Rroxscaffold_4G00327640

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000114
Physical Location & Seq
Reverse (-)
60419688 .. 60425897
6210 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00327640.1

Sequence Viewer

Length: 1797 bp
ATGGGGTGGCTCTTGTGTTACGTTGTAACAGTGCTCTTATCTCATATCCTGCCATTCTGTACCTGCCAAGACAAAATTGTACCAGGACAGCATATCAGTGGTAACCTGACTTTGGTTTCTTCCCTTAAGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCCCAACTACTGCATTAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGTGATGGAAATCTTGTGGTGTTGGATCAAACTAGAAAACTTGTCTGGTCAACTAAAGCATCCGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTCTGATACTGTGTTGCCTGCCATGAAGATTAGCTTGAACAAAACGACTGGTCAACAAAGGCTCCTTACATCCTGGGCAGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTTGGCATAGATCCTAAAGTACCAGTTCAGGCCTTTGTCTGGAAGGAAACTACTCCATATTATAGAAGCTCTCTGTACATTGGCCAGGATACAAGAACACAGTTTCAAAATCCAGGTGGAACTGCGTTATTCTATTCATACAACTTTGATGTTGATGAGGTTTATCTTACCTGCAGTGTCTCGGATAGCTCAGTAAAATTGAGGATCTGGTTGGATCCCACGGGGCAATTTAGACAGCAGTTGTGGCAGAATTCTAGTAAAACGTGGTTGGAACTAGAGAATTTTCGGGCCGTTGATATCTGTGATTTTTATGCTCATTGCGGTCCCAATAGTGCCTGTCGTAGAGGTGAACCCCTGCCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCTAACCAATCGGCGGTAGGGGATTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGTGGTAACGGCATTCAAGGTTACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTGTTAGAGAATAGGAGTATGAGCGAGTGTGACTCTGAATGCCAGCAGAACTGTTCTTGTACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGTCTTGTGTGGCATGGTTTGGCGAATTACTGGATCTAGTAGAGAATAAAACTACTGGTGCAAATGATATTTATATTCGTGTTCATGGCTCCGAACTACGAATTTTTCCAGGAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCAAGAATGAATTGACACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGTTGCATGGAAGGAGATGAAATGATATTGATCTATGAATACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATGCCTTTGAGAAGACAAAGTTAGATTGGGATACACGCTTTCAAATTATACAAGGTATTGCTCAAGGAGTACTATATATCCACAAGTACTCTAGATTCAAAATCATCCACAGAGATCTAAAAGCAAGCAATGTTCTGTTGGACGGAACAATGAACCCCAAAGTGTCCGACTTTGGAATGGCAAGAATTTTTGACATAAATCAAATTGAAGCAAATACTAACAAGGTATGGGAATTATGGAAAGAAGGTAGAGGAGTGGAGGTAATTGACGCATCGCAAGGGAAACATGCCGGATTCATGAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

598

Amino Acids

67.28

Weight (kDa)

6.51

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 172 5.4e-31 D-mannose binding lectin
S_locus_glycop PF00954 229 - 316 5.2e-15 S-locus glycoprotein domain
PAN_2 PF08276 345 - 406 1.6e-14 PAN-like domain
PK_Tyr_Ser-Thr PF07714 432 - 562 3.1e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 432 - 563 2.1e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 71, 731
AccI GTMKAC 1 cut(s) 184
AciI CCGC 2 cut(s) 873, 965
AclWI GGATC 8 cut(s) 306, 524, 557, 761, 764, 774, 1074, 1221
AcoI YGGCCR 2 cut(s) 634, 1305
AcsI RAATTY 7 cut(s) 160, 197, 802, 832, 1281, 1478, 1674
AdeI CACNNNGTG 1 cut(s) 420
AfaI GTAC 7 cut(s) 61, 81, 573, 629, 1138, 1560, 1577
AfeI AGCGCT 1 cut(s) 522
AfiI CCNNNNNNNGG 5 cut(s) 112, 539, 591, 964, 1314
AflII CTTAAG 1 cut(s) 125
AflIII ACRYGT 2 cut(s) 1010, 1455
AjnI CCWGG 5 cut(s) 82, 512, 636, 664, 1288
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
AluBI AGCT 9 cut(s) 227, 402, 429, 474, 621, 741, 1045, 1142, 1792
AluI AGCT 9 cut(s) 227, 402, 429, 474, 621, 741, 1045, 1142, 1792
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 1 cut(s) 736
AlwI GGATC 8 cut(s) 306, 524, 557, 761, 764, 774, 1074, 1221
AlwNI CAGNNNCTG 1 cut(s) 987
Aor51HI AGCGCT 1 cut(s) 522
AoxI GGCC 4 cut(s) 582, 634, 840, 1305
ApeKI GCWGC 2 cut(s) 518, 987
ApoI RAATTY 7 cut(s) 160, 197, 802, 832, 1281, 1478, 1674
AspLEI GCGC 1 cut(s) 523
AspS9I GGNCC 3 cut(s) 840, 875, 978
AsuC2I CCSGG 2 cut(s) 255, 540
AsuHPI GGTGA 4 cut(s) 541, 906, 911, 1066
AvaII GGWCC 2 cut(s) 875, 978
BalI TGGCCA 2 cut(s) 636, 1307
BamHI GGATCC 1 cut(s) 766
BbsI GAAGAC 1 cut(s) 1508
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 530, 974
BccI CCATC 3 cut(s) 272, 919, 1160
BceAI ACGGC 2 cut(s) 827, 1036
BciT130I CCWGG 5 cut(s) 84, 514, 638, 666, 1290
BciVI GTATCC 3 cut(s) 373, 634, 1513
BcnI CCSGG 2 cut(s) 255, 540
BcoDI GTCTC 1 cut(s) 736
BfaI CTAG 6 cut(s) 306, 374, 807, 827, 1217, 1581
BfmI CTRYAG 1 cut(s) 724
BfoI RGCGCY 1 cut(s) 524
BfrI CTTAAG 1 cut(s) 125
BfuAI ACCTGC 2 cut(s) 71, 731
BfuI GTATCC 3 cut(s) 373, 634, 1513
BglII AGATCT 1 cut(s) 1603
BisI GCNGC 2 cut(s) 519, 988
BlpI GCTNAGC 1 cut(s) 269
BlsI GCNGC 2 cut(s) 520, 989
BmcAI AGTACT 2 cut(s) 1560, 1577
Bme1390I CCNGG 7 cut(s) 84, 255, 514, 540, 638, 666, 1290
Bme18I GGWCC 2 cut(s) 875, 978
BmgT120I GGNCC 3 cut(s) 840, 875, 978
BmiI GGNNCC 4 cut(s) 503, 768, 877, 1270
BmrFI CCNGG 7 cut(s) 84, 255, 514, 540, 638, 666, 1290
BmsI GCATC 3 cut(s) 341, 1480, 1769
BpiI GAAGAC 1 cut(s) 1508
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
BpmI CTGGAG 1 cut(s) 1367
Bpu1102I GCTNAGC 1 cut(s) 269
BpuEI CTTGAG 1 cut(s) 1536
BpuMI CCSGG 2 cut(s) 255, 540
BsaBI GATNNNNATC 2 cut(s) 282, 1442
BsaJI CCNNGG 3 cut(s) 178, 513, 771
BsaWI WCCGGW 1 cut(s) 383
BsaXI ACNNNNNCTCC 4 cut(s) 486, 516, 1734, 1764
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 539, 591, 964, 1314
Bse1I ACTGG 7 cut(s) 370, 493, 575, 937, 981, 1215, 1240
Bse3DI GCAATG 3 cut(s) 357, 868, 1624
Bse8I GATNNNNATC 2 cut(s) 282, 1442
BseBI CCWGG 5 cut(s) 84, 514, 638, 666, 1290
BseDI CCNNGG 3 cut(s) 178, 513, 771
BseGI GGATG 4 cut(s) 332, 436, 509, 1593
BseJI GATNNNNATC 2 cut(s) 282, 1442
BseLI CCNNNNNNNGG 5 cut(s) 112, 539, 591, 964, 1314
BseMI GCAATG 3 cut(s) 357, 868, 1624
BseMII CTCAG 3 cut(s) 283, 389, 756
BseNI ACTGG 7 cut(s) 370, 493, 575, 937, 981, 1215, 1240
BseRI GAGGAG 1 cut(s) 1755
BseXI GCAGC 2 cut(s) 530, 974
BshFI GGCC 4 cut(s) 584, 636, 842, 1307
BsiHKAI GWGCWC 1 cut(s) 36
BsiSI CCGG 5 cut(s) 254, 384, 540, 1064, 1779
BslFI GGGAC 1 cut(s) 861
BslI CCNNNNNNNGG 5 cut(s) 112, 539, 591, 964, 1314
BsmAI GTCTC 1 cut(s) 736
BsmFI GGGAC 1 cut(s) 861
BsmI GAATGC 2 cut(s) 1023, 1121
BsnI GGCC 4 cut(s) 584, 636, 842, 1307
Bsp1286I GDGCHC 1 cut(s) 36
Bsp1407I TGTACA 2 cut(s) 627, 1136
Bsp1720I GCTNAGC 1 cut(s) 269
BspACI CCGC 2 cut(s) 873, 965
BspANI GGCC 4 cut(s) 584, 636, 842, 1307
BspCNI CTCAG 3 cut(s) 282, 390, 755
BspHI TCATGA 2 cut(s) 1345, 1785
BspLI GGNNCC 4 cut(s) 503, 768, 877, 1270
BspMAI CTGCAG 1 cut(s) 728
BspMI ACCTGC 2 cut(s) 71, 731
BspPI GGATC 8 cut(s) 306, 524, 557, 761, 764, 774, 1074, 1221
BspTI CTTAAG 1 cut(s) 125
BsrDI GCAATG 3 cut(s) 357, 868, 1624
BsrGI TGTACA 2 cut(s) 627, 1136
BsrI ACTGG 7 cut(s) 370, 493, 575, 937, 981, 1215, 1240
BssECI CCNNGG 3 cut(s) 178, 513, 771
BssNAI GTATAC 1 cut(s) 185
BssT1I CCWWGG 1 cut(s) 178
Bst1107I GTATAC 1 cut(s) 185
Bst2UI CCWGG 5 cut(s) 84, 514, 638, 666, 1290
Bst4CI ACNGT 4 cut(s) 31, 451, 654, 1130
BstAFI CTTAAG 1 cut(s) 125
BstAUI TGTACA 2 cut(s) 627, 1136
BstC8I GCNNGC 3 cut(s) 459, 1121, 1615
BstDEI CTNAG 3 cut(s) 269, 398, 742
BstDSI CCRYGG 1 cut(s) 771
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 4 cut(s) 332, 436, 509, 1593
BstH2I RGCGCY 1 cut(s) 524
BstHHI GCGC 1 cut(s) 523
BstMAI GTCTC 1 cut(s) 736
BstMWI GCNNNNNNNGC 1 cut(s) 796
BstNI CCWGG 5 cut(s) 84, 514, 638, 666, 1290
BstNSI RCATGY 3 cut(s) 1014, 1459, 1778
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 7 cut(s) 82, 253, 512, 538, 636, 664, 1288
BstSFI CTRYAG 1 cut(s) 724
BstV1I GCAGC 2 cut(s) 530, 974
BstV2I GAAGAC 1 cut(s) 1508
BstX2I RGATCY 5 cut(s) 562, 756, 766, 1213, 1603
BstYI RGATCY 5 cut(s) 562, 756, 766, 1213, 1603
BstZ17I GTATAC 1 cut(s) 185
BsuI GTATCC 3 cut(s) 373, 634, 1513
BsuRI GGCC 4 cut(s) 584, 636, 842, 1307
BtgI CCRYGG 1 cut(s) 771
BtgZI GCGATG 1 cut(s) 1746
BtsCI GGATG 4 cut(s) 332, 436, 509, 1593
BtsI GCAGTG 2 cut(s) 280, 733
BtsIMutI CAGTG 5 cut(s) 36, 103, 280, 733, 988
BveI ACCTGC 2 cut(s) 71, 731
Cac8I GCNNGC 3 cut(s) 459, 1121, 1615
CaiI CAGNNNCTG 1 cut(s) 987
CciI TCATGA 2 cut(s) 1345, 1785
CfoI GCGC 1 cut(s) 523
Cfr13I GGNCC 3 cut(s) 840, 875, 978
CseI GACGC 1 cut(s) 1766
Csp6I GTAC 7 cut(s) 60, 80, 572, 628, 1137, 1559, 1576
CviQI GTAC 7 cut(s) 60, 80, 572, 628, 1137, 1559, 1576
DdeI CTNAG 3 cut(s) 269, 398, 742
DraIII CACNNNGTG 1 cut(s) 420
EaeI YGGCCR 2 cut(s) 634, 1305
Eco130I CCWWGG 1 cut(s) 178
Eco147I AGGCCT 1 cut(s) 584
Eco32I GATATC 1 cut(s) 850
Eco47I GGWCC 2 cut(s) 875, 978
Eco47III AGCGCT 1 cut(s) 522
Eco91I GGTNACC 1 cut(s) 101
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 1 cut(s) 802
EcoRII CCWGG 5 cut(s) 82, 512, 636, 664, 1288
EcoRV GATATC 1 cut(s) 850
EcoT14I CCWWGG 1 cut(s) 178
ErhI CCWWGG 1 cut(s) 178
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 536, 568
FaqI GGGAC 1 cut(s) 861
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 2 cut(s) 519, 988
FokI GGATG 4 cut(s) 319, 423, 496, 1580
Fsp4HI GCNGC 2 cut(s) 519, 988
FspBI CTAG 6 cut(s) 306, 374, 807, 827, 1217, 1581
GlaI GCGC 1 cut(s) 522
GluI GCNGC 2 cut(s) 519, 988
GsuI CTGGAG 1 cut(s) 1367
HaeII RGCGCY 1 cut(s) 524
HaeIII GGCC 4 cut(s) 584, 636, 842, 1307
HapII CCGG 5 cut(s) 254, 384, 540, 1064, 1779
HgaI GACGC 1 cut(s) 1766
HhaI GCGC 1 cut(s) 523
Hin6I GCGC 1 cut(s) 521
HinP1I GCGC 1 cut(s) 521
HincII GTYRAC 3 cut(s) 324, 494, 1008
HindII GTYRAC 3 cut(s) 324, 494, 1008
HindIII AAGCTT 2 cut(s) 1043, 1790
HinfI GANTC 7 cut(s) 189, 236, 248, 355, 1109, 1584, 1782
HpaII CCGG 5 cut(s) 254, 384, 540, 1064, 1779
HphI GGTGA 4 cut(s) 541, 906, 911, 1066
Hpy166II GTNNAC 6 cut(s) 185, 324, 494, 549, 902, 1008
Hpy188I TCNGA 6 cut(s) 399, 445, 736, 1114, 1273, 1657
Hpy188III TCNNGA 7 cut(s) 155, 592, 1298, 1346, 1354, 1581, 1786
Hpy8I GTNNAC 6 cut(s) 185, 324, 494, 549, 902, 1008
HpyAV CCTTC 3 cut(s) 589, 1418, 1727
HpyCH4III ACNGT 4 cut(s) 31, 451, 654, 1130
HpyCH4IV ACGT 2 cut(s) 21, 815
HpyCH4V TGCA 7 cut(s) 212, 350, 726, 921, 990, 1241, 1419
HpyF10VI GCNNNNNNNGC 1 cut(s) 796
HpyF3I CTNAG 3 cut(s) 269, 398, 742
HpySE526I ACGT 2 cut(s) 21, 815
HspAI GCGC 1 cut(s) 521
LmnI GCTCC 2 cut(s) 507, 1274
Lsp1109I GCAGC 2 cut(s) 530, 974
LweI GCATC 3 cut(s) 341, 1480, 1769
MaeI CTAG 6 cut(s) 306, 374, 807, 827, 1217, 1581
MaeII ACGT 2 cut(s) 21, 815
MaeIII GTNAC 7 cut(s) 17, 25, 101, 412, 1016, 1031, 1106
MboII GAAGA 5 cut(s) 111, 139, 419, 478, 1513
MflI RGATCY 5 cut(s) 562, 756, 766, 1213, 1603
MhlI GDGCHC 1 cut(s) 36
MlsI TGGCCA 2 cut(s) 636, 1307
MluNI TGGCCA 2 cut(s) 636, 1307
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 5 cut(s) 276, 744, 801, 1608, 1680
MnlI CCTC 8 cut(s) 370, 451, 703, 747, 890, 1308, 1733, 1741
Mox20I TGGCCA 2 cut(s) 636, 1307
MscI TGGCCA 2 cut(s) 636, 1307
MseI TTAA 1 cut(s) 126
MslI CAYNNNNRTG 4 cut(s) 96, 217, 916, 922
Msp20I TGGCCA 2 cut(s) 636, 1307
MspCI CTTAAG 1 cut(s) 125
MspI CCGG 5 cut(s) 254, 384, 540, 1064, 1779
MspR9I CCNGG 7 cut(s) 84, 255, 514, 540, 638, 666, 1290
Mva1269I GAATGC 2 cut(s) 1023, 1121
MvaI CCWGG 5 cut(s) 84, 514, 638, 666, 1290
MwoI GCNNNNNNNGC 1 cut(s) 796
NciI CCSGG 2 cut(s) 255, 540
NlaIV GGNNCC 4 cut(s) 503, 768, 877, 1270
NmuCI GTSAC 2 cut(s) 412, 1106
NspI RCATGY 3 cut(s) 1014, 1459, 1778
PagI TCATGA 2 cut(s) 1345, 1785
PceI AGGCCT 1 cut(s) 584
PciI ACATGT 2 cut(s) 1010, 1455
PctI GAATGC 2 cut(s) 1023, 1121
PfeI GAWTC 6 cut(s) 189, 236, 248, 355, 1584, 1782
PfoI TCCNGGA 1 cut(s) 1288
PkrI GCNGC 2 cut(s) 520, 989
PleI GAGTC 1 cut(s) 1103
PpsI GAGTC 1 cut(s) 1103
PscI ACATGT 2 cut(s) 1010, 1455
Psp6I CCWGG 5 cut(s) 82, 512, 636, 664, 1288
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 5 cut(s) 82, 512, 636, 664, 1288
PspN4I GGNNCC 4 cut(s) 503, 768, 877, 1270
PspPI GGNCC 3 cut(s) 840, 875, 978
PstI CTGCAG 1 cut(s) 728
PstNI CAGNNNCTG 1 cut(s) 987
PsuI RGATCY 5 cut(s) 562, 756, 766, 1213, 1603
RsaI GTAC 7 cut(s) 61, 81, 573, 629, 1138, 1560, 1577
RsaNI GTAC 7 cut(s) 60, 80, 572, 628, 1137, 1559, 1576
RseI CAYNNNNRTG 4 cut(s) 96, 217, 916, 922
SaqAI TTAA 1 cut(s) 126
SatI GCNGC 2 cut(s) 519, 988
Sau96I GGNCC 3 cut(s) 840, 875, 978
ScaI AGTACT 2 cut(s) 1560, 1577
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 7 cut(s) 84, 255, 514, 540, 638, 666, 1290
SduI GDGCHC 1 cut(s) 36
SfaNI GCATC 3 cut(s) 341, 1480, 1769
SfcI CTRYAG 1 cut(s) 724
SinI GGWCC 2 cut(s) 875, 978
SmiMI CAYNNNNRTG 4 cut(s) 96, 217, 916, 922
SmlI CTYRAG 2 cut(s) 125, 1551
SmoI CTYRAG 2 cut(s) 125, 1551
SseBI AGGCCT 1 cut(s) 584
SsiI CCGC 2 cut(s) 873, 965
SspI AATATT 1 cut(s) 1177
SspMI CTAG 6 cut(s) 306, 374, 807, 827, 1217, 1581
StuI AGGCCT 1 cut(s) 584
StyD4I CCNGG 7 cut(s) 82, 253, 512, 538, 636, 664, 1288
StyI CCWWGG 1 cut(s) 178
TaaI ACNGT 4 cut(s) 31, 451, 654, 1130
TaiI ACGT 2 cut(s) 24, 818
TaqI TCGA 2 cut(s) 432, 1465
TatI WGTACW 4 cut(s) 627, 1136, 1558, 1575
TfiI GAWTC 6 cut(s) 189, 236, 248, 355, 1584, 1782
Tru1I TTAA 1 cut(s) 126
Tru9I TTAA 1 cut(s) 126
TscAI CASTG 5 cut(s) 36, 103, 280, 733, 988
TseFI GTSAC 2 cut(s) 412, 1106
TseI GCWGC 2 cut(s) 518, 987
Tsp45I GTSAC 2 cut(s) 412, 1106
TspGWI ACGGA 2 cut(s) 325, 1647
TspRI CASTG 5 cut(s) 36, 103, 280, 733, 988
Vha464I CTTAAG 1 cut(s) 125
VpaK11BI GGWCC 2 cut(s) 875, 978
XapI RAATTY 7 cut(s) 160, 197, 802, 832, 1281, 1478, 1674
XbaI TCTAGA 1 cut(s) 1580
XceI RCATGY 3 cut(s) 1014, 1459, 1778
XmiI GTMKAC 1 cut(s) 184
XspI CTAG 6 cut(s) 306, 374, 807, 827, 1217, 1581
ZrmI AGTACT 2 cut(s) 1560, 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.