Rh2AG547500

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000114
Physical Location & Seq
Reverse (-)
77695959 .. 77702881
6923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG547500.1

Sequence Viewer

Length: 1290 bp
ATGGGGTGGCTCTTGTGTTACCTTGTAACACTGCTCGTATCTCATATCCTGTCATTCGGTACCTGCCAAGACAAAATAGTACCAGGACAGTATATCAGTGATAACCACACTTTGGTTTCCTCCTTTGGGACCTTTTCATTAGGCTTCTTCAATCCTAATGAAAATTCTCCCAAATACTTCCTTGGTATACGATTCAACAAATTCCCAAATACTGCATCAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGCGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAATGCATCAGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGATGATACCGGAAACCTTATTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTGTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAAAGACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTCGGCATAGATCCTAAAGTACCAATTCAGGCCTTTATCTGGAAGGAAACTACTCCAATAGCGAGAACTGCTGTGTACATTGGCAAGGATACAAGAACAGAGTTTCAAAATCCATGTGGAACCGCGATTTTCCTTTCACACAACTTTGATGTTGATGATGTTTATCTTGCTTTCAGTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCTGCAGGGCTACTTAAACTGCAGTTCTGGCAGAATTCTAGTAAAACGTGGTTGGAACAAGGGAATTCACTACCCGTTGATAACTGTAGTTTTTATGCTTATTGCGGCCCCAATAGTGCCTGTCGTAGTGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGCAATCGACGGTGGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGCGGTAATGGCATACAAGATAACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTATTAAACAATAGGAGTATGAATGAGTGTGAATCTGAATGTCGGCGGAAATGTTCTTGCACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACATGCTTGGCATGGTTTGGCAAATTACTGGATCTAGTAGAGAATTTCAACCGATCTCTTCATGATATCTATATTCGTGTTCATGGCTCCGAACTAGAACATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

429

Amino Acids

47.75

Weight (kDa)

6.01

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 173 5.3e-31 D-mannose binding lectin
S_locus_glycop PF00954 234 - 317 3e-15 S-locus glycoprotein domain
PAN_2 PF08276 342 - 406 2.8e-15 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 71
Acc65I GGTACC 1 cut(s) 59
AccB1I GGYRCC 2 cut(s) 59, 504
AccB7I CCANNNNNTGG 1 cut(s) 112
AccI GTMKAC 1 cut(s) 187
AccII CGCG 1 cut(s) 680
AciI CCGC 5 cut(s) 678, 876, 956, 1014, 1123
AclWI GGATC 7 cut(s) 309, 527, 560, 764, 777, 1074, 1221
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 5 cut(s) 163, 200, 805, 835, 1225
AcyI GRCGYC 1 cut(s) 505
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 4 cut(s) 61, 81, 576, 632
AfiI CCNNNNNNNGG 4 cut(s) 112, 126, 542, 594
AgsI TTSAA 8 cut(s) 151, 196, 410, 481, 662, 1041, 1049, 1231
AjnI CCWGG 3 cut(s) 82, 460, 515
AluBI AGCT 7 cut(s) 230, 405, 432, 477, 744, 1045, 1142
AluI AGCT 7 cut(s) 230, 405, 432, 477, 744, 1045, 1142
Alw26I GTCTC 1 cut(s) 739
AlwI GGATC 7 cut(s) 309, 527, 560, 764, 777, 1074, 1221
AlwNI CAGNNNCTG 2 cut(s) 344, 987
AoxI GGCC 3 cut(s) 493, 585, 877
ApeKI GCWGC 3 cut(s) 276, 521, 987
ApoI RAATTY 5 cut(s) 163, 200, 805, 835, 1225
Asp718I GGTACC 1 cut(s) 59
AspLEI GCGC 2 cut(s) 507, 526
AspS9I GGNCC 3 cut(s) 129, 878, 978
AsuC2I CCSGG 2 cut(s) 258, 543
AsuHPI GGTGA 4 cut(s) 544, 909, 914, 1066
AvaII GGWCC 2 cut(s) 129, 978
BalI TGGCCA 1 cut(s) 495
BamHI GGATCC 1 cut(s) 769
BanI GGYRCC 2 cut(s) 59, 504
BbvI GCAGC 3 cut(s) 288, 508, 974
BccI CCATC 2 cut(s) 275, 1160
BciT130I CCWGG 3 cut(s) 84, 462, 517
BciVI GTATCC 1 cut(s) 637
BcnI CCSGG 2 cut(s) 258, 543
BcoDI GTCTC 1 cut(s) 739
BfaI CTAG 5 cut(s) 309, 377, 810, 1217, 1277
BfmI CTRYAG 3 cut(s) 774, 791, 856
BfoI RGCGCY 1 cut(s) 508
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 1 cut(s) 637
BisI GCNGC 4 cut(s) 277, 522, 877, 988
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 4 cut(s) 278, 523, 878, 989
Bme1390I CCNGG 5 cut(s) 84, 258, 462, 517, 543
Bme18I GGWCC 2 cut(s) 129, 978
BmgT120I GGNCC 3 cut(s) 129, 878, 978
BmiI GGNNCC 7 cut(s) 61, 130, 506, 676, 771, 880, 1270
BmrFI CCNGG 5 cut(s) 84, 258, 462, 517, 543
BmsI GCATC 2 cut(s) 224, 344
Bpu1102I GCTNAGC 1 cut(s) 272
BpuMI CCSGG 2 cut(s) 258, 543
BsaBI GATNNNNATC 2 cut(s) 285, 717
BsaHI GRCGYC 1 cut(s) 505
BsaJI CCNNGG 2 cut(s) 181, 516
BsaWI WCCGGW 1 cut(s) 386
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 126, 542, 594
Bse1I ACTGG 5 cut(s) 373, 496, 940, 981, 1215
Bse3DI GCAATG 1 cut(s) 360
Bse8I GATNNNNATC 2 cut(s) 285, 717
BseBI CCWGG 3 cut(s) 84, 462, 517
BseDI CCNNGG 2 cut(s) 181, 516
BseGI GGATG 2 cut(s) 439, 512
BseJI GATNNNNATC 2 cut(s) 285, 717
BseLI CCNNNNNNNGG 4 cut(s) 112, 126, 542, 594
BseMI GCAATG 1 cut(s) 360
BseMII CTCAG 3 cut(s) 286, 392, 759
BseNI ACTGG 5 cut(s) 373, 496, 940, 981, 1215
BseXI GCAGC 3 cut(s) 288, 508, 974
Bsh1236I CGCG 1 cut(s) 680
BshFI GGCC 3 cut(s) 495, 587, 879
BshNI GGYRCC 2 cut(s) 59, 504
BsiSI CCGG 4 cut(s) 257, 387, 543, 1064
BslFI GGGAC 2 cut(s) 142, 1195
BslI CCNNNNNNNGG 4 cut(s) 112, 126, 542, 594
BsmAI GTCTC 1 cut(s) 739
BsmFI GGGAC 2 cut(s) 142, 1195
BsnI GGCC 3 cut(s) 495, 587, 879
Bsp1407I TGTACA 1 cut(s) 630
Bsp143I GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 5 cut(s) 678, 876, 956, 1014, 1123
BspANI GGCC 3 cut(s) 495, 587, 879
BspCNI CTCAG 3 cut(s) 285, 393, 758
BspFNI CGCG 1 cut(s) 680
BspHI TCATGA 1 cut(s) 1243
BspLI GGNNCC 7 cut(s) 61, 130, 506, 676, 771, 880, 1270
BspMAI CTGCAG 2 cut(s) 778, 795
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 7 cut(s) 309, 527, 560, 764, 777, 1074, 1221
BspT107I GGYRCC 2 cut(s) 59, 504
BsrDI GCAATG 1 cut(s) 360
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 5 cut(s) 373, 496, 940, 981, 1215
BssECI CCNNGG 2 cut(s) 181, 516
BssMI GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
BssNAI GTATAC 1 cut(s) 188
BssNI GRCGYC 1 cut(s) 505
BssT1I CCWWGG 1 cut(s) 181
Bst1107I GTATAC 1 cut(s) 188
Bst2UI CCWGG 3 cut(s) 84, 462, 517
Bst4CI ACNGT 3 cut(s) 90, 857, 967
Bst6I CTCTTC 1 cut(s) 1245
BstACI GRCGYC 1 cut(s) 505
BstAUI TGTACA 1 cut(s) 630
BstDEI CTNAG 3 cut(s) 272, 401, 745
BstF5I GGATG 2 cut(s) 439, 512
BstFNI CGCG 1 cut(s) 680
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 2 cut(s) 507, 526
BstKTI GATC 8 cut(s) 304, 439, 535, 568, 772, 1069, 1216, 1238
BstMAI GTCTC 1 cut(s) 739
BstMBI GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
BstMWI GCNNNNNNNGC 3 cut(s) 623, 799, 1020
BstNI CCWGG 3 cut(s) 84, 462, 517
BstNSI RCATGY 2 cut(s) 1014, 1188
BstSCI CCNGG 5 cut(s) 82, 256, 460, 515, 541
BstSFI CTRYAG 3 cut(s) 774, 791, 856
BstUI CGCG 1 cut(s) 680
BstV1I GCAGC 3 cut(s) 288, 508, 974
BstX2I RGATCY 3 cut(s) 565, 769, 1213
BstYI RGATCY 3 cut(s) 565, 769, 1213
BstZ17I GTATAC 1 cut(s) 188
BsuI GTATCC 1 cut(s) 637
BsuRI GGCC 3 cut(s) 495, 587, 879
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 2 cut(s) 439, 512
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 4 cut(s) 29, 103, 736, 988
BveI ACCTGC 1 cut(s) 71
CaiI CAGNNNCTG 2 cut(s) 344, 987
CciI TCATGA 1 cut(s) 1243
CfoI GCGC 2 cut(s) 507, 526
Cfr13I GGNCC 3 cut(s) 129, 878, 978
Csp6I GTAC 4 cut(s) 60, 80, 575, 631
CviAII CATG 8 cut(s) 669, 921, 1011, 1185, 1194, 1244, 1265, 1283
CviQI GTAC 4 cut(s) 60, 80, 575, 631
DdeI CTNAG 3 cut(s) 272, 401, 745
DinI GGCGCC 1 cut(s) 506
DpnI GATC 8 cut(s) 303, 438, 534, 567, 771, 1068, 1215, 1237
DpnII GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
DraIII CACNNNGTG 1 cut(s) 423
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 1 cut(s) 1245
EarI CTCTTC 1 cut(s) 1245
EciI GGCGGA 1 cut(s) 1138
Eco130I CCWWGG 1 cut(s) 181
Eco147I AGGCCT 1 cut(s) 587
Eco32I GATATC 1 cut(s) 1249
Eco47I GGWCC 2 cut(s) 129, 978
EcoO109I RGGNCCY 1 cut(s) 129
EcoRI GAATTC 2 cut(s) 805, 835
EcoRII CCWGG 3 cut(s) 82, 460, 515
EcoRV GATATC 1 cut(s) 1249
EcoT14I CCWWGG 1 cut(s) 181
EcoT22I ATGCAT 1 cut(s) 337
EgeI GGCGCC 1 cut(s) 506
EheI GGCGCC 1 cut(s) 506
ErhI CCWWGG 1 cut(s) 181
FaeI CATG 8 cut(s) 672, 924, 1014, 1188, 1197, 1247, 1268, 1286
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 539, 571
FaqI GGGAC 2 cut(s) 142, 1195
FatI CATG 8 cut(s) 668, 920, 1010, 1184, 1193, 1243, 1264, 1282
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 4 cut(s) 277, 522, 877, 988
FokI GGATG 2 cut(s) 426, 499
Fsp4HI GCNGC 4 cut(s) 277, 522, 877, 988
FspBI CTAG 5 cut(s) 309, 377, 810, 1217, 1277
GlaI GCGC 2 cut(s) 506, 525
GluI GCNGC 4 cut(s) 277, 522, 877, 988
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 3 cut(s) 495, 587, 879
HapII CCGG 4 cut(s) 257, 387, 543, 1064
HhaI GCGC 2 cut(s) 507, 526
Hin1I GRCGYC 1 cut(s) 505
Hin1II CATG 8 cut(s) 672, 924, 1014, 1188, 1197, 1247, 1268, 1286
Hin6I GCGC 2 cut(s) 505, 524
HinP1I GCGC 2 cut(s) 505, 524
HincII GTYRAC 2 cut(s) 327, 1008
HindII GTYRAC 2 cut(s) 327, 1008
HindIII AAGCTT 1 cut(s) 1043
HinfI GANTC 5 cut(s) 192, 239, 251, 358, 1109
HpaII CCGG 4 cut(s) 257, 387, 543, 1064
HphI GGTGA 4 cut(s) 544, 909, 914, 1066
Hpy166II GTNNAC 6 cut(s) 188, 327, 552, 631, 905, 1008
Hpy188I TCNGA 5 cut(s) 306, 402, 739, 1114, 1273
Hpy188III TCNNGA 2 cut(s) 595, 1244
Hpy8I GTNNAC 6 cut(s) 188, 327, 552, 631, 905, 1008
Hpy99I CGWCG 1 cut(s) 967
HpyAV CCTTC 2 cut(s) 565, 592
HpyCH4III ACNGT 3 cut(s) 90, 857, 967
HpyCH4IV ACGT 1 cut(s) 818
HpyCH4V TGCA 8 cut(s) 215, 335, 353, 776, 793, 924, 990, 1137
HpyF10VI GCNNNNNNNGC 3 cut(s) 623, 799, 1020
HpyF3I CTNAG 3 cut(s) 272, 401, 745
HpySE526I ACGT 1 cut(s) 818
Hsp92I GRCGYC 1 cut(s) 505
Hsp92II CATG 8 cut(s) 672, 924, 1014, 1188, 1197, 1247, 1268, 1286
HspAI GCGC 2 cut(s) 505, 524
KasI GGCGCC 1 cut(s) 504
KpnI GGTACC 1 cut(s) 63
Kzo9I GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
LmnI GCTCC 1 cut(s) 1274
Lsp1109I GCAGC 3 cut(s) 288, 508, 974
LweI GCATC 2 cut(s) 224, 344
MaeI CTAG 5 cut(s) 309, 377, 810, 1217, 1277
MaeII ACGT 1 cut(s) 818
MaeIII GTNAC 3 cut(s) 17, 25, 415
MalI GATC 8 cut(s) 303, 438, 534, 567, 771, 1068, 1215, 1237
MboI GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
MboII GAAGA 3 cut(s) 139, 422, 1232
MflI RGATCY 3 cut(s) 565, 769, 1213
MlsI TGGCCA 1 cut(s) 495
MluCI AATT 8 cut(s) 163, 200, 579, 752, 805, 835, 1205, 1225
MluNI TGGCCA 1 cut(s) 495
Mly113I GGCGCC 1 cut(s) 505
MmeI TCCRAC 3 cut(s) 279, 747, 804
MnlI CCTC 2 cut(s) 130, 750
Mox20I TGGCCA 1 cut(s) 495
Mph1103I ATGCAT 1 cut(s) 337
MscI TGGCCA 1 cut(s) 495
MseI TTAA 3 cut(s) 468, 786, 1082
MslI CAYNNNNRTG 4 cut(s) 220, 444, 919, 925
Msp20I TGGCCA 1 cut(s) 495
MspI CCGG 4 cut(s) 257, 387, 543, 1064
MspR9I CCNGG 5 cut(s) 84, 258, 462, 517, 543
MvaI CCWGG 3 cut(s) 84, 462, 517
MvnI CGCG 1 cut(s) 680
MwoI GCNNNNNNNGC 3 cut(s) 623, 799, 1020
NarI GGCGCC 1 cut(s) 505
NciI CCSGG 2 cut(s) 258, 543
NdeII GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
NlaIII CATG 8 cut(s) 672, 924, 1014, 1188, 1197, 1247, 1268, 1286
NlaIV GGNNCC 7 cut(s) 61, 130, 506, 676, 771, 880, 1270
NmuCI GTSAC 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 2 cut(s) 1014, 1188
PagI TCATGA 1 cut(s) 1243
PceI AGGCCT 1 cut(s) 587
PfeI GAWTC 5 cut(s) 192, 239, 251, 358, 1109
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 4 cut(s) 278, 523, 878, 989
PluTI GGCGCC 1 cut(s) 508
PpuMI RGGWCCY 1 cut(s) 129
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 3 cut(s) 82, 460, 515
PspGI CCWGG 3 cut(s) 82, 460, 515
PspN4I GGNNCC 7 cut(s) 61, 130, 506, 676, 771, 880, 1270
PspPI GGNCC 3 cut(s) 129, 878, 978
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 2 cut(s) 778, 795
PstNI CAGNNNCTG 2 cut(s) 344, 987
PsuI RGATCY 3 cut(s) 565, 769, 1213
RsaI GTAC 4 cut(s) 61, 81, 576, 632
RsaNI GTAC 4 cut(s) 60, 80, 575, 631
RseI CAYNNNNRTG 4 cut(s) 220, 444, 919, 925
SaqAI TTAA 3 cut(s) 468, 786, 1082
SatI GCNGC 4 cut(s) 277, 522, 877, 988
Sau3AI GATC 8 cut(s) 301, 436, 532, 565, 769, 1066, 1213, 1235
Sau96I GGNCC 3 cut(s) 129, 878, 978
SbfI CCTGCAGG 1 cut(s) 778
ScrFI CCNGG 5 cut(s) 84, 258, 462, 517, 543
SdaI CCTGCAGG 1 cut(s) 778
SfaNI GCATC 2 cut(s) 224, 344
SfcI CTRYAG 3 cut(s) 774, 791, 856
SfoI GGCGCC 1 cut(s) 506
SinI GGWCC 2 cut(s) 129, 978
SmiMI CAYNNNNRTG 4 cut(s) 220, 444, 919, 925
Sse8387I CCTGCAGG 1 cut(s) 778
Sse9I AATT 8 cut(s) 163, 200, 579, 752, 805, 835, 1205, 1225
SseBI AGGCCT 1 cut(s) 587
SsiI CCGC 5 cut(s) 678, 876, 956, 1014, 1123
SspDI GGCGCC 1 cut(s) 504
SspI AATATT 1 cut(s) 1177
SspMI CTAG 5 cut(s) 309, 377, 810, 1217, 1277
StuI AGGCCT 1 cut(s) 587
StyD4I CCNGG 5 cut(s) 82, 256, 460, 515, 541
StyI CCWWGG 1 cut(s) 181
TaaI ACNGT 3 cut(s) 90, 857, 967
TaiI ACGT 1 cut(s) 821
TaqI TCGA 2 cut(s) 435, 962
TasI AATT 8 cut(s) 163, 200, 579, 752, 805, 835, 1205, 1225
TatI WGTACW 1 cut(s) 630
TauI GCSGC 1 cut(s) 879
TfiI GAWTC 5 cut(s) 192, 239, 251, 358, 1109
Tru1I TTAA 3 cut(s) 468, 786, 1082
Tru9I TTAA 3 cut(s) 468, 786, 1082
TscAI CASTG 4 cut(s) 36, 103, 736, 988
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 3 cut(s) 276, 521, 987
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 6 cut(s) 126, 174, 371, 1112, 1232, 1253
TspRI CASTG 4 cut(s) 36, 103, 736, 988
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 2 cut(s) 129, 978
XapI RAATTY 5 cut(s) 163, 200, 805, 835, 1225
XceI RCATGY 2 cut(s) 1014, 1188
XmiI GTMKAC 1 cut(s) 187
XspI CTAG 5 cut(s) 309, 377, 810, 1217, 1277
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.