Rmu_sc0001188.1_g000019

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001188.1
OG0000114
Physical Location & Seq
Forward (+)
74334 .. 76896
2563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001188.1_g000019.1.cds

Sequence Viewer

Length: 1926 bp
atgtttgcactttgcagtgaccagatcatggaattagtacttcctctctgcccaattttagagatgaaaccatttgggattttgtcggtgtttctctcactaatagttctccctatcccatctctaagttcgaccaacacaacaacatgccccatagattttagctatgttcttactgtccccttcaattcctcatcgtgcaaaaacttcgaattccctaccaaaacccccgaattggacgtcattaagaactcgtgttgccgtacccttttatctgtccttgggataggccttgctcaacacctcaaagacacttctcttttcctactccccaacatagccacatcaacttcttgcctccaagactaccagtccaagctcacctctatctccctccctacctatgttgttgattcttgctttgagccttcacagtttatcaccagccccaaaatctgtgcaagtattgagtcttcccaagattgggtagacaagcttaaccatagcactgcacttgactctgcatgcaagccagacctcaccgatcactcatcctgcgatgcttgcgtagcggctggcttcaaaattcagcaacaattaattaccgttgatggtaacacttctcactctagagattgttggatctttacagttctttatgctgctggtatgatcaatgagcttggacctgaaagtagtggctctttatcgtgtatctttggtttattattggattctcatgtcgattcgaatagaaggagcattaccactcttgtaattatactaacctcagcaacagccggatttcttataatactctgttcctcgttcttatggaagaagaaaactctgagaaacagaagggagcacagtaagacaaccataaggaagtttaatgctggagatggagaaaatgatacagagttaccgctctttagcttaaggagtatattagaagctacagacaatttcgccgaagctaataaacttggagagggaggatttggccctgtttataagggaatttttcctaaaaatcaggaagtagccatgaaaagactgtcaaagaagtctggtcaaggacatccagagtttgtgaatgagttaaagcttatagccaagctccaacataccaatcttgttaggctcctgggttgctgtattgatgaggaggaaatgatattggtttacgagtacatgcccaatcgaagtttggacaaatttttgtttgaaccatctgaaaacacaaaattggattggggtaagcgctttcgaattattgaaggtattgctcacggaatactttatatccacaagtactccagattgaaaatcattcacagggatctaaaagcaagcaatgttctcctggatgaagaaatgaaccccaaaatttccgactttggaatggcaaagattttagagaaaaatcaaactgaagcaaatacaaacagggttgttgggacatacgggtacatgtcacctgagtatgcaagctatggtaatttctctgagaaatcagatgtattcagctttggagtgctgctgttggagattataagtggaaagaggaatgctgctttctattgctttgaagatccattaactcttgcaggatgggcttggaaattatggaaagaaggtagaggaatgaaggtgattgatgcctgtgtgagaaaggaatgcccgcctcatgaagctttaaagtgtattcatgtggcttttttgtgtgttcaagaagatccagctgatcgaccaacaatgacaactgtaattcacatgttgggccatgagactacatcacttccaccctccaaagaacctgcgtttttggcacttagtaattccagtgttgtgggttcatctccatcatttagcactttttccaacaatgcactcaccattagtataccagaaggtcgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

641

Amino Acids

71.1

Weight (kDa)

6.14

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 812, 1017, 1559
AatII GACGTC 1 cut(s) 243
Acc36I ACCTGC 1 cut(s) 1831
AccB7I CCANNNNNTGG 1 cut(s) 28
AccBSI CCGCTC 1 cut(s) 931
AccI GTMKAC 2 cut(s) 489, 1909
AciI CCGC 3 cut(s) 572, 929, 1688
AclWI GGATC 4 cut(s) 650, 1353, 1592, 1736
AcsI RAATTY 5 cut(s) 212, 585, 1023, 1220, 1392
AcuI CTGAAG 1 cut(s) 1458
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 5 cut(s) 39, 265, 1196, 1319, 1475
AfeI AGCGCT 1 cut(s) 1268
AfiI CCNNNNNNNGG 4 cut(s) 28, 235, 483, 484
AflII CTTAAG 1 cut(s) 940
AflIII ACRYGT 2 cut(s) 1476, 1779
AgsI TTSAA 7 cut(s) 187, 583, 1232, 1283, 1330, 1595, 1736
AhdI GACNNNNNGTC 1 cut(s) 370
AjnI CCWGG 2 cut(s) 1149, 1368
Alw21I GWGCWC 1 cut(s) 870
Alw26I GTCTC 1 cut(s) 1787
AlwI GGATC 4 cut(s) 650, 1353, 1592, 1736
Aor51HI AGCGCT 1 cut(s) 1268
AoxI GGCC 3 cut(s) 289, 1006, 1786
ApeKI GCWGC 3 cut(s) 662, 1543, 1577
ApoI RAATTY 5 cut(s) 212, 585, 1023, 1220, 1392
ArsI GACNNNNNNTTYG 2 cut(s) 225, 257
AseI ATTAAT 1 cut(s) 599
AspLEI GCGC 1 cut(s) 1269
AspS9I GGNCC 3 cut(s) 686, 1007, 1786
AsuHPI GGTGA 6 cut(s) 373, 433, 532, 1473, 1669, 1891
AsuII TTCGAA 3 cut(s) 210, 749, 1273
AvaII GGWCC 1 cut(s) 686
BarI GAAGNNNNNNTAC 4 cut(s) 457, 489, 748, 780
BauI CACGAG 1 cut(s) 253
BbsI GAAGAC 1 cut(s) 465
Bbv12I GWGCWC 1 cut(s) 870
BbvCI CCTCAGC 1 cut(s) 790
BbvI GCAGC 3 cut(s) 649, 1530, 1564
BccI CCATC 6 cut(s) 127, 605, 899, 1243, 1611, 1876
BceAI ACGGC 1 cut(s) 246
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BciT130I CCWGG 2 cut(s) 1151, 1370
BclI TGATCA 1 cut(s) 672
BcoDI GTCTC 1 cut(s) 1787
BfaI CTAG 1 cut(s) 630
BfmI CTRYAG 1 cut(s) 960
BfoI RGCGCY 1 cut(s) 1270
BfrI CTTAAG 1 cut(s) 940
BfuAI ACCTGC 1 cut(s) 1831
BisI GCNGC 4 cut(s) 573, 663, 1544, 1578
BlsI GCNGC 4 cut(s) 574, 664, 1545, 1579
BmcAI AGTACT 2 cut(s) 39, 1319
Bme1390I CCNGG 2 cut(s) 1151, 1370
Bme18I GGWCC 1 cut(s) 686
BmeRI GACNNNNNGTC 1 cut(s) 370
BmgT120I GGNCC 3 cut(s) 686, 1007, 1786
BmiI GGNNCC 1 cut(s) 1148
BmrFI CCNGG 2 cut(s) 1151, 1370
BmsI GCATC 2 cut(s) 550, 1654
BpiI GAAGAC 1 cut(s) 465
BpmI CTGGAG 2 cut(s) 921, 1306
Bpu10I CCTNAGC 1 cut(s) 790
Bpu14I TTCGAA 3 cut(s) 210, 749, 1273
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 2 cut(s) 280, 1150
BsaXI ACNNNNNCTCC 2 cut(s) 1304, 1334
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 235, 483, 484
Bse1I ACTGG 2 cut(s) 370, 1848
Bse3DI GCAATG 1 cut(s) 1366
BseBI CCWGG 2 cut(s) 1151, 1370
BseDI CCNNGG 2 cut(s) 280, 1150
BseGI GGATG 4 cut(s) 551, 1084, 1378, 1622
BseLI CCNNNNNNNGG 4 cut(s) 28, 235, 483, 484
BseMI GCAATG 1 cut(s) 1366
BseMII CTCAG 4 cut(s) 804, 842, 1476, 1503
BseNI ACTGG 2 cut(s) 370, 1848
BseRI GAGGAG 1 cut(s) 1184
BseXI GCAGC 3 cut(s) 649, 1530, 1564
BsgI GTGCAG 1 cut(s) 495
BshFI GGCC 3 cut(s) 291, 1008, 1788
BsiHKAI GWGCWC 1 cut(s) 870
BsiSI CCGG 1 cut(s) 801
BslFI GGGAC 2 cut(s) 164, 1477
BslI CCNNNNNNNGG 4 cut(s) 28, 235, 483, 484
BsmAI GTCTC 1 cut(s) 1787
BsmFI GGGAC 2 cut(s) 164, 1477
BsmI GAATGC 2 cut(s) 1579, 1688
BsnI GGCC 3 cut(s) 291, 1008, 1788
Bsp119I TTCGAA 3 cut(s) 210, 749, 1273
Bsp1286I GDGCHC 1 cut(s) 870
Bsp143I GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
BspACI CCGC 3 cut(s) 572, 929, 1688
BspANI GGCC 3 cut(s) 291, 1008, 1788
BspCNI CTCAG 4 cut(s) 803, 843, 1477, 1504
BspHI TCATGA 1 cut(s) 1693
BspLI GGNNCC 1 cut(s) 1148
BspMI ACCTGC 1 cut(s) 1831
BspPI GGATC 4 cut(s) 650, 1353, 1592, 1736
BspT104I TTCGAA 3 cut(s) 210, 749, 1273
BspTI CTTAAG 1 cut(s) 940
BsrBI CCGCTC 1 cut(s) 931
BsrDI GCAATG 1 cut(s) 1366
BsrI ACTGG 2 cut(s) 370, 1848
BssECI CCNNGG 2 cut(s) 280, 1150
BssMI GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
BssNAI GTATAC 1 cut(s) 1910
BssNI GRCGYC 1 cut(s) 240
BssSI CACGAG 1 cut(s) 253
BssT1I CCWWGG 1 cut(s) 280
Bst1107I GTATAC 1 cut(s) 1910
Bst2BI CACGAG 1 cut(s) 253
Bst2UI CCWGG 2 cut(s) 1151, 1370
Bst4CI ACNGT 7 cut(s) 178, 435, 607, 652, 872, 1062, 1771
BstACI GRCGYC 1 cut(s) 240
BstAFI CTTAAG 1 cut(s) 940
BstBI TTCGAA 3 cut(s) 210, 749, 1273
BstC8I GCNNGC 7 cut(s) 526, 530, 565, 577, 1357, 1495, 1688
BstDEI CTNAG 6 cut(s) 125, 790, 851, 1485, 1512, 1838
BstF5I GGATG 4 cut(s) 551, 1084, 1378, 1622
BstH2I RGCGCY 1 cut(s) 1270
BstHHI GCGC 1 cut(s) 1269
BstKTI GATC 8 cut(s) 27, 547, 645, 675, 1348, 1600, 1744, 1753
BstMAI GTCTC 1 cut(s) 1787
BstMBI GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
BstMWI GCNNNNNNNGC 4 cut(s) 564, 569, 1619, 1832
BstNI CCWGG 2 cut(s) 1151, 1370
BstNSI RCATGY 5 cut(s) 150, 528, 1201, 1480, 1783
BstSCI CCNGG 2 cut(s) 1149, 1368
BstSFI CTRYAG 1 cut(s) 960
BstV1I GCAGC 3 cut(s) 649, 1530, 1564
BstV2I GAAGAC 1 cut(s) 465
BstX2I RGATCY 4 cut(s) 642, 1345, 1597, 1741
BstXI CCANNNNNNTGG 1 cut(s) 1855
BstYI RGATCY 4 cut(s) 642, 1345, 1597, 1741
BstZ17I GTATAC 1 cut(s) 1910
BsuRI GGCC 3 cut(s) 291, 1008, 1788
BtgZI GCGATG 1 cut(s) 573
BtsCI GGATG 4 cut(s) 551, 1084, 1378, 1622
BtsI GCAGTG 2 cut(s) 22, 507
BtsIMutI CAGTG 3 cut(s) 22, 507, 1855
BveI ACCTGC 1 cut(s) 1831
Cac8I GCNNGC 7 cut(s) 526, 530, 565, 577, 1357, 1495, 1688
CciI TCATGA 1 cut(s) 1693
CfoI GCGC 1 cut(s) 1269
Cfr13I GGNCC 3 cut(s) 686, 1007, 1786
Csp6I GTAC 5 cut(s) 38, 264, 1195, 1318, 1474
CviQI GTAC 5 cut(s) 38, 264, 1195, 1318, 1474
DdeI CTNAG 6 cut(s) 125, 790, 851, 1485, 1512, 1838
DpnI GATC 8 cut(s) 26, 546, 644, 674, 1347, 1599, 1743, 1752
DpnII GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
DraI TTTAAA 1 cut(s) 1704
DriI GACNNNNNGTC 1 cut(s) 370
Eam1105I GACNNNNNGTC 1 cut(s) 370
Eco130I CCWWGG 1 cut(s) 280
Eco147I AGGCCT 1 cut(s) 291
Eco47I GGWCC 1 cut(s) 686
Eco47III AGCGCT 1 cut(s) 1268
Eco57I CTGAAG 1 cut(s) 1458
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 2 cut(s) 1149, 1368
EcoT14I CCWWGG 1 cut(s) 280
ErhI CCWWGG 1 cut(s) 280
FaqI GGGAC 2 cut(s) 164, 1477
FauI CCCGC 1 cut(s) 1695
FbaI TGATCA 1 cut(s) 672
FblI GTMKAC 2 cut(s) 489, 1909
Fnu4HI GCNGC 4 cut(s) 573, 663, 1544, 1578
FokI GGATG 4 cut(s) 538, 1071, 1385, 1629
Fsp4HI GCNGC 4 cut(s) 573, 663, 1544, 1578
FspBI CTAG 1 cut(s) 630
GlaI GCGC 1 cut(s) 1268
GluI GCNGC 4 cut(s) 573, 663, 1544, 1578
GsuI CTGGAG 2 cut(s) 921, 1306
HaeII RGCGCY 1 cut(s) 1270
HaeIII GGCC 3 cut(s) 291, 1008, 1788
HapII CCGG 1 cut(s) 801
HhaI GCGC 1 cut(s) 1269
Hin1I GRCGYC 1 cut(s) 240
Hin6I GCGC 1 cut(s) 1267
HinP1I GCGC 1 cut(s) 1267
HindIII AAGCTT 3 cut(s) 494, 1109, 1698
HinfI GANTC 5 cut(s) 413, 470, 518, 734, 746
HpaII CCGG 1 cut(s) 801
HphI GGTGA 6 cut(s) 373, 433, 532, 1473, 1669, 1891
Hpy166II GTNNAC 3 cut(s) 490, 1189, 1910
Hpy188I TCNGA 5 cut(s) 852, 1240, 1399, 1513, 1522
Hpy188III TCNNGA 6 cut(s) 630, 1040, 1088, 1323, 1694, 1736
Hpy8I GTNNAC 3 cut(s) 490, 1189, 1910
HpyAV CCTTC 8 cut(s) 193, 438, 750, 855, 1277, 1634, 1648, 1910
HpyCH4III ACNGT 7 cut(s) 178, 435, 607, 652, 872, 1062, 1771
HpyCH4IV ACGT 1 cut(s) 240
HpyF10VI GCNNNNNNNGC 4 cut(s) 564, 569, 1619, 1832
HpyF3I CTNAG 6 cut(s) 125, 790, 851, 1485, 1512, 1838
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 1 cut(s) 240
HspAI GCGC 1 cut(s) 1267
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
LmnI GCTCC 4 cut(s) 759, 865, 1128, 1152
Lsp1109I GCAGC 3 cut(s) 649, 1530, 1564
LweI GCATC 2 cut(s) 550, 1654
MaeI CTAG 1 cut(s) 630
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 4 cut(s) 17, 614, 924, 1479
MalI GATC 8 cut(s) 26, 546, 644, 674, 1347, 1599, 1743, 1752
MbiI CCGCTC 1 cut(s) 931
MboI GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
MboII GAAGA 6 cut(s) 465, 850, 853, 1388, 1607, 1751
MflI RGATCY 4 cut(s) 642, 1345, 1597, 1741
MhlI GDGCHC 1 cut(s) 870
MlyI GAGTC 2 cut(s) 479, 512
MmeI TCCRAC 5 cut(s) 620, 1150, 1422, 1530, 1911
MseI TTAA 8 cut(s) 246, 498, 599, 894, 941, 1106, 1604, 1703
MspA1I CMGCKG 1 cut(s) 1748
MspCI CTTAAG 1 cut(s) 940
MspI CCGG 1 cut(s) 801
MspR9I CCNGG 2 cut(s) 1151, 1370
Mva1269I GAATGC 2 cut(s) 1579, 1688
MvaI CCWGG 2 cut(s) 1151, 1370
MwoI GCNNNNNNNGC 4 cut(s) 564, 569, 1619, 1832
NdeII GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
NlaIV GGNNCC 1 cut(s) 1148
NmuCI GTSAC 2 cut(s) 17, 1479
NspI RCATGY 5 cut(s) 150, 528, 1201, 1480, 1783
NspV TTCGAA 3 cut(s) 210, 749, 1273
PaeI GCATGC 1 cut(s) 528
PagI TCATGA 1 cut(s) 1693
PceI AGGCCT 1 cut(s) 291
PciI ACATGT 2 cut(s) 1476, 1779
PctI GAATGC 2 cut(s) 1579, 1688
PfeI GAWTC 3 cut(s) 413, 734, 746
PflMI CCANNNNNTGG 1 cut(s) 28
PfoI TCCNGGA 1 cut(s) 1368
PkrI GCNGC 4 cut(s) 574, 664, 1545, 1579
PleI GAGTC 2 cut(s) 478, 512
PpsI GAGTC 2 cut(s) 478, 512
PscI ACATGT 2 cut(s) 1476, 1779
PshBI ATTAAT 1 cut(s) 599
PsiI TTATAA 3 cut(s) 812, 1017, 1559
Psp6I CCWGG 2 cut(s) 1149, 1368
PspGI CCWGG 2 cut(s) 1149, 1368
PspN4I GGNNCC 1 cut(s) 1148
PspPI GGNCC 3 cut(s) 686, 1007, 1786
PsuI RGATCY 4 cut(s) 642, 1345, 1597, 1741
PvuII CAGCTG 1 cut(s) 1748
RsaI GTAC 5 cut(s) 39, 265, 1196, 1319, 1475
RsaNI GTAC 5 cut(s) 38, 264, 1195, 1318, 1474
SaqAI TTAA 8 cut(s) 246, 498, 599, 894, 941, 1106, 1604, 1703
SatI GCNGC 4 cut(s) 573, 663, 1544, 1578
Sau3AI GATC 8 cut(s) 24, 544, 642, 672, 1345, 1597, 1741, 1750
Sau96I GGNCC 3 cut(s) 686, 1007, 1786
ScaI AGTACT 2 cut(s) 39, 1319
SchI GAGTC 2 cut(s) 479, 512
ScrFI CCNGG 2 cut(s) 1151, 1370
SduI GDGCHC 1 cut(s) 870
SfaNI GCATC 2 cut(s) 550, 1654
SfcI CTRYAG 1 cut(s) 960
SfuI TTCGAA 3 cut(s) 210, 749, 1273
SinI GGWCC 1 cut(s) 686
SmlI CTYRAG 1 cut(s) 940
SmoI CTYRAG 1 cut(s) 940
SphI GCATGC 1 cut(s) 528
SseBI AGGCCT 1 cut(s) 291
SsiI CCGC 3 cut(s) 572, 929, 1688
SspMI CTAG 1 cut(s) 630
StuI AGGCCT 1 cut(s) 291
StyD4I CCNGG 2 cut(s) 1149, 1368
StyI CCWWGG 1 cut(s) 280
TaaI ACNGT 7 cut(s) 178, 435, 607, 652, 872, 1062, 1771
TaiI ACGT 1 cut(s) 243
TaqI TCGA 8 cut(s) 131, 210, 744, 749, 1207, 1273, 1753, 1921
TatI WGTACW 3 cut(s) 37, 1194, 1317
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 3 cut(s) 413, 734, 746
Tru1I TTAA 8 cut(s) 246, 498, 599, 894, 941, 1106, 1604, 1703
Tru9I TTAA 8 cut(s) 246, 498, 599, 894, 941, 1106, 1604, 1703
TscAI CASTG 3 cut(s) 22, 514, 1855
TseFI GTSAC 2 cut(s) 17, 1479
TseI GCWGC 3 cut(s) 662, 1543, 1577
Tsp45I GTSAC 2 cut(s) 17, 1479
TspDTI ATGAA 8 cut(s) 80, 1067, 1389, 1397, 1667, 1703, 1710, 1851
TspGWI ACGGA 1 cut(s) 1311
TspRI CASTG 3 cut(s) 22, 514, 1855
Van91I CCANNNNNTGG 1 cut(s) 28
Vha464I CTTAAG 1 cut(s) 940
VpaK11BI GGWCC 1 cut(s) 686
VspI ATTAAT 1 cut(s) 599
XapI RAATTY 5 cut(s) 212, 585, 1023, 1220, 1392
XbaI TCTAGA 1 cut(s) 629
XceI RCATGY 5 cut(s) 150, 528, 1201, 1480, 1783
XcmI CCANNNNNNNNNTGG 1 cut(s) 1210
XmiI GTMKAC 2 cut(s) 489, 1909
XspI CTAG 1 cut(s) 630
ZraI GACGTC 1 cut(s) 241
ZrmI AGTACT 2 cut(s) 39, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.