Rroxscaffold_5G00344450

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000114
Physical Location & Seq
Forward (+)
14572076 .. 14575174
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00344450.1

Sequence Viewer

Length: 1938 bp
ATGATAGAAATTGGATTTTGTCATTTTATGGTTGAAGTCATGAAATTCATTGGGCGTTTGTTGGTGTTTCTCTCACTACTTCCTCTCTCTACCGCTCAATCTCCAAATATAATTAGCAACAGAACAACATGCCCCATTGATCTCAACTATGTTCGTAGAGTCCCCTTCAACTCCTCATTTTGCAAAAACTTCCGAGCCCTTCCTAAAACCCCCCAAATGGACATCACCGAGATCCCATGTTGTCAAGTTCTATTGTCTCTCTTTGCAATAGGCCTTGCTCAACACCTCAAGGCCACCACTTTTTTCCTACTCCCCAACATAGCAGCCTCAAATTCTTGCCTCCAAAACTTCCAGTCGAAGCTCACCACTTTAGCACTCCCTTCCAATCTTGTCTCTTATTGTTTGGACCCTATACAATTTGTAACTAGCCCCAACCTCTGCGCCCAAATTGAGTCTTCCCAAGATTGGGTCTCTAAGCTTGATCAGACCACTTCACTTGACTCTGCATGCAAGGCAGACCTCACTGACCTATCATCCTGTGATGCTTGCGTGGCGGCTGGCCTTAGAATTCAGCAAGAATTAATCACCGTTGATGGTAACAGTTCTCACTCTAGAGATTGTTGGTTCTTCACATTAATGTATGCAGCAGCTGGTATTATCAATGACTCTGAACCTGAAAGTGAGGGTAACCTGTCTTGTGTTTTCGGTTTGTCTTTATTGAATAACACTCTTGTGGACACTGCTCTGGACACTCCTGTGAATTTGCCCAAAAAGAGCTATACAGCTCTTGTAACTGCAGTAGTCTCAGCAACAGGAGGGTTGCTTACGATATTATTTTTATACTTCTTATGGAAGAAATCTTTGGGAAAGAAAAGGGCATATAGTGAGAATATTCGGAATTTTAGTGCTGGAGATGAGAAGAATGATACAGAACTACCGGTCTTAAGTTTAAGGAGTATATTAGCTGCTACAAACAACTTCTCTGAAGCTAATAAACTAGGAGAGGGAGGGTTTGGCCCTGTTTATAAGGGCATCTTACAAGAAAATCAAGAGGTAGCCATAAAAAGACTGTCAAAGAAGTCAGGGCAAGGATATCAGGAGTTCATGAATGAGTTAAAACTTATAGCAAAGCTCCAACATAACAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAAAGGAAGAAATGATATTAATCTACGAGTACATGACTAATCGAAGTTTGGACAAATTTTTGTTTGATCCAAGGGAAAACACAAAGTTGGATTGGGGTAAACGCTTTCGGATTATAGAAGGTATAGCTCAAGGAGTACTTTATATCCACAAACACTCTAGATTGAAAATCATTCACCGGGATCTAAAAGTAAGTAATGTTCTGTTGGATGAAGAAATGAACCCCAAAATTTCAGATTTCGGAATGGCAAAGATTTTCGAGATAAATCAGACTGAAGCAAGTACCAACAGGGTTGTTGGGACATACGGTTACATGTCACCTGAGTATGCACGCTATGGTCATTTTTCTGAGAAATTGGACGTATTTAGTTTTGGAGTGTTGTTGCTGGAGATTGTAAGTGGAAGGAAGAATTCCGCTTTCTATCATCTTGAACACCCACTAACTCTTGCTGGATGGGCATGGAAATTATGGAAAGAAGGTAGAGGAATGGAGGTGATTGATGCATCAGTGAGAGAAACGTGTATGCCAAATGAAGCTTTAAGGTGTATCCATGTAGCATTATTGTGTGTTCAAGAAGATCCAGTTGATCGACCAACAATGTCTTCTGTAATTCACATGTTGGCTAATGAAGCTACATCACTTCCACTATTCAAAGAACCTGCATTTTCAACACATAGTAATTATAAGGCTGTTTGCTCTTCTTCTCCATCATCTAGCATTTTTTCGAACAATCTGGTAACCATTAGCATCCCTGAAGGTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

645

Amino Acids

71.96

Weight (kDa)

6.52

Isoelectric Point (pI)

47.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 40 - 207 4.5e-38 SPARK
Pkinase PF00069 328 - 596 3.9e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 330 - 598 4.5e-52 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1026, 1857
Acc36I ACCTGC 1 cut(s) 1840
AccBSI CCGCTC 1 cut(s) 95
AciI CCGC 3 cut(s) 93, 554, 1587
AclWI GGATC 4 cut(s) 226, 1235, 1362, 1745
AcsI RAATTY 8 cut(s) 44, 331, 567, 760, 898, 1229, 1401, 1582
AcuI CTGAAG 2 cut(s) 1005, 1467
AfaI GTAC 3 cut(s) 1205, 1311, 1456
AfiI CCNNNNNNNGG 3 cut(s) 217, 465, 466
AflII CTTAAG 1 cut(s) 943
AflIII ACRYGT 3 cut(s) 1485, 1691, 1788
AgeI ACCGGT 1 cut(s) 937
AgsI TTSAA 9 cut(s) 35, 169, 721, 1175, 1339, 1604, 1745, 1825, 1842
AjuI GAANNNNNNNTTGG 4 cut(s) 845, 877, 1759, 1791
AleI CACNNNNGTG 2 cut(s) 731, 755
Alw26I GTCTC 4 cut(s) 261, 397, 475, 808
AlwI GGATC 4 cut(s) 226, 1235, 1362, 1745
AlwNI CAGNNNCTG 1 cut(s) 650
AoxI GGCC 4 cut(s) 271, 291, 559, 1015
ApeKI GCWGC 4 cut(s) 323, 644, 647, 965
ApoI RAATTY 8 cut(s) 44, 331, 567, 760, 898, 1229, 1401, 1582
AseI ATTAAT 3 cut(s) 581, 635, 1193
AsiGI ACCGGT 1 cut(s) 937
AspLEI GCGC 1 cut(s) 443
AspS9I GGNCC 2 cut(s) 406, 1016
AsuC2I CCSGG 1 cut(s) 1352
AsuHPI GGTGA 6 cut(s) 217, 355, 577, 1340, 1482, 1678
AsuII TTCGAA 1 cut(s) 1898
AvaII GGWCC 1 cut(s) 406
BanII GRGCYC 1 cut(s) 199
BbsI GAAGAC 2 cut(s) 447, 1767
BbvI GCAGC 4 cut(s) 335, 656, 659, 952
BccI CCATC 3 cut(s) 587, 1620, 1888
BciVI GTATCC 1 cut(s) 1730
BclI TGATCA 1 cut(s) 481
BcnI CCSGG 1 cut(s) 1352
BcoDI GTCTC 4 cut(s) 261, 397, 475, 808
BfaI CTAG 5 cut(s) 426, 612, 998, 1332, 1887
BfmI CTRYAG 1 cut(s) 795
BfrI CTTAAG 1 cut(s) 943
BfuAI ACCTGC 1 cut(s) 1840
BfuI GTATCC 1 cut(s) 1730
BisI GCNGC 5 cut(s) 324, 555, 645, 648, 966
BlsI GCNGC 5 cut(s) 325, 556, 646, 649, 967
BmcAI AGTACT 1 cut(s) 1311
Bme1390I CCNGG 1 cut(s) 1352
Bme18I GGWCC 1 cut(s) 406
BmgT120I GGNCC 2 cut(s) 406, 1016
BmiI GGNNCC 1 cut(s) 408
BmrFI CCNGG 1 cut(s) 1352
BmsI GCATC 5 cut(s) 532, 1041, 1663, 1685, 1929
BpiI GAAGAC 2 cut(s) 447, 1767
BpmI CTGGAG 2 cut(s) 930, 1580
Bpu14I TTCGAA 1 cut(s) 1898
BpuEI CTTGAG 2 cut(s) 272, 1287
BpuMI CCSGG 1 cut(s) 1352
BsaBI GATNNNNATC 1 cut(s) 1193
BsaI GGTCTC 1 cut(s) 475
BsaJI CCNNGG 1 cut(s) 1244
BsaWI WCCGGW 1 cut(s) 937
Bsc4I CCNNNNNNNGG 3 cut(s) 217, 465, 466
Bse118I RCCGGY 1 cut(s) 937
Bse1I ACTGG 2 cut(s) 352, 1754
Bse8I GATNNNNATC 1 cut(s) 1193
BseDI CCNNGG 1 cut(s) 1244
BseGI GGATG 4 cut(s) 533, 1387, 1631, 1920
BseJI GATNNNNATC 1 cut(s) 1193
BseLI CCNNNNNNNGG 3 cut(s) 217, 465, 466
BseMII CTCAG 3 cut(s) 819, 1485, 1512
BseNI ACTGG 2 cut(s) 352, 1754
BseRI GAGGAG 1 cut(s) 163
BseXI GCAGC 4 cut(s) 335, 656, 659, 952
BshFI GGCC 4 cut(s) 273, 293, 561, 1017
BshTI ACCGGT 1 cut(s) 937
BsiSI CCGG 2 cut(s) 938, 1351
BslFI GGGAC 2 cut(s) 146, 1486
BslI CCNNNNNNNGG 3 cut(s) 217, 465, 466
BsmAI GTCTC 4 cut(s) 261, 397, 475, 808
BsmFI GGGAC 2 cut(s) 146, 1486
BsnI GGCC 4 cut(s) 273, 293, 561, 1017
Bso31I GGTCTC 1 cut(s) 475
Bsp119I TTCGAA 1 cut(s) 1898
Bsp1286I GDGCHC 1 cut(s) 199
Bsp143I GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
BspACI CCGC 3 cut(s) 93, 554, 1587
BspANI GGCC 4 cut(s) 273, 293, 561, 1017
BspCNI CTCAG 3 cut(s) 818, 1486, 1513
BspHI TCATGA 2 cut(s) 39, 1104
BspLI GGNNCC 1 cut(s) 408
BspMAI CTGCAG 1 cut(s) 799
BspMI ACCTGC 1 cut(s) 1840
BspPI GGATC 4 cut(s) 226, 1235, 1362, 1745
BspQI GCTCTTC 1 cut(s) 1876
BspT104I TTCGAA 1 cut(s) 1898
BspTI CTTAAG 1 cut(s) 943
BspTNI GGTCTC 1 cut(s) 475
BsrBI CCGCTC 1 cut(s) 95
BsrFI RCCGGY 1 cut(s) 937
BsrI ACTGG 2 cut(s) 352, 1754
BssAI RCCGGY 1 cut(s) 937
BssECI CCNNGG 1 cut(s) 1244
BssMI GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
BssT1I CCWWGG 1 cut(s) 1244
Bst4CI ACNGT 4 cut(s) 589, 602, 1071, 1481
Bst6I CTCTTC 1 cut(s) 1876
BstAFI CTTAAG 1 cut(s) 943
BstBI TTCGAA 1 cut(s) 1898
BstC8I GCNNGC 4 cut(s) 508, 547, 559, 1504
BstDEI CTNAG 5 cut(s) 474, 563, 805, 1494, 1521
BstEII GGTNACC 2 cut(s) 686, 1909
BstF5I GGATG 4 cut(s) 533, 1387, 1631, 1920
BstHHI GCGC 1 cut(s) 443
BstKTI GATC 7 cut(s) 142, 234, 484, 1243, 1357, 1753, 1762
BstMAI GTCTC 4 cut(s) 261, 397, 475, 808
BstMBI GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
BstMWI GCNNNNNNNGC 4 cut(s) 512, 551, 1628, 1802
BstNSI RCATGY 4 cut(s) 132, 510, 1489, 1792
BstPI GGTNACC 2 cut(s) 686, 1909
BstSCI CCNGG 1 cut(s) 1350
BstSFI CTRYAG 1 cut(s) 795
BstV1I GCAGC 4 cut(s) 335, 656, 659, 952
BstV2I GAAGAC 2 cut(s) 447, 1767
BstX2I RGATCY 3 cut(s) 231, 1354, 1750
BstYI RGATCY 3 cut(s) 231, 1354, 1750
BsuI GTATCC 1 cut(s) 1730
BsuRI GGCC 4 cut(s) 273, 293, 561, 1017
BtsCI GGATG 4 cut(s) 533, 1387, 1631, 1920
BtsI GCAGTG 1 cut(s) 738
BtsIMutI CAGTG 3 cut(s) 522, 738, 1686
BveI ACCTGC 1 cut(s) 1840
Cac8I GCNNGC 4 cut(s) 508, 547, 559, 1504
CaiI CAGNNNCTG 1 cut(s) 650
CciI TCATGA 2 cut(s) 39, 1104
CfoI GCGC 1 cut(s) 443
Cfr10I RCCGGY 1 cut(s) 937
Cfr13I GGNCC 2 cut(s) 406, 1016
Csp6I GTAC 3 cut(s) 1204, 1310, 1455
CspAI ACCGGT 1 cut(s) 937
CspCI CAANNNNNGTGG 2 cut(s) 478, 513
CviQI GTAC 3 cut(s) 1204, 1310, 1455
DdeI CTNAG 5 cut(s) 474, 563, 805, 1494, 1521
DpnI GATC 7 cut(s) 141, 233, 483, 1242, 1356, 1752, 1761
DpnII GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
Eam1104I CTCTTC 1 cut(s) 1876
EarI CTCTTC 1 cut(s) 1876
Eco130I CCWWGG 1 cut(s) 1244
Eco147I AGGCCT 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 1 cut(s) 475
Eco32I GATATC 1 cut(s) 1094
Eco47I GGWCC 1 cut(s) 406
Eco57I CTGAAG 2 cut(s) 1005, 1467
Eco91I GGTNACC 2 cut(s) 686, 1909
EcoO65I GGTNACC 2 cut(s) 686, 1909
EcoRI GAATTC 2 cut(s) 567, 1582
EcoRV GATATC 1 cut(s) 1094
EcoT14I CCWWGG 1 cut(s) 1244
EcoT22I ATGCAT 1 cut(s) 1678
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 1244
FalI AAGNNNNNCTT 4 cut(s) 1019, 1051, 1296, 1328
FaqI GGGAC 2 cut(s) 146, 1486
FbaI TGATCA 1 cut(s) 481
Fnu4HI GCNGC 5 cut(s) 324, 555, 645, 648, 966
FokI GGATG 4 cut(s) 520, 1394, 1638, 1907
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 5 cut(s) 324, 555, 645, 648, 966
FspBI CTAG 5 cut(s) 426, 612, 998, 1332, 1887
GlaI GCGC 1 cut(s) 442
GluI GCNGC 5 cut(s) 324, 555, 645, 648, 966
GsuI CTGGAG 2 cut(s) 930, 1580
HaeIII GGCC 4 cut(s) 273, 293, 561, 1017
HapII CCGG 2 cut(s) 938, 1351
HhaI GCGC 1 cut(s) 443
Hin6I GCGC 1 cut(s) 441
HinP1I GCGC 1 cut(s) 441
HindIII AAGCTT 2 cut(s) 476, 1707
HinfI GANTC 4 cut(s) 159, 452, 500, 665
HpaII CCGG 2 cut(s) 938, 1351
HphI GGTGA 6 cut(s) 217, 355, 577, 1340, 1482, 1678
Hpy166II GTNNAC 2 cut(s) 736, 1274
Hpy8I GTNNAC 2 cut(s) 736, 1274
HpyAV CCTTC 7 cut(s) 175, 209, 390, 1286, 1569, 1643, 1922
HpyCH4III ACNGT 4 cut(s) 589, 602, 1071, 1481
HpyCH4IV ACGT 2 cut(s) 1533, 1691
HpyCH4V TGCA 9 cut(s) 183, 266, 506, 510, 644, 797, 1502, 1676, 1835
HpyF10VI GCNNNNNNNGC 4 cut(s) 512, 551, 1628, 1802
HpyF3I CTNAG 5 cut(s) 474, 563, 805, 1494, 1521
HpySE526I ACGT 2 cut(s) 1533, 1691
HspAI GCGC 1 cut(s) 441
Ksp22I TGATCA 1 cut(s) 481
Kzo9I GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
LguI GCTCTTC 1 cut(s) 1876
LmnI GCTCC 1 cut(s) 1137
Lsp1109I GCAGC 4 cut(s) 335, 656, 659, 952
LweI GCATC 5 cut(s) 532, 1041, 1663, 1685, 1929
MaeI CTAG 5 cut(s) 426, 612, 998, 1332, 1887
MaeII ACGT 2 cut(s) 1533, 1691
MaeIII GTNAC 7 cut(s) 421, 596, 686, 790, 1481, 1488, 1909
MalI GATC 7 cut(s) 141, 233, 483, 1242, 1356, 1752, 1761
MbiI CCGCTC 1 cut(s) 95
MboI GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
MflI RGATCY 3 cut(s) 231, 1354, 1750
MhlI GDGCHC 1 cut(s) 199
MlyI GAGTC 4 cut(s) 168, 461, 494, 659
MmeI TCCRAC 3 cut(s) 1159, 1242, 1359
Mph1103I ATGCAT 1 cut(s) 1678
MseI TTAA 7 cut(s) 581, 635, 944, 950, 1115, 1193, 1712
MslI CAYNNNNRTG 4 cut(s) 635, 731, 755, 1735
MspA1I CMGCKG 1 cut(s) 650
MspCI CTTAAG 1 cut(s) 943
MspI CCGG 2 cut(s) 938, 1351
MspR9I CCNGG 1 cut(s) 1352
MwoI GCNNNNNNNGC 4 cut(s) 512, 551, 1628, 1802
NciI CCSGG 1 cut(s) 1352
NdeII GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
NlaIV GGNNCC 1 cut(s) 408
NmuCI GTSAC 1 cut(s) 1488
NsiI ATGCAT 1 cut(s) 1678
NspI RCATGY 4 cut(s) 132, 510, 1489, 1792
NspV TTCGAA 1 cut(s) 1898
OliI CACNNNNGTG 2 cut(s) 731, 755
PaeI GCATGC 1 cut(s) 510
PagI TCATGA 2 cut(s) 39, 1104
PceI AGGCCT 1 cut(s) 273
PciI ACATGT 2 cut(s) 1485, 1788
PciSI GCTCTTC 1 cut(s) 1876
PinAI ACCGGT 1 cut(s) 937
PkrI GCNGC 5 cut(s) 325, 556, 646, 649, 967
PleI GAGTC 4 cut(s) 167, 460, 494, 659
PpsI GAGTC 4 cut(s) 167, 460, 494, 659
PscI ACATGT 2 cut(s) 1485, 1788
PshBI ATTAAT 3 cut(s) 581, 635, 1193
PsiI TTATAA 2 cut(s) 1026, 1857
PspEI GGTNACC 2 cut(s) 686, 1909
PspN4I GGNNCC 1 cut(s) 408
PspPI GGNCC 2 cut(s) 406, 1016
PsrI GAACNNNNNNTAC 2 cut(s) 1356, 1388
PstI CTGCAG 1 cut(s) 799
PstNI CAGNNNCTG 1 cut(s) 650
PsuI RGATCY 3 cut(s) 231, 1354, 1750
PvuII CAGCTG 1 cut(s) 650
RsaI GTAC 3 cut(s) 1205, 1311, 1456
RsaNI GTAC 3 cut(s) 1204, 1310, 1455
RseI CAYNNNNRTG 4 cut(s) 635, 731, 755, 1735
SapI GCTCTTC 1 cut(s) 1876
SaqAI TTAA 7 cut(s) 581, 635, 944, 950, 1115, 1193, 1712
SatI GCNGC 5 cut(s) 324, 555, 645, 648, 966
Sau3AI GATC 7 cut(s) 139, 231, 481, 1240, 1354, 1750, 1759
Sau96I GGNCC 2 cut(s) 406, 1016
ScaI AGTACT 1 cut(s) 1311
SchI GAGTC 4 cut(s) 168, 461, 494, 659
ScrFI CCNGG 1 cut(s) 1352
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 5 cut(s) 532, 1041, 1663, 1685, 1929
SfcI CTRYAG 1 cut(s) 795
SfuI TTCGAA 1 cut(s) 1898
SinI GGWCC 1 cut(s) 406
SmiMI CAYNNNNRTG 4 cut(s) 635, 731, 755, 1735
SmlI CTYRAG 3 cut(s) 287, 943, 1302
SmoI CTYRAG 3 cut(s) 287, 943, 1302
SphI GCATGC 1 cut(s) 510
SseBI AGGCCT 1 cut(s) 273
SsiI CCGC 3 cut(s) 93, 554, 1587
SspI AATATT 1 cut(s) 892
SspMI CTAG 5 cut(s) 426, 612, 998, 1332, 1887
StuI AGGCCT 1 cut(s) 273
StyD4I CCNGG 1 cut(s) 1350
StyI CCWWGG 1 cut(s) 1244
TaaI ACNGT 4 cut(s) 589, 602, 1071, 1481
TaiI ACGT 2 cut(s) 1536, 1694
TaqI TCGA 5 cut(s) 356, 1216, 1431, 1762, 1898
TatI WGTACW 2 cut(s) 1203, 1309
TauI GCSGC 1 cut(s) 557
Tru1I TTAA 7 cut(s) 581, 635, 944, 950, 1115, 1193, 1712
Tru9I TTAA 7 cut(s) 581, 635, 944, 950, 1115, 1193, 1712
TscAI CASTG 3 cut(s) 529, 745, 1686
TseFI GTSAC 1 cut(s) 1488
TseI GCWGC 4 cut(s) 323, 644, 647, 965
Tsp45I GTSAC 1 cut(s) 1488
TspDTI ATGAA 8 cut(s) 37, 56, 1093, 1121, 1398, 1406, 1719, 1815
TspRI CASTG 3 cut(s) 529, 745, 1686
Vha464I CTTAAG 1 cut(s) 943
VpaK11BI GGWCC 1 cut(s) 406
VspI ATTAAT 3 cut(s) 581, 635, 1193
XapI RAATTY 8 cut(s) 44, 331, 567, 760, 898, 1229, 1401, 1582
XbaI TCTAGA 2 cut(s) 611, 1331
XceI RCATGY 4 cut(s) 132, 510, 1489, 1792
XspI CTAG 5 cut(s) 426, 612, 998, 1332, 1887
ZrmI AGTACT 1 cut(s) 1311
Zsp2I ATGCAT 1 cut(s) 1678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.