s) 907
Eam1104I CTCTTC 3 cut(s) 155, 164, 567
EarI CTCTTC 3 cut(s) 155, 164, 567
Eco130I CCWWGG 1 cut(s) 269
Eco88I CYCGRG 1 cut(s) 890
EcoT14I CCWWGG 1 cut(s) 269
EcoT22I ATGCAT 1 cut(s) 1099
ErhI CCWWGG 1 cut(s) 269
FaeI CATG 8 cut(s) 106, 505, 607, 835, 1022, 1116, 1127, 1148
FalI AAGNNNNNCTT 2 cut(s) 693, 725
FatI CATG 8 cut(s) 102, 501, 603, 831, 1018, 1112, 1123, 1144
Fnu4HI GCNGC 3 cut(s) 63, 66, 363
FokI GGATG 4 cut(s) 791, 941, 965, 1059
Fsp4HI GCNGC 3 cut(s) 63, 66, 363
FspBI CTAG 1 cut(s) 762
GlaI GCGC 1 cut(s) 54
GluI GCNGC 3 cut(s) 63, 66, 363
GsuI CTGGAG 2 cut(s) 327, 1156
HaeII RGCGCY 1 cut(s) 56
HaeIII GGCC 3 cut(s) 5, 414, 909
HapII CCGG 2 cut(s) 87, 480
HhaI GCGC 1 cut(s) 55
Hin1II CATG 8 cut(s) 106, 505, 607, 835, 1022, 1116, 1127, 1148
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HindIII AAGCTT 2 cut(s) 527, 1128
HinfI GANTC 3 cut(s) 137, 790, 835
HpaII CCGG 2 cut(s) 87, 480
HphI GGTGA 2 cut(s) 144, 1023
Hpy166II GTNNAC 2 cut(s) 314, 671
Hpy188I TCNGA 4 cut(s) 263, 646, 805, 919
Hpy188III TCNNGA 6 cut(s) 30, 446, 502, 890, 1124, 1164
Hpy8I GTNNAC 2 cut(s) 314, 671
HpyAV CCTTC 3 cut(s) 395, 683, 1064
HpyCH4III ACNGT 2 cut(s) 468, 878
HpyCH4IV ACGT 2 cut(s) 673, 901
HpyCH4V TGCA 8 cut(s) 62, 111, 194, 206, 314, 899, 1097, 1151
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 311, 1049
HpyF3I CTNAG 1 cut(s) 918
HpySE526I ACGT 2 cut(s) 673, 901
Hsp92II CATG 8 cut(s) 106, 505, 607, 835, 1022, 1116, 1127, 1148
HspAI GCGC 1 cut(s) 53
Kzo9I GATC 4 cut(s) 591, 637, 738, 751
LmnI GCTCC 1 cut(s) 1175
Lsp1109I GCAGC 3 cut(s) 74, 77, 349
LweI GCATC 2 cut(s) 1084, 1106
MaeI CTAG 1 cut(s) 762
MaeII ACGT 2 cut(s) 673, 901
MaeIII GTNAC 2 cut(s) 878, 902
MalI GATC 4 cut(s) 593, 639, 740, 753
MboI GATC 4 cut(s) 591, 637, 738, 751
MboII GAAGA 5 cut(s) 172, 181, 262, 584, 748
MflI RGATCY 1 cut(s) 751
MhlI GDGCHC 1 cut(s) 316
MmeI TCCRAC 3 cut(s) 756, 847, 930
MnlI CCTC 6 cut(s) 302, 398, 568, 571, 1078, 1131
Mph1103I ATGCAT 1 cut(s) 1099
MroXI GAANNNNTTC 1 cut(s) 257
MseI TTAA 4 cut(s) 209, 347, 512, 1133
MslI CAYNNNNRTG 1 cut(s) 1156
MspA1I CMGCKG 1 cut(s) 1176
MspI CCGG 2 cut(s) 87, 480
MspR9I CCNGG 2 cut(s) 87, 481
MwoI GCNNNNNNNGC 3 cut(s) 59, 311, 1049
NciI CCSGG 2 cut(s) 87, 481
NdeII GATC 4 cut(s) 591, 637, 738, 751
NlaIII CATG 8 cut(s) 106, 505, 607, 835, 1022, 1116, 1127, 1148
NlaIV GGNNCC 1 cut(s) 100
NsiI ATGCAT 1 cut(s) 1099
NspI RCATGY 2 cut(s) 607, 1116
PagI TCATGA 2 cut(s) 501, 1123
PciI ACATGT 1 cut(s) 1112
PdmI GAANNNNTTC 1 cut(s) 257
PfeI GAWTC 3 cut(s) 137, 790, 835
PkrI GCNGC 3 cut(s) 64, 67, 364
PscI ACATGT 1 cut(s) 1112
PsiI TTATAA 2 cut(s) 290, 423
Psp1406I AACGTT 1 cut(s) 673
PspN4I GGNNCC 1 cut(s) 100
PspPI GGNCC 2 cut(s) 4, 413
PsuI RGATCY 1 cut(s) 751
PvuII CAGCTG 1 cut(s) 1176
RsaI GTAC 2 cut(s) 602, 708
RsaNI GTAC 2 cut(s) 601, 707
RseI CAYNNNNRTG 1 cut(s) 1156
SaqAI TTAA 4 cut(s) 209, 347, 512, 1133
SatI GCNGC 3 cut(s) 63, 66, 363
Sau3AI GATC 4 cut(s) 591, 637, 738, 751
Sau96I GGNCC 2 cut(s) 4, 413
ScrFI CCNGG 2 cut(s) 87, 481
SduI GDGCHC 1 cut(s) 316
SfaNI GCATC 2 cut(s) 1084, 1106
SmiMI CAYNNNNRTG 1 cut(s) 1156
SmlI CTYRAG 1 cut(s) 699
SmoI CTYRAG 1 cut(s) 699
SsiI CCGC 1 cut(s) 134
SspMI CTAG 1 cut(s) 762
StyD4I CCNGG 2 cut(s) 85, 479
StyI CCWWGG 1 cut(s) 269
TaaI ACNGT 2 cut(s) 468, 878
TaiI ACGT 2 cut(s) 676, 904
TaqI TCGA 2 cut(s) 613, 828
TatI WGTACW 1 cut(s) 600
TfiI GAWTC 3 cut(s) 137, 790, 835
Tru1I TTAA 4 cut(s) 209, 347, 512, 1133
Tru9I TTAA 4 cut(s) 209, 347, 512, 1133
TseI GCWGC 3 cut(s) 62, 65, 362
TspDTI ATGAA 8 cut(s) 60, 336, 396, 490, 518, 803, 848, 1140
VneI GTGCAC 1 cut(s) 312
XapI RAATTY 2 cut(s) 626, 798
XceI RCATGY 2 cut(s) 607, 1116
XmnI GAANNNNTTC 1 cut(s) 257
XspI CTAG 1 cut(s) 762
Zsp2I ATGCAT 1 cut(s) 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.