RLG00000008827

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000114
Physical Location & Seq
Reverse (-)
40330525 .. 40332921
2397 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008827

Sequence Viewer

Length: 1797 bp
ATGGCTGAAGTGATGAAATTGATTGGGCTTTTGTTGGTGTTTCTCTCACTACTTTCTCTCTCTGCTGCCCAATCTCCAAATACAATTACCAACAGAACAACATGCCCCATTGATCTCAGCTATGTCCTTAGACTGCCCTTCAACTCTTCATCATGCAAAAATTTCCAAGCCCCTCCCAGAACCCCTCAAATGGACAGGACCAATATATCATGTTGTCAAACCCTATTGTCTCTTTTTGGCATAGGCCTTGCCCAACACCTCAAGGCCACCACTCTTTTCCTACTCCCCAACATAGCAGCCTCAAATTCTTGCCTCCAAAACTACCAGTCCAAGCTTACCTCTCTAGCACTCCCTTCCAATCTTGTCTCTTATTGTTTTGACCCTTTACAATTTGTAACTGGCCCCAATTTCTGTGCGCAGATTGAGTCTACCCAAGATTGGGTCTCCAAGCTTAATCAGACCACTGCACTTGACTCTGCATGCAAGCCAGACCTCACTAATCTCTCATCCTGTGATGCTTGCGTAGCGGCTGGCTTAAAAATTCATACACAATTAATCGCCATTGATGGTAACAGTTCTCACTCTAGAGATTGTTGGTACTTTACAATTCTGTATGCAGCAGCTGGTATGATCAACGACTCTGAACCTGAAAGTGAGGGTGCCGTATCTTGTATTTTCGGTTTATCTTTATTGAATGTCACTCTTGTGGGTTTGCGTAAAAAGAGCTATACCGCTCTTGTAACTGCAGTAGTCTCAGCAACAGGAGGGTTGCTTACAATATTATTTTTATACTTCTTATGGAAGAAGTCTTTGGGAAAGAAAAGGGCATATAGTGAGAATATTAGGAATGTTAGTGCTGGAGATGGGAAGAATGATACAGAACTACCGGGCATCTTAAATGAAAATCAAGAGGTAGCCATAAAAAGACTGTCAAAGAAGTCAGGGCAAGGATATCAAGAGTTCATGAATGAGTTAAAACTTATAGCAAAGCTCCAACATAACAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAGAGGAAGAAATGATATTAATCTACGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCAAGGGAAAACATAAAATTGGATTGGGGTAAACGCTTTCGAATTATAGAAGGTACAGCTCAAGGAGTACTTTATATTCACAAACACTCCAGATTGAAAATCATTCACAGGGATCTAAAAGCAAGTAATGTCCTGTTGGATGAAGAAATGAACCCCAAAATTTCAGATTTTGGAATGGCAAAGATTTTCGAGATAAATCAAACTGACGCAAATACCAACAGGGTTGTTGGGACATACGGTTATATGTCACCTGAGTATGCACGCTATGGCCATTTTTCTGAAAAATTGGATGTATTTAGTTTTGGAGTGTTGTTGCTGGAGATTGTAAGTGGAAGGAGGAATTCCGCTTTCTATCATCTTGAACACCCGGTAACTCTTGCTGGATGGGCATGGAAACTATGGAAAGAAGGTAGAGGAATGGAGGTGATTGATGAATCAGTGAGAGAAACGTGTCTGCCTCATGAAGCTTTAAGGTGTATCCATGTAGCATTATTGTGTGTTCAAGAAGATCCAGTTGATCGACCAACCATGTCTTCTGTAATTCACATGTTGGCTAATGAAGCTACATCACTTCCACTATTCAAAGAACCTGCATTTTCAACACATGGTGATTATAAAGCTATTTGCTCTTCTTCTCCATCATCTAGCATTTTTTCGAACAATCTGGTAACCATTAGCATCCCTGAAGGTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

599

Amino Acids

66.5

Weight (kDa)

6.91

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 31 - 198 9.4e-41 SPARK
PK_Tyr_Ser-Thr PF07714 300 - 551 3.1e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 300 - 549 1.7e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1716
Acc16I TGCGCA 1 cut(s) 417
Acc36I ACCTGC 1 cut(s) 1699
AccB1I GGYRCC 1 cut(s) 659
AccBSI CCGCTC 1 cut(s) 734
AccI GTMKAC 1 cut(s) 428
AciI CCGC 3 cut(s) 527, 732, 1446
AclWI GGATC 3 cut(s) 1094, 1221, 1604
AcoI YGGCCR 1 cut(s) 1369
AcsI RAATTY 6 cut(s) 160, 304, 540, 1088, 1260, 1441
AcuI CTGAAG 1 cut(s) 27
AdeI CACNNNGTG 1 cut(s) 1709
AfaI GTAC 4 cut(s) 599, 1064, 1156, 1170
AfiI CCNNNNNNNGG 3 cut(s) 190, 438, 439
AflIII ACRYGT 2 cut(s) 1550, 1647
AgsI TTSAA 8 cut(s) 142, 694, 1034, 1198, 1463, 1604, 1684, 1701
AjuI GAANNNNNNNTTGG 4 cut(s) 794, 826, 1618, 1650
AleI CACNNNNGTG 1 cut(s) 704
Alw26I GTCTC 4 cut(s) 234, 370, 448, 757
AlwI GGATC 3 cut(s) 1094, 1221, 1604
AlwNI CAGNNNCTG 1 cut(s) 623
AoxI GGCC 4 cut(s) 244, 264, 400, 1369
ApeKI GCWGC 4 cut(s) 65, 296, 617, 620
ApoI RAATTY 6 cut(s) 160, 304, 540, 1088, 1260, 1441
AseI ATTAAT 2 cut(s) 554, 1052
AspLEI GCGC 1 cut(s) 418
AspS9I GGNCC 2 cut(s) 198, 401
AsuC2I CCSGG 2 cut(s) 888, 1469
AsuHPI GGTGA 3 cut(s) 1341, 1537, 1721
AsuII TTCGAA 2 cut(s) 1141, 1757
AvaII GGWCC 1 cut(s) 198
BalI TGGCCA 1 cut(s) 1371
BanI GGYRCC 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 1626
BbvI GCAGC 4 cut(s) 52, 308, 629, 632
BccI CCATC 4 cut(s) 560, 857, 1479, 1747
BceAI ACGGC 1 cut(s) 647
BciVI GTATCC 1 cut(s) 1589
BclI TGATCA 1 cut(s) 630
BcnI CCSGG 2 cut(s) 888, 1469
BcoDI GTCTC 4 cut(s) 234, 370, 448, 757
BfaI CTAG 3 cut(s) 344, 585, 1746
BfmI CTRYAG 1 cut(s) 744
BfuAI ACCTGC 1 cut(s) 1699
BfuI GTATCC 1 cut(s) 1589
BisI GCNGC 5 cut(s) 66, 297, 528, 618, 621
BlsI GCNGC 5 cut(s) 67, 298, 529, 619, 622
BmcAI AGTACT 1 cut(s) 1170
Bme1390I CCNGG 2 cut(s) 888, 1469
Bme18I GGWCC 1 cut(s) 198
BmgT120I GGNCC 2 cut(s) 198, 401
BmiI GGNNCC 2 cut(s) 403, 661
BmrFI CCNGG 2 cut(s) 888, 1469
BmsI GCATC 3 cut(s) 505, 900, 1788
BpiI GAAGAC 1 cut(s) 1626
BpmI CTGGAG 3 cut(s) 879, 1174, 1439
Bpu14I TTCGAA 2 cut(s) 1141, 1757
BpuEI CTTGAG 2 cut(s) 245, 1146
BpuMI CCSGG 2 cut(s) 888, 1469
BsaBI GATNNNNATC 1 cut(s) 1052
BsaI GGTCTC 1 cut(s) 448
BsaJI CCNNGG 1 cut(s) 1103
BsaXI ACNNNNNCTCC 2 cut(s) 1172, 1202
Bsc4I CCNNNNNNNGG 3 cut(s) 190, 438, 439
Bse1I ACTGG 3 cut(s) 325, 403, 1613
Bse8I GATNNNNATC 1 cut(s) 1052
BseDI CCNNGG 1 cut(s) 1103
BseGI GGATG 5 cut(s) 506, 1246, 1396, 1490, 1779
BseJI GATNNNNATC 1 cut(s) 1052
BseLI CCNNNNNNNGG 3 cut(s) 190, 438, 439
BseMII CTCAG 3 cut(s) 130, 768, 1344
BseNI ACTGG 3 cut(s) 325, 403, 1613
BseXI GCAGC 4 cut(s) 52, 308, 629, 632
BsgI GTGCAG 1 cut(s) 450
BshFI GGCC 4 cut(s) 246, 266, 402, 1371
BshNI GGYRCC 1 cut(s) 659
BsiSI CCGG 2 cut(s) 887, 1469
BslFI GGGAC 1 cut(s) 1345
BslI CCNNNNNNNGG 3 cut(s) 190, 438, 439
BsmAI GTCTC 4 cut(s) 234, 370, 448, 757
BsmFI GGGAC 1 cut(s) 1345
BsnI GGCC 4 cut(s) 246, 266, 402, 1371
Bso31I GGTCTC 1 cut(s) 448
Bsp119I TTCGAA 2 cut(s) 1141, 1757
Bsp143I GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
BspACI CCGC 3 cut(s) 527, 732, 1446
BspANI GGCC 4 cut(s) 246, 266, 402, 1371
BspCNI CTCAG 3 cut(s) 129, 767, 1345
BspHI TCATGA 2 cut(s) 963, 1561
BspLI GGNNCC 2 cut(s) 403, 661
BspMAI CTGCAG 1 cut(s) 748
BspMI ACCTGC 1 cut(s) 1699
BspPI GGATC 3 cut(s) 1094, 1221, 1604
BspQI GCTCTTC 1 cut(s) 1735
BspT104I TTCGAA 2 cut(s) 1141, 1757
BspT107I GGYRCC 1 cut(s) 659
BspTNI GGTCTC 1 cut(s) 448
BsrBI CCGCTC 1 cut(s) 734
BsrI ACTGG 3 cut(s) 325, 403, 1613
BssECI CCNNGG 1 cut(s) 1103
BssMI GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
BssT1I CCWWGG 1 cut(s) 1103
Bst4CI ACNGT 3 cut(s) 575, 930, 1340
Bst6I CTCTTC 3 cut(s) 151, 1029, 1735
BstBI TTCGAA 2 cut(s) 1141, 1757
BstC8I GCNNGC 5 cut(s) 481, 485, 520, 532, 1363
BstDEI CTNAG 4 cut(s) 116, 128, 754, 1353
BstEII GGTNACC 1 cut(s) 1768
BstF5I GGATG 5 cut(s) 506, 1246, 1396, 1490, 1779
BstHHI GCGC 1 cut(s) 418
BstKTI GATC 6 cut(s) 115, 633, 1102, 1216, 1612, 1621
BstMAI GTCTC 4 cut(s) 234, 370, 448, 757
BstMBI GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
BstMWI GCNNNNNNNGC 3 cut(s) 524, 1487, 1661
BstNSI RCATGY 4 cut(s) 105, 483, 1069, 1651
BstPI GGTNACC 1 cut(s) 1768
BstSCI CCNGG 2 cut(s) 886, 1467
BstSFI CTRYAG 1 cut(s) 744
BstV1I GCAGC 4 cut(s) 52, 308, 629, 632
BstV2I GAAGAC 1 cut(s) 1626
BstX2I RGATCY 2 cut(s) 1213, 1609
BstYI RGATCY 2 cut(s) 1213, 1609
BsuI GTATCC 1 cut(s) 1589
BsuRI GGCC 4 cut(s) 246, 266, 402, 1371
BtsCI GGATG 5 cut(s) 506, 1246, 1396, 1490, 1779
BtsI GCAGTG 1 cut(s) 462
BtsIMutI CAGTG 2 cut(s) 462, 1545
BveI ACCTGC 1 cut(s) 1699
Cac8I GCNNGC 5 cut(s) 481, 485, 520, 532, 1363
CaiI CAGNNNCTG 1 cut(s) 623
CciI TCATGA 2 cut(s) 963, 1561
CfoI GCGC 1 cut(s) 418
Cfr13I GGNCC 2 cut(s) 198, 401
CseI GACGC 1 cut(s) 1316
Csp6I GTAC 4 cut(s) 598, 1063, 1155, 1169
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviQI GTAC 4 cut(s) 598, 1063, 1155, 1169
DdeI CTNAG 4 cut(s) 116, 128, 754, 1353
DpnI GATC 6 cut(s) 114, 632, 1101, 1215, 1611, 1620
DpnII GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
DraIII CACNNNGTG 1 cut(s) 1709
EaeI YGGCCR 1 cut(s) 1369
Eam1104I CTCTTC 3 cut(s) 151, 1029, 1735
EarI CTCTTC 3 cut(s) 151, 1029, 1735
Eco130I CCWWGG 1 cut(s) 1103
Eco147I AGGCCT 1 cut(s) 246
Eco31I GGTCTC 1 cut(s) 448
Eco32I GATATC 1 cut(s) 953
Eco47I GGWCC 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 27
Eco91I GGTNACC 1 cut(s) 1768
EcoO65I GGTNACC 1 cut(s) 1768
EcoRI GAATTC 1 cut(s) 1441
EcoRV GATATC 1 cut(s) 953
EcoT14I CCWWGG 1 cut(s) 1103
ErhI CCWWGG 1 cut(s) 1103
FalI AAGNNNNNCTT 2 cut(s) 1155, 1187
FaqI GGGAC 1 cut(s) 1345
FbaI TGATCA 1 cut(s) 630
FblI GTMKAC 1 cut(s) 428
Fnu4HI GCNGC 5 cut(s) 66, 297, 528, 618, 621
FokI GGATG 5 cut(s) 493, 1253, 1403, 1497, 1766
Fsp4HI GCNGC 5 cut(s) 66, 297, 528, 618, 621
FspBI CTAG 3 cut(s) 344, 585, 1746
FspI TGCGCA 1 cut(s) 417
GlaI GCGC 1 cut(s) 417
GluI GCNGC 5 cut(s) 66, 297, 528, 618, 621
GsuI CTGGAG 3 cut(s) 879, 1174, 1439
HaeIII GGCC 4 cut(s) 246, 266, 402, 1371
HapII CCGG 2 cut(s) 887, 1469
HgaI GACGC 1 cut(s) 1316
HhaI GCGC 1 cut(s) 418
Hin6I GCGC 1 cut(s) 416
HinP1I GCGC 1 cut(s) 416
HindIII AAGCTT 3 cut(s) 332, 449, 1566
HinfI GANTC 4 cut(s) 425, 473, 638, 1535
HpaII CCGG 2 cut(s) 887, 1469
HphI GGTGA 3 cut(s) 1341, 1537, 1721
Hpy166II GTNNAC 2 cut(s) 429, 1133
Hpy188I TCNGA 4 cut(s) 459, 643, 1267, 1381
Hpy188III TCNNGA 9 cut(s) 585, 908, 956, 964, 1191, 1291, 1460, 1562, 1604
Hpy8I GTNNAC 2 cut(s) 429, 1133
HpyAV CCTTC 6 cut(s) 148, 363, 1145, 1428, 1502, 1781
HpyCH4III ACNGT 3 cut(s) 575, 930, 1340
HpyCH4IV ACGT 1 cut(s) 1550
HpyCH4V TGCA 8 cut(s) 156, 467, 479, 483, 617, 746, 1361, 1694
HpyF10VI GCNNNNNNNGC 3 cut(s) 524, 1487, 1661
HpyF3I CTNAG 4 cut(s) 116, 128, 754, 1353
HpySE526I ACGT 1 cut(s) 1550
HspAI GCGC 1 cut(s) 416
Ksp22I TGATCA 1 cut(s) 630
Kzo9I GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
LguI GCTCTTC 1 cut(s) 1735
LmnI GCTCC 1 cut(s) 996
Lsp1109I GCAGC 4 cut(s) 52, 308, 629, 632
LweI GCATC 3 cut(s) 505, 900, 1788
MaeI CTAG 3 cut(s) 344, 585, 1746
MaeII ACGT 1 cut(s) 1550
MaeIII GTNAC 7 cut(s) 394, 569, 697, 739, 1347, 1471, 1768
MalI GATC 6 cut(s) 114, 632, 1101, 1215, 1611, 1620
MbiI CCGCTC 1 cut(s) 734
MboI GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
MflI RGATCY 2 cut(s) 1213, 1609
MlsI TGGCCA 1 cut(s) 1371
MluNI TGGCCA 1 cut(s) 1371
MlyI GAGTC 3 cut(s) 434, 467, 632
MmeI TCCRAC 2 cut(s) 1018, 1218
Mox20I TGGCCA 1 cut(s) 1371
MscI TGGCCA 1 cut(s) 1371
MseI TTAA 7 cut(s) 453, 536, 554, 896, 974, 1052, 1571
MslI CAYNNNNRTG 2 cut(s) 704, 1594
Msp20I TGGCCA 1 cut(s) 1371
MspA1I CMGCKG 1 cut(s) 623
MspI CCGG 2 cut(s) 887, 1469
MspR9I CCNGG 2 cut(s) 888, 1469
MwoI GCNNNNNNNGC 3 cut(s) 524, 1487, 1661
NciI CCSGG 2 cut(s) 888, 1469
NdeII GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
NlaIV GGNNCC 2 cut(s) 403, 661
NmuCI GTSAC 2 cut(s) 697, 1347
NsbI TGCGCA 1 cut(s) 417
NspI RCATGY 4 cut(s) 105, 483, 1069, 1651
NspV TTCGAA 2 cut(s) 1141, 1757
OliI CACNNNNGTG 1 cut(s) 704
PaeI GCATGC 1 cut(s) 483
PagI TCATGA 2 cut(s) 963, 1561
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 1 cut(s) 1647
PciSI GCTCTTC 1 cut(s) 1735
PfeI GAWTC 1 cut(s) 1535
PkrI GCNGC 5 cut(s) 67, 298, 529, 619, 622
PleI GAGTC 3 cut(s) 433, 467, 632
PpsI GAGTC 3 cut(s) 433, 467, 632
PscI ACATGT 1 cut(s) 1647
PshBI ATTAAT 2 cut(s) 554, 1052
PsiI TTATAA 1 cut(s) 1716
PspEI GGTNACC 1 cut(s) 1768
PspN4I GGNNCC 2 cut(s) 403, 661
PspPI GGNCC 2 cut(s) 198, 401
PstI CTGCAG 1 cut(s) 748
PstNI CAGNNNCTG 1 cut(s) 623
PsuI RGATCY 2 cut(s) 1213, 1609
PvuII CAGCTG 1 cut(s) 623
RsaI GTAC 4 cut(s) 599, 1064, 1156, 1170
RsaNI GTAC 4 cut(s) 598, 1063, 1155, 1169
RseI CAYNNNNRTG 2 cut(s) 704, 1594
SapI GCTCTTC 1 cut(s) 1735
SaqAI TTAA 7 cut(s) 453, 536, 554, 896, 974, 1052, 1571
SatI GCNGC 5 cut(s) 66, 297, 528, 618, 621
Sau3AI GATC 6 cut(s) 112, 630, 1099, 1213, 1609, 1618
Sau96I GGNCC 2 cut(s) 198, 401
ScaI AGTACT 1 cut(s) 1170
SchI GAGTC 3 cut(s) 434, 467, 632
ScrFI CCNGG 2 cut(s) 888, 1469
SfaNI GCATC 3 cut(s) 505, 900, 1788
SfcI CTRYAG 1 cut(s) 744
SfuI TTCGAA 2 cut(s) 1141, 1757
SinI GGWCC 1 cut(s) 198
SmiMI CAYNNNNRTG 2 cut(s) 704, 1594
SmlI CTYRAG 2 cut(s) 260, 1161
SmoI CTYRAG 2 cut(s) 260, 1161
SphI GCATGC 1 cut(s) 483
SseBI AGGCCT 1 cut(s) 246
SsiI CCGC 3 cut(s) 527, 732, 1446
SspI AATATT 2 cut(s) 780, 841
SspMI CTAG 3 cut(s) 344, 585, 1746
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 2 cut(s) 886, 1467
StyI CCWWGG 1 cut(s) 1103
TaaI ACNGT 3 cut(s) 575, 930, 1340
TaiI ACGT 1 cut(s) 1553
TaqI TCGA 6 cut(s) 1075, 1141, 1290, 1621, 1757, 1792
TatI WGTACW 2 cut(s) 1062, 1168
TauI GCSGC 1 cut(s) 530
TfiI GAWTC 1 cut(s) 1535
Tru1I TTAA 7 cut(s) 453, 536, 554, 896, 974, 1052, 1571
Tru9I TTAA 7 cut(s) 453, 536, 554, 896, 974, 1052, 1571
TscAI CASTG 2 cut(s) 469, 1545
TseFI GTSAC 2 cut(s) 697, 1347
TseI GCWGC 4 cut(s) 65, 296, 617, 620
Tsp45I GTSAC 2 cut(s) 697, 1347
TspRI CASTG 2 cut(s) 469, 1545
VpaK11BI GGWCC 1 cut(s) 198
VspI ATTAAT 2 cut(s) 554, 1052
XapI RAATTY 6 cut(s) 160, 304, 540, 1088, 1260, 1441
XbaI TCTAGA 1 cut(s) 584
XceI RCATGY 4 cut(s) 105, 483, 1069, 1651
XmiI GTMKAC 1 cut(s) 428
XspI CTAG 3 cut(s) 344, 585, 1746
ZrmI AGTACT 1 cut(s) 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.