pycom17g25110

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
23263060 .. 23263713
654 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g25110.1

Sequence Viewer

Length: 654 bp
ATGCCTAGACAACGTCCCTGTGTTCAACATGGTGGGTACGAGGCTACGAGCTATAGAATTCTGCAAATGAACACTACTAATCCTCGGACCGTTAAGGTTGCTAGGAACGATTACTGGGGTAGTATCTGTAATCCGAATTTCGTCAACACCACCCTCAACTTCTCTCTGTTTGATTATGTTTCTACTTATACAAACATGACGTTTTACTACCAATGCCCTACCACCACAACGCTTCCTAATTTTCAGTCCTGCTACACAAGCTCTGTTTTCTATTTGACACGTCCGGTGAGAGTTGGTCAGCCATCTTCTGTGAGCTGTACATATGAGGTTATTGTTCCCGTTTATACAACAGCTGCTCTTGCTATAGAGGCCGGTCAAACAACTACGATGACCGATGCGGTAGACGGGGGTTTCTCACTGCAATTGCAGATTGACAACGATCAATGCGACAAATGTTTGGAATCAGGAGGACAGTGTGGGCTTAACACTAGTACTAATTCTGGATTCAGTTGCTTTTGCGCAGATCAAGCCTATGCATCCACATGTAATGGAACTAGTAATTCAAGTCAAAACGGAGGTACGTCTGTCCCTTGTCATTCTCATGTAAATAACAAATTTGGAACTCCTAGCTTGCTTTTTGTTTTAGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

218

Amino Acids

23.71

Weight (kDa)

5.2

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAK_assoc PF14380 99 - 176 5.4e-14 Wall-associated receptor kinase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000114)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_1g07120 FvH4_4g01160 FvH4_6g34940 FvH4_6g44062 FvH4_6g44106 FvH4_6g44106 FvH4_6g44106 FvH4_6g44107 FvH4_6g44107 FvH4_6g44109 FvH4_6g44140 FvH4_6g44190 FvH4_6g44200 FvH4_6g44240 FvH4_6g44241 FvH4_6g44242
malus_domestica MD09G1094900.v1.1 MD09G1100300.v1.1 MD09G1100400.v1.1 MD09G1100600.v1.1 MD09G1100800.v1.1 MD09G1100900.v1.1 MD09G1101300.v1.1 MD09G1255200.v1.1 MD17G1088400.v1.1 MD17G1088600.v1.1 MD17G1247900.v1.1 MD17G1248300.v1.1
prunus_persica Prupe.1G497000_v2.0.a1 Prupe.2G033300_v2.0.a1 Prupe.3G145500_v2.0.a1 Prupe.3G225400_v2.0.a1 Prupe.3G225700_v2.0.a1 Prupe.3G225700_v2.0.a1
pyrus_communis pycom06g12720 pycom06g12740 pycom09g01960 pycom09g02450 pycom17g08520 pycom17g08530 pycom17g08560 pycom17g24950 pycom17g25030 pycom17g25110 pycom17g25260 pycom17g25290
rosa_chinensis RchiOBHm_Chr1g0326521 RchiOBHm_Chr1g0326551 RchiOBHm_Chr1g0326591 RchiOBHm_Chr1g0328741 RchiOBHm_Chr1g0329371 RchiOBHm_Chr2g0145911 RchiOBHm_Chr2g0160891 RchiOBHm_Chr2g0160921 RchiOBHm_Chr2g0161001 RchiOBHm_Chr2g0161011 RchiOBHm_Chr2g0161431 RchiOBHm_Chr2g0165121 RchiOBHm_Chr2g0166301 RchiOBHm_Chr4g0399551 RchiOBHm_Chr4g0405681 RchiOBHm_Chr5g0066741 RchiOBHm_Chr5g0066841 RchiOBHm_Chr6g0273021 RchiOBHm_Chr7g0225151
rosa_laevigata RLG00000001843 RLG00000008827 RLG00000014283 RLG00000014284 RLG00000020173 RLG00000021244 RLG00000021246 RLG00000021248 RLG00000021283 RLG00000023606 RLG00000029921 RLG00000030066 RLG00000030067 RLG00000033456
rosa_multiflora Rmu_co7958161.1_g000001 Rmu_co8440151.1_g000001 Rmu_co8454989.1_g000001 Rmu_sc0000129.1_g000018 Rmu_sc0000322.1_g000011 Rmu_sc0000322.1_g000045 Rmu_sc0000605.1_g000051 Rmu_sc0000955.1_g000015 Rmu_sc0000955.1_g000020 Rmu_sc0001188.1_g000017 Rmu_sc0001188.1_g000019 Rmu_sc0001355.1_g000015 Rmu_sc0001702.1_g000005 Rmu_sc0001702.1_g000006 Rmu_sc0001702.1_g000007 Rmu_sc0001702.1_g000008 Rmu_sc0001702.1_g000009 Rmu_sc0001702.1_g000010 Rmu_sc0001702.1_g000011 Rmu_sc0001702.1_g000012 Rmu_sc0001702.1_g000013 Rmu_sc0001702.1_g000014 Rmu_sc0001702.1_g000015 Rmu_sc0001702.1_g000016 Rmu_sc0002473.1_g000012 Rmu_sc0002473.1_g000015 Rmu_sc0002773.1_g000029 Rmu_sc0004178.1_g000002 Rmu_sc0005189.1_g000006 Rmu_sc0005860.1_g000004 Rmu_sc0009205.1_g000005 Rmu_sc0009205.1_g000007 Rmu_sc0009205.1_g000023 Rmu_sc0009472.1_g000005 Rmu_sc0009858.1_g000015 Rmu_sc0020187.1_g000001
rosa_roxburghii Rroxscaffold_176G00431460 Rroxscaffold_176G00431480 Rroxscaffold_1G00014330 Rroxscaffold_1G00031590 Rroxscaffold_2G00088820 Rroxscaffold_2G00089330 Rroxscaffold_2G00089360 Rroxscaffold_2G00089370 Rroxscaffold_2G00089380 Rroxscaffold_2G00100370 Rroxscaffold_2G00100380 Rroxscaffold_4G00321410 Rroxscaffold_4G00323700 Rroxscaffold_4G00327640 Rroxscaffold_4G00327650 Rroxscaffold_5G00344450 Rroxscaffold_7G00202770 Rroxscaffold_7G00203450 Rroxscaffold_7G00203540
rosa_rugosa Rorug01G0061100 Rorug02G0482100 Rorug02G0485900 Rorug02G0485900 Rorug02G0489500 Rorug02G0489600 Rorug02G0489700 Rorug04G0016600 Rorug04G0016700 Rorug05G0379000 Rorug05G0516700 Rorug06G0007900 Rorug06G0009300
rosa_samantha Rh1AG076700 Rh1AG076800 Rh1AG077000 Rh1AG077300 Rh1AG094400 Rh1AG097500 Rh1AG402000 Rh1BG062700 Rh1BG062900 Rh1CG075500 Rh1CG075600 Rh1CG075800 Rh1CG090900 Rh1CG091400 Rh1CG091600 Rh1CG094100 Rh1DG082300 Rh1DG082500 Rh1DG097400 Rh2AG448200 Rh2AG448300 Rh2AG511600 Rh2AG547500 Rh2AG551400 Rh2AG551700 Rh2AG555800 Rh2AG588000 Rh2BG565900 Rh2BG566000 Rh2BG566300 Rh2BG569000 Rh2BG600000 Rh2CG435200 Rh2CG435300 Rh2CG496600 Rh2CG535400 Rh2CG535600 Rh2CG539700 Rh2CG562700 Rh2CG570900 Rh2DG574600 Rh2DG574800 Rh2DG578600 Rh2DG610200 Rh4CG140900 Rh4DG127800 Rh5AG438500 Rh5BG436500 Rh5BG455500 Rh5CG477600 Rh5DG470300 Rh6AG129500 Rh6AG129900 Rh6BG125700 Rh6BG126000 Rh6BG126700 Rh6BG126800 Rh6CG124500 Rh6CG124800 Rh6CG125200 Rh6CG125300 Rh6DG111400 Rh6DG111700 Rh6DG111800 Rh7DG373300
rosa_wichuraiana Rw0G014010 Rw1G006140 Rw1G006160 Rw1G006180 Rw1G006190 Rw1G007340 Rw1G007360 Rw2G045660 Rw2G045670 Rw2G045970 Rw2G048220 Rw4G010820 Rw5G041010 Rw6G011220 Rw6G011230 Rw7G031490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 520
AccI GTMKAC 1 cut(s) 402
AciI CCGC 1 cut(s) 398
AcsI RAATTY 3 cut(s) 57, 136, 614
AfaI GTAC 4 cut(s) 38, 319, 493, 580
AflIII ACRYGT 2 cut(s) 278, 542
AgsI TTSAA 2 cut(s) 26, 564
AhlI ACTAGT 2 cut(s) 488, 554
AjiI CACGTC 1 cut(s) 281
AluBI AGCT 5 cut(s) 51, 261, 315, 353, 630
AluI AGCT 5 cut(s) 51, 261, 315, 353, 630
AoxI GGCC 1 cut(s) 369
ApeKI GCWGC 1 cut(s) 353
ApoI RAATTY 3 cut(s) 57, 136, 614
AspLEI GCGC 1 cut(s) 521
AspS9I GGNCC 1 cut(s) 87
AsuHPI GGTGA 1 cut(s) 298
AvaII GGWCC 1 cut(s) 87
BaeI ACNNNNGTAYC 2 cut(s) 570, 603
BbvI GCAGC 1 cut(s) 340
BccI CCATC 1 cut(s) 310
BcuI ACTAGT 2 cut(s) 488, 554
BfaI CTAG 5 cut(s) 6, 102, 489, 555, 627
BfmI CTRYAG 2 cut(s) 52, 363
BisI GCNGC 1 cut(s) 354
BlsI GCNGC 1 cut(s) 355
BmcAI AGTACT 1 cut(s) 493
Bme18I GGWCC 1 cut(s) 87
BmgBI CACGTC 1 cut(s) 281
BmgT120I GGNCC 1 cut(s) 87
BmrI ACTGGG 1 cut(s) 124
BmsI GCATC 2 cut(s) 385, 545
BmuI ACTGGG 1 cut(s) 124
BsaJI CCNNGG 1 cut(s) 83
BsaWI WCCGGW 1 cut(s) 283
Bse118I RCCGGY 1 cut(s) 371
Bse1I ACTGG 1 cut(s) 119
BseDI CCNNGG 1 cut(s) 83
BseGI GGATG 1 cut(s) 536
BseNI ACTGG 1 cut(s) 119
BseXI GCAGC 1 cut(s) 340
BshFI GGCC 1 cut(s) 371
BsiSI CCGG 2 cut(s) 284, 372
BslFI GGGAC 1 cut(s) 572
BsmFI GGGAC 1 cut(s) 572
BsnI GGCC 1 cut(s) 371
Bsp1407I TGTACA 1 cut(s) 317
Bsp143I GATC 2 cut(s) 439, 523
BspACI CCGC 1 cut(s) 398
BspANI GGCC 1 cut(s) 371
BsrFI RCCGGY 1 cut(s) 371
BsrGI TGTACA 1 cut(s) 317
BsrI ACTGG 1 cut(s) 119
BssAI RCCGGY 1 cut(s) 371
BssECI CCNNGG 1 cut(s) 83
BssMI GATC 2 cut(s) 439, 523
Bst4CI ACNGT 2 cut(s) 91, 474
BstAUI TGTACA 1 cut(s) 317
BstC8I GCNNGC 1 cut(s) 632
BstF5I GGATG 1 cut(s) 536
BstHHI GCGC 1 cut(s) 521
BstKTI GATC 2 cut(s) 442, 526
BstMBI GATC 2 cut(s) 439, 523
BstMWI GCNNNNNNNGC 4 cut(s) 258, 359, 368, 527
BstNSI RCATGY 1 cut(s) 546
BstSFI CTRYAG 2 cut(s) 52, 363
BstV1I GCAGC 1 cut(s) 340
BsuRI GGCC 1 cut(s) 371
BtrI CACGTC 1 cut(s) 281
BtsCI GGATG 1 cut(s) 536
BtsI GCAGTG 1 cut(s) 416
BtsIMutI CAGTG 2 cut(s) 416, 479
Cac8I GCNNGC 1 cut(s) 632
CfoI GCGC 1 cut(s) 521
Cfr10I RCCGGY 1 cut(s) 371
Cfr13I GGNCC 1 cut(s) 87
CpoI CGGWCCG 1 cut(s) 87
Csp6I GTAC 4 cut(s) 37, 318, 492, 579
CspI CGGWCCG 1 cut(s) 87
CviAII CATG 4 cut(s) 29, 196, 543, 602
CviQI GTAC 4 cut(s) 37, 318, 492, 579
DpnI GATC 2 cut(s) 441, 525
DpnII GATC 2 cut(s) 439, 523
Eco47I GGWCC 1 cut(s) 87
EcoRI GAATTC 1 cut(s) 57
EcoT22I ATGCAT 1 cut(s) 538
FaeI CATG 4 cut(s) 32, 199, 546, 605
FaqI GGGAC 1 cut(s) 572
FatI CATG 4 cut(s) 28, 195, 542, 601
FauNDI CATATG 1 cut(s) 322
FblI GTMKAC 1 cut(s) 402
Fnu4HI GCNGC 1 cut(s) 354
FokI GGATG 1 cut(s) 523
Fsp4HI GCNGC 1 cut(s) 354
FspBI CTAG 5 cut(s) 6, 102, 489, 555, 627
FspI TGCGCA 1 cut(s) 520
GlaI GCGC 1 cut(s) 520
GluI GCNGC 1 cut(s) 354
HaeIII GGCC 1 cut(s) 371
HapII CCGG 2 cut(s) 284, 372
HhaI GCGC 1 cut(s) 521
Hin1II CATG 4 cut(s) 32, 199, 546, 605
Hin6I GCGC 1 cut(s) 519
HinP1I GCGC 1 cut(s) 519
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HinfI GANTC 2 cut(s) 461, 504
HpaII CCGG 2 cut(s) 284, 372
HphI GGTGA 1 cut(s) 298
Hpy166II GTNNAC 2 cut(s) 145, 403
Hpy188I TCNGA 2 cut(s) 87, 135
Hpy188III TCNNGA 2 cut(s) 465, 501
Hpy8I GTNNAC 2 cut(s) 145, 403
HpyCH4III ACNGT 2 cut(s) 91, 474
HpyCH4IV ACGT 4 cut(s) 13, 200, 280, 581
HpyCH4V TGCA 4 cut(s) 64, 421, 427, 536
HpyF10VI GCNNNNNNNGC 4 cut(s) 258, 359, 368, 527
HpySE526I ACGT 4 cut(s) 13, 200, 280, 581
Hsp92II CATG 4 cut(s) 32, 199, 546, 605
HspAI GCGC 1 cut(s) 519
Kzo9I GATC 2 cut(s) 439, 523
LpnPI CCDG 7 cut(s) 31, 100, 262, 297, 385, 450, 486
Lsp1109I GCAGC 1 cut(s) 340
LweI GCATC 2 cut(s) 385, 545
MaeI CTAG 5 cut(s) 6, 102, 489, 555, 627
MaeII ACGT 4 cut(s) 13, 200, 280, 581
MalI GATC 2 cut(s) 441, 525
MboI GATC 2 cut(s) 439, 523
MboII GAAGA 1 cut(s) 297
MfeI CAATTG 1 cut(s) 422
MluCI AATT 7 cut(s) 57, 136, 238, 422, 496, 559, 614
MnlI CCTC 7 cut(s) 34, 93, 164, 319, 361, 461, 569
Mph1103I ATGCAT 1 cut(s) 538
MseI TTAA 2 cut(s) 93, 483
MslI CAYNNNNRTG 2 cut(s) 541, 600
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 2 cut(s) 284, 372
MunI CAATTG 1 cut(s) 422
MwoI GCNNNNNNNGC 4 cut(s) 258, 359, 368, 527
NdeI CATATG 1 cut(s) 322
NdeII GATC 2 cut(s) 439, 523
NlaIII CATG 4 cut(s) 32, 199, 546, 605
NsbI TGCGCA 1 cut(s) 520
NsiI ATGCAT 1 cut(s) 538
NspI RCATGY 1 cut(s) 546
PciI ACATGT 1 cut(s) 542
PcsI WCGNNNNNNNCGW 1 cut(s) 444
PfeI GAWTC 2 cut(s) 461, 504
PflFI GACNNNGTC 1 cut(s) 12
PkrI GCNGC 1 cut(s) 355
PscI ACATGT 1 cut(s) 542
PspPI GGNCC 1 cut(s) 87
PsyI GACNNNGTC 1 cut(s) 12
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 4 cut(s) 38, 319, 493, 580
RsaNI GTAC 4 cut(s) 37, 318, 492, 579
RseI CAYNNNNRTG 2 cut(s) 541, 600
Rsr2I CGGWCCG 1 cut(s) 87
RsrII CGGWCCG 1 cut(s) 87
SaqAI TTAA 2 cut(s) 93, 483
SatI GCNGC 1 cut(s) 354
Sau3AI GATC 2 cut(s) 439, 523
Sau96I GGNCC 1 cut(s) 87
ScaI AGTACT 1 cut(s) 493
SfaNI GCATC 2 cut(s) 385, 545
SfcI CTRYAG 2 cut(s) 52, 363
SinI GGWCC 1 cut(s) 87
SmiMI CAYNNNNRTG 2 cut(s) 541, 600
SpeI ACTAGT 2 cut(s) 488, 554
Sse9I AATT 7 cut(s) 57, 136, 238, 422, 496, 559, 614
SsiI CCGC 1 cut(s) 398
SspMI CTAG 5 cut(s) 6, 102, 489, 555, 627
TaaI ACNGT 2 cut(s) 91, 474
TaiI ACGT 4 cut(s) 16, 203, 283, 584
TaqII GACCGA 1 cut(s) 407
TasI AATT 7 cut(s) 57, 136, 238, 422, 496, 559, 614
TatI WGTACW 2 cut(s) 317, 491
TfiI GAWTC 2 cut(s) 461, 504
Tru1I TTAA 2 cut(s) 93, 483
Tru9I TTAA 2 cut(s) 93, 483
TscAI CASTG 2 cut(s) 423, 479
TseI GCWGC 1 cut(s) 353
TspDTI ATGAA 1 cut(s) 83
TspGWI ACGGA 1 cut(s) 588
TspRI CASTG 2 cut(s) 423, 479
Tth111I GACNNNGTC 1 cut(s) 12
VpaK11BI GGWCC 1 cut(s) 87
XapI RAATTY 3 cut(s) 57, 136, 614
XceI RCATGY 1 cut(s) 546
XmiI GTMKAC 1 cut(s) 402
XspI CTAG 5 cut(s) 6, 102, 489, 555, 627
ZrmI AGTACT 1 cut(s) 493
Zsp2I ATGCAT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.