Rmu_sc0000129.1_g000018

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000129.1
OG0000114
Physical Location & Seq
Forward (+)
73629 .. 79955
6327 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000129.1_g000018.1.cds

Sequence Viewer

Length: 4305 bp
atggcgacccaaggaacccaacaagcctttggttatcgaagacgtccaggtggcttcgccgcaggccggagagctgatgtgacagatggaagtaatattgggacttgtttggcatggtttggcgaattactggatctagtagagaataaaacttatggtgcaaatgatatttatattcgtgttcatggctccgaactagtgctcttatctcatatcctgccattctgtacctgccaagacaaaattgtaccaggacagcgtatcagtggtaacttgactttggtttcttcccttgggaccttttcattaggcttcttcaatcctgaaaattctactaagtacttccttggtatacgattcaacaaatccccaactactgcattagtatgggtagctaatagagaatctccacttgattctccgggtttctttatgctcagcagtgatggaaatcttgtggtgttggatcagactagaaaacttgtctggtcaactaaagcatctgtatctgcttctgcaatgaatcacacaactggattactagaggattccggaaaccttgttctgagctttgaagaagtcactttgtggcggagcttcgatcatccctctgatactatgttgcctggcattaagattagcttgaacaaaacgactggccaacaaaggcgccttacatcctgggcagcgcttgatgatccacaacccgggaagttcaccttcggcatagatcctaaagtaccagttcagtcctttgtctggaaggaaactactccgtatgctagaagttctgtgtacattggccagtatacaagaacacagtttcaaaatccaggtggaactgcgtttttctattcatacaactttgatgttgatgaggtttatcttgcttgcagtgtctcggatagctcagtaaaatggagggcctggttggatcccaaggggcaacttaaacagcagttgtggcagaattctagtaaaacgtggttggaagcagggaattcatggcccgttgatatctgtgatttttatgctcattgcggtcccaatagtgcctgtcgtagaggtgaacccctgtcatcaccatgcaagtgtttgactggttttacagccaagtttccgaaccaatcggcggtaggggattggtccagtggctgcattagggaaaaggtgttgacatgtggtaacggcatacaaggttacttttcaaagcttgaaaaggtgaaactgccggatcattttgttctcttagagaataggagtatgagcgagtgtgactctgaatgccagcagaactgttcttgtacagcttatgcttatgtaaatgggacagatggaagtaatattgggacttgtttggcatggtttggcgaattactggatctagtagagaataaaacttatggtgcaaatgatatttatattcgtgttcatggctccgaactaggcaaaaagggtctttccgttaattccttgaagcggacccttgtaattgcaatagtctctgcagcagcagttggattgcttacaataacttttggctatttcttttggaagaaaaaattggaaaagaaaggtaagcagaatataagtaatgttagtgcaggaggtgggaagaatgatacagaattaccactcttcagtttaaggagtatgctagctgctacaaacaacttctctgaagcgaataagcttggagaggggggattcggccctgtttataagggaattttgccaggaaatcaagaagtggccataaagaggctatcaaagaagtctgggcaaggacatcatgagttcaagaatgaattgaaacttatagccaaactccagcataccaatcttgtaaggctattgggttgttgcatggaaggagatgaaatgatattgatctatgaatacatgtctaatcgaagtttggacaaatttttgtttggtatgtatgcttgtatcagtggtaacttgactttggtttcttcccttgggaccttttcattaggcttcttcaatcctgaaaattctactaagtacttccttggtatacgattcaacaaatccccaactactgcattagtatgggtagctaatagagaatctccacttgattctccgggtttctttatgctcagcagtgatggaaatcttgtggtgttggatcagactagaaaacttgtctggtcaactaaagcatctgtatctgcttctgcaatgaatcacacaactggattactagaggattccggaaaccttgttctgagctttgaagaagtcactttgtggcggagcttcgatcatccctctgatactatgttgcctggcattaagattagcttgaacaaaacgactggccaacaaaggcgccttacatcctgggcagcgcttgatgatccacaacccgggaagttcaccttcggcatagatcctaaagtaccagttcagtcctttgtctggaaggaaactactccgtatgctagaagttctgtgtacattggccagtatacaagaacacagtttcaaaatccaggtggaactgcgtttttctattcatacaactttgatgttgatgaggtttatcttgcttgcagtgtctcggatagctcagtaaaatggagggcctggttggatcccaaggggcaacttaaacagcagttgtggcagaattctagtaaaacgtggttggaagcagggaattcatggcccgttgatatctgtgatttttatgctcattgcggtcccaatagtgcctgtcgtagaggtgaacccctgtcatcaccatgcaagtgtttgactggttttacagccaagtttccgaaccaatcggcggtaggggattggtccagtggctgcattagggaaaaggtgttgacatgtggtaacggcatacaaggttacttttcaaagcttgaaaaggtgaaactgccggatcattttgttctcttagagaataggagtatgagcgagtgtgactctgaatgccagcagaactgttcttgtacagcttatgcttatgtaaatgggacagatggaagtaatattgggacttgtttggcatggtttggcgaattactggatctagtagagaataaaacttatggtgcaaatgatatttatattcgtgttcatggctccgaactaggcaaaaagggtctttccgttaattccttgaagcggacccttgtaattgcaatagtctctgcagcagcagttggattgcttacaataacttttggctatttcttttggaagaaaaaattggaaaagaaaggtaagcagaatataagtaatgttagtgcaggaggtgggaagaatgatacagaattaccactcttcagtttaaggagtatgctagctgctacaaacaacttctctgaagcgaataagcttggagaggggggattcggccctgtttataagggaattttgccaggaaatcaagaagtggccataaagaggctatcaaagaagtctgggcaaggacatcatgagttcaagaatgaattgaaacttatagccaaactccagcataccaatcttgtaaggctattgggttgttgcatggaaggagatgaaatgatattgatctatgaatacatgtctaatcgaagtttggacaaatttttgtttgatgcctttgaaaagacaaagttagattgggatacacgctttcgaattatacaaggtattgctcaaggagtactatatatccacaagtactctagattgaaaataatccacagagatctaaaagcaagcaatgttctgttggacggaacaatgaaccccaaagtgtctgactttggaatggcgagaatttttgatataaatcaaattgaagcaaatactaacaaggttgttggaacatacggctatatgtctcctgaatatgcactctttggtcatttctccgagaaattggatgtatttagtttcggagtattgttgttagagattgtaagcggaaagaagaatgcttctttttatagctttgaaaattcactaacacttgctcaatgggtatgggaattatggaaagaaggtagaggagtggaggtaattgacgcatcagtaagggaaacatgccggattcatgaagctttgaggtgtatccatgtcgggcttttgtgcgttcaagaagctccagttgatcgaccaacaatgtcatccgtcattcatatgctcgaggttgacgaagctacatcacttccaccctccaaagaaccagctttttcaacatgtagaaattcaagtcctgttaccattttttctgacaatgtaatcactattactttgccagaacctcgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

1434

Amino Acids

158.99

Weight (kDa)

8.36

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1722, 3411
AatII GACGTC 1 cut(s) 46
Acc36I ACCTGC 1 cut(s) 239
AccB1I GGYRCC 2 cut(s) 669, 2358
AccI GTMKAC 4 cut(s) 352, 809, 2041, 2498
AccIII TCCGGA 2 cut(s) 551, 2240
AcoI YGGCCR 6 cut(s) 658, 802, 1752, 2347, 2491, 3441
AcuI CTGAAG 4 cut(s) 1624, 1701, 3313, 3390
AcyI GRCGYC 3 cut(s) 43, 670, 2359
AdeI CACNNNGTG 2 cut(s) 588, 2277
AfeI AGCGCT 2 cut(s) 690, 2379
AflIII ACRYGT 5 cut(s) 1178, 1902, 2867, 3591, 4232
AhlI ACTAGT 1 cut(s) 196
AjuI GAANNNNNNNTTGG 4 cut(s) 1547, 1579, 3236, 3268
AloI GAACNNNNNNTCC 4 cut(s) 546, 578, 2235, 2267
Alw21I GWGCWC 1 cut(s) 204
Alw26I GTCTC 5 cut(s) 904, 1507, 2593, 3196, 3879
AlwNI CAGNNNCTG 2 cut(s) 1155, 2844
Ama87I CYCGRG 3 cut(s) 707, 2396, 4178
Aor13HI TCCGGA 2 cut(s) 551, 2240
Aor51HI AGCGCT 2 cut(s) 690, 2379
AspLEI GCGC 4 cut(s) 672, 691, 2361, 2380
AsuC2I CCSGG 6 cut(s) 423, 708, 709, 2112, 2397, 2398
AsuHPI GGTGA 8 cut(s) 709, 1074, 1079, 1234, 2398, 2763, 2768, 2923
AsuII TTCGAA 1 cut(s) 3667
AsuNHI GCTAGC 2 cut(s) 1657, 3346
AvaI CYCGRG 3 cut(s) 707, 2396, 4178
AvaII GGWCC 8 cut(s) 297, 1043, 1146, 1482, 1986, 2732, 2835, 3171
BalI TGGCCA 6 cut(s) 660, 804, 1754, 2349, 2493, 3443
BamHI GGATCC 2 cut(s) 934, 2623
BanI GGYRCC 2 cut(s) 669, 2358
BbsI GAAGAC 1 cut(s) 46
Bbv12I GWGCWC 1 cut(s) 204
BccI CCATC 5 cut(s) 80, 440, 1328, 2129, 3017
BceAI ACGGC 3 cut(s) 1204, 2893, 3880
BciVI GTATCC 2 cut(s) 3649, 4115
BcnI CCSGG 6 cut(s) 423, 708, 709, 2112, 2397, 2398
BcoDI GTCTC 5 cut(s) 904, 1507, 2593, 3196, 3879
BcuI ACTAGT 1 cut(s) 196
BfmI CTRYAG 2 cut(s) 1506, 3195
BfoI RGCGCY 4 cut(s) 673, 692, 2362, 2381
BfuAI ACCTGC 1 cut(s) 239
BfuI GTATCC 2 cut(s) 3649, 4115
BglII AGATCT 1 cut(s) 3739
BlpI GCTNAGC 2 cut(s) 437, 2126
BmcAI AGTACT 4 cut(s) 341, 2030, 3696, 3713
Bme18I GGWCC 8 cut(s) 297, 1043, 1146, 1482, 1986, 2732, 2835, 3171
BmeT110I CYCGRG 3 cut(s) 707, 2396, 4178
BmsI GCATC 4 cut(s) 509, 2198, 3616, 4070
BmtI GCTAGC 2 cut(s) 1661, 3350
BpiI GAAGAC 1 cut(s) 46
BplI GAGNNNNNCTC 4 cut(s) 1262, 1294, 2951, 2983
BpmI CTGGAG 3 cut(s) 1814, 3503, 4122
Bpu1102I GCTNAGC 2 cut(s) 437, 2126
Bpu14I TTCGAA 1 cut(s) 3667
BpuEI CTTGAG 1 cut(s) 3672
BpuMI CCSGG 6 cut(s) 423, 708, 709, 2112, 2397, 2398
BsaBI GATNNNNATC 5 cut(s) 450, 1889, 2139, 3578, 3822
BsaHI GRCGYC 3 cut(s) 43, 670, 2359
BsaWI WCCGGW 2 cut(s) 551, 2240
BsaXI ACNNNNNCTCC 2 cut(s) 4035, 4065
Bse3DI GCAATG 5 cut(s) 525, 1036, 2214, 2725, 3760
Bse8I GATNNNNATC 5 cut(s) 450, 1889, 2139, 3578, 3822
BseAI TCCGGA 2 cut(s) 551, 2240
BseGI GGATG 6 cut(s) 604, 677, 2293, 2366, 3922, 4160
BseJI GATNNNNATC 5 cut(s) 450, 1889, 2139, 3578, 3822
BseMI GCAATG 5 cut(s) 525, 1036, 2214, 2725, 3760
BseMII CTCAG 6 cut(s) 451, 557, 924, 2140, 2246, 2613
BseRI GAGGAG 1 cut(s) 4056
BsgI GTGCAG 2 cut(s) 1623, 3312
BshNI GGYRCC 2 cut(s) 669, 2358
BsiHKAI GWGCWC 1 cut(s) 204
BsiHKCI CYCGRG 3 cut(s) 707, 2396, 4178
BslFI GGGAC 9 cut(s) 115, 310, 1029, 1342, 1363, 1999, 2718, 3031, 3052
BsmAI GTCTC 5 cut(s) 904, 1507, 2593, 3196, 3879
BsmFI GGGAC 9 cut(s) 115, 310, 1029, 1342, 1363, 1999, 2718, 3031, 3052
BsmI GAATGC 3 cut(s) 1289, 2978, 3973
BsoBI CYCGRG 3 cut(s) 707, 2396, 4178
Bsp119I TTCGAA 1 cut(s) 3667
Bsp1286I GDGCHC 1 cut(s) 204
Bsp13I TCCGGA 2 cut(s) 551, 2240
Bsp1407I TGTACA 4 cut(s) 795, 1304, 2484, 2993
Bsp1720I GCTNAGC 2 cut(s) 437, 2126
BspCNI CTCAG 6 cut(s) 450, 558, 923, 2139, 2247, 2612
BspEI TCCGGA 2 cut(s) 551, 2240
BspHI TCATGA 3 cut(s) 1792, 3481, 4087
BspMAI CTGCAG 2 cut(s) 1510, 3199
BspMI ACCTGC 1 cut(s) 239
BspOI GCTAGC 2 cut(s) 1661, 3350
BspT104I TTCGAA 1 cut(s) 3667
BspT107I GGYRCC 2 cut(s) 669, 2358
BsrDI GCAATG 5 cut(s) 525, 1036, 2214, 2725, 3760
BsrGI TGTACA 4 cut(s) 795, 1304, 2484, 2993
BssNAI GTATAC 4 cut(s) 353, 810, 2042, 2499
BssNI GRCGYC 3 cut(s) 43, 670, 2359
BssT1I CCWWGG 7 cut(s) 10, 292, 346, 939, 1981, 2035, 2628
Bst1107I GTATAC 4 cut(s) 353, 810, 2042, 2499
Bst4CI ACNGT 4 cut(s) 822, 1298, 2511, 2987
Bst6I CTCTTC 2 cut(s) 1643, 3332
BstACI GRCGYC 3 cut(s) 43, 670, 2359
BstAUI TGTACA 4 cut(s) 795, 1304, 2484, 2993
BstBI TTCGAA 1 cut(s) 3667
BstC8I GCNNGC 8 cut(s) 64, 892, 1289, 1659, 2581, 2978, 3348, 3751
BstF5I GGATG 6 cut(s) 604, 677, 2293, 2366, 3922, 4160
BstH2I RGCGCY 4 cut(s) 673, 692, 2362, 2381
BstHHI GCGC 4 cut(s) 672, 691, 2361, 2380
BstMAI GTCTC 5 cut(s) 904, 1507, 2593, 3196, 3879
BstMWI GCNNNNNNNGC 2 cut(s) 964, 2653
BstNSI RCATGY 6 cut(s) 1182, 1906, 2871, 3595, 4080, 4236
BstSFI CTRYAG 2 cut(s) 1506, 3195
BstV2I GAAGAC 1 cut(s) 46
BstX2I RGATCY 8 cut(s) 133, 730, 934, 1381, 2419, 2623, 3070, 3739
BstYI RGATCY 8 cut(s) 133, 730, 934, 1381, 2419, 2623, 3070, 3739
BstZ17I GTATAC 4 cut(s) 353, 810, 2042, 2499
BsuI GTATCC 2 cut(s) 3649, 4115
BtsCI GGATG 6 cut(s) 604, 677, 2293, 2366, 3922, 4160
BtsI GCAGTG 4 cut(s) 448, 901, 2137, 2590
BtsIMutI CAGTG 8 cut(s) 271, 448, 901, 1156, 1960, 2137, 2590, 2845
BveI ACCTGC 1 cut(s) 239
Cac8I GCNNGC 8 cut(s) 64, 892, 1289, 1659, 2581, 2978, 3348, 3751
CaiI CAGNNNCTG 2 cut(s) 1155, 2844
CciI TCATGA 3 cut(s) 1792, 3481, 4087
CfoI GCGC 4 cut(s) 672, 691, 2361, 2380
Cfr9I CCCGGG 2 cut(s) 707, 2396
CseI GACGC 1 cut(s) 4067
DinI GGCGCC 2 cut(s) 671, 2360
DraIII CACNNNGTG 2 cut(s) 588, 2277
EaeI YGGCCR 6 cut(s) 658, 802, 1752, 2347, 2491, 3441
Eam1104I CTCTTC 2 cut(s) 1643, 3332
EarI CTCTTC 2 cut(s) 1643, 3332
EciI GGCGGA 2 cut(s) 607, 2296
Eco130I CCWWGG 7 cut(s) 10, 292, 346, 939, 1981, 2035, 2628
Eco32I GATATC 2 cut(s) 1018, 2707
Eco47I GGWCC 8 cut(s) 297, 1043, 1146, 1482, 1986, 2732, 2835, 3171
Eco47III AGCGCT 2 cut(s) 690, 2379
Eco57I CTGAAG 4 cut(s) 1624, 1701, 3313, 3390
Eco88I CYCGRG 3 cut(s) 707, 2396, 4178
EcoO109I RGGNCCY 4 cut(s) 297, 924, 1986, 2613
EcoRI GAATTC 4 cut(s) 970, 1000, 2659, 2689
EcoRV GATATC 2 cut(s) 1018, 2707
EcoT14I CCWWGG 7 cut(s) 10, 292, 346, 939, 1981, 2035, 2628
EgeI GGCGCC 2 cut(s) 671, 2360
EheI GGCGCC 2 cut(s) 671, 2360
ErhI CCWWGG 7 cut(s) 10, 292, 346, 939, 1981, 2035, 2628
FalI AAGNNNNNCTT 8 cut(s) 626, 658, 704, 736, 2315, 2347, 2393, 2425
FaqI GGGAC 9 cut(s) 115, 310, 1029, 1342, 1363, 1999, 2718, 3031, 3052
FauNDI CATATG 1 cut(s) 4173
FblI GTMKAC 4 cut(s) 352, 809, 2041, 2498
FokI GGATG 6 cut(s) 591, 664, 2280, 2353, 3929, 4147
GlaI GCGC 4 cut(s) 671, 690, 2360, 2379
GsuI CTGGAG 3 cut(s) 1814, 3503, 4122
HaeII RGCGCY 4 cut(s) 673, 692, 2362, 2381
HgaI GACGC 1 cut(s) 4067
HhaI GCGC 4 cut(s) 672, 691, 2361, 2380
Hin1I GRCGYC 3 cut(s) 43, 670, 2359
Hin6I GCGC 4 cut(s) 670, 689, 2359, 2378
HinP1I GCGC 4 cut(s) 670, 689, 2359, 2378
HincII GTYRAC 5 cut(s) 492, 1176, 2181, 2865, 4186
HindII GTYRAC 5 cut(s) 492, 1176, 2181, 2865, 4186
HindIII AAGCTT 5 cut(s) 1211, 1691, 2900, 3380, 4092
HphI GGTGA 8 cut(s) 709, 1074, 1079, 1234, 2398, 2763, 2768, 2923
HpyAV CCTTC 7 cut(s) 730, 757, 1865, 2419, 2446, 3554, 4028
HpyCH4III ACNGT 4 cut(s) 822, 1298, 2511, 2987
HpyCH4IV ACGT 3 cut(s) 43, 983, 2672
HpyF10VI GCNNNNNNNGC 2 cut(s) 964, 2653
HpySE526I ACGT 3 cut(s) 43, 983, 2672
Hsp92I GRCGYC 3 cut(s) 43, 670, 2359
HspAI GCGC 4 cut(s) 670, 689, 2359, 2378
KasI GGCGCC 2 cut(s) 669, 2358
Kpn2I TCCGGA 2 cut(s) 551, 2240
LmnI GCTCC 6 cut(s) 194, 594, 1442, 2283, 3131, 4141
LweI GCATC 4 cut(s) 509, 2198, 3616, 4070
MaeII ACGT 3 cut(s) 43, 983, 2672
MflI RGATCY 8 cut(s) 133, 730, 934, 1381, 2419, 2623, 3070, 3739
MhlI GDGCHC 1 cut(s) 204
MlsI TGGCCA 6 cut(s) 660, 804, 1754, 2349, 2493, 3443
MluNI TGGCCA 6 cut(s) 660, 804, 1754, 2349, 2493, 3443
Mly113I GGCGCC 2 cut(s) 670, 2359
MlyI GAGTC 2 cut(s) 1271, 2960
Mox20I TGGCCA 6 cut(s) 660, 804, 1754, 2349, 2493, 3443
MroI TCCGGA 2 cut(s) 551, 2240
MscI TGGCCA 6 cut(s) 660, 804, 1754, 2349, 2493, 3443
MseI TTAA 8 cut(s) 633, 951, 1467, 1646, 2322, 2640, 3156, 3335
MslI CAYNNNNRTG 7 cut(s) 385, 1084, 1090, 2074, 2773, 2779, 4172
Msp20I TGGCCA 6 cut(s) 660, 804, 1754, 2349, 2493, 3443
Mva1269I GAATGC 3 cut(s) 1289, 2978, 3973
MwoI GCNNNNNNNGC 2 cut(s) 964, 2653
NarI GGCGCC 2 cut(s) 670, 2359
NciI CCSGG 6 cut(s) 423, 708, 709, 2112, 2397, 2398
NdeI CATATG 1 cut(s) 4173
NheI GCTAGC 2 cut(s) 1657, 3346
NmuCI GTSAC 5 cut(s) 79, 580, 1274, 2269, 2963
NspI RCATGY 6 cut(s) 1182, 1906, 2871, 3595, 4080, 4236
NspV TTCGAA 1 cut(s) 3667
PaeR7I CTCGAG 1 cut(s) 4178
PagI TCATGA 3 cut(s) 1792, 3481, 4087
PciI ACATGT 5 cut(s) 1178, 1902, 2867, 3591, 4232
PcsI WCGNNNNNNNCGW 1 cut(s) 4185
PctI GAATGC 3 cut(s) 1289, 2978, 3973
PleI GAGTC 2 cut(s) 1271, 2960
PluTI GGCGCC 2 cut(s) 673, 2362
PpsI GAGTC 2 cut(s) 1271, 2960
PpuMI RGGWCCY 2 cut(s) 297, 1986
PscI ACATGT 5 cut(s) 1178, 1902, 2867, 3591, 4232
PsiI TTATAA 2 cut(s) 1722, 3411
Psp5II RGGWCCY 2 cut(s) 297, 1986
PspPPI RGGWCCY 2 cut(s) 297, 1986
PspXI VCTCGAGB 1 cut(s) 4178
PstI CTGCAG 2 cut(s) 1510, 3199
PstNI CAGNNNCTG 2 cut(s) 1155, 2844
PsuI RGATCY 8 cut(s) 133, 730, 934, 1381, 2419, 2623, 3070, 3739
RseI CAYNNNNRTG 7 cut(s) 385, 1084, 1090, 2074, 2773, 2779, 4172
SaqAI TTAA 8 cut(s) 633, 951, 1467, 1646, 2322, 2640, 3156, 3335
ScaI AGTACT 4 cut(s) 341, 2030, 3696, 3713
SchI GAGTC 2 cut(s) 1271, 2960
SduI GDGCHC 1 cut(s) 204
SfaNI GCATC 4 cut(s) 509, 2198, 3616, 4070
SfcI CTRYAG 2 cut(s) 1506, 3195
SfoI GGCGCC 2 cut(s) 671, 2360
Sfr274I CTCGAG 1 cut(s) 4178
SfuI TTCGAA 1 cut(s) 3667
SinI GGWCC 8 cut(s) 297, 1043, 1146, 1482, 1986, 2732, 2835, 3171
SlaI CTCGAG 1 cut(s) 4178
SmaI CCCGGG 2 cut(s) 709, 2398
SmiMI CAYNNNNRTG 7 cut(s) 385, 1084, 1090, 2074, 2773, 2779, 4172
SmlI CTYRAG 2 cut(s) 3687, 4178
SmoI CTYRAG 2 cut(s) 3687, 4178
SpeI ACTAGT 1 cut(s) 196
SspDI GGCGCC 2 cut(s) 669, 2358
SspI AATATT 3 cut(s) 97, 1345, 3034
StyI CCWWGG 7 cut(s) 10, 292, 346, 939, 1981, 2035, 2628
TaaI ACNGT 4 cut(s) 822, 1298, 2511, 2987
TaiI ACGT 3 cut(s) 46, 986, 2675
TaqI TCGA 9 cut(s) 37, 600, 1912, 2289, 3601, 3667, 4147, 4179, 4300
TatI WGTACW 8 cut(s) 339, 795, 1304, 2028, 2484, 2993, 3694, 3711
TauI GCSGC 1 cut(s) 62
Tru1I TTAA 8 cut(s) 633, 951, 1467, 1646, 2322, 2640, 3156, 3335
Tru9I TTAA 8 cut(s) 633, 951, 1467, 1646, 2322, 2640, 3156, 3335
TscAI CASTG 8 cut(s) 271, 448, 901, 1156, 1960, 2137, 2590, 2845
TseFI GTSAC 5 cut(s) 79, 580, 1274, 2269, 2963
Tsp45I GTSAC 5 cut(s) 79, 580, 1274, 2269, 2963
TspGWI ACGGA 6 cut(s) 765, 1453, 2454, 3142, 3783, 4153
TspMI CCCGGG 2 cut(s) 707, 2396
TspRI CASTG 8 cut(s) 271, 448, 901, 1156, 1960, 2137, 2590, 2845
VpaK11BI GGWCC 8 cut(s) 297, 1043, 1146, 1482, 1986, 2732, 2835, 3171
XbaI TCTAGA 1 cut(s) 3716
XceI RCATGY 6 cut(s) 1182, 1906, 2871, 3595, 4080, 4236
XcmI CCANNNNNNNNNTGG 1 cut(s) 26
XhoI CTCGAG 1 cut(s) 4178
XmaI CCCGGG 2 cut(s) 707, 2396
XmiI GTMKAC 4 cut(s) 352, 809, 2041, 2498
ZraI GACGTC 1 cut(s) 44
ZrmI AGTACT 4 cut(s) 341, 2030, 3696, 3713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.