Rorug04G0016700

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000114
Physical Location & Seq
Reverse (-)
2541055 .. 2542440
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0016700.1

Sequence Viewer

Length: 1386 bp
ATGGCGACAGACATCCCTAAAAAACAAAAGTCCTCCTACGCAGCAGTTCTGACTGAGGTGTCTCCAATCTCCTTTGCCATCGCTGACTTGCCTTCGCCTTTCTTTGAAGATGGTTTGAACTCTATTCGCATCTCTGAAGAACCATTTCTTCGCGGTCTCGAGAGATGCAAAACCAACTTGATTGGTCGCGTTAATTCTCCTGTCAAGACCCCAGACCTTGTACAACAATTGAAGCAACTATGGTCGGGATTAGATCACTGGACTGTGGCACCTCTTGGTAGGGGTTTTTTCATGCTCCAGTTCGAAAACTTAGTTGATATGCAGCTAGTCTGGTCGTCGGGGACAGTACGTCTTAATTCCGGCATGCTACGTTTGATTAAATGGTCACCTGAGTTCTCGCCATCTACATACAGAAATACCTTCGCTCAGGTATGGGTGCGATTTTGGGACTTAGGGTTTGCCTACTGGGATCAACAAACTCTTTTTGAAATTGCATCTGGTATTGGTACGCCCCTTAAACTTGACCCCCGTACCAAGAACCGCACTGTGGGCTTGTTTGCCAGAATTTTAGTGGACGTTGACTTCTCACAGCCTCTTCACGACAAGCTCAGAATCACTAGGGCCAATGGTGAGGTTGTGGTGATTGGAGTTGAGTATGAGTCTGAACCGGATATCTGCACCAGGTGTGGGATAGTTGGCCATGTCGCTGGTACCTGCCGTTCTAAGGCTCCGGACGACACTGTGGCTGCTATCCCAAATGAGCGGGGAAGGTCAACAGAGCGTTCTGATCTGAAGAGAAGGAGGAACAATCGATCACGCAAGTCACAGCACAACTCAAAGCATGGGGGTGCAATAGGGAGACCAGTCAGAGCCAGACAACCTGATGATGTTACGCCAACGACGGCAACCACAGCAGTAATCTTAAGGCACGACGTTGAAGATAGGATGGCTTCATCTGTTTTGAATAATGTGGAAATTTCCACAGCAGCTCCAACTATCACTGCAGTTCCAGCTTTCACAGCTACTCCAATTATGGATGAGCTGGCGATGGCTGCTGTGCCCGTGCAACAAACTGATTCAAGTGATACCGTCCCACCTGGATTTACTCGGATGGAAACGGAATCTGATATCCAACCTGCTAGCTCTACGTCGACTCCCGTGGTTTCTTCAGTTGCTCCACCAATTATTATGGCCGACTGTAATCAAAGAGACTGTCAGATGGGAGTTACAACTGACCTTTTGGAGGAAGGTGAATTCACACCCGTCCTACATAAGAAGTCGAAGAAATTGCTGAAGCAAAATGAGAAAGCAAAAATGAAAATAATCTCCCACAAACCTGCGGGACGAGCTCTACTTCGCAAGGGAGCTAGTCTCAAGCGTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

461

Amino Acids

51.02

Weight (kDa)

9.23

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 54 - 135 2.5e-10 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 193 - 240 1.8e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 58
Acc36I ACCTGC 3 cut(s) 722, 1144, 1345
Acc65I GGTACC 1 cut(s) 710
AccB1I GGYRCC 2 cut(s) 268, 710
AccBSI CCGCTC 1 cut(s) 763
AccI GTMKAC 1 cut(s) 1151
AccII CGCG 2 cut(s) 153, 189
AccIII TCCGGA 1 cut(s) 730
AciI CCGC 4 cut(s) 153, 541, 763, 1340
AclWI GGATC 1 cut(s) 477
AcoI YGGCCR 2 cut(s) 697, 1191
AcsI RAATTY 3 cut(s) 564, 975, 1253
AcuI CTGAAG 4 cut(s) 156, 812, 1152, 1313
AdeI CACNNNGTG 1 cut(s) 684
AfaI GTAC 5 cut(s) 222, 348, 508, 532, 712
AfiI CCNNNNNNNGG 4 cut(s) 547, 687, 724, 1243
AflII CTTAAG 1 cut(s) 922
AgsI TTSAA 7 cut(s) 107, 118, 232, 488, 938, 964, 1080
AhdI GACNNNNNGTC 1 cut(s) 348
AjnI CCWGG 2 cut(s) 680, 1096
AluBI AGCT 9 cut(s) 325, 607, 989, 1013, 1022, 1042, 1143, 1349, 1367
AluI AGCT 9 cut(s) 325, 607, 989, 1013, 1022, 1042, 1143, 1349, 1367
Alw21I GWGCWC 1 cut(s) 1351
Alw26I GTCTC 5 cut(s) 66, 161, 853, 1203, 1376
AlwI GGATC 1 cut(s) 477
Ama87I CYCGRG 1 cut(s) 158
Aor13HI TCCGGA 1 cut(s) 730
AoxI GGCC 3 cut(s) 621, 697, 1191
ApeKI GCWGC 5 cut(s) 41, 322, 746, 986, 1052
ApoI RAATTY 3 cut(s) 564, 975, 1253
ArsI GACNNNNNNTTYG 4 cut(s) 440, 472, 1198, 1230
Asp700I GAANNNNTTC 1 cut(s) 144
Asp718I GGTACC 1 cut(s) 710
AspS9I GGNCC 1 cut(s) 621
AsuHPI GGTGA 4 cut(s) 378, 641, 652, 1262
AsuII TTCGAA 1 cut(s) 303
AsuNHI GCTAGC 1 cut(s) 1139
AvaI CYCGRG 1 cut(s) 158
BaeGI GKGCMC 1 cut(s) 1062
BaeI ACNNNNGTAYC 2 cut(s) 514, 547
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 2 cut(s) 268, 710
BanII GRGCYC 1 cut(s) 1351
Bbv12I GWGCWC 1 cut(s) 1351
BbvI GCAGC 5 cut(s) 53, 334, 733, 998, 1039
BccI CCATC 7 cut(s) 86, 104, 409, 940, 1042, 1105, 1213
BceAI ACGGC 2 cut(s) 702, 918
BcgI CGANNNNNNTGC 2 cut(s) 1270, 1304
BciT130I CCWGG 2 cut(s) 682, 1098
BcoDI GTCTC 5 cut(s) 66, 161, 853, 1203, 1376
BfaI CTAG 4 cut(s) 326, 618, 1140, 1368
BfmI CTRYAG 1 cut(s) 1002
BfrI CTTAAG 1 cut(s) 922
BfuAI ACCTGC 3 cut(s) 722, 1144, 1345
BisI GCNGC 5 cut(s) 42, 323, 747, 987, 1053
BlsI GCNGC 5 cut(s) 43, 324, 748, 988, 1054
Bme1390I CCNGG 2 cut(s) 682, 1098
BmeRI GACNNNNNGTC 1 cut(s) 348
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 1 cut(s) 621
BmiI GGNNCC 3 cut(s) 270, 712, 729
BmrFI CCNGG 2 cut(s) 682, 1098
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 3 cut(s) 138, 155, 503
BmtI GCTAGC 1 cut(s) 1143
BmuI ACTGGG 1 cut(s) 475
BplI GAGNNNNNCTC 1 cut(s) 1356
BpmI CTGGAG 1 cut(s) 281
Bpu10I CCTNAGC 1 cut(s) 426
Bpu14I TTCGAA 1 cut(s) 303
BpuEI CTTGAG 1 cut(s) 1358
Bsa29I ATCGAT 1 cut(s) 811
BsaI GGTCTC 2 cut(s) 161, 853
BsaJI CCNNGG 1 cut(s) 1158
BsaWI WCCGGW 2 cut(s) 667, 730
BsaXI ACNNNNNCTCC 6 cut(s) 973, 1003, 1009, 1039, 1138, 1168
Bsc4I CCNNNNNNNGG 4 cut(s) 547, 687, 724, 1243
Bse1I ACTGG 4 cut(s) 263, 298, 470, 863
BseAI TCCGGA 1 cut(s) 730
BseBI CCWGG 2 cut(s) 682, 1098
BseCI ATCGAT 1 cut(s) 811
BseDI CCNNGG 1 cut(s) 1158
BseGI GGATG 4 cut(s) 12, 951, 1042, 1116
BseLI CCNNNNNNNGG 4 cut(s) 547, 687, 724, 1243
BseMII CTCAG 4 cut(s) 45, 381, 440, 622
BseNI ACTGG 4 cut(s) 263, 298, 470, 863
BseSI GKGCMC 1 cut(s) 1062
BseXI GCAGC 5 cut(s) 53, 334, 733, 998, 1039
BsgI GTGCAG 1 cut(s) 661
Bsh1236I CGCG 2 cut(s) 153, 189
BshFI GGCC 3 cut(s) 623, 699, 1193
BshNI GGYRCC 2 cut(s) 268, 710
BshVI ATCGAT 1 cut(s) 811
BsiHKAI GWGCWC 1 cut(s) 1351
BsiHKCI CYCGRG 1 cut(s) 158
BsiSI CCGG 3 cut(s) 360, 668, 731
BslFI GGGAC 4 cut(s) 355, 461, 1076, 1356
BslI CCNNNNNNNGG 4 cut(s) 547, 687, 724, 1243
BsmAI GTCTC 5 cut(s) 66, 161, 853, 1203, 1376
BsmFI GGGAC 4 cut(s) 355, 461, 1076, 1356
BsnI GGCC 3 cut(s) 623, 699, 1193
Bso31I GGTCTC 2 cut(s) 161, 853
BsoBI CYCGRG 1 cut(s) 158
Bsp119I TTCGAA 1 cut(s) 303
Bsp1286I GDGCHC 2 cut(s) 1062, 1351
Bsp13I TCCGGA 1 cut(s) 730
Bsp1407I TGTACA 1 cut(s) 220
Bsp143I GATC 4 cut(s) 253, 469, 787, 812
BspACI CCGC 4 cut(s) 153, 541, 763, 1340
BspANI GGCC 3 cut(s) 623, 699, 1193
BspCNI CTCAG 4 cut(s) 46, 382, 439, 621
BspDI ATCGAT 1 cut(s) 811
BspEI TCCGGA 1 cut(s) 730
BspFNI CGCG 2 cut(s) 153, 189
BspLI GGNNCC 3 cut(s) 270, 712, 729
BspMAI CTGCAG 1 cut(s) 1006
BspMI ACCTGC 3 cut(s) 722, 1144, 1345
BspOI GCTAGC 1 cut(s) 1143
BspPI GGATC 1 cut(s) 477
BspT104I TTCGAA 1 cut(s) 303
BspT107I GGYRCC 2 cut(s) 268, 710
BspTI CTTAAG 1 cut(s) 922
BspTNI GGTCTC 2 cut(s) 161, 853
BsrBI CCGCTC 1 cut(s) 763
BsrGI TGTACA 1 cut(s) 220
BsrI ACTGG 4 cut(s) 263, 298, 470, 863
BssECI CCNNGG 1 cut(s) 1158
BssMI GATC 4 cut(s) 253, 469, 787, 812
Bst2UI CCWGG 2 cut(s) 682, 1098
Bst4CI ACNGT 7 cut(s) 265, 346, 547, 742, 1090, 1199, 1214
Bst6I CTCTTC 2 cut(s) 600, 788
BstAFI CTTAAG 1 cut(s) 922
BstAUI TGTACA 1 cut(s) 220
BstBI TTCGAA 1 cut(s) 303
BstC8I GCNNGC 3 cut(s) 365, 1044, 1141
BstDEI CTNAG 7 cut(s) 54, 310, 390, 426, 451, 608, 723
BstDSI CCRYGG 1 cut(s) 1158
BstEII GGTNACC 1 cut(s) 384
BstENI CCTNNNNNAGG 1 cut(s) 1241
BstF5I GGATG 4 cut(s) 12, 951, 1042, 1116
BstFNI CGCG 2 cut(s) 153, 189
BstKTI GATC 4 cut(s) 256, 472, 790, 815
BstMAI GTCTC 5 cut(s) 66, 161, 853, 1203, 1376
BstMBI GATC 4 cut(s) 253, 469, 787, 812
BstMWI GCNNNNNNNGC 6 cut(s) 549, 911, 1010, 1019, 1052, 1346
BstNI CCWGG 2 cut(s) 682, 1098
BstNSI RCATGY 1 cut(s) 367
BstPI GGTNACC 1 cut(s) 384
BstSCI CCNGG 2 cut(s) 680, 1096
BstSFI CTRYAG 1 cut(s) 1002
BstSLI GKGCMC 1 cut(s) 1062
BstUI CGCG 2 cut(s) 153, 189
BstV1I GCAGC 5 cut(s) 53, 334, 733, 998, 1039
BstXI CCANNNNNNTGG 1 cut(s) 707
Bsu15I ATCGAT 1 cut(s) 811
BsuRI GGCC 3 cut(s) 623, 699, 1193
BsuTUI ATCGAT 1 cut(s) 811
BtgI CCRYGG 1 cut(s) 1158
BtgZI GCGATG 2 cut(s) 64, 1061
BtsCI GGATG 4 cut(s) 12, 951, 1042, 1116
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 4 cut(s) 256, 543, 738, 999
BveI ACCTGC 3 cut(s) 722, 1144, 1345
Cac8I GCNNGC 3 cut(s) 365, 1044, 1141
Cfr13I GGNCC 1 cut(s) 621
ClaI ATCGAT 1 cut(s) 811
CsiI ACCWGGT 1 cut(s) 680
Csp6I GTAC 5 cut(s) 221, 347, 507, 531, 711
CviAII CATG 4 cut(s) 292, 364, 701, 842
CviQI GTAC 5 cut(s) 221, 347, 507, 531, 711
DdeI CTNAG 7 cut(s) 54, 310, 390, 426, 451, 608, 723
DpnI GATC 4 cut(s) 255, 471, 789, 814
DpnII GATC 4 cut(s) 253, 469, 787, 812
DraIII CACNNNGTG 1 cut(s) 684
DrdI GACNNNNNNGTC 1 cut(s) 58
DriI GACNNNNNGTC 1 cut(s) 348
DseDI GACNNNNNNGTC 1 cut(s) 58
EaeI YGGCCR 2 cut(s) 697, 1191
Eam1104I CTCTTC 2 cut(s) 600, 788
Eam1105I GACNNNNNGTC 1 cut(s) 348
EarI CTCTTC 2 cut(s) 600, 788
Ecl136II GAGCTC 1 cut(s) 1349
Eco24I GRGCYC 1 cut(s) 1351
Eco31I GGTCTC 2 cut(s) 161, 853
Eco32I GATATC 2 cut(s) 673, 1129
Eco53kI GAGCTC 1 cut(s) 1349
Eco57I CTGAAG 4 cut(s) 156, 812, 1152, 1313
Eco88I CYCGRG 1 cut(s) 158
Eco91I GGTNACC 1 cut(s) 384
EcoICRI GAGCTC 1 cut(s) 1349
EcoNI CCTNNNNNAGG 1 cut(s) 1241
EcoO65I GGTNACC 1 cut(s) 384
EcoRI GAATTC 1 cut(s) 1253
EcoRII CCWGG 2 cut(s) 680, 1096
EcoRV GATATC 2 cut(s) 673, 1129
EcoT38I GRGCYC 1 cut(s) 1351
FaeI CATG 4 cut(s) 295, 367, 704, 845
FaqI GGGAC 4 cut(s) 355, 461, 1076, 1356
FatI CATG 4 cut(s) 291, 363, 700, 841
FauI CCCGC 2 cut(s) 756, 1333
FblI GTMKAC 1 cut(s) 1151
Fnu4HI GCNGC 5 cut(s) 42, 323, 747, 987, 1053
FokI GGATG 3 cut(s) 958, 1049, 1123
FriOI GRGCYC 1 cut(s) 1351
Fsp4HI GCNGC 5 cut(s) 42, 323, 747, 987, 1053
FspBI CTAG 4 cut(s) 326, 618, 1140, 1368
GluI GCNGC 5 cut(s) 42, 323, 747, 987, 1053
GsuI CTGGAG 1 cut(s) 281
HaeIII GGCC 3 cut(s) 623, 699, 1193
HapII CCGG 3 cut(s) 360, 668, 731
Hin1II CATG 4 cut(s) 295, 367, 704, 845
HincII GTYRAC 3 cut(s) 580, 774, 1152
HindII GTYRAC 3 cut(s) 580, 774, 1152
HinfI GANTC 5 cut(s) 612, 659, 1076, 1121, 1153
HpaII CCGG 3 cut(s) 360, 668, 731
HphI GGTGA 4 cut(s) 378, 641, 652, 1262
Hpy166II GTNNAC 4 cut(s) 574, 580, 774, 1152
Hpy188III TCNNGA 6 cut(s) 158, 160, 205, 246, 599, 731
Hpy8I GTNNAC 4 cut(s) 574, 580, 774, 1152
Hpy99I CGWCG 4 cut(s) 340, 904, 935, 1153
HpyAV CCTTC 5 cut(s) 102, 430, 762, 792, 1241
HpyCH4III ACNGT 7 cut(s) 265, 346, 547, 742, 1090, 1199, 1214
HpyCH4IV ACGT 5 cut(s) 349, 370, 576, 933, 1148
HpyCH4V TGCA 7 cut(s) 168, 322, 494, 678, 851, 1004, 1066
HpyF10VI GCNNNNNNNGC 6 cut(s) 549, 911, 1010, 1019, 1052, 1346
HpyF3I CTNAG 7 cut(s) 54, 310, 390, 426, 451, 608, 723
HpySE526I ACGT 5 cut(s) 349, 370, 576, 933, 1148
Hsp92II CATG 4 cut(s) 295, 367, 704, 845
Kpn2I TCCGGA 1 cut(s) 730
KpnI GGTACC 1 cut(s) 714
Kzo9I GATC 4 cut(s) 253, 469, 787, 812
LmnI GCTCC 5 cut(s) 300, 733, 994, 1180, 1364
Lsp1109I GCAGC 5 cut(s) 53, 334, 733, 998, 1039
LweI GCATC 3 cut(s) 138, 155, 503
MabI ACCWGGT 1 cut(s) 680
MaeI CTAG 4 cut(s) 326, 618, 1140, 1368
MaeII ACGT 5 cut(s) 349, 370, 576, 933, 1148
MaeIII GTNAC 4 cut(s) 384, 822, 889, 1225
MalI GATC 4 cut(s) 255, 471, 789, 814
MbiI CCGCTC 1 cut(s) 763
MboI GATC 4 cut(s) 253, 469, 787, 812
MboII GAAGA 8 cut(s) 119, 140, 149, 587, 805, 950, 1158, 1294
MfeI CAATTG 1 cut(s) 227
MhlI GDGCHC 2 cut(s) 1062, 1351
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 2 cut(s) 668, 1147
MmeI TCCRAC 2 cut(s) 1016, 1156
MnlI CCTC 7 cut(s) 43, 49, 282, 603, 625, 795, 1237
Mox20I TGGCCA 1 cut(s) 699
MroI TCCGGA 1 cut(s) 730
MroXI GAANNNNTTC 1 cut(s) 144
MscI TGGCCA 1 cut(s) 699
MseI TTAA 5 cut(s) 192, 354, 378, 516, 923
MslI CAYNNNNRTG 1 cut(s) 846
Msp20I TGGCCA 1 cut(s) 699
MspCI CTTAAG 1 cut(s) 922
MspI CCGG 3 cut(s) 360, 668, 731
MspR9I CCNGG 2 cut(s) 682, 1098
MunI CAATTG 1 cut(s) 227
MvaI CCWGG 2 cut(s) 682, 1098
MvnI CGCG 2 cut(s) 153, 189
MwoI GCNNNNNNNGC 6 cut(s) 549, 911, 1010, 1019, 1052, 1346
NdeII GATC 4 cut(s) 253, 469, 787, 812
NheI GCTAGC 1 cut(s) 1139
NlaIII CATG 4 cut(s) 295, 367, 704, 845
NlaIV GGNNCC 3 cut(s) 270, 712, 729
NmuCI GTSAC 2 cut(s) 384, 822
NspI RCATGY 1 cut(s) 367
NspV TTCGAA 1 cut(s) 303
PaeI GCATGC 1 cut(s) 367
PaeR7I CTCGAG 1 cut(s) 158
PdmI GAANNNNTTC 1 cut(s) 144
PfeI GAWTC 3 cut(s) 612, 1076, 1121
PkrI GCNGC 5 cut(s) 43, 324, 748, 988, 1054
PleI GAGTC 2 cut(s) 667, 1147
PpsI GAGTC 2 cut(s) 667, 1147
Psp124BI GAGCTC 1 cut(s) 1351
Psp6I CCWGG 2 cut(s) 680, 1096
PspEI GGTNACC 1 cut(s) 384
PspGI CCWGG 2 cut(s) 680, 1096
PspN4I GGNNCC 3 cut(s) 270, 712, 729
PspPI GGNCC 1 cut(s) 621
PsrI GAACNNNNNNTAC 2 cut(s) 703, 735
PstI CTGCAG 1 cut(s) 1006
RsaI GTAC 5 cut(s) 222, 348, 508, 532, 712
RsaNI GTAC 5 cut(s) 221, 347, 507, 531, 711
RseI CAYNNNNRTG 1 cut(s) 846
SacI GAGCTC 1 cut(s) 1351
SalI GTCGAC 1 cut(s) 1150
SaqAI TTAA 5 cut(s) 192, 354, 378, 516, 923
SatI GCNGC 5 cut(s) 42, 323, 747, 987, 1053
Sau3AI GATC 4 cut(s) 253, 469, 787, 812
Sau96I GGNCC 1 cut(s) 621
SchI GAGTC 2 cut(s) 668, 1147
ScrFI CCNGG 2 cut(s) 682, 1098
SduI GDGCHC 2 cut(s) 1062, 1351
SexAI ACCWGGT 1 cut(s) 680
SfaNI GCATC 3 cut(s) 138, 155, 503
SfcI CTRYAG 1 cut(s) 1002
Sfr274I CTCGAG 1 cut(s) 158
SfuI TTCGAA 1 cut(s) 303
SlaI CTCGAG 1 cut(s) 158
SmiMI CAYNNNNRTG 1 cut(s) 846
SmlI CTYRAG 3 cut(s) 158, 922, 1373
SmoI CTYRAG 3 cut(s) 158, 922, 1373
SphI GCATGC 1 cut(s) 367
SsiI CCGC 4 cut(s) 153, 541, 763, 1340
SspMI CTAG 4 cut(s) 326, 618, 1140, 1368
SstI GAGCTC 1 cut(s) 1351
StyD4I CCNGG 2 cut(s) 680, 1096
TaaI ACNGT 7 cut(s) 265, 346, 547, 742, 1090, 1199, 1214
TaiI ACGT 5 cut(s) 352, 373, 579, 936, 1151
TaqI TCGA 5 cut(s) 159, 303, 811, 1151, 1280
TatI WGTACW 1 cut(s) 220
TfiI GAWTC 3 cut(s) 612, 1076, 1121
Tru1I TTAA 5 cut(s) 192, 354, 378, 516, 923
Tru9I TTAA 5 cut(s) 192, 354, 378, 516, 923
TscAI CASTG 4 cut(s) 263, 550, 745, 1006
TseFI GTSAC 2 cut(s) 384, 822
TseI GCWGC 5 cut(s) 41, 322, 746, 986, 1052
Tsp45I GTSAC 2 cut(s) 384, 822
TspDTI ATGAA 3 cut(s) 280, 942, 1331
TspGWI ACGGA 1 cut(s) 1133
TspRI CASTG 4 cut(s) 263, 550, 745, 1006
Vha464I CTTAAG 1 cut(s) 922
XagI CCTNNNNNAGG 1 cut(s) 1241
XapI RAATTY 3 cut(s) 564, 975, 1253
XceI RCATGY 1 cut(s) 367
XcmI CCANNNNNNNNNTGG 1 cut(s) 568
XhoI CTCGAG 1 cut(s) 158
XmiI GTMKAC 1 cut(s) 1151
XmnI GAANNNNTTC 1 cut(s) 144
XspI CTAG 4 cut(s) 326, 618, 1140, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.