RchiOBHm_Chr2g0161001

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000114
Physical Location & Seq
Reverse (-)
76873156 .. 76878366
5211 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52938

Sequence Viewer

Length: 2703 bp
ATGGCCAATCGTAGTTTGGACAATTTTTTGTTTGATTCATCTGAAAACATAAAATTGGAATGGGGCAAACGTATCCAAATTATAGAAGGTATTGCTCAAGGAATGCTTTATATCCATAAGTACTCTCGATTGAAAATCATTCACAGGGATCTGAAAGCAAGTAATGTTCTGTTAGATGAAAAAATGAAGCCAAGAATTTCAGACTTTGGAATGGCAAAGATATTTGAGAAAAATCAAACTGAAGCAAATACAAACAGCGGTTACATGTCACCTGAATATGCAAAGTATGGTCATTTCTTTGAGAAATCAGATGTATTTAGCTTTGGAGTGCTGTTGTTGGAGATTATAAGTGGAAAGAGGAATGCTGCCTTCTATCGTTTTGAACATCCATTAACTCTTGCGGGATGGGCTTGGAAACTATGGAAAGAAGGCAGAGGAATGAAGGTGATTGATGCCTATGTGAGAAAAGAATGTCCATTTGATGAAGCTTTAAGGTGTATGCATGTGGCTTTTTTGTGTGTTCAAGAAGATCCAATTGATCGACCAACAATGGCAACTGTAATTCACATGTTAGGCCATGAGACTACATCATTTCCACCCCCTAAAGAACCTGCGTTTTTGGCACATAGTAATTCCAGTGTTGTGGGTTCATCTCCATCATCTAGCACTTTTTCCAACAATGCGCTCACCATTAGTATACCAGAAGCCACTGGTAGACTTGAGGTGCAAGTCTCAGATACGTTTGCAGACATTAGATTATGGAAGTGGGATTTTGGTCATACTGAAGGTGTTTTACCGGTAGCTCCTCTCTACCCAAATTTAGTGATGAAACTGATCATTGGGGTTTCGTTGATGTATCTCTCACTAATTGCTTTCCCTACCACCCAATCTCTAAATTCAACCTACACAACAACATGCCCCATGGATCTCAGTTATGTCCTTAGAATCCCCTTCAAATCTTCATCATGCAAAAACTTCCAAGCTCCTCCCAAAAACCCCGAAACCGACATCACCACAATCCCATGTTGTCAAACCCTCTTATCTCTCATTGCAATAGGCCTTGCCCAACACCTAAAAGACACTTCTCTTTTCCTACTCCCCGACATAGCCACTTCAATTACTTGCTTCCAAGATTTCCAGTCCAAGCTCACCTCTCTCTCCCTCCCTTCCTCTATTGTGCCTTATTGTTTTGACCCTATACTATATGTCACCAACCCCAATGGTTGTGCTCATATTGAGTCTTCCCAAGATTGGGTCTCCAAGCTTAACCAGACTGCTGCACTTGAGTCATTTGACACTGCTTGTAAGCCAGACCTCACTGATAAATCGTACTGCGATACTTGTCTGGTGTCCGGCTTTAAGGTTCAGGAAAGTTTGATCAACCTAGATGGTAACAATTCTCACTACAGAAGTTGTTGGTATATAACACTTCGCTATGCTGCTGGTATGATCAATGAGTTTGGACCTGAAAGTAATGGTTCTGTTTCTTGTCTTTTTGGTTTGTCTAAGGATTCTCATGTTGGTTCACCCAAAAAGAGAATTACCACTATTGTAATAGTAATAGTAACAGTATCAGTAATAGCAGGATTGCTTACAATACTTATTTCATACCATGTATGGAGGAAAAGTTTGGCAAAAGGAAGGAAGCATAGTCAGACCATAATCAGTTTTAATGATGGAGATGAAGAAAATGATACAGAATTACCGCTTTTTAACTTCAGGAGTATATTAGTTGCTACAAACAATTTCTGTGAAGCTAATAAACTTGGAGAGGGGGGATTTGGCCCTGTTTATAAGGGGATTTTGCCTAGAAATAAAGAAGTAGCCATGAAAAGATTGTCAAAGAAGTCTGGGCAAGGACATCAAGAATTCGTTAATGAGTTAAAGCTTATAGCCAAGCTCCAACATACCAATCTTGTTAGGCTCTTGGGTTGCTGTAGTGAAGAGGAGGAAATGATATTGGTTTATGAGTATATGCCCAATCGAAGTTTGGACAAATTTTTGTTTGATCCAATGGAAAACATAAAATTGGATTGGGGTAAACGCTTTCGAATTATAGAAGGTATAGCTCAAGGAGTACTTTATATCCACAAGCACTCCAGATTGAAAATCATTCACAGAGATCTCAAAGCAAGCAATGTCCTATTGGATGAAGAAATGAAACCCAAAATCTCAGACTTTGGAATGGCAAAGATTTTCGAGAAAAATCAAATTGAAGCAAATACAAAAAGGATTGTTGGAACATACGGCTACATGTCACCTGAGTATGCACGTTTTGGCCATTTCTCTGAAAAATCGGATGTATTTAGCTTCGGAGTGCTGCTGTTGGAGATTGTAAGTGGGAAGAGAAATGCTGCTTTGTATCGCTTTGAACATCCACTAACTCTTGCAGGATGGGCTTGGAAATTATGGAAAGAAGGTAGAGGAATGAAGGTGATTGATGCGTCTGTGAGGGAAACATGCGTGCCTCATGAAGCTTTAAGGTGTATCCATTTAGCATTTTTGTGCGTTCAAGAAGATCCAGCTGATCGACCAACAATGGCTACTGTAATTCTCATGTTGGGCAATGAATCCACATCACTTCCACTCTCCAAAGAACCTGCGTTTACAGCACATAGTAATTCCGATGCTCATGGTTCCTGTCCAGCATCTATCAATTTTTCCAACAATGTAATCACCATTAGTATCCCCGAAGGTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

900

Amino Acids

100.96

Weight (kDa)

7.53

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 190 9.6e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 16 - 122 4e-23 Protein kinase domain
SPARK PF19160 303 - 472 3.3e-37 SPARK
Pkinase PF00069 586 - 850 4.4e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 587 - 851 1.3e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 347, 1794
Acc36I ACCTGC 2 cut(s) 619, 2608
AccI GTMKAC 2 cut(s) 697, 715
AciI CCGC 3 cut(s) 258, 401, 1706
AclWI GGATC 5 cut(s) 156, 524, 933, 2003, 2513
AcoI YGGCCR 2 cut(s) 3, 2278
AcsI RAATTY 5 cut(s) 195, 817, 895, 1868, 1997
AcuI CTGAAG 3 cut(s) 261, 804, 1702
AfaI GTAC 3 cut(s) 122, 1331, 2079
AfiI CCNNNNNNNGG 2 cut(s) 1251, 1252
AflIII ACRYGT 3 cut(s) 264, 567, 2253
AgeI ACCGGT 1 cut(s) 796
Alw21I GWGCWC 1 cut(s) 1231
Alw26I GTCTC 3 cut(s) 575, 736, 1261
AlwI GGATC 5 cut(s) 156, 524, 933, 2003, 2513
AoxI GGCC 5 cut(s) 3, 574, 1057, 1783, 2278
ApeKI GCWGC 5 cut(s) 365, 1277, 1439, 2320, 2354
ApoI RAATTY 5 cut(s) 195, 817, 895, 1868, 1997
AsiGI ACCGGT 1 cut(s) 796
AspLEI GCGC 1 cut(s) 685
AspS9I GGNCC 2 cut(s) 1463, 1784
AsuII TTCGAA 1 cut(s) 2050
AvaII GGWCC 1 cut(s) 1463
BalI TGGCCA 2 cut(s) 5, 2280
BarI GAAGNNNNNNTAC 2 cut(s) 777, 809
BbsI GAAGAC 1 cut(s) 1233
Bbv12I GWGCWC 1 cut(s) 1231
BbvI GCAGC 5 cut(s) 352, 1264, 1426, 2307, 2341
BccI CCATC 5 cut(s) 399, 664, 1382, 1670, 2388
BceAI ACGGC 1 cut(s) 2263
BciVI GTATCC 3 cut(s) 83, 2498, 2696
BclI TGATCA 3 cut(s) 834, 1377, 1449
BcoDI GTCTC 3 cut(s) 575, 736, 1261
BfaI CTAG 3 cut(s) 663, 1385, 1809
BfmI CTRYAG 2 cut(s) 1405, 1936
BfuAI ACCTGC 2 cut(s) 619, 2608
BfuI GTATCC 3 cut(s) 83, 2498, 2696
BglII AGATCT 1 cut(s) 2122
BisI GCNGC 5 cut(s) 366, 1278, 1440, 2321, 2355
BlsI GCNGC 5 cut(s) 367, 1279, 1441, 2322, 2356
BmcAI AGTACT 2 cut(s) 122, 2079
Bme18I GGWCC 1 cut(s) 1463
BmgT120I GGNCC 2 cut(s) 1463, 1784
BmiI GGNNCC 1 cut(s) 2638
BmsI GCATC 4 cut(s) 442, 2431, 2617, 2657
BpiI GAAGAC 1 cut(s) 1233
BpmI CTGGAG 1 cut(s) 2083
Bpu14I TTCGAA 1 cut(s) 2050
BpuEI CTTGAG 4 cut(s) 81, 740, 1304, 2055
BsaI GGTCTC 1 cut(s) 1261
BsaJI CCNNGG 1 cut(s) 921
BsaWI WCCGGW 1 cut(s) 796
BsaXI ACNNNNNCTCC 4 cut(s) 1612, 1642, 2081, 2111
Bsc4I CCNNNNNNNGG 2 cut(s) 1251, 1252
Bse118I RCCGGY 1 cut(s) 796
Bse1I ACTGG 3 cut(s) 636, 715, 1138
Bse3DI GCAATG 3 cut(s) 1047, 2143, 2572
BseDI CCNNGG 1 cut(s) 921
BseGI GGATG 6 cut(s) 385, 410, 2155, 2305, 2374, 2399
BseLI CCNNNNNNNGG 2 cut(s) 1251, 1252
BseMI GCAATG 3 cut(s) 1047, 2143, 2572
BseMII CTCAG 4 cut(s) 747, 943, 2187, 2253
BseNI ACTGG 3 cut(s) 636, 715, 1138
BseRI GAGGAG 3 cut(s) 795, 975, 1961
BseXI GCAGC 5 cut(s) 352, 1264, 1426, 2307, 2341
BsgI GTGCAG 1 cut(s) 1263
BshFI GGCC 5 cut(s) 5, 576, 1059, 1785, 2280
BshTI ACCGGT 1 cut(s) 796
BsiHKAI GWGCWC 1 cut(s) 1231
BsiSI CCGG 2 cut(s) 797, 1353
BslI CCNNNNNNNGG 2 cut(s) 1251, 1252
BsmAI GTCTC 3 cut(s) 575, 736, 1261
BsmI GAATGC 2 cut(s) 108, 367
BsnI GGCC 5 cut(s) 5, 576, 1059, 1785, 2280
Bso31I GGTCTC 1 cut(s) 1261
Bsp119I TTCGAA 1 cut(s) 2050
Bsp1286I GDGCHC 1 cut(s) 1231
Bsp19I CCATGG 1 cut(s) 921
BspACI CCGC 3 cut(s) 258, 401, 1706
BspANI GGCC 5 cut(s) 5, 576, 1059, 1785, 2280
BspCNI CTCAG 4 cut(s) 746, 942, 2186, 2254
BspHI TCATGA 1 cut(s) 2470
BspLI GGNNCC 1 cut(s) 2638
BspMI ACCTGC 2 cut(s) 619, 2608
BspPI GGATC 5 cut(s) 156, 524, 933, 2003, 2513
BspT104I TTCGAA 1 cut(s) 2050
BspTNI GGTCTC 1 cut(s) 1261
BsrDI GCAATG 3 cut(s) 1047, 2143, 2572
BsrFI RCCGGY 1 cut(s) 796
BsrI ACTGG 3 cut(s) 636, 715, 1138
BssAI RCCGGY 1 cut(s) 796
BssECI CCNNGG 1 cut(s) 921
BssNAI GTATAC 1 cut(s) 698
BssT1I CCWWGG 1 cut(s) 921
Bst1107I GTATAC 1 cut(s) 698
Bst4CI ACNGT 3 cut(s) 559, 1570, 2548
Bst6I CTCTTC 2 cut(s) 1938, 2339
BstBI TTCGAA 1 cut(s) 2050
BstC8I GCNNGC 2 cut(s) 2134, 2465
BstDEI CTNAG 6 cut(s) 733, 929, 941, 1506, 2173, 2262
BstDSI CCRYGG 1 cut(s) 921
BstF5I GGATG 6 cut(s) 385, 410, 2155, 2305, 2374, 2399
BstHHI GCGC 1 cut(s) 685
BstMAI GTCTC 3 cut(s) 575, 736, 1261
BstMWI GCNNNNNNNGC 4 cut(s) 407, 620, 2396, 2609
BstNSI RCATGY 6 cut(s) 268, 506, 571, 918, 2257, 2463
BstSFI CTRYAG 2 cut(s) 1405, 1936
BstV1I GCAGC 5 cut(s) 352, 1264, 1426, 2307, 2341
BstV2I GAAGAC 1 cut(s) 1233
BstX2I RGATCY 5 cut(s) 148, 529, 925, 2122, 2518
BstXI CCANNNNNNTGG 1 cut(s) 643
BstYI RGATCY 5 cut(s) 148, 529, 925, 2122, 2518
BstZ17I GTATAC 1 cut(s) 698
BsuI GTATCC 3 cut(s) 83, 2498, 2696
BsuRI GGCC 5 cut(s) 5, 576, 1059, 1785, 2280
BtgI CCRYGG 1 cut(s) 921
BtsCI GGATG 6 cut(s) 385, 410, 2155, 2305, 2374, 2399
BtsI GCAGTG 1 cut(s) 1296
BtsIMutI CAGTG 4 cut(s) 643, 708, 1296, 1317
BveI ACCTGC 2 cut(s) 619, 2608
Cac8I GCNNGC 2 cut(s) 2134, 2465
CciI TCATGA 1 cut(s) 2470
CfoI GCGC 1 cut(s) 685
Cfr10I RCCGGY 1 cut(s) 796
Cfr13I GGNCC 2 cut(s) 1463, 1784
CseI GACGC 1 cut(s) 2433
Csp6I GTAC 3 cut(s) 121, 1330, 2078
CspAI ACCGGT 1 cut(s) 796
CviQI GTAC 3 cut(s) 121, 1330, 2078
DdeI CTNAG 6 cut(s) 733, 929, 941, 1506, 2173, 2262
EaeI YGGCCR 2 cut(s) 3, 2278
Eam1104I CTCTTC 2 cut(s) 1938, 2339
EarI CTCTTC 2 cut(s) 1938, 2339
Eco130I CCWWGG 1 cut(s) 921
Eco147I AGGCCT 1 cut(s) 1059
Eco31I GGTCTC 1 cut(s) 1261
Eco47I GGWCC 1 cut(s) 1463
Eco57I CTGAAG 3 cut(s) 261, 804, 1702
EcoRI GAATTC 1 cut(s) 1868
EcoT14I CCWWGG 1 cut(s) 921
EcoT22I ATGCAT 1 cut(s) 504
ErhI CCWWGG 1 cut(s) 921
FalI AAGNNNNNCTT 4 cut(s) 90, 122, 2064, 2096
FauI CCCGC 1 cut(s) 394
FbaI TGATCA 3 cut(s) 834, 1377, 1449
FblI GTMKAC 2 cut(s) 697, 715
Fnu4HI GCNGC 5 cut(s) 366, 1278, 1440, 2321, 2355
FokI GGATG 6 cut(s) 372, 417, 2162, 2312, 2361, 2406
Fsp4HI GCNGC 5 cut(s) 366, 1278, 1440, 2321, 2355
FspBI CTAG 3 cut(s) 663, 1385, 1809
GlaI GCGC 1 cut(s) 684
GluI GCNGC 5 cut(s) 366, 1278, 1440, 2321, 2355
GsuI CTGGAG 1 cut(s) 2083
HaeIII GGCC 5 cut(s) 5, 576, 1059, 1785, 2280
HapII CCGG 2 cut(s) 797, 1353
HgaI GACGC 1 cut(s) 2433
HhaI GCGC 1 cut(s) 685
Hin6I GCGC 1 cut(s) 683
HinP1I GCGC 1 cut(s) 683
HindIII AAGCTT 4 cut(s) 486, 1262, 1886, 2475
HinfI GANTC 6 cut(s) 35, 945, 1238, 1286, 1511, 2570
HpaII CCGG 2 cut(s) 797, 1353
Hpy166II GTNNAC 5 cut(s) 698, 716, 1526, 2042, 2607
Hpy188III TCNNGA 9 cut(s) 126, 524, 1367, 1720, 1865, 2100, 2200, 2471, 2513
Hpy8I GTNNAC 5 cut(s) 698, 716, 1526, 2042, 2607
HpyCH4III ACNGT 3 cut(s) 559, 1570, 2548
HpyCH4IV ACGT 3 cut(s) 70, 740, 2272
HpyCH4V TGCA 9 cut(s) 281, 502, 727, 746, 969, 1052, 1280, 2270, 2390
HpyF10VI GCNNNNNNNGC 4 cut(s) 407, 620, 2396, 2609
HpyF3I CTNAG 6 cut(s) 733, 929, 941, 1506, 2173, 2262
HpySE526I ACGT 3 cut(s) 70, 740, 2272
HspAI GCGC 1 cut(s) 683
Ksp22I TGATCA 3 cut(s) 834, 1377, 1449
LmnI GCTCC 3 cut(s) 808, 988, 1905
Lsp1109I GCAGC 5 cut(s) 352, 1264, 1426, 2307, 2341
LweI GCATC 4 cut(s) 442, 2431, 2617, 2657
MaeI CTAG 3 cut(s) 663, 1385, 1809
MaeII ACGT 3 cut(s) 70, 740, 2272
MaeIII GTNAC 6 cut(s) 260, 267, 1207, 1391, 1564, 2256
MboII GAAGA 8 cut(s) 539, 951, 1233, 1697, 1955, 2165, 2356, 2528
MfeI CAATTG 1 cut(s) 534
MflI RGATCY 5 cut(s) 148, 529, 925, 2122, 2518
MhlI GDGCHC 1 cut(s) 1231
MlsI TGGCCA 2 cut(s) 5, 2280
MluNI TGGCCA 2 cut(s) 5, 2280
MlyI GAGTC 2 cut(s) 1247, 1295
MmeI TCCRAC 6 cut(s) 318, 699, 1927, 2218, 2307, 2688
Mox20I TGGCCA 2 cut(s) 5, 2280
Mph1103I ATGCAT 1 cut(s) 504
MscI TGGCCA 2 cut(s) 5, 2280
MseI TTAA 9 cut(s) 392, 491, 1266, 1359, 1671, 1713, 1875, 1883, 2480
MslI CAYNNNNRTG 1 cut(s) 2503
Msp20I TGGCCA 2 cut(s) 5, 2280
MspA1I CMGCKG 2 cut(s) 258, 2525
MspI CCGG 2 cut(s) 797, 1353
MunI CAATTG 1 cut(s) 534
Mva1269I GAATGC 2 cut(s) 108, 367
MwoI GCNNNNNNNGC 4 cut(s) 407, 620, 2396, 2609
NcoI CCATGG 1 cut(s) 921
NlaIV GGNNCC 1 cut(s) 2638
NmuCI GTSAC 3 cut(s) 267, 1207, 2256
NsiI ATGCAT 1 cut(s) 504
NspI RCATGY 6 cut(s) 268, 506, 571, 918, 2257, 2463
NspV TTCGAA 1 cut(s) 2050
PagI TCATGA 1 cut(s) 2470
PceI AGGCCT 1 cut(s) 1059
PciI ACATGT 3 cut(s) 264, 567, 2253
PctI GAATGC 2 cut(s) 108, 367
PfeI GAWTC 4 cut(s) 35, 945, 1511, 2570
PinAI ACCGGT 1 cut(s) 796
PkrI GCNGC 5 cut(s) 367, 1279, 1441, 2322, 2356
PleI GAGTC 2 cut(s) 1246, 1294
PpsI GAGTC 2 cut(s) 1246, 1294
PscI ACATGT 3 cut(s) 264, 567, 2253
PsiI TTATAA 2 cut(s) 347, 1794
PspN4I GGNNCC 1 cut(s) 2638
PspPI GGNCC 2 cut(s) 1463, 1784
PsuI RGATCY 5 cut(s) 148, 529, 925, 2122, 2518
PvuII CAGCTG 1 cut(s) 2525
RsaI GTAC 3 cut(s) 122, 1331, 2079
RsaNI GTAC 3 cut(s) 121, 1330, 2078
RseI CAYNNNNRTG 1 cut(s) 2503
SaqAI TTAA 9 cut(s) 392, 491, 1266, 1359, 1671, 1713, 1875, 1883, 2480
SatI GCNGC 5 cut(s) 366, 1278, 1440, 2321, 2355
Sau96I GGNCC 2 cut(s) 1463, 1784
ScaI AGTACT 2 cut(s) 122, 2079
SchI GAGTC 2 cut(s) 1247, 1295
SduI GDGCHC 1 cut(s) 1231
SfaNI GCATC 4 cut(s) 442, 2431, 2617, 2657
SfcI CTRYAG 2 cut(s) 1405, 1936
SfuI TTCGAA 1 cut(s) 2050
SinI GGWCC 1 cut(s) 1463
SmiMI CAYNNNNRTG 1 cut(s) 2503
SmlI CTYRAG 4 cut(s) 96, 719, 1283, 2070
SmoI CTYRAG 4 cut(s) 96, 719, 1283, 2070
SseBI AGGCCT 1 cut(s) 1059
SsiI CCGC 3 cut(s) 258, 401, 1706
SspMI CTAG 3 cut(s) 663, 1385, 1809
StuI AGGCCT 1 cut(s) 1059
StyI CCWWGG 1 cut(s) 921
TaaI ACNGT 3 cut(s) 559, 1570, 2548
TaiI ACGT 3 cut(s) 73, 743, 2275
TaqI TCGA 7 cut(s) 127, 541, 1984, 2050, 2199, 2530, 2698
TatI WGTACW 2 cut(s) 120, 2077
TfiI GAWTC 4 cut(s) 35, 945, 1511, 2570
Tru1I TTAA 9 cut(s) 392, 491, 1266, 1359, 1671, 1713, 1875, 1883, 2480
Tru9I TTAA 9 cut(s) 392, 491, 1266, 1359, 1671, 1713, 1875, 1883, 2480
TscAI CASTG 4 cut(s) 643, 715, 1303, 1324
TseFI GTSAC 3 cut(s) 267, 1207, 2256
TseI GCWGC 5 cut(s) 365, 1277, 1439, 2320, 2354
Tsp45I GTSAC 3 cut(s) 267, 1207, 2256
TspRI CASTG 4 cut(s) 643, 715, 1303, 1324
VpaK11BI GGWCC 1 cut(s) 1463
XapI RAATTY 5 cut(s) 195, 817, 895, 1868, 1997
XceI RCATGY 6 cut(s) 268, 506, 571, 918, 2257, 2463
XcmI CCANNNNNNNNNTGG 2 cut(s) 13, 1987
XmiI GTMKAC 2 cut(s) 697, 715
XspI CTAG 3 cut(s) 663, 1385, 1809
ZrmI AGTACT 2 cut(s) 122, 2079
Zsp2I ATGCAT 1 cut(s) 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.