Rh1BG062900

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000114
Physical Location & Seq
Reverse (-)
9319632 .. 9322972
3341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG062900.1

Sequence Viewer

Length: 1839 bp
ATGAACCTTTTTTTCCTTCCTCTTCTTCCTCTGTCTCACTGTTTCCGAATGGGGTGGCTCTTGTGTTACGTTGTAGCAGTGCTCTTATTTCATATCCTGCCATTCTGTACCTGCCAAGACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATCCCCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTTCGGGTTTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATGACGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCGGAGCTTCGATCATCCCTCTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGGCGCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGATCCTAAAGTACCAGTTCAGGCCTTTGTCTGGAAGGAAACTACTCCGTATTTTAGAAGTTCTGTGTACATTGGCCAGGATACAAGAACACAGTTTCAAAATCCAGGTGGAACTGCGTTTTTCCTTTCATACAACTTTGATGTTGATGAGGCTTATATTGCTTGCACTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCCACGGGGAAACTTAAACCGCAGTTGTGGCAGAATTCTAATAAAACGTGGTTGGAAGTAGGGGATTCACGGCCCGATGATATCTGTGATTTTTATGCTCATTGCGGTCCCAACAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTATAGCCAAGTTTCCGAACCAATCAGCGGTAGGGGATTGGTCCAGTGGCTGCATTAGGAAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACTTGTTTGGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTACGGGTGCAAATGATATTTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCAGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAGGGTAAGCAGAATATAAGTAATGTTAGTGCAGGAGGTGGGAAGAATGATACAGAATTACCACTCTTCAGTTTAAGGAGTATGCTAGCTGCTACAAACAACTTCTCTGAAGCGAATAAGCTTGGAGAGGGGGGGTTCGGCCCTGTTTATAAGGGAATTTTGCCAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGTTGTATGGAAGGAGATGAAATGATATTGATCTATGAATACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGGTATGTATGCTTATGACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

612

Amino Acids

67.9

Weight (kDa)

8.28

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 88 - 188 9.3e-31 D-mannose binding lectin
S_locus_glycop PF00954 249 - 332 1.4e-14 S-locus glycoprotein domain
PAN_2 PF08276 361 - 422 1.5e-14 PAN-like domain
Pkinase PF00069 520 - 604 2.6e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 522 - 604 5.5e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1602
Acc36I ACCTGC 1 cut(s) 119
AccB1I GGYRCC 1 cut(s) 549
AccI GTMKAC 1 cut(s) 232
AciI CCGC 5 cut(s) 472, 836, 921, 1013, 1360
AclWI GGATC 7 cut(s) 354, 572, 605, 809, 822, 1122, 1269
AcoI YGGCCR 3 cut(s) 538, 682, 1632
AcsI RAATTY 4 cut(s) 208, 850, 1608, 1805
AcuI CTGAAG 2 cut(s) 1504, 1581
AcyI GRCGYC 1 cut(s) 550
AdeI CACNNNGTG 1 cut(s) 468
AfaI GTAC 5 cut(s) 109, 129, 621, 677, 1186
AfeI AGCGCT 1 cut(s) 570
AfiI CCNNNNNNNGG 6 cut(s) 160, 587, 639, 1012, 1359, 1641
AflIII ACRYGT 2 cut(s) 1058, 1782
AjnI CCWGG 5 cut(s) 130, 505, 560, 684, 712
AjuI GAANNNNNNNTTGG 2 cut(s) 1427, 1459
AloI GAACNNNNNNTCC 2 cut(s) 426, 458
AluBI AGCT 9 cut(s) 275, 450, 477, 522, 789, 1093, 1190, 1541, 1573
AluI AGCT 9 cut(s) 275, 450, 477, 522, 789, 1093, 1190, 1541, 1573
Alw21I GWGCWC 1 cut(s) 84
Alw26I GTCTC 3 cut(s) 39, 784, 1387
AlwI GGATC 7 cut(s) 354, 572, 605, 809, 822, 1122, 1269
AlwNI CAGNNNCTG 2 cut(s) 936, 1035
Aor51HI AGCGCT 1 cut(s) 570
AoxI GGCC 6 cut(s) 538, 630, 682, 887, 1591, 1632
ApeKI GCWGC 5 cut(s) 566, 1035, 1388, 1391, 1541
ApoI RAATTY 4 cut(s) 208, 850, 1608, 1805
AspLEI GCGC 2 cut(s) 552, 571
AspS9I GGNCC 6 cut(s) 177, 888, 923, 1026, 1362, 1592
AsuC2I CCSGG 1 cut(s) 588
AsuHPI GGTGA 4 cut(s) 589, 954, 959, 1114
AsuNHI GCTAGC 1 cut(s) 1537
AvaII GGWCC 4 cut(s) 177, 923, 1026, 1362
BalI TGGCCA 3 cut(s) 540, 684, 1634
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 1 cut(s) 549
Bbv12I GWGCWC 1 cut(s) 84
BbvI GCAGC 5 cut(s) 578, 1022, 1400, 1403, 1528
BccI CCATC 2 cut(s) 320, 1208
BceAI ACGGC 2 cut(s) 902, 1084
BciT130I CCWGG 5 cut(s) 132, 507, 562, 686, 714
BciVI GTATCC 1 cut(s) 682
BcnI CCSGG 1 cut(s) 588
BcoDI GTCTC 3 cut(s) 39, 784, 1387
BfaI CTAG 5 cut(s) 354, 422, 1265, 1325, 1538
BfmI CTRYAG 1 cut(s) 1386
BfoI RGCGCY 2 cut(s) 553, 572
BfuAI ACCTGC 1 cut(s) 119
BfuI GTATCC 1 cut(s) 682
BisI GCNGC 5 cut(s) 567, 1036, 1389, 1392, 1542
BlpI GCTNAGC 1 cut(s) 317
BlsI GCNGC 5 cut(s) 568, 1037, 1390, 1393, 1543
Bme1390I CCNGG 6 cut(s) 132, 507, 562, 588, 686, 714
Bme18I GGWCC 4 cut(s) 177, 923, 1026, 1362
BmgT120I GGNCC 6 cut(s) 177, 888, 923, 1026, 1362, 1592
BmiI GGNNCC 6 cut(s) 178, 551, 816, 925, 1318, 1364
BmrFI CCNGG 6 cut(s) 132, 507, 562, 588, 686, 714
BmsI GCATC 1 cut(s) 389
BmtI GCTAGC 1 cut(s) 1541
BplI GAGNNNNNCTC 2 cut(s) 1142, 1174
BpmI CTGGAG 1 cut(s) 1694
Bpu1102I GCTNAGC 1 cut(s) 317
BpuMI CCSGG 1 cut(s) 588
BsaBI GATNNNNATC 2 cut(s) 330, 1769
BsaHI GRCGYC 1 cut(s) 550
BsaJI CCNNGG 4 cut(s) 172, 226, 561, 819
Bsc4I CCNNNNNNNGG 6 cut(s) 160, 587, 639, 1012, 1359, 1641
Bse1I ACTGG 6 cut(s) 418, 541, 623, 985, 1029, 1263
Bse3DI GCAATG 2 cut(s) 405, 916
Bse8I GATNNNNATC 2 cut(s) 330, 1769
BseBI CCWGG 5 cut(s) 132, 507, 562, 686, 714
BseDI CCNNGG 4 cut(s) 172, 226, 561, 819
BseGI GGATG 4 cut(s) 380, 433, 484, 557
BseJI GATNNNNATC 2 cut(s) 330, 1769
BseLI CCNNNNNNNGG 6 cut(s) 160, 587, 639, 1012, 1359, 1641
BseMI GCAATG 2 cut(s) 405, 916
BseMII CTCAG 3 cut(s) 331, 437, 804
BseNI ACTGG 6 cut(s) 418, 541, 623, 985, 1029, 1263
BseXI GCAGC 5 cut(s) 578, 1022, 1400, 1403, 1528
BsgI GTGCAG 1 cut(s) 1503
BshFI GGCC 6 cut(s) 540, 632, 684, 889, 1593, 1634
BshNI GGYRCC 1 cut(s) 549
BsiHKAI GWGCWC 1 cut(s) 84
BsiSI CCGG 2 cut(s) 588, 1112
BslFI GGGAC 3 cut(s) 190, 909, 1243
BslI CCNNNNNNNGG 6 cut(s) 160, 587, 639, 1012, 1359, 1641
BsmAI GTCTC 3 cut(s) 39, 784, 1387
BsmFI GGGAC 3 cut(s) 190, 909, 1243
BsmI GAATGC 1 cut(s) 1169
BsnI GGCC 6 cut(s) 540, 632, 684, 889, 1593, 1634
Bsp1286I GDGCHC 1 cut(s) 84
Bsp1407I TGTACA 2 cut(s) 675, 1184
Bsp143I GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
Bsp1720I GCTNAGC 1 cut(s) 317
BspACI CCGC 5 cut(s) 472, 836, 921, 1013, 1360
BspANI GGCC 6 cut(s) 540, 632, 684, 889, 1593, 1634
BspCNI CTCAG 3 cut(s) 330, 438, 803
BspHI TCATGA 1 cut(s) 1672
BspLI GGNNCC 6 cut(s) 178, 551, 816, 925, 1318, 1364
BspMAI CTGCAG 1 cut(s) 1390
BspMI ACCTGC 1 cut(s) 119
BspOI GCTAGC 1 cut(s) 1541
BspPI GGATC 7 cut(s) 354, 572, 605, 809, 822, 1122, 1269
BspT107I GGYRCC 1 cut(s) 549
BsrDI GCAATG 2 cut(s) 405, 916
BsrGI TGTACA 2 cut(s) 675, 1184
BsrI ACTGG 6 cut(s) 418, 541, 623, 985, 1029, 1263
BssECI CCNNGG 4 cut(s) 172, 226, 561, 819
BssMI GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
BssNAI GTATAC 1 cut(s) 233
BssNI GRCGYC 1 cut(s) 550
BssT1I CCWWGG 2 cut(s) 172, 226
Bst1107I GTATAC 1 cut(s) 233
Bst2UI CCWGG 5 cut(s) 132, 507, 562, 686, 714
Bst4CI ACNGT 5 cut(s) 41, 702, 778, 932, 1178
Bst6I CTCTTC 2 cut(s) 27, 1523
BstACI GRCGYC 1 cut(s) 550
BstAUI TGTACA 2 cut(s) 675, 1184
BstC8I GCNNGC 3 cut(s) 772, 1169, 1539
BstDEI CTNAG 3 cut(s) 317, 446, 790
BstDSI CCRYGG 1 cut(s) 819
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 4 cut(s) 380, 433, 484, 557
BstH2I RGCGCY 2 cut(s) 553, 572
BstHHI GCGC 2 cut(s) 552, 571
BstKTI GATC 8 cut(s) 349, 484, 580, 613, 817, 1117, 1264, 1773
BstMAI GTCTC 3 cut(s) 39, 784, 1387
BstMBI GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
BstMWI GCNNNNNNNGC 2 cut(s) 767, 844
BstNI CCWGG 5 cut(s) 132, 507, 562, 686, 714
BstNSI RCATGY 2 cut(s) 1062, 1786
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 6 cut(s) 130, 505, 560, 586, 684, 712
BstSFI CTRYAG 1 cut(s) 1386
BstV1I GCAGC 5 cut(s) 578, 1022, 1400, 1403, 1528
BstX2I RGATCY 3 cut(s) 610, 814, 1261
BstYI RGATCY 3 cut(s) 610, 814, 1261
BstZ17I GTATAC 1 cut(s) 233
BsuI GTATCC 1 cut(s) 682
BsuRI GGCC 6 cut(s) 540, 632, 684, 889, 1593, 1634
BtgI CCRYGG 1 cut(s) 819
BtsCI GGATG 4 cut(s) 380, 433, 484, 557
BtsI GCAGTG 2 cut(s) 84, 328
BtsIMutI CAGTG 7 cut(s) 37, 84, 151, 328, 774, 937, 1036
BveI ACCTGC 1 cut(s) 119
Cac8I GCNNGC 3 cut(s) 772, 1169, 1539
CaiI CAGNNNCTG 2 cut(s) 936, 1035
CciI TCATGA 1 cut(s) 1672
CfoI GCGC 2 cut(s) 552, 571
Cfr13I GGNCC 6 cut(s) 177, 888, 923, 1026, 1362, 1592
Csp6I GTAC 5 cut(s) 108, 128, 620, 676, 1185
CviAII CATG 6 cut(s) 966, 1059, 1242, 1313, 1673, 1783
CviQI GTAC 5 cut(s) 108, 128, 620, 676, 1185
DdeI CTNAG 3 cut(s) 317, 446, 790
DinI GGCGCC 1 cut(s) 551
DpnI GATC 8 cut(s) 348, 483, 579, 612, 816, 1116, 1263, 1772
DpnII GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
DraIII CACNNNGTG 1 cut(s) 468
EaeI YGGCCR 3 cut(s) 538, 682, 1632
Eam1104I CTCTTC 2 cut(s) 27, 1523
EarI CTCTTC 2 cut(s) 27, 1523
EciI GGCGGA 1 cut(s) 487
Eco130I CCWWGG 2 cut(s) 172, 226
Eco147I AGGCCT 1 cut(s) 632
Eco32I GATATC 1 cut(s) 898
Eco47I GGWCC 4 cut(s) 177, 923, 1026, 1362
Eco47III AGCGCT 1 cut(s) 570
Eco57I CTGAAG 2 cut(s) 1504, 1581
Eco91I GGTNACC 1 cut(s) 149
EcoO109I RGGNCCY 1 cut(s) 177
EcoO65I GGTNACC 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 850
EcoRII CCWGG 5 cut(s) 130, 505, 560, 684, 712
EcoRV GATATC 1 cut(s) 898
EcoT14I CCWWGG 2 cut(s) 172, 226
EgeI GGCGCC 1 cut(s) 551
EheI GGCGCC 1 cut(s) 551
ErhI CCWWGG 2 cut(s) 172, 226
FaeI CATG 6 cut(s) 969, 1062, 1245, 1316, 1676, 1786
FalI AAGNNNNNCTT 4 cut(s) 506, 538, 584, 616
FaqI GGGAC 3 cut(s) 190, 909, 1243
FatI CATG 6 cut(s) 965, 1058, 1241, 1312, 1672, 1782
FblI GTMKAC 1 cut(s) 232
Fnu4HI GCNGC 5 cut(s) 567, 1036, 1389, 1392, 1542
FokI GGATG 4 cut(s) 367, 440, 471, 544
Fsp4HI GCNGC 5 cut(s) 567, 1036, 1389, 1392, 1542
FspBI CTAG 5 cut(s) 354, 422, 1265, 1325, 1538
GlaI GCGC 2 cut(s) 551, 570
GluI GCNGC 5 cut(s) 567, 1036, 1389, 1392, 1542
GsuI CTGGAG 1 cut(s) 1694
HaeII RGCGCY 2 cut(s) 553, 572
HaeIII GGCC 6 cut(s) 540, 632, 684, 889, 1593, 1634
HapII CCGG 2 cut(s) 588, 1112
HhaI GCGC 2 cut(s) 552, 571
Hin1I GRCGYC 1 cut(s) 550
Hin1II CATG 6 cut(s) 969, 1062, 1245, 1316, 1676, 1786
Hin6I GCGC 2 cut(s) 550, 569
HinP1I GCGC 2 cut(s) 550, 569
HincII GTYRAC 2 cut(s) 372, 1056
HindII GTYRAC 2 cut(s) 372, 1056
HindIII AAGCTT 2 cut(s) 1091, 1571
HinfI GANTC 6 cut(s) 237, 284, 296, 403, 881, 1157
HpaII CCGG 2 cut(s) 588, 1112
HphI GGTGA 4 cut(s) 589, 954, 959, 1114
Hpy166II GTNNAC 6 cut(s) 233, 372, 597, 676, 950, 1056
Hpy188I TCNGA 9 cut(s) 47, 351, 447, 493, 784, 1002, 1162, 1321, 1561
Hpy188III TCNNGA 5 cut(s) 203, 640, 1625, 1673, 1681
Hpy8I GTNNAC 6 cut(s) 233, 372, 597, 676, 950, 1056
HpyAV CCTTC 5 cut(s) 26, 610, 637, 1447, 1745
HpyCH4III ACNGT 5 cut(s) 41, 702, 778, 932, 1178
HpyCH4IV ACGT 2 cut(s) 69, 863
HpyCH4V TGCA 9 cut(s) 260, 398, 774, 969, 1038, 1289, 1376, 1388, 1484
HpyF10VI GCNNNNNNNGC 2 cut(s) 767, 844
HpyF3I CTNAG 3 cut(s) 317, 446, 790
HpySE526I ACGT 2 cut(s) 69, 863
Hsp92I GRCGYC 1 cut(s) 550
Hsp92II CATG 6 cut(s) 969, 1062, 1245, 1316, 1676, 1786
HspAI GCGC 2 cut(s) 550, 569
KasI GGCGCC 1 cut(s) 549
Kzo9I GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
LmnI GCTCC 2 cut(s) 474, 1322
Lsp1109I GCAGC 5 cut(s) 578, 1022, 1400, 1403, 1528
LweI GCATC 1 cut(s) 389
MaeI CTAG 5 cut(s) 354, 422, 1265, 1325, 1538
MaeII ACGT 2 cut(s) 69, 863
MaeIII GTNAC 6 cut(s) 65, 149, 460, 1064, 1079, 1154
MalI GATC 8 cut(s) 348, 483, 579, 612, 816, 1116, 1263, 1772
MboI GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
MboII GAAGA 9 cut(s) 14, 17, 159, 187, 291, 467, 1447, 1507, 1510
MflI RGATCY 3 cut(s) 610, 814, 1261
MhlI GDGCHC 1 cut(s) 84
MlsI TGGCCA 3 cut(s) 540, 684, 1634
MluNI TGGCCA 3 cut(s) 540, 684, 1634
Mly113I GGCGCC 1 cut(s) 550
MlyI GAGTC 1 cut(s) 1151
MmeI TCCRAC 4 cut(s) 324, 792, 849, 1378
Mox20I TGGCCA 3 cut(s) 540, 684, 1634
MscI TGGCCA 3 cut(s) 540, 684, 1634
MseI TTAA 5 cut(s) 513, 831, 1347, 1526, 1837
MslI CAYNNNNRTG 4 cut(s) 144, 265, 964, 970
Msp20I TGGCCA 3 cut(s) 540, 684, 1634
MspA1I CMGCKG 1 cut(s) 1013
MspI CCGG 2 cut(s) 588, 1112
MspR9I CCNGG 6 cut(s) 132, 507, 562, 588, 686, 714
Mva1269I GAATGC 1 cut(s) 1169
MvaI CCWGG 5 cut(s) 132, 507, 562, 686, 714
MwoI GCNNNNNNNGC 2 cut(s) 767, 844
NarI GGCGCC 1 cut(s) 550
NciI CCSGG 1 cut(s) 588
NdeII GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
NheI GCTAGC 1 cut(s) 1537
NlaIII CATG 6 cut(s) 969, 1062, 1245, 1316, 1676, 1786
NlaIV GGNNCC 6 cut(s) 178, 551, 816, 925, 1318, 1364
NmuCI GTSAC 2 cut(s) 460, 1154
NspI RCATGY 2 cut(s) 1062, 1786
PagI TCATGA 1 cut(s) 1672
PceI AGGCCT 1 cut(s) 632
PciI ACATGT 2 cut(s) 1058, 1782
PctI GAATGC 1 cut(s) 1169
PfeI GAWTC 5 cut(s) 237, 284, 296, 403, 881
PkrI GCNGC 5 cut(s) 568, 1037, 1390, 1393, 1543
PleI GAGTC 1 cut(s) 1151
PluTI GGCGCC 1 cut(s) 553
PpsI GAGTC 1 cut(s) 1151
PpuMI RGGWCCY 1 cut(s) 177
PscI ACATGT 2 cut(s) 1058, 1782
PsiI TTATAA 1 cut(s) 1602
Psp5II RGGWCCY 1 cut(s) 177
Psp6I CCWGG 5 cut(s) 130, 505, 560, 684, 712
PspEI GGTNACC 1 cut(s) 149
PspGI CCWGG 5 cut(s) 130, 505, 560, 684, 712
PspN4I GGNNCC 6 cut(s) 178, 551, 816, 925, 1318, 1364
PspPI GGNCC 6 cut(s) 177, 888, 923, 1026, 1362, 1592
PspPPI RGGWCCY 1 cut(s) 177
PstI CTGCAG 1 cut(s) 1390
PstNI CAGNNNCTG 2 cut(s) 936, 1035
PsuI RGATCY 3 cut(s) 610, 814, 1261
RsaI GTAC 5 cut(s) 109, 129, 621, 677, 1186
RsaNI GTAC 5 cut(s) 108, 128, 620, 676, 1185
RseI CAYNNNNRTG 4 cut(s) 144, 265, 964, 970
SaqAI TTAA 5 cut(s) 513, 831, 1347, 1526, 1837
SatI GCNGC 5 cut(s) 567, 1036, 1389, 1392, 1542
Sau3AI GATC 8 cut(s) 346, 481, 577, 610, 814, 1114, 1261, 1770
Sau96I GGNCC 6 cut(s) 177, 888, 923, 1026, 1362, 1592
SchI GAGTC 1 cut(s) 1151
ScrFI CCNGG 6 cut(s) 132, 507, 562, 588, 686, 714
SduI GDGCHC 1 cut(s) 84
SfaNI GCATC 1 cut(s) 389
SfcI CTRYAG 1 cut(s) 1386
SfoI GGCGCC 1 cut(s) 551
SinI GGWCC 4 cut(s) 177, 923, 1026, 1362
SmiMI CAYNNNNRTG 4 cut(s) 144, 265, 964, 970
SseBI AGGCCT 1 cut(s) 632
SsiI CCGC 5 cut(s) 472, 836, 921, 1013, 1360
SspDI GGCGCC 1 cut(s) 549
SspI AATATT 1 cut(s) 1225
SspMI CTAG 5 cut(s) 354, 422, 1265, 1325, 1538
StuI AGGCCT 1 cut(s) 632
StyD4I CCNGG 6 cut(s) 130, 505, 560, 586, 684, 712
StyI CCWWGG 2 cut(s) 172, 226
TaaI ACNGT 5 cut(s) 41, 702, 778, 932, 1178
TaiI ACGT 2 cut(s) 72, 866
TaqI TCGA 2 cut(s) 480, 1792
TatI WGTACW 2 cut(s) 675, 1184
TfiI GAWTC 5 cut(s) 237, 284, 296, 403, 881
Tru1I TTAA 5 cut(s) 513, 831, 1347, 1526, 1837
Tru9I TTAA 5 cut(s) 513, 831, 1347, 1526, 1837
TscAI CASTG 7 cut(s) 44, 84, 151, 328, 781, 937, 1036
TseFI GTSAC 2 cut(s) 460, 1154
TseI GCWGC 5 cut(s) 566, 1035, 1388, 1391, 1541
Tsp45I GTSAC 2 cut(s) 460, 1154
TspDTI ATGAA 8 cut(s) 17, 80, 174, 416, 726, 1301, 1773, 1791
TspGWI ACGGA 4 cut(s) 373, 447, 645, 1333
TspRI CASTG 7 cut(s) 44, 84, 151, 328, 781, 937, 1036
VpaK11BI GGWCC 4 cut(s) 177, 923, 1026, 1362
XapI RAATTY 4 cut(s) 208, 850, 1608, 1805
XceI RCATGY 2 cut(s) 1062, 1786
XmiI GTMKAC 1 cut(s) 232
XspI CTAG 5 cut(s) 354, 422, 1265, 1325, 1538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.