RLG00000030067

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000114
Physical Location & Seq
Forward (+)
54439165 .. 54442262
3098 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030067

Sequence Viewer

Length: 2472 bp
ATGAACCTTTTTTTCTTTCCTCTTCTTCCTCTGTCTCACTGTTACCTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTGCCAAGACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTCTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGATATACGATTCAACACATTCCCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCAGGTTTCTTTATGCTCGGCAGTGATGGAAATCTTGTGTTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTGTGTTGCCTGGCATGAAGATTAGCTTGAACAAAACGACTGGCCAACAAAGGCTCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGGAAGTTCACCTTCGGCATAGATCCTAAAGTACCATCTCAGGCCTTTATCTGGAAGGAAACTACTCCGTATGCTAGAAGTTCTGTGTACGTTGGCCAGTATACAAGAACACAGTTTCAAAATCCAGGTGGAACTGTGTTTTTCTATACATTCAACTTTGATGTTGATGAGGTTTATCTTGCTTGCAGTATCTCGGATAGCTCAGTAAAATGGAGGGCCTGGTTGGATCCCACGGGGCAACTTAAACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGAAGTAAGGAATTCATGGCCCGTTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAACAGTGCCTGTCTTAGAGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTAGGGGATTGGTCCAGTGGCTGCATTATCGAAAAGGTGTTGACATGTGGTAACGGCATACAAGGTTACTTTTCAAAGCTTGAAAACGTGAAACTGCCGGATCATTTTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGCGACAGACGGAAGTACTATTGGGACTTGTTTTGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTATTGGTGCAAATGATATTTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCCGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCAGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAATTGGAAAAGAAAGGTAAGCAGAATATAAGTAATGTTAGAGCAGGAGGTGGGAAGAATGATACAGAATTACCACTCTTCAGTTTAAGGAGTATGCTAGCTGCTACAAACAACTTCTCTGAAGCGAATAAGCTTGGAGAGGGTGGGTTCGGCGCTGTTTATAAGGGAATTTTGCCAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGGCATCATGAGTTCAAGAATGAGTTGAAACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGTTGTATGGAAGGAGATGAAATGATATTGATCTATGAATACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATGCCTTTGAAAAGACAAAGTTAGATTGGGATACACGCTTTCGAATTATACAAGGTATTGCTCAAGGAGTACTATATATCCACAAGTACTCTAGATTGAAAATCATCCACAGAGATCTAAAAGCAAGCAATGTTCTGTTGGACGGAACAATGAACCCCAAAGTGTCTGACTTTGGAATGGCGAGAATTTTTGACAGAAATCAAATTGAAGCAAATACTAACAAGGTTGTTGGAACATACGGCTATATGTCTCCTGAATATGCACTCTTTGGTCATTTCTCCGAGAAATTGGATGTATTTAGTTTCGGAGTATTGTTGTTAGAGATTGTAAGCGGAAAGAAGAATGCTTCTTTTTATAGCTTTGAAAATTCACTAACGCTTGCTCAATGGGTATGGGAATTATGGAAAGAAGGTAGAGGAGTGGAGGTAATTGACGCAACAGTAAGGGAAACATGCCGAATTCATGAAGCTTTGCGGTGTATCCATGTCGGACTTTTGTGCGTTCAAGAAGCTCCAGTTGATCGACCAACAATGTCATCCGTGATTCATATGCTCGAGGTTGACGAAGCTACATCACTTCCACCGTTCAAAGAACCAGCTTTTTCAACCTGTAGAAATTCAAGTCCTGTAACCATTTTTTCTGACAATGTAATCACCATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

824

Amino Acids

91.94

Weight (kDa)

6.64

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 80 - 180 5e-31 D-mannose binding lectin
S_locus_glycop PF00954 234 - 324 1.4e-14 S-locus glycoprotein domain
PAN_2 PF08276 353 - 414 4.9e-14 PAN-like domain
Pkinase PF00069 512 - 714 1e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 514 - 781 1.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1578
Acc36I ACCTGC 1 cut(s) 95
AccI GTMKAC 1 cut(s) 665
AciI CCGC 5 cut(s) 897, 989, 1336, 2124, 2266
AclWI GGATC 7 cut(s) 330, 548, 581, 785, 798, 1098, 1245
AcoI YGGCCR 3 cut(s) 514, 658, 1608
AcsI RAATTY 9 cut(s) 184, 826, 856, 1584, 1781, 1977, 2158, 2250, 2407
AcuI CTGAAG 2 cut(s) 1480, 1557
AdeI CACNNNGTG 1 cut(s) 444
AfaI GTAC 8 cut(s) 85, 105, 597, 653, 1162, 1198, 1863, 1880
AfeI AGCGCT 1 cut(s) 546
AfiI CCNNNNNNNGG 6 cut(s) 136, 563, 615, 988, 1335, 1617
AflIII ACRYGT 2 cut(s) 1034, 1758
AjnI CCWGG 6 cut(s) 106, 277, 481, 536, 688, 782
AjuI GAANNNNNNNTTGG 2 cut(s) 1403, 1435
AloI GAACNNNNNNTCC 2 cut(s) 402, 434
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 3 cut(s) 39, 1363, 2046
AlwI GGATC 7 cut(s) 330, 548, 581, 785, 798, 1098, 1245
AlwNI CAGNNNCTG 2 cut(s) 912, 1011
Ama87I CYCGRG 2 cut(s) 563, 2345
Aor51HI AGCGCT 1 cut(s) 546
AoxI GGCC 6 cut(s) 514, 606, 658, 780, 863, 1608
ApeKI GCWGC 5 cut(s) 542, 1011, 1364, 1367, 1517
ApoI RAATTY 9 cut(s) 184, 826, 856, 1584, 1781, 1977, 2158, 2250, 2407
AspLEI GCGC 2 cut(s) 547, 1571
AspS9I GGNCC 6 cut(s) 153, 780, 864, 899, 1002, 1338
AsuC2I CCSGG 2 cut(s) 564, 565
AsuHPI GGTGA 4 cut(s) 565, 930, 935, 2437
AsuII TTCGAA 1 cut(s) 1834
AsuNHI GCTAGC 1 cut(s) 1513
AvaI CYCGRG 2 cut(s) 563, 2345
AvaII GGWCC 4 cut(s) 153, 899, 1002, 1338
BalI TGGCCA 3 cut(s) 516, 660, 1610
BamHI GGATCC 1 cut(s) 790
Bbv12I GWGCWC 1 cut(s) 60
BbvI GCAGC 5 cut(s) 554, 998, 1376, 1379, 1504
BccI CCATC 2 cut(s) 296, 607
BceAI ACGGC 2 cut(s) 1060, 2047
BciT130I CCWGG 6 cut(s) 108, 279, 483, 538, 690, 784
BciVI GTATCC 3 cut(s) 397, 1816, 2282
BcnI CCSGG 2 cut(s) 564, 565
BcoDI GTCTC 3 cut(s) 39, 1363, 2046
BfaI CTAG 8 cut(s) 330, 398, 639, 831, 1241, 1301, 1514, 1884
BfmI CTRYAG 2 cut(s) 1362, 2401
BfoI RGCGCY 2 cut(s) 548, 1572
BfuAI ACCTGC 1 cut(s) 95
BfuI GTATCC 3 cut(s) 397, 1816, 2282
BglII AGATCT 1 cut(s) 1906
BisI GCNGC 5 cut(s) 543, 1012, 1365, 1368, 1518
BlsI GCNGC 5 cut(s) 544, 1013, 1366, 1369, 1519
BmcAI AGTACT 3 cut(s) 1198, 1863, 1880
Bme1390I CCNGG 8 cut(s) 108, 279, 483, 538, 564, 565, 690, 784
Bme18I GGWCC 4 cut(s) 153, 899, 1002, 1338
BmeT110I CYCGRG 2 cut(s) 563, 2345
BmgT120I GGNCC 6 cut(s) 153, 780, 864, 899, 1002, 1338
BmiI GGNNCC 6 cut(s) 154, 527, 792, 901, 1294, 1340
BmrFI CCNGG 8 cut(s) 108, 279, 483, 538, 564, 565, 690, 784
BmsI GCATC 3 cut(s) 365, 1654, 1783
BmtI GCTAGC 1 cut(s) 1517
BplI GAGNNNNNCTC 2 cut(s) 1118, 1150
BpmI CTGGAG 3 cut(s) 261, 1670, 2289
Bpu14I TTCGAA 1 cut(s) 1834
BpuEI CTTGAG 1 cut(s) 1839
BpuMI CCSGG 2 cut(s) 564, 565
BsaBI GATNNNNATC 2 cut(s) 306, 1745
BsaJI CCNNGG 4 cut(s) 148, 537, 563, 795
BsaWI WCCGGW 1 cut(s) 407
BsaXI ACNNNNNCTCC 4 cut(s) 510, 540, 2202, 2232
Bsc4I CCNNNNNNNGG 6 cut(s) 136, 563, 615, 988, 1335, 1617
Bse1I ACTGG 7 cut(s) 394, 517, 661, 961, 1005, 1239, 2306
Bse3DI GCAATG 3 cut(s) 381, 892, 1927
Bse8I GATNNNNATC 2 cut(s) 306, 1745
BseBI CCWGG 6 cut(s) 108, 279, 483, 538, 690, 784
BseDI CCNNGG 4 cut(s) 148, 537, 563, 795
BseGI GGATG 6 cut(s) 356, 460, 533, 1896, 2089, 2327
BseJI GATNNNNATC 2 cut(s) 306, 1745
BseLI CCNNNNNNNGG 6 cut(s) 136, 563, 615, 988, 1335, 1617
BseMI GCAATG 3 cut(s) 381, 892, 1927
BseMII CTCAG 3 cut(s) 413, 617, 780
BseNI ACTGG 7 cut(s) 394, 517, 661, 961, 1005, 1239, 2306
BseRI GAGGAG 1 cut(s) 2223
BseXI GCAGC 5 cut(s) 554, 998, 1376, 1379, 1504
BshFI GGCC 6 cut(s) 516, 608, 660, 782, 865, 1610
BsiHKAI GWGCWC 1 cut(s) 60
BsiHKCI CYCGRG 2 cut(s) 563, 2345
BsiSI CCGG 3 cut(s) 408, 564, 1088
BslFI GGGAC 3 cut(s) 166, 885, 1219
BslI CCNNNNNNNGG 6 cut(s) 136, 563, 615, 988, 1335, 1617
BsmAI GTCTC 3 cut(s) 39, 1363, 2046
BsmFI GGGAC 3 cut(s) 166, 885, 1219
BsmI GAATGC 2 cut(s) 1145, 2140
BsnI GGCC 6 cut(s) 516, 608, 660, 782, 865, 1610
BsoBI CYCGRG 2 cut(s) 563, 2345
Bsp119I TTCGAA 1 cut(s) 1834
Bsp1286I GDGCHC 1 cut(s) 60
Bsp1407I TGTACA 1 cut(s) 1160
BspACI CCGC 5 cut(s) 897, 989, 1336, 2124, 2266
BspANI GGCC 6 cut(s) 516, 608, 660, 782, 865, 1610
BspCNI CTCAG 3 cut(s) 414, 616, 779
BspHI TCATGA 2 cut(s) 1648, 2254
BspLI GGNNCC 6 cut(s) 154, 527, 792, 901, 1294, 1340
BspMAI CTGCAG 1 cut(s) 1366
BspMI ACCTGC 1 cut(s) 95
BspOI GCTAGC 1 cut(s) 1517
BspPI GGATC 7 cut(s) 330, 548, 581, 785, 798, 1098, 1245
BspT104I TTCGAA 1 cut(s) 1834
BsrDI GCAATG 3 cut(s) 381, 892, 1927
BsrGI TGTACA 1 cut(s) 1160
BsrI ACTGG 7 cut(s) 394, 517, 661, 961, 1005, 1239, 2306
BssECI CCNNGG 4 cut(s) 148, 537, 563, 795
BssNAI GTATAC 1 cut(s) 666
BssT1I CCWWGG 1 cut(s) 148
Bst1107I GTATAC 1 cut(s) 666
Bst2UI CCWGG 6 cut(s) 108, 279, 483, 538, 690, 784
Bst4CI ACNGT 9 cut(s) 41, 55, 475, 678, 700, 908, 1154, 2233, 2376
Bst6I CTCTTC 2 cut(s) 27, 1499
BstAUI TGTACA 1 cut(s) 1160
BstBI TTCGAA 1 cut(s) 1834
BstC8I GCNNGC 5 cut(s) 748, 1145, 1515, 1918, 2172
BstDEI CTNAG 4 cut(s) 422, 603, 766, 917
BstDSI CCRYGG 1 cut(s) 795
BstEII GGTNACC 1 cut(s) 125
BstF5I GGATG 6 cut(s) 356, 460, 533, 1896, 2089, 2327
BstH2I RGCGCY 2 cut(s) 548, 1572
BstHHI GCGC 2 cut(s) 547, 1571
BstMAI GTCTC 3 cut(s) 39, 1363, 2046
BstMWI GCNNNNNNNGC 1 cut(s) 820
BstNI CCWGG 6 cut(s) 108, 279, 483, 538, 690, 784
BstNSI RCATGY 3 cut(s) 1038, 1762, 2247
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 8 cut(s) 106, 277, 481, 536, 562, 563, 688, 782
BstSFI CTRYAG 2 cut(s) 1362, 2401
BstV1I GCAGC 5 cut(s) 554, 998, 1376, 1379, 1504
BstX2I RGATCY 4 cut(s) 586, 790, 1237, 1906
BstYI RGATCY 4 cut(s) 586, 790, 1237, 1906
BstZ17I GTATAC 1 cut(s) 666
BsuI GTATCC 3 cut(s) 397, 1816, 2282
BsuRI GGCC 6 cut(s) 516, 608, 660, 782, 865, 1610
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 6 cut(s) 356, 460, 533, 1896, 2089, 2327
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 6 cut(s) 37, 60, 127, 304, 913, 1012
BveI ACCTGC 1 cut(s) 95
Cac8I GCNNGC 5 cut(s) 748, 1145, 1515, 1918, 2172
CaiI CAGNNNCTG 2 cut(s) 912, 1011
CciI TCATGA 2 cut(s) 1648, 2254
CfoI GCGC 2 cut(s) 547, 1571
Cfr13I GGNCC 6 cut(s) 153, 780, 864, 899, 1002, 1338
Cfr9I CCCGGG 1 cut(s) 563
CseI GACGC 1 cut(s) 2234
Csp6I GTAC 8 cut(s) 84, 104, 596, 652, 1161, 1197, 1862, 1879
CviQI GTAC 8 cut(s) 84, 104, 596, 652, 1161, 1197, 1862, 1879
DdeI CTNAG 4 cut(s) 422, 603, 766, 917
DraIII CACNNNGTG 1 cut(s) 444
EaeI YGGCCR 3 cut(s) 514, 658, 1608
Eam1104I CTCTTC 2 cut(s) 27, 1499
EarI CTCTTC 2 cut(s) 27, 1499
Eco130I CCWWGG 1 cut(s) 148
Eco147I AGGCCT 1 cut(s) 608
Eco32I GATATC 1 cut(s) 874
Eco47I GGWCC 4 cut(s) 153, 899, 1002, 1338
Eco47III AGCGCT 1 cut(s) 546
Eco57I CTGAAG 2 cut(s) 1480, 1557
Eco88I CYCGRG 2 cut(s) 563, 2345
Eco91I GGTNACC 1 cut(s) 125
EcoO109I RGGNCCY 2 cut(s) 153, 780
EcoO65I GGTNACC 1 cut(s) 125
EcoRI GAATTC 3 cut(s) 826, 856, 2250
EcoRII CCWGG 6 cut(s) 106, 277, 481, 536, 688, 782
EcoRV GATATC 1 cut(s) 874
EcoT14I CCWWGG 1 cut(s) 148
ErhI CCWWGG 1 cut(s) 148
FalI AAGNNNNNCTT 4 cut(s) 482, 514, 560, 592
FaqI GGGAC 3 cut(s) 166, 885, 1219
FauNDI CATATG 1 cut(s) 2340
FblI GTMKAC 1 cut(s) 665
Fnu4HI GCNGC 5 cut(s) 543, 1012, 1365, 1368, 1518
FokI GGATG 6 cut(s) 343, 447, 520, 1883, 2096, 2314
Fsp4HI GCNGC 5 cut(s) 543, 1012, 1365, 1368, 1518
FspBI CTAG 8 cut(s) 330, 398, 639, 831, 1241, 1301, 1514, 1884
GlaI GCGC 2 cut(s) 546, 1570
GluI GCNGC 5 cut(s) 543, 1012, 1365, 1368, 1518
GsuI CTGGAG 3 cut(s) 261, 1670, 2289
HaeII RGCGCY 2 cut(s) 548, 1572
HaeIII GGCC 6 cut(s) 516, 608, 660, 782, 865, 1610
HapII CCGG 3 cut(s) 408, 564, 1088
HgaI GACGC 1 cut(s) 2234
HhaI GCGC 2 cut(s) 547, 1571
Hin6I GCGC 2 cut(s) 545, 1569
HinP1I GCGC 2 cut(s) 545, 1569
HincII GTYRAC 3 cut(s) 348, 1032, 2353
HindII GTYRAC 3 cut(s) 348, 1032, 2353
HindIII AAGCTT 3 cut(s) 1067, 1547, 2259
HinfI GANTC 7 cut(s) 133, 213, 260, 272, 379, 1133, 2335
HpaII CCGG 3 cut(s) 408, 564, 1088
HphI GGTGA 4 cut(s) 565, 930, 935, 2437
Hpy166II GTNNAC 7 cut(s) 348, 573, 652, 666, 926, 1032, 2353
Hpy188III TCNNGA 9 cut(s) 179, 616, 1601, 1649, 1657, 1884, 2045, 2255, 2297
Hpy8I GTNNAC 7 cut(s) 348, 573, 652, 666, 926, 1032, 2353
HpyAV CCTTC 4 cut(s) 586, 613, 1721, 2195
HpyCH4III ACNGT 9 cut(s) 41, 55, 475, 678, 700, 908, 1154, 2233, 2376
HpyCH4IV ACGT 3 cut(s) 654, 839, 1077
HpyF10VI GCNNNNNNNGC 1 cut(s) 820
HpyF3I CTNAG 4 cut(s) 422, 603, 766, 917
HpySE526I ACGT 3 cut(s) 654, 839, 1077
HspAI GCGC 2 cut(s) 545, 1569
LmnI GCTCC 3 cut(s) 531, 1298, 2308
Lsp1109I GCAGC 5 cut(s) 554, 998, 1376, 1379, 1504
LweI GCATC 3 cut(s) 365, 1654, 1783
MaeI CTAG 8 cut(s) 330, 398, 639, 831, 1241, 1301, 1514, 1884
MaeII ACGT 3 cut(s) 654, 839, 1077
MaeIII GTNAC 8 cut(s) 41, 49, 125, 436, 1040, 1055, 1130, 2419
MflI RGATCY 4 cut(s) 586, 790, 1237, 1906
MhlI GDGCHC 1 cut(s) 60
MlsI TGGCCA 3 cut(s) 516, 660, 1610
MluNI TGGCCA 3 cut(s) 516, 660, 1610
MlyI GAGTC 2 cut(s) 127, 1127
MmeI TCCRAC 7 cut(s) 300, 768, 825, 1354, 1911, 2002, 2260
Mox20I TGGCCA 3 cut(s) 516, 660, 1610
MscI TGGCCA 3 cut(s) 516, 660, 1610
MseI TTAA 3 cut(s) 807, 1323, 1502
MslI CAYNNNNRTG 4 cut(s) 120, 241, 940, 946
Msp20I TGGCCA 3 cut(s) 516, 660, 1610
MspI CCGG 3 cut(s) 408, 564, 1088
MspR9I CCNGG 8 cut(s) 108, 279, 483, 538, 564, 565, 690, 784
Mva1269I GAATGC 2 cut(s) 1145, 2140
MvaI CCWGG 6 cut(s) 108, 279, 483, 538, 690, 784
MwoI GCNNNNNNNGC 1 cut(s) 820
NciI CCSGG 2 cut(s) 564, 565
NdeI CATATG 1 cut(s) 2340
NheI GCTAGC 1 cut(s) 1513
NlaIV GGNNCC 6 cut(s) 154, 527, 792, 901, 1294, 1340
NmeAIII GCCGAG 1 cut(s) 273
NmuCI GTSAC 2 cut(s) 436, 1130
NspI RCATGY 3 cut(s) 1038, 1762, 2247
NspV TTCGAA 1 cut(s) 1834
PaeR7I CTCGAG 1 cut(s) 2345
PagI TCATGA 2 cut(s) 1648, 2254
PceI AGGCCT 1 cut(s) 608
PciI ACATGT 2 cut(s) 1034, 1758
PcsI WCGNNNNNNNCGW 1 cut(s) 2352
PctI GAATGC 2 cut(s) 1145, 2140
PfeI GAWTC 5 cut(s) 213, 260, 272, 379, 2335
PkrI GCNGC 5 cut(s) 544, 1013, 1366, 1369, 1519
PleI GAGTC 2 cut(s) 127, 1127
PpsI GAGTC 2 cut(s) 127, 1127
PpuMI RGGWCCY 1 cut(s) 153
PscI ACATGT 2 cut(s) 1034, 1758
PsiI TTATAA 1 cut(s) 1578
Psp5II RGGWCCY 1 cut(s) 153
Psp6I CCWGG 6 cut(s) 106, 277, 481, 536, 688, 782
PspEI GGTNACC 1 cut(s) 125
PspGI CCWGG 6 cut(s) 106, 277, 481, 536, 688, 782
PspN4I GGNNCC 6 cut(s) 154, 527, 792, 901, 1294, 1340
PspPI GGNCC 6 cut(s) 153, 780, 864, 899, 1002, 1338
PspPPI RGGWCCY 1 cut(s) 153
PspXI VCTCGAGB 1 cut(s) 2345
PstI CTGCAG 1 cut(s) 1366
PstNI CAGNNNCTG 2 cut(s) 912, 1011
PsuI RGATCY 4 cut(s) 586, 790, 1237, 1906
RsaI GTAC 8 cut(s) 85, 105, 597, 653, 1162, 1198, 1863, 1880
RsaNI GTAC 8 cut(s) 84, 104, 596, 652, 1161, 1197, 1862, 1879
RseI CAYNNNNRTG 4 cut(s) 120, 241, 940, 946
SaqAI TTAA 3 cut(s) 807, 1323, 1502
SatI GCNGC 5 cut(s) 543, 1012, 1365, 1368, 1518
Sau96I GGNCC 6 cut(s) 153, 780, 864, 899, 1002, 1338
ScaI AGTACT 3 cut(s) 1198, 1863, 1880
SchI GAGTC 2 cut(s) 127, 1127
ScrFI CCNGG 8 cut(s) 108, 279, 483, 538, 564, 565, 690, 784
SduI GDGCHC 1 cut(s) 60
SfaNI GCATC 3 cut(s) 365, 1654, 1783
SfcI CTRYAG 2 cut(s) 1362, 2401
Sfr274I CTCGAG 1 cut(s) 2345
SfuI TTCGAA 1 cut(s) 1834
SinI GGWCC 4 cut(s) 153, 899, 1002, 1338
SlaI CTCGAG 1 cut(s) 2345
SmaI CCCGGG 1 cut(s) 565
SmiMI CAYNNNNRTG 4 cut(s) 120, 241, 940, 946
SmlI CTYRAG 2 cut(s) 1854, 2345
SmoI CTYRAG 2 cut(s) 1854, 2345
SseBI AGGCCT 1 cut(s) 608
SsiI CCGC 5 cut(s) 897, 989, 1336, 2124, 2266
SspMI CTAG 8 cut(s) 330, 398, 639, 831, 1241, 1301, 1514, 1884
StuI AGGCCT 1 cut(s) 608
StyD4I CCNGG 8 cut(s) 106, 277, 481, 536, 562, 563, 688, 782
StyI CCWWGG 1 cut(s) 148
TaaI ACNGT 9 cut(s) 41, 55, 475, 678, 700, 908, 1154, 2233, 2376
TaiI ACGT 3 cut(s) 657, 842, 1080
TaqI TCGA 7 cut(s) 456, 1020, 1768, 1834, 2314, 2346, 2467
TatI WGTACW 4 cut(s) 1160, 1196, 1861, 1878
TfiI GAWTC 5 cut(s) 213, 260, 272, 379, 2335
Tru1I TTAA 3 cut(s) 807, 1323, 1502
Tru9I TTAA 3 cut(s) 807, 1323, 1502
TscAI CASTG 6 cut(s) 44, 60, 127, 304, 913, 1012
TseFI GTSAC 2 cut(s) 436, 1130
TseI GCWGC 5 cut(s) 542, 1011, 1364, 1367, 1517
Tsp45I GTSAC 2 cut(s) 436, 1130
TspGWI ACGGA 6 cut(s) 349, 621, 1206, 1309, 1950, 2320
TspMI CCCGGG 1 cut(s) 563
TspRI CASTG 6 cut(s) 44, 60, 127, 304, 913, 1012
VpaK11BI GGWCC 4 cut(s) 153, 899, 1002, 1338
XapI RAATTY 9 cut(s) 184, 826, 856, 1584, 1781, 1977, 2158, 2250, 2407
XbaI TCTAGA 1 cut(s) 1883
XceI RCATGY 3 cut(s) 1038, 1762, 2247
XhoI CTCGAG 1 cut(s) 2345
XmaI CCCGGG 1 cut(s) 563
XmiI GTMKAC 1 cut(s) 665
XspI CTAG 8 cut(s) 330, 398, 639, 831, 1241, 1301, 1514, 1884
ZrmI AGTACT 3 cut(s) 1198, 1863, 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.