RchiOBHm_Chr2g0161011

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000114
Physical Location & Seq
Reverse (-)
76878641 .. 76879963
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52939

Sequence Viewer

Length: 1323 bp
ATGGGGTGGCTCTTGTGTTACCTTGTAACACTGCTCGTATCTCACATCCTGTCATTATGTACCTGCCAAGACAAAATAGTACCAGGACAGTATATCGGTGGTAACCACACTTTGGTTTCTTCCCTTGGGACCTTTTCATTAGGCTTCTTCAATCCTAATGAAAATTCTACTAAATACTTCCTTGGTATGCGATTCAACAAATTCCCAAATACTGCTTTAGTATGGGTGGCTAATAGAGAATCTCCACTTGATTCTCCGGATTTCTTTATGCTCAGCAGCGATGGAAATCTTGTGGTGTTGGATCAAACTAGAAAACTTGTCTGGTCAACTAATGCATCAGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGGTTTGAAGAAGTCACTTTGTGGGAGAGCTTCGATCCCTGTGATACTATGTTGCCTGGCATTAAGATTTCCTTGAACAAAAAGACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCCGGGAAGTTCACCTTCGGAATAGATCCTAAAGTACCAGTTCAGGCCTTTATCTGGAAGGAAACTACTCCGTATTATAGAAGTTCTGTGTACATTGGCAAGGATACAGCACATTTTCAAAATCCAGGTGGAACCGCGTTTTTCCTTTCATACAACTTTGATGTTGATGATGTTTATCTTGCTTACAGTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCTACAGGGCAAATTAAACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGAACTAGGAAATTCACGGCCTGTTGATAACTGTGACTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGTCATCACCATGCAAATGTTTGACTGGTTTTTCGGCCAAGTTTCCAAACCAATGGGCGGTGGGGAATTGGTCCAGTGGCTGCGTTAGGGAAAAGGTGTTGACATGTGGTAATGGCATAAAAAGTTACTTTTCAAAGCTTGAAAGGGTGAAACTGCCGGATCATTTTGTTCTGTTAAACAATAGGAGTATGAGCGAGTGTGAATCTGAATGTCAGCAGAACTGTTCTTGCACAGCTTATAATTATGTAGATGCGACAGATGGAAGTAATATTGGGACATGCTTGGCCTGGTTTGGAGAATTACTGGATCTAGAAGAGAATAAAACTATTTTTGCAAATGATATTTATATTCGTGTTCATGGCTCCGAACTAGGTATGTATTTCGTTTTTTGCTATTTTCTTTATGGATGTGTGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

440

Amino Acids

49.41

Weight (kDa)

5.85

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 172 2.1e-27 D-mannose binding lectin
S_locus_glycop PF00954 231 - 315 7.1e-18 S-locus glycoprotein domain
PAN_2 PF08276 342 - 405 5.4e-14 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
Acc36I ACCTGC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 501
AccB7I CCANNNNNTGG 1 cut(s) 112
AccII CGCG 1 cut(s) 674
AccIII TCCGGA 1 cut(s) 256
AciI CCGC 3 cut(s) 672, 870, 962
AclWI GGATC 8 cut(s) 309, 431, 524, 557, 758, 771, 1071, 1218
AcoI YGGCCR 2 cut(s) 490, 939
AcsI RAATTY 4 cut(s) 163, 200, 799, 829
AcyI GRCGYC 1 cut(s) 502
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 4 cut(s) 61, 81, 573, 629
AfiI CCNNNNNNNGG 4 cut(s) 112, 539, 591, 961
AflIII ACRYGT 1 cut(s) 1007
AgsI TTSAA 7 cut(s) 151, 196, 410, 478, 656, 1038, 1046
AjnI CCWGG 5 cut(s) 82, 457, 512, 661, 1190
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
AluBI AGCT 4 cut(s) 432, 738, 1042, 1139
AluI AGCT 4 cut(s) 432, 738, 1042, 1139
Alw26I GTCTC 1 cut(s) 733
AlwI GGATC 8 cut(s) 309, 431, 524, 557, 758, 771, 1071, 1218
AlwNI CAGNNNCTG 2 cut(s) 344, 984
Ama87I CYCGRG 1 cut(s) 539
Aor13HI TCCGGA 1 cut(s) 256
AoxI GGCC 5 cut(s) 490, 582, 836, 939, 1188
ApeKI GCWGC 3 cut(s) 276, 518, 984
ApoI RAATTY 4 cut(s) 163, 200, 799, 829
ArsI GACNNNNNNTTYG 2 cut(s) 919, 951
AspLEI GCGC 2 cut(s) 504, 523
AspS9I GGNCC 3 cut(s) 129, 872, 975
AsuC2I CCSGG 2 cut(s) 540, 541
AsuHPI GGTGA 4 cut(s) 541, 903, 908, 1063
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 3 cut(s) 129, 872, 975
BalI TGGCCA 1 cut(s) 492
BamHI GGATCC 1 cut(s) 763
BanI GGYRCC 1 cut(s) 501
BbvI GCAGC 3 cut(s) 288, 505, 971
BccI CCATC 2 cut(s) 275, 1157
BceAI ACGGC 1 cut(s) 851
BciT130I CCWGG 5 cut(s) 84, 459, 514, 663, 1192
BciVI GTATCC 2 cut(s) 376, 634
BcnI CCSGG 2 cut(s) 540, 541
BcoDI GTCTC 1 cut(s) 733
BfaI CTAG 6 cut(s) 309, 377, 804, 824, 1214, 1274
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 1 cut(s) 505
BfuAI ACCTGC 1 cut(s) 71
BfuI GTATCC 2 cut(s) 376, 634
BisI GCNGC 3 cut(s) 277, 519, 985
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 3 cut(s) 278, 520, 986
Bme1390I CCNGG 7 cut(s) 84, 459, 514, 540, 541, 663, 1192
Bme18I GGWCC 3 cut(s) 129, 872, 975
BmeT110I CYCGRG 1 cut(s) 539
BmgT120I GGNCC 3 cut(s) 129, 872, 975
BmiI GGNNCC 6 cut(s) 130, 503, 670, 765, 874, 1267
BmrFI CCNGG 7 cut(s) 84, 459, 514, 540, 541, 663, 1192
BmsI GCATC 2 cut(s) 344, 1144
Bpu1102I GCTNAGC 1 cut(s) 272
BpuMI CCSGG 2 cut(s) 540, 541
BsaBI GATNNNNATC 2 cut(s) 285, 711
BsaHI GRCGYC 1 cut(s) 502
BsaJI CCNNGG 4 cut(s) 124, 181, 513, 539
BsaWI WCCGGW 2 cut(s) 256, 386
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 539, 591, 961
Bse1I ACTGG 6 cut(s) 373, 493, 575, 934, 978, 1212
Bse3DI GCAATG 2 cut(s) 360, 865
Bse8I GATNNNNATC 2 cut(s) 285, 711
BseAI TCCGGA 1 cut(s) 256
BseBI CCWGG 5 cut(s) 84, 459, 514, 663, 1192
BseDI CCNNGG 4 cut(s) 124, 181, 513, 539
BseGI GGATG 3 cut(s) 45, 509, 1316
BseJI GATNNNNATC 2 cut(s) 285, 711
BseLI CCNNNNNNNGG 4 cut(s) 112, 539, 591, 961
BseMI GCAATG 2 cut(s) 360, 865
BseMII CTCAG 3 cut(s) 286, 392, 753
BseNI ACTGG 6 cut(s) 373, 493, 575, 934, 978, 1212
BseXI GCAGC 3 cut(s) 288, 505, 971
Bsh1236I CGCG 1 cut(s) 674
BshFI GGCC 5 cut(s) 492, 584, 838, 941, 1190
BshNI GGYRCC 1 cut(s) 501
BsiHKCI CYCGRG 1 cut(s) 539
BsiSI CCGG 4 cut(s) 257, 387, 540, 1061
BslFI GGGAC 3 cut(s) 142, 858, 1192
BslI CCNNNNNNNGG 4 cut(s) 112, 539, 591, 961
BsmAI GTCTC 1 cut(s) 733
BsmFI GGGAC 3 cut(s) 142, 858, 1192
BsnI GGCC 5 cut(s) 492, 584, 838, 941, 1190
BsoBI CYCGRG 1 cut(s) 539
Bsp13I TCCGGA 1 cut(s) 256
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 3 cut(s) 672, 870, 962
BspANI GGCC 5 cut(s) 492, 584, 838, 941, 1190
BspCNI CTCAG 3 cut(s) 285, 393, 752
BspEI TCCGGA 1 cut(s) 256
BspFNI CGCG 1 cut(s) 674
BspLI GGNNCC 6 cut(s) 130, 503, 670, 765, 874, 1267
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 8 cut(s) 309, 431, 524, 557, 758, 771, 1071, 1218
BspT107I GGYRCC 1 cut(s) 501
BsrDI GCAATG 2 cut(s) 360, 865
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 6 cut(s) 373, 493, 575, 934, 978, 1212
BssECI CCNNGG 4 cut(s) 124, 181, 513, 539
BssMI GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
BssNI GRCGYC 1 cut(s) 502
BssT1I CCWWGG 2 cut(s) 124, 181
Bst2UI CCWGG 5 cut(s) 84, 459, 514, 663, 1192
Bst4CI ACNGT 4 cut(s) 90, 725, 851, 1127
Bst6I CTCTTC 1 cut(s) 1212
BstACI GRCGYC 1 cut(s) 502
BstAUI TGTACA 1 cut(s) 627
BstDEI CTNAG 3 cut(s) 272, 401, 739
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 3 cut(s) 45, 509, 1316
BstFNI CGCG 1 cut(s) 674
BstH2I RGCGCY 1 cut(s) 505
BstHHI GCGC 2 cut(s) 504, 523
BstKTI GATC 7 cut(s) 304, 439, 532, 565, 766, 1066, 1213
BstMAI GTCTC 1 cut(s) 733
BstMBI GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
BstMWI GCNNNNNNNGC 1 cut(s) 793
BstNI CCWGG 5 cut(s) 84, 459, 514, 663, 1192
BstNSI RCATGY 2 cut(s) 1011, 1185
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 7 cut(s) 82, 457, 512, 538, 539, 661, 1190
BstSFI CTRYAG 1 cut(s) 768
BstUI CGCG 1 cut(s) 674
BstV1I GCAGC 3 cut(s) 288, 505, 971
BstX2I RGATCY 3 cut(s) 562, 763, 1210
BstXI CCANNNNNNTGG 1 cut(s) 957
BstYI RGATCY 3 cut(s) 562, 763, 1210
BsuI GTATCC 2 cut(s) 376, 634
BsuRI GGCC 5 cut(s) 492, 584, 838, 941, 1190
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 3 cut(s) 45, 509, 1316
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 3 cut(s) 29, 730, 985
BveI ACCTGC 1 cut(s) 71
CaiI CAGNNNCTG 2 cut(s) 344, 984
CfoI GCGC 2 cut(s) 504, 523
Cfr13I GGNCC 3 cut(s) 129, 872, 975
Cfr9I CCCGGG 1 cut(s) 539
Csp6I GTAC 4 cut(s) 60, 80, 572, 628
CviAII CATG 4 cut(s) 915, 1008, 1182, 1262
CviQI GTAC 4 cut(s) 60, 80, 572, 628
DdeI CTNAG 3 cut(s) 272, 401, 739
DinI GGCGCC 1 cut(s) 503
DpnI GATC 7 cut(s) 303, 438, 531, 564, 765, 1065, 1212
DpnII GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
DraIII CACNNNGTG 1 cut(s) 423
EaeI YGGCCR 2 cut(s) 490, 939
Eam1104I CTCTTC 1 cut(s) 1212
EarI CTCTTC 1 cut(s) 1212
Eco130I CCWWGG 2 cut(s) 124, 181
Eco147I AGGCCT 1 cut(s) 584
Eco47I GGWCC 3 cut(s) 129, 872, 975
Eco88I CYCGRG 1 cut(s) 539
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 799
EcoRII CCWGG 5 cut(s) 82, 457, 512, 661, 1190
EcoT14I CCWWGG 2 cut(s) 124, 181
EcoT22I ATGCAT 1 cut(s) 337
EgeI GGCGCC 1 cut(s) 503
EheI GGCGCC 1 cut(s) 503
ErhI CCWWGG 2 cut(s) 124, 181
FaeI CATG 4 cut(s) 918, 1011, 1185, 1265
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 536, 568
FaqI GGGAC 3 cut(s) 142, 858, 1192
FatI CATG 4 cut(s) 914, 1007, 1181, 1261
Fnu4HI GCNGC 3 cut(s) 277, 519, 985
FokI GGATG 2 cut(s) 32, 496
Fsp4HI GCNGC 3 cut(s) 277, 519, 985
FspBI CTAG 6 cut(s) 309, 377, 804, 824, 1214, 1274
GlaI GCGC 2 cut(s) 503, 522
GluI GCNGC 3 cut(s) 277, 519, 985
HaeII RGCGCY 1 cut(s) 505
HaeIII GGCC 5 cut(s) 492, 584, 838, 941, 1190
HapII CCGG 4 cut(s) 257, 387, 540, 1061
HhaI GCGC 2 cut(s) 504, 523
Hin1I GRCGYC 1 cut(s) 502
Hin1II CATG 4 cut(s) 918, 1011, 1185, 1265
Hin6I GCGC 2 cut(s) 502, 521
HinP1I GCGC 2 cut(s) 502, 521
HincII GTYRAC 2 cut(s) 327, 1005
HindII GTYRAC 2 cut(s) 327, 1005
HindIII AAGCTT 1 cut(s) 1040
HinfI GANTC 5 cut(s) 192, 239, 251, 358, 1106
HpaII CCGG 4 cut(s) 257, 387, 540, 1061
HphI GGTGA 4 cut(s) 541, 903, 908, 1063
Hpy166II GTNNAC 5 cut(s) 327, 549, 628, 899, 1005
Hpy188I TCNGA 5 cut(s) 402, 557, 733, 1111, 1270
Hpy188III TCNNGA 3 cut(s) 257, 592, 1214
Hpy8I GTNNAC 5 cut(s) 327, 549, 628, 899, 1005
HpyAV CCTTC 2 cut(s) 562, 589
HpyCH4III ACNGT 4 cut(s) 90, 725, 851, 1127
HpyCH4IV ACGT 1 cut(s) 812
HpyCH4V TGCA 5 cut(s) 335, 353, 918, 1134, 1238
HpyF10VI GCNNNNNNNGC 1 cut(s) 793
HpyF3I CTNAG 3 cut(s) 272, 401, 739
HpySE526I ACGT 1 cut(s) 812
Hsp92I GRCGYC 1 cut(s) 502
Hsp92II CATG 4 cut(s) 918, 1011, 1185, 1265
HspAI GCGC 2 cut(s) 502, 521
KasI GGCGCC 1 cut(s) 501
Kpn2I TCCGGA 1 cut(s) 256
Kzo9I GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
LmnI GCTCC 1 cut(s) 1271
Lsp1109I GCAGC 3 cut(s) 288, 505, 971
LweI GCATC 2 cut(s) 344, 1144
MaeI CTAG 6 cut(s) 309, 377, 804, 824, 1214, 1274
MaeII ACGT 1 cut(s) 812
MaeIII GTNAC 6 cut(s) 17, 25, 101, 415, 851, 1028
MalI GATC 7 cut(s) 303, 438, 531, 564, 765, 1065, 1212
MboI GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
MboII GAAGA 4 cut(s) 111, 139, 422, 1229
MflI RGATCY 3 cut(s) 562, 763, 1210
MlsI TGGCCA 1 cut(s) 492
MluCI AATT 9 cut(s) 163, 200, 746, 777, 799, 829, 970, 1144, 1202
MluNI TGGCCA 1 cut(s) 492
Mly113I GGCGCC 1 cut(s) 502
MmeI TCCRAC 3 cut(s) 279, 741, 798
MnlI CCTC 5 cut(s) 373, 396, 744, 887, 1311
Mox20I TGGCCA 1 cut(s) 492
Mph1103I ATGCAT 1 cut(s) 337
MroI TCCGGA 1 cut(s) 256
MscI TGGCCA 1 cut(s) 492
MseI TTAA 3 cut(s) 465, 780, 1079
MslI CAYNNNNRTG 2 cut(s) 913, 919
Msp20I TGGCCA 1 cut(s) 492
MspI CCGG 4 cut(s) 257, 387, 540, 1061
MspR9I CCNGG 7 cut(s) 84, 459, 514, 540, 541, 663, 1192
MvaI CCWGG 5 cut(s) 84, 459, 514, 663, 1192
MvnI CGCG 1 cut(s) 674
MwoI GCNNNNNNNGC 1 cut(s) 793
NarI GGCGCC 1 cut(s) 502
NciI CCSGG 2 cut(s) 540, 541
NdeII GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
NlaIII CATG 4 cut(s) 918, 1011, 1185, 1265
NlaIV GGNNCC 6 cut(s) 130, 503, 670, 765, 874, 1267
NmuCI GTSAC 2 cut(s) 415, 851
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 2 cut(s) 1011, 1185
PceI AGGCCT 1 cut(s) 584
PciI ACATGT 1 cut(s) 1007
PfeI GAWTC 5 cut(s) 192, 239, 251, 358, 1106
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 3 cut(s) 278, 520, 986
PluTI GGCGCC 1 cut(s) 505
PpuMI RGGWCCY 1 cut(s) 129
PscI ACATGT 1 cut(s) 1007
PsiI TTATAA 1 cut(s) 1143
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 5 cut(s) 82, 457, 512, 661, 1190
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 5 cut(s) 82, 457, 512, 661, 1190
PspN4I GGNNCC 6 cut(s) 130, 503, 670, 765, 874, 1267
PspPI GGNCC 3 cut(s) 129, 872, 975
PspPPI RGGWCCY 1 cut(s) 129
PstNI CAGNNNCTG 2 cut(s) 344, 984
PsuI RGATCY 3 cut(s) 562, 763, 1210
RsaI GTAC 4 cut(s) 61, 81, 573, 629
RsaNI GTAC 4 cut(s) 60, 80, 572, 628
RseI CAYNNNNRTG 2 cut(s) 913, 919
SaqAI TTAA 3 cut(s) 465, 780, 1079
SatI GCNGC 3 cut(s) 277, 519, 985
Sau3AI GATC 7 cut(s) 301, 436, 529, 562, 763, 1063, 1210
Sau96I GGNCC 3 cut(s) 129, 872, 975
ScrFI CCNGG 7 cut(s) 84, 459, 514, 540, 541, 663, 1192
SfaNI GCATC 2 cut(s) 344, 1144
SfcI CTRYAG 1 cut(s) 768
SfoI GGCGCC 1 cut(s) 503
SinI GGWCC 3 cut(s) 129, 872, 975
SmaI CCCGGG 1 cut(s) 541
SmiMI CAYNNNNRTG 2 cut(s) 913, 919
Sse9I AATT 9 cut(s) 163, 200, 746, 777, 799, 829, 970, 1144, 1202
SseBI AGGCCT 1 cut(s) 584
SsiI CCGC 3 cut(s) 672, 870, 962
SspDI GGCGCC 1 cut(s) 501
SspI AATATT 1 cut(s) 1174
SspMI CTAG 6 cut(s) 309, 377, 804, 824, 1214, 1274
StuI AGGCCT 1 cut(s) 584
StyD4I CCNGG 7 cut(s) 82, 457, 512, 538, 539, 661, 1190
StyI CCWWGG 2 cut(s) 124, 181
TaaI ACNGT 4 cut(s) 90, 725, 851, 1127
TaiI ACGT 1 cut(s) 815
TaqI TCGA 1 cut(s) 435
TasI AATT 9 cut(s) 163, 200, 746, 777, 799, 829, 970, 1144, 1202
TatI WGTACW 1 cut(s) 627
TfiI GAWTC 5 cut(s) 192, 239, 251, 358, 1106
Tru1I TTAA 3 cut(s) 465, 780, 1079
Tru9I TTAA 3 cut(s) 465, 780, 1079
TscAI CASTG 3 cut(s) 36, 730, 985
TseFI GTSAC 2 cut(s) 415, 851
TseI GCWGC 3 cut(s) 276, 518, 984
Tsp45I GTSAC 2 cut(s) 415, 851
TspDTI ATGAA 5 cut(s) 126, 174, 371, 675, 1250
TspGWI ACGGA 1 cut(s) 597
TspMI CCCGGG 1 cut(s) 539
TspRI CASTG 3 cut(s) 36, 730, 985
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 3 cut(s) 129, 872, 975
XapI RAATTY 4 cut(s) 163, 200, 799, 829
XbaI TCTAGA 1 cut(s) 1213
XceI RCATGY 2 cut(s) 1011, 1185
XmaI CCCGGG 1 cut(s) 539
XspI CTAG 6 cut(s) 309, 377, 804, 824, 1214, 1274
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.