Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0000114

Physical Location & Seq

Genomic Coordinates Forward (+)

14846579 .. 14849692

Gene Structure 3114 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG125300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGTTTCCTTTCTTCGACACATTCAAAGTTAAAGTAGCCGAAACCAGAAAGCCTGACGCTGAGACCGAGTCACCAAACCCAAAAAAGGAGAATGGGGTCCAAGACGGAACGCCGAAGTTGCAGCGCGGTGCCTCAAGAGGCGGCGGCTGGCCTTTTATCCTAAGGCAACCTATTACCTGTGGGAGTGTCAAAAGCAACATCTCTTACCCCTTTTGGGGAGCGAACCGACCCGAATACTGTGGCAAATCTGGGTTCGAGGTCACATGCCAAGACGATGTCCCGATGATCAGCATGCAGAAAATCAATTTCAGAATTCTTAACATGAACAATAGCACTACTACACCAACTCCGACTGTGACAGTTGCAAGGCAGGATTATTGGGGGAAACTCTGTCCTGAGAGTTATATTGACACCAACCTCAACTTCTCTCTGTTTGACTACGCATCTGGGCCTCAAAACGTGTCATTTTACTATGGATGCAGTTCGACTGCAACTTCAGCTTTGTCAAGGTTAGGATTTAATTTTTCTAGTATCTCGCAGCCATGCAACGCTACCGTCACAGTTTCCTTTCTCACAGAGACGCAAATTGCTAAGCTTTCGGATCCATCTACCTTGGCCTCCTGTCAACCTGTGGTTTCGGTTCCGGTGTCTGCAGCAGCTGCTGATGCGCTTGACAACAATCAAACATCAACTATCCAGGATGCGATAGATGGTGGTTTTGAATTGAATGTGCAGAATAATGATACTGGTCTTTGCAACAATTGCGTGGCCTCAGGAGGATTTTGTGGGCAAAACACTACTAATGCTCAGTTCATTTGCTATACTTCAAATTCATCAACTCCAATTTCATCAATTCCAGAAATTTTATCAACTCCAGAAATTTTATCAACTCCAAATTCATCCAGTTCATCATCAGGTATCAATAATACGCTCTCTCTACCTATCAATATATATTATTATCTCTTTTGCTCTTTGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

326

Amino Acids

35.16

Weight (kDa)

4.76

Isoelectric Point (pI)

36.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	59 - 114	6.5e-14	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	191 - 277	5.7e-16	Wall-associated receptor kinase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000114)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica	MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica	Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis	pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis	RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata	RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora	Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii	Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa	Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha	Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana	Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	128
AccII	CGCG	1 cut(s)	126
AciI	CCGC	3 cut(s)	126, 141, 144
AclWI	GGATC	2 cut(s)	596, 609
AcsI	RAATTY	5 cut(s)	312, 829, 861, 879, 895
AcuI	CTGAAG	1 cut(s)	480
AfiI	CCNNNNNNNGG	3 cut(s)	85, 214, 215
AflIII	ACRYGT	1 cut(s)	459
AgsI	TTSAA	4 cut(s)	25, 722, 727, 828
AjnI	CCWGG	1 cut(s)	696
AjuI	GAANNNNNNNTTGG	2 cut(s)	407, 439
AluBI	AGCT	3 cut(s)	500, 595, 659
AluI	AGCT	3 cut(s)	500, 595, 659
Alw26I	GTCTC	2 cut(s)	56, 572
AlwI	GGATC	2 cut(s)	596, 609
AlwNI	CAGNNNCTG	2 cut(s)	659, 662
AoxI	GGCC	4 cut(s)	149, 449, 615, 768
ApeKI	GCWGC	5 cut(s)	121, 538, 653, 656, 659
ApoI	RAATTY	5 cut(s)	312, 829, 861, 879, 895
AspLEI	GCGC	2 cut(s)	126, 670
AspS9I	GGNCC	2 cut(s)	97, 449
AsuHPI	GGTGA	1 cut(s)	63
AvaII	GGWCC	1 cut(s)	97
AxyI	CCTNAGG	2 cut(s)	161, 772
BamHI	GGATCC	1 cut(s)	601
BanI	GGYRCC	1 cut(s)	128
BbvI	GCAGC	5 cut(s)	133, 550, 646, 665, 668
BccI	CCATC	2 cut(s)	613, 704
BciT130I	CCWGG	1 cut(s)	698
BclI	TGATCA	1 cut(s)	285
BcoDI	GTCTC	2 cut(s)	56, 572
BfaI	CTAG	1 cut(s)	528
BfmI	CTRYAG	1 cut(s)	651
BisI	GCNGC	7 cut(s)	122, 142, 145, 539, 654, 657, 660
BlpI	GCTNAGC	1 cut(s)	591
BlsI	GCNGC	7 cut(s)	123, 143, 146, 540, 655, 658, 661
Bme1390I	CCNGG	1 cut(s)	698
Bme18I	GGWCC	1 cut(s)	97
BmgT120I	GGNCC	2 cut(s)	97, 449
BmiI	GGNNCC	4 cut(s)	98, 130, 603, 642
BmrFI	CCNGG	1 cut(s)	698
BmsI	GCATC	4 cut(s)	452, 467, 655, 691
BpmI	CTGGAG	1 cut(s)	858
Bpu1102I	GCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	1 cut(s)	118
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	1 cut(s)	612
BsaWI	WCCGGW	1 cut(s)	643
BsaXI	ACNNNNNCTCC	2 cut(s)	331, 361
Bsc4I	CCNNNNNNNGG	3 cut(s)	85, 214, 215
Bse1I	ACTGG	2 cut(s)	751, 903
Bse21I	CCTNAGG	2 cut(s)	161, 772
BseBI	CCWGG	1 cut(s)	698
BseDI	CCNNGG	1 cut(s)	612
BseGI	GGATG	3 cut(s)	482, 706, 899
BseLI	CCNNNNNNNGG	3 cut(s)	85, 214, 215
BseMII	CTCAG	4 cut(s)	51, 387, 786, 821
BseNI	ACTGG	2 cut(s)	751, 903
BseXI	GCAGC	5 cut(s)	133, 550, 646, 665, 668
BsgI	GTGCAG	1 cut(s)	752
Bsh1236I	CGCG	1 cut(s)	126
BshFI	GGCC	4 cut(s)	151, 451, 617, 770
BshNI	GGYRCC	1 cut(s)	128
BsiSI	CCGG	1 cut(s)	644
BslFI	GGGAC	1 cut(s)	263
BslI	CCNNNNNNNGG	3 cut(s)	85, 214, 215
BsmAI	GTCTC	2 cut(s)	56, 572
BsmBI	CGTCTC	1 cut(s)	572
BsmFI	GGGAC	1 cut(s)	263
BsnI	GGCC	4 cut(s)	151, 451, 617, 770
Bso31I	GGTCTC	1 cut(s)	56
Bsp143I	GATC	2 cut(s)	285, 601
Bsp1720I	GCTNAGC	1 cut(s)	591
BspACI	CCGC	3 cut(s)	126, 141, 144
BspANI	GGCC	4 cut(s)	151, 451, 617, 770
BspCNI	CTCAG	4 cut(s)	52, 388, 785, 820
BspFNI	CGCG	1 cut(s)	126
BspLI	GGNNCC	4 cut(s)	98, 130, 603, 642
BspMAI	CTGCAG	1 cut(s)	655
BspPI	GGATC	2 cut(s)	596, 609
BspT107I	GGYRCC	1 cut(s)	128
BspTNI	GGTCTC	1 cut(s)	56
BsrI	ACTGG	2 cut(s)	751, 903
BssECI	CCNNGG	1 cut(s)	612
BssMI	GATC	2 cut(s)	285, 601
BssT1I	CCWWGG	1 cut(s)	612
Bst2UI	CCWGG	1 cut(s)	698
Bst4CI	ACNGT	5 cut(s)	239, 355, 361, 556, 562
BstAPI	GCANNNNNTGC	2 cut(s)	659, 762
BstC8I	GCNNGC	2 cut(s)	149, 293
BstDEI	CTNAG	6 cut(s)	60, 161, 396, 591, 772, 807
BstF5I	GGATG	3 cut(s)	482, 706, 899
BstFNI	CGCG	1 cut(s)	126
BstHHI	GCGC	2 cut(s)	126, 670
BstKTI	GATC	2 cut(s)	288, 604
BstMAI	GTCTC	2 cut(s)	56, 572
BstMBI	GATC	2 cut(s)	285, 601
BstMWI	GCNNNNNNNGC	5 cut(s)	118, 497, 659, 665, 762
BstNI	CCWGG	1 cut(s)	698
BstNSI	RCATGY	2 cut(s)	267, 295
BstSCI	CCNGG	1 cut(s)	696
BstSFI	CTRYAG	1 cut(s)	651
BstUI	CGCG	1 cut(s)	126
BstV1I	GCAGC	5 cut(s)	133, 550, 646, 665, 668
BstX2I	RGATCY	1 cut(s)	601
BstYI	RGATCY	1 cut(s)	601
Bsu36I	CCTNAGG	2 cut(s)	161, 772
BsuRI	GGCC	4 cut(s)	151, 451, 617, 770
BtsCI	GGATG	3 cut(s)	482, 706, 899
Cac8I	GCNNGC	2 cut(s)	149, 293
CaiI	CAGNNNCTG	2 cut(s)	659, 662
CfoI	GCGC	2 cut(s)	126, 670
Cfr13I	GGNCC	2 cut(s)	97, 449
CseI	GACGC	2 cut(s)	65, 589
CviAII	CATG	4 cut(s)	264, 292, 322, 543
DdeI	CTNAG	6 cut(s)	60, 161, 396, 591, 772, 807
DpnI	GATC	2 cut(s)	287, 603
DpnII	GATC	2 cut(s)	285, 601
Eco130I	CCWWGG	1 cut(s)	612
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	1 cut(s)	97
Eco57I	CTGAAG	1 cut(s)	480
Eco81I	CCTNAGG	2 cut(s)	161, 772
EcoRI	GAATTC	1 cut(s)	312
EcoRII	CCWGG	1 cut(s)	696
EcoT14I	CCWWGG	1 cut(s)	612
ErhI	CCWWGG	1 cut(s)	612
Esp3I	CGTCTC	1 cut(s)	572
FaeI	CATG	4 cut(s)	267, 295, 325, 546
FaiI	YATR	9 cut(s)	265, 293, 323, 405, 474, 544, 822, 950, 952
FaqI	GGGAC	1 cut(s)	263
FatI	CATG	4 cut(s)	263, 291, 321, 542
FbaI	TGATCA	1 cut(s)	285
Fnu4HI	GCNGC	7 cut(s)	122, 142, 145, 539, 654, 657, 660
FokI	GGATG	3 cut(s)	489, 713, 886
Fsp4HI	GCNGC	7 cut(s)	122, 142, 145, 539, 654, 657, 660
FspBI	CTAG	1 cut(s)	528
GlaI	GCGC	2 cut(s)	125, 669
GluI	GCNGC	7 cut(s)	122, 142, 145, 539, 654, 657, 660
GsuI	CTGGAG	1 cut(s)	858
HaeIII	GGCC	4 cut(s)	151, 451, 617, 770
HapII	CCGG	1 cut(s)	644
HgaI	GACGC	2 cut(s)	65, 589
HhaI	GCGC	2 cut(s)	126, 670
Hin1II	CATG	4 cut(s)	267, 295, 325, 546
Hin6I	GCGC	2 cut(s)	124, 668
HinP1I	GCGC	2 cut(s)	124, 668
HincII	GTYRAC	1 cut(s)	626
HindII	GTYRAC	1 cut(s)	626
HindIII	AAGCTT	1 cut(s)	593
HinfI	GANTC	1 cut(s)	68
HpaII	CCGG	1 cut(s)	644
HphI	GGTGA	1 cut(s)	63
Hpy166II	GTNNAC	1 cut(s)	626
Hpy188I	TCNGA	3 cut(s)	311, 351, 601
Hpy188III	TCNNGA	6 cut(s)	135, 280, 395, 774, 857, 875
Hpy8I	GTNNAC	1 cut(s)	626
HpyCH4III	ACNGT	5 cut(s)	239, 355, 361, 556, 562
HpyCH4IV	ACGT	1 cut(s)	459
HpyCH4V	TGCA	9 cut(s)	121, 295, 365, 480, 491, 546, 653, 733, 756
HpyF10VI	GCNNNNNNNGC	5 cut(s)	118, 497, 659, 665, 762
HpyF3I	CTNAG	6 cut(s)	60, 161, 396, 591, 772, 807
HpySE526I	ACGT	1 cut(s)	459
Hsp92II	CATG	4 cut(s)	267, 295, 325, 546
HspAI	GCGC	2 cut(s)	124, 668
Ksp22I	TGATCA	1 cut(s)	285
Kzo9I	GATC	2 cut(s)	285, 601
LmnI	GCTCC	1 cut(s)	218
Lsp1109I	GCAGC	5 cut(s)	133, 550, 646, 665, 668
LweI	GCATC	4 cut(s)	452, 467, 655, 691
MaeI	CTAG	1 cut(s)	528
MaeII	ACGT	1 cut(s)	459
MaeIII	GTNAC	4 cut(s)	69, 259, 355, 556
MalI	GATC	2 cut(s)	287, 603
MboI	GATC	2 cut(s)	285, 601
MboII	GAAGA	1 cut(s)	4
MfeI	CAATTG	1 cut(s)	760
MflI	RGATCY	1 cut(s)	601
MlyI	GAGTC	1 cut(s)	77
MmeI	TCCRAC	1 cut(s)	374
MnlI	CCTC	8 cut(s)	131, 142, 250, 428, 462, 628, 770, 781
MseI	TTAA	4 cut(s)	30, 318, 519, 979
MspA1I	CMGCKG	1 cut(s)	659
MspI	CCGG	1 cut(s)	644
MspR9I	CCNGG	1 cut(s)	698
MunI	CAATTG	1 cut(s)	760
MvaI	CCWGG	1 cut(s)	698
MvnI	CGCG	1 cut(s)	126
MwoI	GCNNNNNNNGC	5 cut(s)	118, 497, 659, 665, 762
NdeII	GATC	2 cut(s)	285, 601
NlaIII	CATG	4 cut(s)	267, 295, 325, 546
NlaIV	GGNNCC	4 cut(s)	98, 130, 603, 642
NmuCI	GTSAC	4 cut(s)	69, 259, 355, 556
NspI	RCATGY	2 cut(s)	267, 295
PaeI	GCATGC	1 cut(s)	295
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PflFI	GACNNNGTC	2 cut(s)	67, 275
PfoI	TCCNGGA	1 cut(s)	696
PkrI	GCNGC	7 cut(s)	123, 143, 146, 540, 655, 658, 661
PleI	GAGTC	1 cut(s)	76
PpsI	GAGTC	1 cut(s)	76
Psp6I	CCWGG	1 cut(s)	696
PspGI	CCWGG	1 cut(s)	696
PspN4I	GGNNCC	4 cut(s)	98, 130, 603, 642
PspPI	GGNCC	2 cut(s)	97, 449
PstI	CTGCAG	1 cut(s)	655
PstNI	CAGNNNCTG	2 cut(s)	659, 662
PsuI	RGATCY	1 cut(s)	601
PsyI	GACNNNGTC	2 cut(s)	67, 275
PvuII	CAGCTG	1 cut(s)	659
SaqAI	TTAA	4 cut(s)	30, 318, 519, 979
SatI	GCNGC	7 cut(s)	122, 142, 145, 539, 654, 657, 660
Sau3AI	GATC	2 cut(s)	285, 601
Sau96I	GGNCC	2 cut(s)	97, 449
SchI	GAGTC	1 cut(s)	77
ScrFI	CCNGG	1 cut(s)	698
SfaNI	GCATC	4 cut(s)	452, 467, 655, 691
SfcI	CTRYAG	1 cut(s)	651
SinI	GGWCC	1 cut(s)	97
SmlI	CTYRAG	1 cut(s)	133
SmoI	CTYRAG	1 cut(s)	133
SphI	GCATGC	1 cut(s)	295
SsiI	CCGC	3 cut(s)	126, 141, 144
SspMI	CTAG	1 cut(s)	528
StyD4I	CCNGG	1 cut(s)	696
StyI	CCWWGG	1 cut(s)	612
TaaI	ACNGT	5 cut(s)	239, 355, 361, 556, 562
TaiI	ACGT	1 cut(s)	462
TaqI	TCGA	3 cut(s)	15, 255, 485
TaqII	GACCGA	1 cut(s)	80
TauI	GCSGC	2 cut(s)	144, 147
Tru1I	TTAA	4 cut(s)	30, 318, 519, 979
Tru9I	TTAA	4 cut(s)	30, 318, 519, 979
TseFI	GTSAC	4 cut(s)	69, 259, 355, 556
TseI	GCWGC	5 cut(s)	121, 538, 653, 656, 659
Tsp45I	GTSAC	4 cut(s)	69, 259, 355, 556
TspDTI	ATGAA	6 cut(s)	338, 802, 822, 837, 888, 897
TspGWI	ACGGA	1 cut(s)	120
Tth111I	GACNNNGTC	2 cut(s)	67, 275
VpaK11BI	GGWCC	1 cut(s)	97
XapI	RAATTY	5 cut(s)	312, 829, 861, 879, 895
XceI	RCATGY	2 cut(s)	267, 295
XspI	CTAG	1 cut(s)	528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.