Rh1CG075500

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000114
Physical Location & Seq
Reverse (-)
15764735 .. 15768094
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG075500.1

Sequence Viewer

Length: 1425 bp
ATGAACCTTTTTTTCCTTCCTCTGTCTCACTGTTTCCGAATGGGGTGGCTCTTGTGTTACCTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTGCCAAGACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATCCCCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCGGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGACGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGATCCTAAAGTACCATTTCAGGCCTTTATCTGGAAGGAAGCTACTCCGTATTTTAGAAGTTCTGTGTACATTGGCCAGGATACAAGAACACAGTTTCAAAATCCAGGTGGAACTGCGTTTTTCTTTTCATACAACTTTGATGTTGATCAGGCTTATATTGTTTGCAGTGTCTCGGATAGCTCAGTAAAATGGAGGGCCTGGTTGGATCCCATGGGGCAACTTAAACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGAAGTAGGGGATTCACGGCCCGTTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCTGTGGCTGCATTAGGGAAAAGGTGTTGACAAGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACTTGTTTTGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTACTGGTGCAAATGATATTCATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGTAATAGTCTCTGCAGCAGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

474

Amino Acids

52.53

Weight (kDa)

7.06

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 185 1.7e-30 D-mannose binding lectin
S_locus_glycop PF00954 244 - 329 7.2e-14 S-locus glycoprotein domain
PAN_2 PF08276 358 - 419 9.6e-15 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 110
AccI GTMKAC 1 cut(s) 223
AciI CCGC 4 cut(s) 463, 912, 1004, 1351
AclWI GGATC 7 cut(s) 345, 563, 596, 800, 813, 1113, 1260
AcoI YGGCCR 2 cut(s) 529, 673
AcsI RAATTY 2 cut(s) 199, 841
AcyI GRCGYC 1 cut(s) 541
AdeI CACNNNGTG 1 cut(s) 459
AfaI GTAC 5 cut(s) 100, 120, 612, 668, 1177
AfeI AGCGCT 1 cut(s) 561
AfiI CCNNNNNNNGG 5 cut(s) 151, 578, 630, 1003, 1350
AgsI TTSAA 8 cut(s) 190, 232, 446, 517, 698, 1080, 1088, 1348
AjnI CCWGG 6 cut(s) 121, 496, 551, 675, 703, 797
AloI GAACNNNNNNTCC 2 cut(s) 417, 449
AluBI AGCT 8 cut(s) 266, 441, 468, 513, 641, 780, 1084, 1181
AluI AGCT 8 cut(s) 266, 441, 468, 513, 641, 780, 1084, 1181
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 3 cut(s) 30, 775, 1378
AlwI GGATC 7 cut(s) 345, 563, 596, 800, 813, 1113, 1260
Aor51HI AGCGCT 1 cut(s) 561
AoxI GGCC 5 cut(s) 529, 621, 673, 795, 878
ApeKI GCWGC 4 cut(s) 557, 1026, 1379, 1382
ApoI RAATTY 2 cut(s) 199, 841
AspLEI GCGC 1 cut(s) 562
AspS9I GGNCC 6 cut(s) 168, 795, 879, 914, 1017, 1353
AsuC2I CCSGG 2 cut(s) 294, 579
AsuHPI GGTGA 4 cut(s) 580, 945, 950, 1105
AvaII GGWCC 4 cut(s) 168, 914, 1017, 1353
BalI TGGCCA 2 cut(s) 531, 675
BamHI GGATCC 1 cut(s) 805
Bbv12I GWGCWC 1 cut(s) 75
BbvI GCAGC 4 cut(s) 569, 1013, 1391, 1394
BccI CCATC 2 cut(s) 311, 1199
BceAI ACGGC 2 cut(s) 893, 1075
BciT130I CCWGG 6 cut(s) 123, 498, 553, 677, 705, 799
BciVI GTATCC 2 cut(s) 412, 673
BclI TGATCA 1 cut(s) 745
BcnI CCSGG 2 cut(s) 294, 579
BcoDI GTCTC 3 cut(s) 30, 775, 1378
BfaI CTAG 5 cut(s) 345, 413, 846, 1256, 1316
BfmI CTRYAG 1 cut(s) 1377
BfoI RGCGCY 1 cut(s) 563
BfuAI ACCTGC 1 cut(s) 110
BfuI GTATCC 2 cut(s) 412, 673
BisI GCNGC 4 cut(s) 558, 1027, 1380, 1383
BlpI GCTNAGC 1 cut(s) 308
BlsI GCNGC 4 cut(s) 559, 1028, 1381, 1384
Bme1390I CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
Bme18I GGWCC 4 cut(s) 168, 914, 1017, 1353
BmgT120I GGNCC 6 cut(s) 168, 795, 879, 914, 1017, 1353
BmiI GGNNCC 5 cut(s) 169, 807, 916, 1309, 1355
BmrFI CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
BmsI GCATC 1 cut(s) 380
BplI GAGNNNNNCTC 2 cut(s) 1133, 1165
Bpu1102I GCTNAGC 1 cut(s) 308
BpuMI CCSGG 2 cut(s) 294, 579
BsaBI GATNNNNATC 2 cut(s) 321, 744
BsaHI GRCGYC 1 cut(s) 541
BsaJI CCNNGG 4 cut(s) 163, 217, 552, 810
BsaWI WCCGGW 1 cut(s) 422
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 578, 630, 1003, 1350
Bse1I ACTGG 5 cut(s) 409, 532, 976, 1254, 1279
Bse3DI GCAATG 2 cut(s) 396, 907
Bse8I GATNNNNATC 2 cut(s) 321, 744
BseBI CCWGG 6 cut(s) 123, 498, 553, 677, 705, 799
BseDI CCNNGG 4 cut(s) 163, 217, 552, 810
BseGI GGATG 3 cut(s) 371, 475, 548
BseJI GATNNNNATC 2 cut(s) 321, 744
BseLI CCNNNNNNNGG 5 cut(s) 151, 578, 630, 1003, 1350
BseMI GCAATG 2 cut(s) 396, 907
BseMII CTCAG 3 cut(s) 322, 428, 795
BseNI ACTGG 5 cut(s) 409, 532, 976, 1254, 1279
BseXI GCAGC 4 cut(s) 569, 1013, 1391, 1394
BshFI GGCC 5 cut(s) 531, 623, 675, 797, 880
BsiHKAI GWGCWC 1 cut(s) 75
BsiSI CCGG 4 cut(s) 293, 423, 579, 1103
BslFI GGGAC 3 cut(s) 181, 900, 1234
BslI CCNNNNNNNGG 5 cut(s) 151, 578, 630, 1003, 1350
BsmAI GTCTC 3 cut(s) 30, 775, 1378
BsmFI GGGAC 3 cut(s) 181, 900, 1234
BsmI GAATGC 1 cut(s) 1160
BsnI GGCC 5 cut(s) 531, 623, 675, 797, 880
Bsp1286I GDGCHC 1 cut(s) 75
Bsp1407I TGTACA 2 cut(s) 666, 1175
Bsp143I GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
Bsp1720I GCTNAGC 1 cut(s) 308
Bsp19I CCATGG 1 cut(s) 810
BspACI CCGC 4 cut(s) 463, 912, 1004, 1351
BspANI GGCC 5 cut(s) 531, 623, 675, 797, 880
BspCNI CTCAG 3 cut(s) 321, 429, 794
BspLI GGNNCC 5 cut(s) 169, 807, 916, 1309, 1355
BspMAI CTGCAG 1 cut(s) 1381
BspMI ACCTGC 1 cut(s) 110
BspPI GGATC 7 cut(s) 345, 563, 596, 800, 813, 1113, 1260
BsrDI GCAATG 2 cut(s) 396, 907
BsrGI TGTACA 2 cut(s) 666, 1175
BsrI ACTGG 5 cut(s) 409, 532, 976, 1254, 1279
BssECI CCNNGG 4 cut(s) 163, 217, 552, 810
BssMI GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
BssNAI GTATAC 1 cut(s) 224
BssNI GRCGYC 1 cut(s) 541
BssT1I CCWWGG 3 cut(s) 163, 217, 810
Bst1107I GTATAC 1 cut(s) 224
Bst2UI CCWGG 6 cut(s) 123, 498, 553, 677, 705, 799
Bst4CI ACNGT 4 cut(s) 32, 70, 693, 1169
BstACI GRCGYC 1 cut(s) 541
BstAUI TGTACA 2 cut(s) 666, 1175
BstC8I GCNNGC 1 cut(s) 1160
BstDEI CTNAG 3 cut(s) 308, 437, 781
BstDSI CCRYGG 1 cut(s) 810
BstEII GGTNACC 1 cut(s) 140
BstF5I GGATG 3 cut(s) 371, 475, 548
BstH2I RGCGCY 1 cut(s) 563
BstHHI GCGC 1 cut(s) 562
BstKTI GATC 8 cut(s) 340, 475, 571, 604, 748, 808, 1108, 1255
BstMAI GTCTC 3 cut(s) 30, 775, 1378
BstMBI GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
BstMWI GCNNNNNNNGC 1 cut(s) 835
BstNI CCWGG 6 cut(s) 123, 498, 553, 677, 705, 799
BstPI GGTNACC 1 cut(s) 140
BstSCI CCNGG 8 cut(s) 121, 292, 496, 551, 577, 675, 703, 797
BstSFI CTRYAG 1 cut(s) 1377
BstV1I GCAGC 4 cut(s) 569, 1013, 1391, 1394
BstX2I RGATCY 3 cut(s) 601, 805, 1252
BstYI RGATCY 3 cut(s) 601, 805, 1252
BstZ17I GTATAC 1 cut(s) 224
BsuI GTATCC 2 cut(s) 412, 673
BsuRI GGCC 5 cut(s) 531, 623, 675, 797, 880
BtgI CCRYGG 1 cut(s) 810
BtsCI GGATG 3 cut(s) 371, 475, 548
BtsI GCAGTG 2 cut(s) 319, 772
BtsIMutI CAGTG 5 cut(s) 28, 75, 142, 319, 772
BveI ACCTGC 1 cut(s) 110
Cac8I GCNNGC 1 cut(s) 1160
CfoI GCGC 1 cut(s) 562
Cfr13I GGNCC 6 cut(s) 168, 795, 879, 914, 1017, 1353
CseI GACGC 1 cut(s) 549
Csp6I GTAC 5 cut(s) 99, 119, 611, 667, 1176
CviAII CATG 4 cut(s) 811, 957, 1233, 1304
CviQI GTAC 5 cut(s) 99, 119, 611, 667, 1176
DdeI CTNAG 3 cut(s) 308, 437, 781
DpnI GATC 8 cut(s) 339, 474, 570, 603, 747, 807, 1107, 1254
DpnII GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
DraIII CACNNNGTG 1 cut(s) 459
EaeI YGGCCR 2 cut(s) 529, 673
EciI GGCGGA 1 cut(s) 478
Eco130I CCWWGG 3 cut(s) 163, 217, 810
Eco147I AGGCCT 1 cut(s) 623
Eco32I GATATC 1 cut(s) 889
Eco47I GGWCC 4 cut(s) 168, 914, 1017, 1353
Eco47III AGCGCT 1 cut(s) 561
Eco91I GGTNACC 1 cut(s) 140
EcoO109I RGGNCCY 2 cut(s) 168, 795
EcoO65I GGTNACC 1 cut(s) 140
EcoRI GAATTC 1 cut(s) 841
EcoRII CCWGG 6 cut(s) 121, 496, 551, 675, 703, 797
EcoRV GATATC 1 cut(s) 889
EcoT14I CCWWGG 3 cut(s) 163, 217, 810
ErhI CCWWGG 3 cut(s) 163, 217, 810
FaeI CATG 4 cut(s) 814, 960, 1236, 1307
FalI AAGNNNNNCTT 4 cut(s) 497, 529, 575, 607
FaqI GGGAC 3 cut(s) 181, 900, 1234
FatI CATG 4 cut(s) 810, 956, 1232, 1303
FbaI TGATCA 1 cut(s) 745
FblI GTMKAC 1 cut(s) 223
Fnu4HI GCNGC 4 cut(s) 558, 1027, 1380, 1383
FokI GGATG 3 cut(s) 358, 462, 535
Fsp4HI GCNGC 4 cut(s) 558, 1027, 1380, 1383
FspBI CTAG 5 cut(s) 345, 413, 846, 1256, 1316
GlaI GCGC 1 cut(s) 561
GluI GCNGC 4 cut(s) 558, 1027, 1380, 1383
HaeII RGCGCY 1 cut(s) 563
HaeIII GGCC 5 cut(s) 531, 623, 675, 797, 880
HapII CCGG 4 cut(s) 293, 423, 579, 1103
HgaI GACGC 1 cut(s) 549
HhaI GCGC 1 cut(s) 562
Hin1I GRCGYC 1 cut(s) 541
Hin1II CATG 4 cut(s) 814, 960, 1236, 1307
Hin6I GCGC 1 cut(s) 560
HinP1I GCGC 1 cut(s) 560
HincII GTYRAC 2 cut(s) 363, 1047
HindII GTYRAC 2 cut(s) 363, 1047
HindIII AAGCTT 1 cut(s) 1082
HinfI GANTC 6 cut(s) 228, 275, 287, 394, 872, 1148
HpaII CCGG 4 cut(s) 293, 423, 579, 1103
HphI GGTGA 4 cut(s) 580, 945, 950, 1105
Hpy166II GTNNAC 6 cut(s) 224, 363, 588, 667, 941, 1047
Hpy188I TCNGA 8 cut(s) 38, 342, 438, 484, 775, 993, 1153, 1312
Hpy188III TCNNGA 2 cut(s) 194, 631
Hpy8I GTNNAC 6 cut(s) 224, 363, 588, 667, 941, 1047
HpyAV CCTTC 3 cut(s) 26, 601, 628
HpyCH4III ACNGT 4 cut(s) 32, 70, 693, 1169
HpyCH4IV ACGT 1 cut(s) 854
HpyCH4V TGCA 8 cut(s) 251, 389, 765, 960, 1029, 1232, 1280, 1379
HpyF10VI GCNNNNNNNGC 1 cut(s) 835
HpyF3I CTNAG 3 cut(s) 308, 437, 781
HpySE526I ACGT 1 cut(s) 854
Hsp92I GRCGYC 1 cut(s) 541
Hsp92II CATG 4 cut(s) 814, 960, 1236, 1307
HspAI GCGC 1 cut(s) 560
Ksp22I TGATCA 1 cut(s) 745
Kzo9I GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
LmnI GCTCC 2 cut(s) 465, 1313
Lsp1109I GCAGC 4 cut(s) 569, 1013, 1391, 1394
LweI GCATC 1 cut(s) 380
MaeI CTAG 5 cut(s) 345, 413, 846, 1256, 1316
MaeII ACGT 1 cut(s) 854
MaeIII GTNAC 7 cut(s) 56, 64, 140, 451, 1055, 1070, 1145
MalI GATC 8 cut(s) 339, 474, 570, 603, 747, 807, 1107, 1254
MboI GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
MboII GAAGA 3 cut(s) 150, 178, 458
MflI RGATCY 3 cut(s) 601, 805, 1252
MhlI GDGCHC 1 cut(s) 75
MlsI TGGCCA 2 cut(s) 531, 675
MluCI AATT 6 cut(s) 114, 199, 841, 1244, 1339, 1362
MluNI TGGCCA 2 cut(s) 531, 675
MlyI GAGTC 1 cut(s) 1142
MmeI TCCRAC 4 cut(s) 315, 783, 840, 1369
MnlI CCTC 5 cut(s) 30, 409, 490, 786, 929
Mox20I TGGCCA 2 cut(s) 531, 675
MscI TGGCCA 2 cut(s) 531, 675
MseI TTAA 3 cut(s) 504, 822, 1338
MslI CAYNNNNRTG 5 cut(s) 135, 256, 955, 961, 1296
Msp20I TGGCCA 2 cut(s) 531, 675
MspI CCGG 4 cut(s) 293, 423, 579, 1103
MspR9I CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
Mva1269I GAATGC 1 cut(s) 1160
MvaI CCWGG 6 cut(s) 123, 498, 553, 677, 705, 799
MwoI GCNNNNNNNGC 1 cut(s) 835
NciI CCSGG 2 cut(s) 294, 579
NcoI CCATGG 1 cut(s) 810
NdeII GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
NlaIII CATG 4 cut(s) 814, 960, 1236, 1307
NlaIV GGNNCC 5 cut(s) 169, 807, 916, 1309, 1355
NmuCI GTSAC 2 cut(s) 451, 1145
PceI AGGCCT 1 cut(s) 623
PctI GAATGC 1 cut(s) 1160
PfeI GAWTC 5 cut(s) 228, 275, 287, 394, 872
PkrI GCNGC 4 cut(s) 559, 1028, 1381, 1384
PleI GAGTC 1 cut(s) 1142
PpsI GAGTC 1 cut(s) 1142
PpuMI RGGWCCY 1 cut(s) 168
Psp5II RGGWCCY 1 cut(s) 168
Psp6I CCWGG 6 cut(s) 121, 496, 551, 675, 703, 797
PspEI GGTNACC 1 cut(s) 140
PspGI CCWGG 6 cut(s) 121, 496, 551, 675, 703, 797
PspN4I GGNNCC 5 cut(s) 169, 807, 916, 1309, 1355
PspPI GGNCC 6 cut(s) 168, 795, 879, 914, 1017, 1353
PspPPI RGGWCCY 1 cut(s) 168
PstI CTGCAG 1 cut(s) 1381
PsuI RGATCY 3 cut(s) 601, 805, 1252
RsaI GTAC 5 cut(s) 100, 120, 612, 668, 1177
RsaNI GTAC 5 cut(s) 99, 119, 611, 667, 1176
RseI CAYNNNNRTG 5 cut(s) 135, 256, 955, 961, 1296
SaqAI TTAA 3 cut(s) 504, 822, 1338
SatI GCNGC 4 cut(s) 558, 1027, 1380, 1383
Sau3AI GATC 8 cut(s) 337, 472, 568, 601, 745, 805, 1105, 1252
Sau96I GGNCC 6 cut(s) 168, 795, 879, 914, 1017, 1353
SchI GAGTC 1 cut(s) 1142
ScrFI CCNGG 8 cut(s) 123, 294, 498, 553, 579, 677, 705, 799
SduI GDGCHC 1 cut(s) 75
SfaNI GCATC 1 cut(s) 380
SfcI CTRYAG 1 cut(s) 1377
SinI GGWCC 4 cut(s) 168, 914, 1017, 1353
SmiMI CAYNNNNRTG 5 cut(s) 135, 256, 955, 961, 1296
Sse9I AATT 6 cut(s) 114, 199, 841, 1244, 1339, 1362
SseBI AGGCCT 1 cut(s) 623
SsiI CCGC 4 cut(s) 463, 912, 1004, 1351
SspI AATATT 1 cut(s) 1216
SspMI CTAG 5 cut(s) 345, 413, 846, 1256, 1316
StuI AGGCCT 1 cut(s) 623
StyD4I CCNGG 8 cut(s) 121, 292, 496, 551, 577, 675, 703, 797
StyI CCWWGG 3 cut(s) 163, 217, 810
TaaI ACNGT 4 cut(s) 32, 70, 693, 1169
TaiI ACGT 1 cut(s) 857
TaqI TCGA 1 cut(s) 471
TasI AATT 6 cut(s) 114, 199, 841, 1244, 1339, 1362
TatI WGTACW 2 cut(s) 666, 1175
TfiI GAWTC 5 cut(s) 228, 275, 287, 394, 872
Tru1I TTAA 3 cut(s) 504, 822, 1338
Tru9I TTAA 3 cut(s) 504, 822, 1338
TscAI CASTG 5 cut(s) 35, 75, 142, 319, 772
TseFI GTSAC 2 cut(s) 451, 1145
TseI GCWGC 4 cut(s) 557, 1026, 1379, 1382
Tsp45I GTSAC 2 cut(s) 451, 1145
TspDTI ATGAA 6 cut(s) 17, 165, 407, 717, 1280, 1292
TspGWI ACGGA 3 cut(s) 364, 636, 1324
TspRI CASTG 5 cut(s) 35, 75, 142, 319, 772
VpaK11BI GGWCC 4 cut(s) 168, 914, 1017, 1353
XapI RAATTY 2 cut(s) 199, 841
XmiI GTMKAC 1 cut(s) 223
XspI CTAG 5 cut(s) 345, 413, 846, 1256, 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.