Rw6G011230

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000114
Physical Location & Seq
Forward (+)
19691505 .. 19698265
6761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G011230.1

Sequence Viewer

Length: 2022 bp
ATGAATTCCTTTGTGCTTTTTCAGTCCTCTTTGATTCCTCTGCTTTTGAGCACTTCCTTTCTGTCGATCAATTTTCAATTGAGTGTGTGCGCCGATGATACAGTGGAATATGCCAACTGCAGCCAACCTATTACCTGCGGGAGCGTCAAAAGCAACATCTCTTACCCCTTTTGGGGAGCGAACCGAGCCGAATACTGTGGCAAATCTGGGTTTGAGGTCACATGCGAAGCCAACGTCCCAATGATCACCATGAGGAATATCAAGTTCAGAATTCTTGACATGGGCAATAGTAGTACTACTACAACAGCTCCTACTGTAAAAGTTGCTAGGCAGGATTACTGGGAAGATATCTGTCCCTCGACATATGTTTCAACAACCCTCGACTTCTCTCTCTTCGCATACTCTTCTGGGCTGAAGAACGTGTCTATTTGGTACGGATGCGATACAACCACAGAAGCATACTCCTCTGTGTTTCGCTGCAACAGTAGCGTCAATGCTACCTATCTCGCACCGACGAGTGGTATTGTAGTTTATCCAGTTCCTAAGGGCTGTCAATATGAGGTTTTTGTTCCGGTATTTGAATCCGCTTCTGAGGCTCTGGACAGAAATACTACTAATATTGAGACTGCGATAGATGGTGGTTTTGAATTGGATGTGCTAAATGCTGATACTGGCCTCTGCAGCAATTGCTTGGCATCAGGGGGAGTTTGTGGGCAAAGCAATACTAGTGCCAACGAATTCATGTGCTTTTGCCAGACTAATTCATCTTCCACAACCACATGTACTGAGAGCTCTTCACCCGCTCCAGGTAGAAAGCTAACCATTGTAATCGCAACAGTCTCAGCAACAGCAGGGTTGCTTGCTATAGTTTTTGGCTATTTTTTATGGAAGAAAACACTGGGAAAGAGAAGACATGTTCTAGTAATCAAAACAAACACTGAACTATCAATATTTTGGATCGTTAGCGAAACTATAAAGTATCTTAGTGCTGCTGGTGTGGAGAATGATACAGAACTACCACTATTCAGTTTGAGGAGTATATTAGTAGCTACTAATAACTTCTCTGAAGCGAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGCAGCCATAAAAAGGCTATCAAAGAAGTCCGGACAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCGAAGCTCCAACATACCAACCTTGTTAGACTCTTGGGTTGCTGCACTGAAGCAGAGGAAATGATGTTGATTTATGAGTACATGCCCAATCGAAGTTTGGACAAATTTCTGTTTGATCCATCCGAAAAGACAAAATTGGACTGGGGTAGACGTTTTAGAATTATAGAAGGTATAGCTCAAGGATTGCTTTATATACACAAGTACTCAAGATTAAAAATCATTCACAGGGATCTAAAAGCAAGTAATATTCTATTGGATGGAACAATGAACCCCAAGATTTCTGACTTTGGAATGACAAAGATTTTTGACATAAATCAAACTGAAGCAAATACTAACAGGGTTGTTGGGACCTACGGCTACATGTCACCTGAGTACGCACGTTATGGTCATTTCTCTGAGAAATCGGATGTCTTTAGTTTTGGAGTTTTGTTGTTGGAGATTGTAAGTGGAAAGAAAAATGCTAGTTTCTATCGTTTTGAACGTTCACTGACTCTCGCTGGATGGGCATGGGACCTATGGAAAGAAGGAAAGGGAATAGAGGTGATTGATGCGTCAATAAGGGAAACATTACAGGCTCATGAGGCTTTAAGGTGTATCAATATAGGACTTTTGTGCGTTCAAGAATCTGCAGCTGATCGACCTGCAATGGCATCAGTAATTCACATGTTGCAGGGAAATGAAGCTGCCTCTCTTCCACCTACCAAAGAACCTGCCTTTTCAACACAGATGAATTTCAGTACTATTGGTTCTTCTTCTCAAACATCTACCAATTATTCAAACAATGCACTTACGATTAGTTTGCCGGAAGCTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

673

Amino Acids

74.17

Weight (kDa)

5.84

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 40 - 100 2.5e-12 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 179 - 252 2.1e-12 Wall-associated receptor kinase C-terminal
Pkinase PF00069 355 - 554 1.8e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 357 - 624 4.4e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1107
Acc36I ACCTGC 3 cut(s) 143, 1855, 1924
AccBSI CCGCTC 1 cut(s) 803
AccI GTMKAC 1 cut(s) 1354
AccIII TCCGGA 1 cut(s) 1163
AciI CCGC 3 cut(s) 138, 585, 801
AclI AACGTT 1 cut(s) 1687
AclWI GGATC 3 cut(s) 965, 1316, 1443
AcsI RAATTY 5 cut(s) 4, 270, 737, 1310, 1936
AcuI CTGAAG 4 cut(s) 434, 1086, 1275, 1548
AfaI GTAC 7 cut(s) 295, 434, 784, 1286, 1409, 1580, 1945
AfiI CCNNNNNNNGG 5 cut(s) 172, 173, 518, 806, 1146
AflIII ACRYGT 5 cut(s) 420, 779, 913, 1566, 1869
AgsI TTSAA 8 cut(s) 77, 372, 581, 647, 1685, 1826, 1926, 1983
AhlI ACTAGT 1 cut(s) 725
AjnI CCWGG 1 cut(s) 805
Alw21I GWGCWC 2 cut(s) 53, 794
Alw26I GTCTC 2 cut(s) 617, 844
AlwI GGATC 3 cut(s) 965, 1316, 1443
Aor13HI TCCGGA 1 cut(s) 1163
AoxI GGCC 2 cut(s) 673, 1096
ApeKI GCWGC 8 cut(s) 120, 477, 681, 989, 1136, 1248, 1835, 1889
ApoI RAATTY 5 cut(s) 4, 270, 737, 1310, 1936
ArsI GACNNNNNNTTYG 2 cut(s) 219, 251
AspLEI GCGC 1 cut(s) 92
AspS9I GGNCC 3 cut(s) 1097, 1554, 1717
AsuHPI GGTGA 4 cut(s) 238, 789, 1563, 1759
AvaII GGWCC 2 cut(s) 1554, 1717
AxyI CCTNAGG 1 cut(s) 543
BanII GRGCYC 1 cut(s) 794
BbsI GAAGAC 1 cut(s) 916
Bbv12I GWGCWC 2 cut(s) 53, 794
BbvI GCAGC 8 cut(s) 132, 464, 693, 976, 1148, 1235, 1847, 1876
BccI CCATC 4 cut(s) 629, 1333, 1457, 1701
BceAI ACGGC 1 cut(s) 1576
BcgI CGANNNNNNTGC 2 cut(s) 1987, 2021
BciT130I CCWGG 1 cut(s) 807
BclI TGATCA 1 cut(s) 243
BcoDI GTCTC 2 cut(s) 617, 844
BcuI ACTAGT 1 cut(s) 725
BfaI CTAG 6 cut(s) 327, 726, 920, 1079, 1668, 2016
BfmI CTRYAG 4 cut(s) 118, 679, 864, 1833
BfuAI ACCTGC 3 cut(s) 143, 1855, 1924
BisI GCNGC 8 cut(s) 121, 478, 682, 990, 1137, 1249, 1836, 1890
BlsI GCNGC 8 cut(s) 122, 479, 683, 991, 1138, 1250, 1837, 1891
BmcAI AGTACT 3 cut(s) 295, 1409, 1945
Bme1390I CCNGG 1 cut(s) 807
Bme18I GGWCC 2 cut(s) 1554, 1717
BmgT120I GGNCC 3 cut(s) 1097, 1554, 1717
BmiI GGNNCC 2 cut(s) 1555, 1718
BmrFI CCNGG 1 cut(s) 807
BmrI ACTGGG 3 cut(s) 349, 908, 1357
BmsI GCATC 4 cut(s) 428, 704, 1744, 1865
BmuI ACTGGG 3 cut(s) 349, 908, 1357
BpiI GAAGAC 1 cut(s) 916
BpmI CTGGAG 1 cut(s) 789
BpuEI CTTGAG 2 cut(s) 1368, 1396
BsaWI WCCGGW 2 cut(s) 571, 1163
BsaXI ACNNNNNCTCC 2 cut(s) 292, 322
Bsc4I CCNNNNNNNGG 5 cut(s) 172, 173, 518, 806, 1146
Bse1I ACTGG 5 cut(s) 344, 536, 676, 903, 1352
Bse21I CCTNAGG 1 cut(s) 543
Bse3DI GCAATG 1 cut(s) 1857
BseAI TCCGGA 1 cut(s) 1163
BseBI CCWGG 1 cut(s) 807
BseGI GGATG 6 cut(s) 443, 658, 1325, 1468, 1618, 1712
BseLI CCNNNNNNNGG 5 cut(s) 172, 173, 518, 806, 1146
BseMI GCAATG 1 cut(s) 1857
BseMII CTCAG 5 cut(s) 582, 777, 855, 1566, 1593
BseNI ACTGG 5 cut(s) 344, 536, 676, 903, 1352
BseRI GAGGAG 2 cut(s) 454, 1048
BseXI GCAGC 8 cut(s) 132, 464, 693, 976, 1148, 1235, 1847, 1876
BsgI GTGCAG 1 cut(s) 1234
BshFI GGCC 2 cut(s) 675, 1098
BsiHKAI GWGCWC 2 cut(s) 53, 794
BsiSI CCGG 3 cut(s) 572, 1164, 2009
BslFI GGGAC 4 cut(s) 221, 339, 1567, 1730
BslI CCNNNNNNNGG 5 cut(s) 172, 173, 518, 806, 1146
BsmAI GTCTC 2 cut(s) 617, 844
BsmFI GGGAC 4 cut(s) 221, 339, 1567, 1730
BsnI GGCC 2 cut(s) 675, 1098
Bsp1286I GDGCHC 2 cut(s) 53, 794
Bsp13I TCCGGA 1 cut(s) 1163
Bsp143I GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
BspACI CCGC 3 cut(s) 138, 585, 801
BspANI GGCC 2 cut(s) 675, 1098
BspCNI CTCAG 5 cut(s) 583, 778, 854, 1567, 1594
BspEI TCCGGA 1 cut(s) 1163
BspHI TCATGA 2 cut(s) 1185, 1783
BspLI GGNNCC 2 cut(s) 1555, 1718
BspMAI CTGCAG 3 cut(s) 122, 683, 1837
BspMI ACCTGC 3 cut(s) 143, 1855, 1924
BspPI GGATC 3 cut(s) 965, 1316, 1443
BspQI GCTCTTC 1 cut(s) 799
BsrBI CCGCTC 1 cut(s) 803
BsrDI GCAATG 1 cut(s) 1857
BsrI ACTGG 5 cut(s) 344, 536, 676, 903, 1352
BssMI GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
Bst2UI CCWGG 1 cut(s) 807
Bst4CI ACNGT 5 cut(s) 103, 197, 316, 485, 838
Bst6I CTCTTC 4 cut(s) 398, 409, 799, 1902
BstAPI GCANNNNNTGC 1 cut(s) 687
BstC8I GCNNGC 1 cut(s) 861
BstDEI CTNAG 7 cut(s) 543, 591, 786, 841, 983, 1575, 1602
BstF5I GGATG 6 cut(s) 443, 658, 1325, 1468, 1618, 1712
BstHHI GCGC 1 cut(s) 92
BstKTI GATC 6 cut(s) 69, 246, 960, 1324, 1438, 1843
BstMAI GTCTC 2 cut(s) 617, 844
BstMBI GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
BstMWI GCNNNNNNNGC 8 cut(s) 150, 185, 486, 593, 681, 687, 1709, 1787
BstNI CCWGG 1 cut(s) 807
BstNSI RCATGY 6 cut(s) 225, 783, 917, 1291, 1570, 1873
BstSCI CCNGG 1 cut(s) 805
BstSFI CTRYAG 4 cut(s) 118, 679, 864, 1833
BstV1I GCAGC 8 cut(s) 132, 464, 693, 976, 1148, 1235, 1847, 1876
BstV2I GAAGAC 1 cut(s) 916
BstX2I RGATCY 1 cut(s) 1435
BstYI RGATCY 1 cut(s) 1435
Bsu36I CCTNAGG 1 cut(s) 543
BsuRI GGCC 2 cut(s) 675, 1098
BtsCI GGATG 6 cut(s) 443, 658, 1325, 1468, 1618, 1712
BtsIMutI CAGTG 5 cut(s) 108, 896, 936, 1251, 1691
BveI ACCTGC 3 cut(s) 143, 1855, 1924
Cac8I GCNNGC 1 cut(s) 861
CciI TCATGA 2 cut(s) 1185, 1783
CfoI GCGC 1 cut(s) 92
Cfr13I GGNCC 3 cut(s) 1097, 1554, 1717
CseI GACGC 3 cut(s) 133, 478, 1746
Csp6I GTAC 7 cut(s) 294, 433, 783, 1285, 1408, 1579, 1944
CviQI GTAC 7 cut(s) 294, 433, 783, 1285, 1408, 1579, 1944
DdeI CTNAG 7 cut(s) 543, 591, 786, 841, 983, 1575, 1602
DpnI GATC 6 cut(s) 68, 245, 959, 1323, 1437, 1842
DpnII GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
Eam1104I CTCTTC 4 cut(s) 398, 409, 799, 1902
EarI CTCTTC 4 cut(s) 398, 409, 799, 1902
Ecl136II GAGCTC 1 cut(s) 792
Eco24I GRGCYC 1 cut(s) 794
Eco32I GATATC 1 cut(s) 349
Eco47I GGWCC 2 cut(s) 1554, 1717
Eco53kI GAGCTC 1 cut(s) 792
Eco57I CTGAAG 4 cut(s) 434, 1086, 1275, 1548
Eco81I CCTNAGG 1 cut(s) 543
EcoICRI GAGCTC 1 cut(s) 792
EcoO109I RGGNCCY 2 cut(s) 1554, 1717
EcoRI GAATTC 3 cut(s) 4, 270, 737
EcoRII CCWGG 1 cut(s) 805
EcoRV GATATC 1 cut(s) 349
EcoT38I GRGCYC 1 cut(s) 794
FalI AAGNNNNNCTT 2 cut(s) 1377, 1409
FaqI GGGAC 4 cut(s) 221, 339, 1567, 1730
FauI CCCGC 2 cut(s) 131, 808
FauNDI CATATG 1 cut(s) 364
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 1 cut(s) 1354
Fnu4HI GCNGC 8 cut(s) 121, 478, 682, 990, 1137, 1249, 1836, 1890
FokI GGATG 6 cut(s) 450, 665, 1312, 1475, 1625, 1719
FriOI GRGCYC 1 cut(s) 794
Fsp4HI GCNGC 8 cut(s) 121, 478, 682, 990, 1137, 1249, 1836, 1890
FspBI CTAG 6 cut(s) 327, 726, 920, 1079, 1668, 2016
GlaI GCGC 1 cut(s) 91
GluI GCNGC 8 cut(s) 121, 478, 682, 990, 1137, 1249, 1836, 1890
GsuI CTGGAG 1 cut(s) 789
HaeIII GGCC 2 cut(s) 675, 1098
HapII CCGG 3 cut(s) 572, 1164, 2009
HgaI GACGC 3 cut(s) 133, 478, 1746
HhaI GCGC 1 cut(s) 92
Hin6I GCGC 1 cut(s) 90
HinP1I GCGC 1 cut(s) 90
HindIII AAGCTT 1 cut(s) 1199
HinfI GANTC 6 cut(s) 34, 581, 1092, 1236, 1696, 1829
HpaII CCGG 3 cut(s) 572, 1164, 2009
HphI GGTGA 4 cut(s) 238, 789, 1563, 1759
Hpy166II GTNNAC 2 cut(s) 1355, 1691
Hpy188I TCNGA 7 cut(s) 269, 592, 1066, 1330, 1489, 1603, 1612
Hpy188III TCNNGA 8 cut(s) 275, 599, 1130, 1164, 1186, 1413, 1784, 1826
Hpy8I GTNNAC 2 cut(s) 1355, 1691
Hpy99I CGWCG 1 cut(s) 517
HpyAV CCTTC 2 cut(s) 1367, 1724
HpyCH4III ACNGT 5 cut(s) 103, 197, 316, 485, 838
HpyCH4IV ACGT 5 cut(s) 234, 420, 1357, 1585, 1687
HpyCH4V TGCA 8 cut(s) 120, 480, 681, 1251, 1835, 1850, 1876, 1991
HpyF10VI GCNNNNNNNGC 8 cut(s) 150, 185, 486, 593, 681, 687, 1709, 1787
HpyF3I CTNAG 7 cut(s) 543, 591, 786, 841, 983, 1575, 1602
HpySE526I ACGT 5 cut(s) 234, 420, 1357, 1585, 1687
HspAI GCGC 1 cut(s) 90
Kpn2I TCCGGA 1 cut(s) 1163
Ksp22I TGATCA 1 cut(s) 243
Kzo9I GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
LguI GCTCTTC 1 cut(s) 799
LmnI GCTCC 5 cut(s) 141, 176, 313, 808, 1218
Lsp1109I GCAGC 8 cut(s) 132, 464, 693, 976, 1148, 1235, 1847, 1876
LweI GCATC 4 cut(s) 428, 704, 1744, 1865
MaeI CTAG 6 cut(s) 327, 726, 920, 1079, 1668, 2016
MaeII ACGT 5 cut(s) 234, 420, 1357, 1585, 1687
MaeIII GTNAC 2 cut(s) 217, 1569
MalI GATC 6 cut(s) 68, 245, 959, 1323, 1437, 1842
MbiI CCGCTC 1 cut(s) 803
MboI GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
MfeI CAATTG 2 cut(s) 77, 685
MflI RGATCY 1 cut(s) 1435
MhlI GDGCHC 2 cut(s) 53, 794
MlyI GAGTC 2 cut(s) 1230, 1690
MmeI TCCRAC 2 cut(s) 1240, 1620
MroI TCCGGA 1 cut(s) 1163
MseI TTAA 3 cut(s) 1196, 1418, 1793
MspA1I CMGCKG 1 cut(s) 1838
MspI CCGG 3 cut(s) 572, 1164, 2009
MspR9I CCNGG 1 cut(s) 807
MunI CAATTG 2 cut(s) 77, 685
MvaI CCWGG 1 cut(s) 807
MwoI GCNNNNNNNGC 8 cut(s) 150, 185, 486, 593, 681, 687, 1709, 1787
NdeI CATATG 1 cut(s) 364
NdeII GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
NlaIV GGNNCC 2 cut(s) 1555, 1718
NmuCI GTSAC 2 cut(s) 217, 1569
NspI RCATGY 6 cut(s) 225, 783, 917, 1291, 1570, 1873
PagI TCATGA 2 cut(s) 1185, 1783
PciI ACATGT 4 cut(s) 779, 913, 1566, 1869
PciSI GCTCTTC 1 cut(s) 799
PcsI WCGNNNNNNNCGW 1 cut(s) 1684
PfeI GAWTC 4 cut(s) 34, 581, 1092, 1829
PkrI GCNGC 8 cut(s) 122, 479, 683, 991, 1138, 1250, 1837, 1891
PleI GAGTC 2 cut(s) 1230, 1690
PpsI GAGTC 2 cut(s) 1230, 1690
PpuMI RGGWCCY 2 cut(s) 1554, 1717
PscI ACATGT 4 cut(s) 779, 913, 1566, 1869
PsiI TTATAA 1 cut(s) 1107
Psp124BI GAGCTC 1 cut(s) 794
Psp1406I AACGTT 1 cut(s) 1687
Psp5II RGGWCCY 2 cut(s) 1554, 1717
Psp6I CCWGG 1 cut(s) 805
PspGI CCWGG 1 cut(s) 805
PspN4I GGNNCC 2 cut(s) 1555, 1718
PspPI GGNCC 3 cut(s) 1097, 1554, 1717
PspPPI RGGWCCY 2 cut(s) 1554, 1717
PsrI GAACNNNNNNTAC 2 cut(s) 1936, 1968
PstI CTGCAG 3 cut(s) 122, 683, 1837
PsuI RGATCY 1 cut(s) 1435
PvuII CAGCTG 1 cut(s) 1838
RsaI GTAC 7 cut(s) 295, 434, 784, 1286, 1409, 1580, 1945
RsaNI GTAC 7 cut(s) 294, 433, 783, 1285, 1408, 1579, 1944
SacI GAGCTC 1 cut(s) 794
SapI GCTCTTC 1 cut(s) 799
SaqAI TTAA 3 cut(s) 1196, 1418, 1793
SatI GCNGC 8 cut(s) 121, 478, 682, 990, 1137, 1249, 1836, 1890
Sau3AI GATC 6 cut(s) 66, 243, 957, 1321, 1435, 1840
Sau96I GGNCC 3 cut(s) 1097, 1554, 1717
ScaI AGTACT 3 cut(s) 295, 1409, 1945
SchI GAGTC 2 cut(s) 1230, 1690
ScrFI CCNGG 1 cut(s) 807
SduI GDGCHC 2 cut(s) 53, 794
SfaNI GCATC 4 cut(s) 428, 704, 1744, 1865
SfcI CTRYAG 4 cut(s) 118, 679, 864, 1833
SinI GGWCC 2 cut(s) 1554, 1717
SmlI CTYRAG 2 cut(s) 1383, 1411
SmoI CTYRAG 2 cut(s) 1383, 1411
SpeI ACTAGT 1 cut(s) 725
SsiI CCGC 3 cut(s) 138, 585, 801
SspI AATATT 3 cut(s) 619, 951, 1453
SspMI CTAG 6 cut(s) 327, 726, 920, 1079, 1668, 2016
SstI GAGCTC 1 cut(s) 794
StyD4I CCNGG 1 cut(s) 805
TaaI ACNGT 5 cut(s) 103, 197, 316, 485, 838
TaiI ACGT 5 cut(s) 237, 423, 1360, 1588, 1690
TaqI TCGA 5 cut(s) 65, 359, 381, 1297, 1843
TatI WGTACW 5 cut(s) 293, 782, 1284, 1407, 1943
TfiI GAWTC 4 cut(s) 34, 581, 1092, 1829
Tru1I TTAA 3 cut(s) 1196, 1418, 1793
Tru9I TTAA 3 cut(s) 1196, 1418, 1793
TscAI CASTG 5 cut(s) 108, 903, 943, 1258, 1698
TseFI GTSAC 2 cut(s) 217, 1569
TseI GCWGC 8 cut(s) 120, 477, 681, 989, 1136, 1248, 1835, 1889
Tsp45I GTSAC 2 cut(s) 217, 1569
TspDTI ATGAA 8 cut(s) 17, 730, 753, 1174, 1202, 1487, 1899, 1949
TspGWI ACGGA 1 cut(s) 450
TspRI CASTG 5 cut(s) 108, 903, 943, 1258, 1698
VpaK11BI GGWCC 2 cut(s) 1554, 1717
XapI RAATTY 5 cut(s) 4, 270, 737, 1310, 1936
XceI RCATGY 6 cut(s) 225, 783, 917, 1291, 1570, 1873
XcmI CCANNNNNNNNNTGG 1 cut(s) 1300
XmiI GTMKAC 1 cut(s) 1354
XspI CTAG 6 cut(s) 327, 726, 920, 1079, 1668, 2016
ZrmI AGTACT 3 cut(s) 295, 1409, 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.