MD09G1100600.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
7359426 .. 7359878
453 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1100600.v1.1.491

Sequence Viewer

Length: 453 bp
ATGGAGATGGAGTGGCTCTTAGTTTGTCTTGTTACATTACCATTCTTATTCTTTACTATGCCGTCCTGTGCCAGCCAAGCAAATTTAGCACCAGGGCAATCTGTCGGTCCAAACCAGACGATGATTTCTCCCGCAGGGAACTTCGCATTAGGCTTCTTCAGTCCTGAAAATTCTACCAAACACTTCCTTGGTATCTGTTACAGCAGAATGCCAAAGGCACCAGTAGTAGTATGGGTTGCTAACAGAGAATCCCCACTTGATCCTCCGGGTGTTTTCATGTTCCGTGGTGATGGAAAACTCGTTGTGTTGGATTCCATCATGTATGGGAAAGTTATCTGGTCTTCTGATGTATTATTTATTGAGTCTTATCTTCCAGAGAGTACAGAGATAAAAAAATATCTTCTTCTTATTTCACTTACTTACTCAACAAGACATTTACATCAGTATATATAG

Protein Analysis

151

Amino Acids

16.83

Weight (kDa)

6.26

Isoelectric Point (pI)

52.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 115 4.8e-06 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 217
AciI CCGC 1 cut(s) 132
AclWI GGATC 1 cut(s) 254
AcsI RAATTY 2 cut(s) 82, 169
AcuI CTGAAG 1 cut(s) 142
AfaI GTAC 1 cut(s) 382
AjnI CCWGG 1 cut(s) 91
AlwI GGATC 1 cut(s) 254
ApoI RAATTY 2 cut(s) 82, 169
AspS9I GGNCC 1 cut(s) 107
AsuC2I CCSGG 1 cut(s) 267
AsuHPI GGTGA 1 cut(s) 299
AvaII GGWCC 1 cut(s) 107
BanI GGYRCC 1 cut(s) 217
BbsI GAAGAC 1 cut(s) 333
BccI CCATC 2 cut(s) 284, 323
BceAI ACGGC 1 cut(s) 46
BciT130I CCWGG 1 cut(s) 93
BcnI CCSGG 1 cut(s) 267
Bme1390I CCNGG 2 cut(s) 93, 267
Bme18I GGWCC 1 cut(s) 107
BmgT120I GGNCC 1 cut(s) 107
BmiI GGNNCC 1 cut(s) 219
BmrFI CCNGG 2 cut(s) 93, 267
BpiI GAAGAC 1 cut(s) 333
BpuMI CCSGG 1 cut(s) 267
BsaJI CCNNGG 3 cut(s) 92, 187, 283
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bse1I ACTGG 1 cut(s) 221
BseBI CCWGG 1 cut(s) 93
BseDI CCNNGG 3 cut(s) 92, 187, 283
BseNI ACTGG 1 cut(s) 221
BshNI GGYRCC 1 cut(s) 217
BsiSI CCGG 1 cut(s) 266
BsmI GAATGC 1 cut(s) 213
Bsp143I GATC 1 cut(s) 259
BspACI CCGC 1 cut(s) 132
BspLI GGNNCC 1 cut(s) 219
BspPI GGATC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 217
BsrI ACTGG 1 cut(s) 221
BssECI CCNNGG 3 cut(s) 92, 187, 283
BssMI GATC 1 cut(s) 259
BssT1I CCWWGG 1 cut(s) 187
Bst2UI CCWGG 1 cut(s) 93
BstC8I GCNNGC 1 cut(s) 73
BstDEI CTNAG 1 cut(s) 19
BstDSI CCRYGG 1 cut(s) 283
BstKTI GATC 1 cut(s) 262
BstMBI GATC 1 cut(s) 259
BstMWI GCNNNNNNNGC 2 cut(s) 77, 86
BstNI CCWGG 1 cut(s) 93
BstSCI CCNGG 2 cut(s) 91, 265
BstV2I GAAGAC 1 cut(s) 333
BtgI CCRYGG 1 cut(s) 283
Cac8I GCNNGC 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 107
Csp6I GTAC 1 cut(s) 381
CviAII CATG 2 cut(s) 277, 319
CviJI RGCY 3 cut(s) 16, 75, 153
CviKI_1 RGCY 3 cut(s) 16, 75, 153
CviQI GTAC 1 cut(s) 381
DdeI CTNAG 1 cut(s) 19
DpnI GATC 1 cut(s) 261
DpnII GATC 1 cut(s) 259
Eco130I CCWWGG 1 cut(s) 187
Eco47I GGWCC 1 cut(s) 107
Eco57I CTGAAG 1 cut(s) 142
EcoRII CCWGG 1 cut(s) 91
EcoT14I CCWWGG 1 cut(s) 187
ErhI CCWWGG 1 cut(s) 187
FaeI CATG 2 cut(s) 280, 322
FaiI YATR 8 cut(s) 59, 232, 278, 320, 324, 447, 449, 451
FatI CATG 2 cut(s) 276, 318
FauI CCCGC 1 cut(s) 139
HapII CCGG 1 cut(s) 266
Hin1II CATG 2 cut(s) 280, 322
HinfI GANTC 3 cut(s) 248, 311, 362
HpaII CCGG 1 cut(s) 266
HphI GGTGA 1 cut(s) 299
Hpy188I TCNGA 1 cut(s) 346
Hpy188III TCNNGA 2 cut(s) 164, 374
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 86
HpyF3I CTNAG 1 cut(s) 19
Hsp92II CATG 2 cut(s) 280, 322
Kzo9I GATC 1 cut(s) 259
MaeIII GTNAC 2 cut(s) 31, 197
MalI GATC 1 cut(s) 261
MboI GATC 1 cut(s) 259
MboII GAAGA 5 cut(s) 148, 333, 362, 392, 395
MluCI AATT 2 cut(s) 82, 169
MlyI GAGTC 1 cut(s) 371
MmeI TCCRAC 1 cut(s) 288
MnlI CCTC 1 cut(s) 273
MspI CCGG 1 cut(s) 266
MspR9I CCNGG 2 cut(s) 93, 267
Mva1269I GAATGC 1 cut(s) 213
MvaI CCWGG 1 cut(s) 93
MwoI GCNNNNNNNGC 2 cut(s) 77, 86
NciI CCSGG 1 cut(s) 267
NdeII GATC 1 cut(s) 259
NlaIII CATG 2 cut(s) 280, 322
NlaIV GGNNCC 1 cut(s) 219
PctI GAATGC 1 cut(s) 213
PfeI GAWTC 2 cut(s) 248, 311
PleI GAGTC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 370
Psp6I CCWGG 1 cut(s) 91
PspGI CCWGG 1 cut(s) 91
PspN4I GGNNCC 1 cut(s) 219
PspPI GGNCC 1 cut(s) 107
RsaI GTAC 1 cut(s) 382
RsaNI GTAC 1 cut(s) 381
Sau3AI GATC 1 cut(s) 259
Sau96I GGNCC 1 cut(s) 107
SchI GAGTC 1 cut(s) 371
ScrFI CCNGG 2 cut(s) 93, 267
SinI GGWCC 1 cut(s) 107
Sse9I AATT 2 cut(s) 82, 169
SsiI CCGC 1 cut(s) 132
StyD4I CCNGG 2 cut(s) 91, 265
StyI CCWWGG 1 cut(s) 187
TaqII GACCGA 1 cut(s) 95
TasI AATT 2 cut(s) 82, 169
TatI WGTACW 1 cut(s) 380
TfiI GAWTC 2 cut(s) 248, 311
TspDTI ATGAA 1 cut(s) 265
TspGWI ACGGA 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 107
XapI RAATTY 2 cut(s) 82, 169
XcmI CCANNNNNNNNNTGG 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.