Rh1CG075800

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000114
Physical Location & Seq
Reverse (-)
15773941 .. 15810514
36574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG075800.1

Sequence Viewer

Length: 1326 bp
ATGGGGTGGCTCCTGTGTTACGTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTGCCAAGACAAAATTGTACCAGGACAGCATATCAGTGGTAACTTGACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATCCCCGACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATTCCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGGAAGTTCACCTTCGGCATAGATCCTAAAGTACCAGTTCAGTCCTTTGTCTGGAAGGAAACTACTCCGTATGCTAGAAGTTCTGTGTACATTGGCCAGGATACAAGAACACAGTTTCAAAATCCAGGTGGAACTGCGTTTTTCTATTCATTCAACTTTGATGTTGATGAGGTTTATCTTGCTTGCAGTGTCTCGGATAGCTCAGTAAAATGGAGGGCCTGGTTGGATCCCACGGGGCAACTTAAACAGCAGTTGTGGCAGTATTCTAGTAAAACGTGGTTGGAAGTAGGGAATTCATGGCCCGTTGATATATGTGATTTTTATGCTCATTGCGGTCCCAACAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTCCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTTTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAGAACTGTTCTTGTACAGCTTATGCTTATGTAAACGCGACAGATGGAAGTAATATTGGGACTTGTTTGGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTATTGGTGCACATGATATTTATATTCGTGTTCATGGCTCCGAACTAGGTATGTATTTAGTTTTTTGCTATTTTCTTTGTGGATGTGTAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

441

Amino Acids

49.01

Weight (kDa)

5.78

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 172 2e-31 D-mannose binding lectin
S_locus_glycop PF00954 226 - 316 4.6e-15 S-locus glycoprotein domain
PAN_2 PF08276 345 - 406 3.8e-14 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 501
AccI GTMKAC 1 cut(s) 184
AccII CGCG 1 cut(s) 1160
AccIII TCCGGA 1 cut(s) 383
AciI CCGC 2 cut(s) 873, 965
AclWI GGATC 7 cut(s) 306, 524, 557, 761, 774, 1074, 1221
AcoI YGGCCR 2 cut(s) 490, 634
AcsI RAATTY 2 cut(s) 160, 832
AcyI GRCGYC 1 cut(s) 502
AdeI CACNNNGTG 1 cut(s) 420
AfaI GTAC 5 cut(s) 61, 81, 573, 629, 1138
AfeI AGCGCT 1 cut(s) 522
AfiI CCNNNNNNNGG 3 cut(s) 539, 591, 964
AflIII ACRYGT 1 cut(s) 1010
AgsI TTSAA 7 cut(s) 151, 193, 407, 478, 659, 694, 1049
AjnI CCWGG 6 cut(s) 82, 457, 512, 636, 664, 758
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
AluBI AGCT 7 cut(s) 227, 402, 429, 474, 741, 1045, 1142
AluI AGCT 7 cut(s) 227, 402, 429, 474, 741, 1045, 1142
Alw21I GWGCWC 2 cut(s) 36, 1243
Alw26I GTCTC 1 cut(s) 736
Alw44I GTGCAC 1 cut(s) 1239
AlwI GGATC 7 cut(s) 306, 524, 557, 761, 774, 1074, 1221
AlwNI CAGNNNCTG 2 cut(s) 888, 987
Ama87I CYCGRG 1 cut(s) 539
Aor13HI TCCGGA 1 cut(s) 383
Aor51HI AGCGCT 1 cut(s) 522
AoxI GGCC 4 cut(s) 490, 634, 756, 839
ApaLI GTGCAC 1 cut(s) 1239
ApeKI GCWGC 2 cut(s) 518, 987
ApoI RAATTY 2 cut(s) 160, 832
AspLEI GCGC 2 cut(s) 504, 523
AspS9I GGNCC 5 cut(s) 129, 756, 840, 875, 978
AsuC2I CCSGG 3 cut(s) 255, 540, 541
AsuHPI GGTGA 4 cut(s) 541, 906, 911, 1066
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 3 cut(s) 129, 875, 978
BaeGI GKGCMC 1 cut(s) 1243
BalI TGGCCA 2 cut(s) 492, 636
BamHI GGATCC 1 cut(s) 766
BanI GGYRCC 1 cut(s) 501
Bbv12I GWGCWC 2 cut(s) 36, 1243
BbvI GCAGC 2 cut(s) 530, 974
BccI CCATC 2 cut(s) 272, 1160
BceAI ACGGC 1 cut(s) 1036
BciT130I CCWGG 6 cut(s) 84, 459, 514, 638, 666, 760
BciVI GTATCC 1 cut(s) 634
BcnI CCSGG 3 cut(s) 255, 540, 541
BcoDI GTCTC 1 cut(s) 736
BfaI CTAG 6 cut(s) 306, 374, 615, 807, 1217, 1277
BfoI RGCGCY 2 cut(s) 505, 524
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 1 cut(s) 634
BisI GCNGC 2 cut(s) 519, 988
BlpI GCTNAGC 1 cut(s) 269
BlsI GCNGC 2 cut(s) 520, 989
Bme1390I CCNGG 9 cut(s) 84, 255, 459, 514, 540, 541, 638, 666, 760
Bme18I GGWCC 3 cut(s) 129, 875, 978
BmeT110I CYCGRG 1 cut(s) 539
BmgT120I GGNCC 5 cut(s) 129, 756, 840, 875, 978
BmiI GGNNCC 6 cut(s) 11, 130, 503, 768, 877, 1270
BmrFI CCNGG 9 cut(s) 84, 255, 459, 514, 540, 541, 638, 666, 760
BmsI GCATC 1 cut(s) 341
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
Bpu1102I GCTNAGC 1 cut(s) 269
BpuMI CCSGG 3 cut(s) 255, 540, 541
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 502
BsaJI CCNNGG 5 cut(s) 124, 178, 513, 539, 771
BsaWI WCCGGW 1 cut(s) 383
Bsc4I CCNNNNNNNGG 3 cut(s) 539, 591, 964
Bse1I ACTGG 6 cut(s) 370, 493, 575, 937, 981, 1215
Bse3DI GCAATG 2 cut(s) 357, 868
Bse8I GATNNNNATC 1 cut(s) 282
BseAI TCCGGA 1 cut(s) 383
BseBI CCWGG 6 cut(s) 84, 459, 514, 638, 666, 760
BseDI CCNNGG 5 cut(s) 124, 178, 513, 539, 771
BseGI GGATG 4 cut(s) 332, 436, 509, 1319
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 3 cut(s) 539, 591, 964
BseMI GCAATG 2 cut(s) 357, 868
BseMII CTCAG 3 cut(s) 283, 389, 756
BseNI ACTGG 6 cut(s) 370, 493, 575, 937, 981, 1215
BseSI GKGCMC 1 cut(s) 1243
BseXI GCAGC 2 cut(s) 530, 974
Bsh1236I CGCG 1 cut(s) 1160
BshFI GGCC 4 cut(s) 492, 636, 758, 841
BshNI GGYRCC 1 cut(s) 501
BsiHKAI GWGCWC 2 cut(s) 36, 1243
BsiHKCI CYCGRG 1 cut(s) 539
BsiSI CCGG 4 cut(s) 254, 384, 540, 1064
BslFI GGGAC 3 cut(s) 142, 861, 1195
BslI CCNNNNNNNGG 3 cut(s) 539, 591, 964
BsmAI GTCTC 1 cut(s) 736
BsmFI GGGAC 3 cut(s) 142, 861, 1195
BsmI GAATGC 1 cut(s) 1121
BsnI GGCC 4 cut(s) 492, 636, 758, 841
BsoBI CYCGRG 1 cut(s) 539
Bsp1286I GDGCHC 2 cut(s) 36, 1243
Bsp13I TCCGGA 1 cut(s) 383
Bsp1407I TGTACA 2 cut(s) 627, 1136
Bsp143I GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
Bsp1720I GCTNAGC 1 cut(s) 269
BspACI CCGC 2 cut(s) 873, 965
BspANI GGCC 4 cut(s) 492, 636, 758, 841
BspCNI CTCAG 3 cut(s) 282, 390, 755
BspEI TCCGGA 1 cut(s) 383
BspFNI CGCG 1 cut(s) 1160
BspLI GGNNCC 6 cut(s) 11, 130, 503, 768, 877, 1270
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 7 cut(s) 306, 524, 557, 761, 774, 1074, 1221
BspT107I GGYRCC 1 cut(s) 501
BsrDI GCAATG 2 cut(s) 357, 868
BsrGI TGTACA 2 cut(s) 627, 1136
BsrI ACTGG 6 cut(s) 370, 493, 575, 937, 981, 1215
BssECI CCNNGG 5 cut(s) 124, 178, 513, 539, 771
BssMI GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
BssNAI GTATAC 1 cut(s) 185
BssNI GRCGYC 1 cut(s) 502
BssT1I CCWWGG 2 cut(s) 124, 178
Bst1107I GTATAC 1 cut(s) 185
Bst2UI CCWGG 6 cut(s) 84, 459, 514, 638, 666, 760
Bst4CI ACNGT 4 cut(s) 31, 654, 884, 1130
BstACI GRCGYC 1 cut(s) 502
BstAUI TGTACA 2 cut(s) 627, 1136
BstC8I GCNNGC 2 cut(s) 724, 1121
BstDEI CTNAG 3 cut(s) 269, 398, 742
BstDSI CCRYGG 1 cut(s) 771
BstF5I GGATG 4 cut(s) 332, 436, 509, 1319
BstFNI CGCG 1 cut(s) 1160
BstH2I RGCGCY 2 cut(s) 505, 524
BstHHI GCGC 2 cut(s) 504, 523
BstKTI GATC 7 cut(s) 301, 436, 532, 565, 769, 1069, 1216
BstMAI GTCTC 1 cut(s) 736
BstMBI GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
BstMWI GCNNNNNNNGC 1 cut(s) 796
BstNI CCWGG 6 cut(s) 84, 459, 514, 638, 666, 760
BstNSI RCATGY 1 cut(s) 1014
BstSCI CCNGG 9 cut(s) 82, 253, 457, 512, 538, 539, 636, 664, 758
BstSLI GKGCMC 1 cut(s) 1243
BstUI CGCG 1 cut(s) 1160
BstV1I GCAGC 2 cut(s) 530, 974
BstX2I RGATCY 3 cut(s) 562, 766, 1213
BstYI RGATCY 3 cut(s) 562, 766, 1213
BstZ17I GTATAC 1 cut(s) 185
BsuI GTATCC 1 cut(s) 634
BsuRI GGCC 4 cut(s) 492, 636, 758, 841
BtgI CCRYGG 1 cut(s) 771
BtsCI GGATG 4 cut(s) 332, 436, 509, 1319
BtsI GCAGTG 2 cut(s) 280, 733
BtsIMutI CAGTG 6 cut(s) 36, 103, 280, 733, 889, 988
BveI ACCTGC 1 cut(s) 71
Cac8I GCNNGC 2 cut(s) 724, 1121
CaiI CAGNNNCTG 2 cut(s) 888, 987
CfoI GCGC 2 cut(s) 504, 523
Cfr13I GGNCC 5 cut(s) 129, 756, 840, 875, 978
Cfr9I CCCGGG 1 cut(s) 539
Csp6I GTAC 5 cut(s) 60, 80, 572, 628, 1137
CviAII CATG 6 cut(s) 837, 918, 1011, 1194, 1244, 1265
CviQI GTAC 5 cut(s) 60, 80, 572, 628, 1137
DdeI CTNAG 3 cut(s) 269, 398, 742
DinI GGCGCC 1 cut(s) 503
DpnI GATC 7 cut(s) 300, 435, 531, 564, 768, 1068, 1215
DpnII GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
DraIII CACNNNGTG 1 cut(s) 420
EaeI YGGCCR 2 cut(s) 490, 634
Eco130I CCWWGG 2 cut(s) 124, 178
Eco47I GGWCC 3 cut(s) 129, 875, 978
Eco47III AGCGCT 1 cut(s) 522
Eco88I CYCGRG 1 cut(s) 539
EcoO109I RGGNCCY 2 cut(s) 129, 756
EcoRI GAATTC 1 cut(s) 832
EcoRII CCWGG 6 cut(s) 82, 457, 512, 636, 664, 758
EcoT14I CCWWGG 2 cut(s) 124, 178
EgeI GGCGCC 1 cut(s) 503
EheI GGCGCC 1 cut(s) 503
ErhI CCWWGG 2 cut(s) 124, 178
FaeI CATG 6 cut(s) 840, 921, 1014, 1197, 1247, 1268
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 536, 568
FaqI GGGAC 3 cut(s) 142, 861, 1195
FatI CATG 6 cut(s) 836, 917, 1010, 1193, 1243, 1264
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 2 cut(s) 519, 988
FokI GGATG 3 cut(s) 319, 423, 496
Fsp4HI GCNGC 2 cut(s) 519, 988
FspBI CTAG 6 cut(s) 306, 374, 615, 807, 1217, 1277
GlaI GCGC 2 cut(s) 503, 522
GluI GCNGC 2 cut(s) 519, 988
HaeII RGCGCY 2 cut(s) 505, 524
HaeIII GGCC 4 cut(s) 492, 636, 758, 841
HapII CCGG 4 cut(s) 254, 384, 540, 1064
HhaI GCGC 2 cut(s) 504, 523
Hin1I GRCGYC 1 cut(s) 502
Hin1II CATG 6 cut(s) 840, 921, 1014, 1197, 1247, 1268
Hin6I GCGC 2 cut(s) 502, 521
HinP1I GCGC 2 cut(s) 502, 521
HincII GTYRAC 2 cut(s) 324, 1008
HindII GTYRAC 2 cut(s) 324, 1008
HindIII AAGCTT 1 cut(s) 1043
HinfI GANTC 6 cut(s) 189, 236, 248, 355, 380, 1109
HpaII CCGG 4 cut(s) 254, 384, 540, 1064
HphI GGTGA 4 cut(s) 541, 906, 911, 1066
Hpy166II GTNNAC 8 cut(s) 185, 324, 549, 628, 902, 1008, 1156, 1241
Hpy188I TCNGA 7 cut(s) 303, 399, 445, 736, 954, 1114, 1273
Hpy188III TCNNGA 3 cut(s) 155, 384, 592
Hpy8I GTNNAC 8 cut(s) 185, 324, 549, 628, 902, 1008, 1156, 1241
HpyAV CCTTC 2 cut(s) 562, 589
HpyCH4III ACNGT 4 cut(s) 31, 654, 884, 1130
HpyCH4IV ACGT 2 cut(s) 21, 815
HpyCH4V TGCA 6 cut(s) 212, 350, 726, 921, 990, 1241
HpyF10VI GCNNNNNNNGC 1 cut(s) 796
HpyF3I CTNAG 3 cut(s) 269, 398, 742
HpySE526I ACGT 2 cut(s) 21, 815
Hsp92I GRCGYC 1 cut(s) 502
Hsp92II CATG 6 cut(s) 840, 921, 1014, 1197, 1247, 1268
HspAI GCGC 2 cut(s) 502, 521
KasI GGCGCC 1 cut(s) 501
Kpn2I TCCGGA 1 cut(s) 383
Kzo9I GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
LmnI GCTCC 2 cut(s) 15, 1274
Lsp1109I GCAGC 2 cut(s) 530, 974
LweI GCATC 1 cut(s) 341
MaeI CTAG 6 cut(s) 306, 374, 615, 807, 1217, 1277
MaeII ACGT 2 cut(s) 21, 815
MaeIII GTNAC 7 cut(s) 17, 25, 101, 412, 1016, 1031, 1106
MalI GATC 7 cut(s) 300, 435, 531, 564, 768, 1068, 1215
MboI GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
MboII GAAGA 3 cut(s) 111, 139, 419
MflI RGATCY 3 cut(s) 562, 766, 1213
MhlI GDGCHC 2 cut(s) 36, 1243
MlsI TGGCCA 2 cut(s) 492, 636
MluCI AATT 4 cut(s) 75, 160, 832, 1205
MluNI TGGCCA 2 cut(s) 492, 636
Mly113I GGCGCC 1 cut(s) 502
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 3 cut(s) 276, 744, 801
MnlI CCTC 5 cut(s) 370, 451, 703, 747, 890
Mox20I TGGCCA 2 cut(s) 492, 636
MroI TCCGGA 1 cut(s) 383
MscI TGGCCA 2 cut(s) 492, 636
MseI TTAA 2 cut(s) 465, 783
MslI CAYNNNNRTG 4 cut(s) 96, 217, 916, 922
Msp20I TGGCCA 2 cut(s) 492, 636
MspI CCGG 4 cut(s) 254, 384, 540, 1064
MspR9I CCNGG 9 cut(s) 84, 255, 459, 514, 540, 541, 638, 666, 760
Mva1269I GAATGC 1 cut(s) 1121
MvaI CCWGG 6 cut(s) 84, 459, 514, 638, 666, 760
MvnI CGCG 1 cut(s) 1160
MwoI GCNNNNNNNGC 1 cut(s) 796
NarI GGCGCC 1 cut(s) 502
NciI CCSGG 3 cut(s) 255, 540, 541
NdeII GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
NlaIII CATG 6 cut(s) 840, 921, 1014, 1197, 1247, 1268
NlaIV GGNNCC 6 cut(s) 11, 130, 503, 768, 877, 1270
NmuCI GTSAC 2 cut(s) 412, 1106
NspI RCATGY 1 cut(s) 1014
PciI ACATGT 1 cut(s) 1010
PctI GAATGC 1 cut(s) 1121
PfeI GAWTC 5 cut(s) 189, 236, 248, 355, 380
PkrI GCNGC 2 cut(s) 520, 989
PleI GAGTC 1 cut(s) 1103
PluTI GGCGCC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 1103
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 1 cut(s) 1010
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 6 cut(s) 82, 457, 512, 636, 664, 758
PspGI CCWGG 6 cut(s) 82, 457, 512, 636, 664, 758
PspN4I GGNNCC 6 cut(s) 11, 130, 503, 768, 877, 1270
PspPI GGNCC 5 cut(s) 129, 756, 840, 875, 978
PspPPI RGGWCCY 1 cut(s) 129
PstNI CAGNNNCTG 2 cut(s) 888, 987
PsuI RGATCY 3 cut(s) 562, 766, 1213
RsaI GTAC 5 cut(s) 61, 81, 573, 629, 1138
RsaNI GTAC 5 cut(s) 60, 80, 572, 628, 1137
RseI CAYNNNNRTG 4 cut(s) 96, 217, 916, 922
SaqAI TTAA 2 cut(s) 465, 783
SatI GCNGC 2 cut(s) 519, 988
Sau3AI GATC 7 cut(s) 298, 433, 529, 562, 766, 1066, 1213
Sau96I GGNCC 5 cut(s) 129, 756, 840, 875, 978
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 9 cut(s) 84, 255, 459, 514, 540, 541, 638, 666, 760
SduI GDGCHC 2 cut(s) 36, 1243
SfaNI GCATC 1 cut(s) 341
SfoI GGCGCC 1 cut(s) 503
SinI GGWCC 3 cut(s) 129, 875, 978
SmaI CCCGGG 1 cut(s) 541
SmiMI CAYNNNNRTG 4 cut(s) 96, 217, 916, 922
Sse9I AATT 4 cut(s) 75, 160, 832, 1205
SsiI CCGC 2 cut(s) 873, 965
SspDI GGCGCC 1 cut(s) 501
SspI AATATT 1 cut(s) 1177
SspMI CTAG 6 cut(s) 306, 374, 615, 807, 1217, 1277
StyD4I CCNGG 9 cut(s) 82, 253, 457, 512, 538, 539, 636, 664, 758
StyI CCWWGG 2 cut(s) 124, 178
TaaI ACNGT 4 cut(s) 31, 654, 884, 1130
TaiI ACGT 2 cut(s) 24, 818
TaqI TCGA 1 cut(s) 432
TasI AATT 4 cut(s) 75, 160, 832, 1205
TatI WGTACW 2 cut(s) 627, 1136
TfiI GAWTC 5 cut(s) 189, 236, 248, 355, 380
Tru1I TTAA 2 cut(s) 465, 783
Tru9I TTAA 2 cut(s) 465, 783
TscAI CASTG 6 cut(s) 36, 103, 280, 733, 889, 988
TseFI GTSAC 2 cut(s) 412, 1106
TseI GCWGC 2 cut(s) 518, 987
Tsp45I GTSAC 2 cut(s) 412, 1106
TspDTI ATGAA 5 cut(s) 126, 368, 678, 825, 1253
TspGWI ACGGA 2 cut(s) 325, 597
TspMI CCCGGG 1 cut(s) 539
TspRI CASTG 6 cut(s) 36, 103, 280, 733, 889, 988
VneI GTGCAC 1 cut(s) 1239
VpaK11BI GGWCC 3 cut(s) 129, 875, 978
XapI RAATTY 2 cut(s) 160, 832
XceI RCATGY 1 cut(s) 1014
XmaI CCCGGG 1 cut(s) 539
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 6 cut(s) 306, 374, 615, 807, 1217, 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.