FvH4_6g25920

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000195
Physical Location & Seq
Reverse (-)
19822741 .. 19826171
3431 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g25920.t1

Sequence Viewer

Length: 1386 bp
ATGGCTTGGAATGGTATTCTGGACACAAGGGACCTAATCATTAAAGGTATGCGATGGATTGTAGGTGATGGTAAGTCAATTAACTTTTGCTGTTTTAACTGGGTCTTTGATCATCCTCTTGTCGAACTTATTCCTACCCATCTTAGGAATAACATTAACTTAGATGAGCTAGTGAGCGATTACTTTAATGAAAATGGCTGGAACACTGTAAAGCTGAGGAGTTTTCTTGATGAGAACATTGTGAAGGAAATTCTTGGGGTGCCTATTCCCACTAATCCCTCTGCAGATGAGTGCGTTTGGGGCACTGCTCAGCATGTTTGGAAAACCAGAAACGATACCATTTTTCGGGGCAAACAGCCTAATCCTAGATCGACTCTTGCTGCTGCAATGAGCCACCTCCAGAATTCGGCCAATCTTTGCACAGTCAGGAGTACTTATCAAACTATGAGAATGATATCTGATAAGAAACCCTCTTGGAAACCCCTTGCTGCAGCTTCTTTCAAGTTTTCAACAGGCTATAATGAGACGAATAATTATGATGATGATAGTGATGGTGATGTACAAGAAAGTGAGCTTGGTTATGAGAGTTCAAATGCAAGTGAGGTGAGAGACTACTCTTCTACGGAATGGGTGGAATATTGGAAATGTAGGCTTCCTAATAGTGGAGAGCTACTTGAAGATGATTCCGAAGAGGAGGATGCCTTGTCTTATGTGGAGGATGAGTCCTTGTTTAGTGAAGAGGATACGAAGCTTGAGGTCCTACACTACAATCCCTTGTTTATTGAGGCGGGATTTGAGCAAGATTTGGAGGATGAATTGTCAAATGAGGAGGATGTGGAGCTTCAATTCATATATCACAATCCTTTATTCATTGAGGGTGATGTTCCCAAAGAGGAGGAGAGTTCTTTGGTGCCTTGTGATGATAAAGATGTTGAAGAGTCTAGGACTTTCTCTCCTCCCACACCCATGGAGATCCATCATGAGCTTCCCAAGGTGAATTGTAGAACCTTGAGCATATTTGTACTTAATGAGAAGATTGAGCTTGAGGTGATCTTACCTCTCAATCCACCTTTAAGTGGTCTATGGTTCTACAATGAGGTAATAGATTGGAAAGGAAATGGAGCTCTTGTGATCAAACTTCCCCATCACTTCCAAGAGCCTCTACCACCTATTGTTCCTATGAGCACCATTTCTACATCTATCTTGAAGGAGAAGGTAAGGATGGCTCCTCAAAGTAGAATTGAGAAGAGGAAAGCTAAGAGGCTACTCTTTTGGCCTCAAATTGGAGTATTCTTTTGTAGCTCCTGGTCATGCCTCTATGATATGTCAAGGGGTCCCTTAGCCCCTAACAATAGGGTGGTCGCACTTGAGAAGTATCCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

462

Amino Acids

52.93

Weight (kDa)

4.66

Isoelectric Point (pI)

53.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000195)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g25780 FvH4_6g25920
rosa_chinensis RchiOBHm_Chr1g0366971 RchiOBHm_Chr1g0372841 RchiOBHm_Chr2g0146841 RchiOBHm_Chr2g0154821 RchiOBHm_Chr2g0159611 RchiOBHm_Chr3g0452071 RchiOBHm_Chr3g0453731 RchiOBHm_Chr3g0457891 RchiOBHm_Chr3g0471041 RchiOBHm_Chr3g0473741 RchiOBHm_Chr4g0427761 RchiOBHm_Chr5g0041301 RchiOBHm_Chr5g0076511 RchiOBHm_Chr6g0281431 RchiOBHm_Chr7g0180511
rosa_multiflora Rmu_sc0000082.1_g000052 Rmu_sc0000125.1_g000058 Rmu_sc0000147.1_g000108 Rmu_sc0000210.1_g000011 Rmu_sc0000229.1_g000006 Rmu_sc0000245.1_g000013 Rmu_sc0000897.1_g000016 Rmu_sc0001059.1_g000005 Rmu_sc0001336.1_g000059 Rmu_sc0001464.1_g000025 Rmu_sc0001630.1_g000013 Rmu_sc0001790.1_g000012 Rmu_sc0001939.1_g000003 Rmu_sc0002132.1_g000013 Rmu_sc0002235.1_g000008 Rmu_sc0002235.1_g000022 Rmu_sc0002548.1_g000030 Rmu_sc0002564.1_g000018 Rmu_sc0002652.1_g000001 Rmu_sc0002759.1_g000007 Rmu_sc0002759.1_g000011 Rmu_sc0002799.1_g000012 Rmu_sc0002858.1_g000033 Rmu_sc0002882.1_g000041 Rmu_sc0003032.1_g000030 Rmu_sc0003033.1_g000041 Rmu_sc0003044.1_g000038 Rmu_sc0003072.1_g000004 Rmu_sc0003264.1_g000025 Rmu_sc0003304.1_g000034 Rmu_sc0003416.1_g000002 Rmu_sc0003613.1_g000010 Rmu_sc0003762.1_g000009 Rmu_sc0003776.1_g000028 Rmu_sc0003859.1_g000025 Rmu_sc0004553.1_g000014 Rmu_sc0004866.1_g000002 Rmu_sc0004941.1_g000047 Rmu_sc0005777.1_g000002 Rmu_sc0005958.1_g000001 Rmu_sc0006573.1_g000001 Rmu_sc0006912.1_g000005 Rmu_sc0006968.1_g000002 Rmu_sc0006986.1_g000020 Rmu_sc0007258.1_g000016 Rmu_sc0007803.1_g000001 Rmu_sc0008479.1_g000003 Rmu_sc0008506.1_g000012 Rmu_sc0009199.1_g000005 Rmu_sc0009431.1_g000008 Rmu_sc0009611.1_g000005 Rmu_sc0014287.1_g000001 Rmu_sc0014768.1_g000001 Rmu_sc0020577.1_g000001 Rmu_sc0028131.1_g000001 Rmu_sc0029371.1_g000001 Rmu_sc0034219.1_g000001 Rmu_ssc0000252.1_g000026 Rmu_ssc0000252.1_g000027 Rmu_ssc0000398.1_g000023 Rmu_ssc0000482.1_g000020
rosa_roxburghii Rroxscaffold_158G00443700 Rroxscaffold_1G00001910 Rroxscaffold_1G00001960 Rroxscaffold_1G00002400 Rroxscaffold_1G00015110 Rroxscaffold_1G00015140 Rroxscaffold_1G00028870 Rroxscaffold_1G00028930 Rroxscaffold_1G00031320 Rroxscaffold_1G00031990 Rroxscaffold_1G00060310 Rroxscaffold_1G00063330 Rroxscaffold_1G00071570 Rroxscaffold_2G00084360 Rroxscaffold_2G00084370 Rroxscaffold_2G00088550 Rroxscaffold_2G00088560 Rroxscaffold_2G00089850 Rroxscaffold_2G00095470 Rroxscaffold_2G00103510 Rroxscaffold_2G00114380 Rroxscaffold_2G00119580 Rroxscaffold_2G00122990 Rroxscaffold_2G00125720 Rroxscaffold_3G00223380 Rroxscaffold_3G00230410 Rroxscaffold_3G00233640 Rroxscaffold_3G00234580 Rroxscaffold_3G00241070 Rroxscaffold_4G00282590 Rroxscaffold_4G00309420 Rroxscaffold_4G00309430 Rroxscaffold_4G00314030 Rroxscaffold_4G00314610 Rroxscaffold_4G00316420 Rroxscaffold_4G00319130 Rroxscaffold_4G00319140 Rroxscaffold_4G00319350 Rroxscaffold_4G00324170 Rroxscaffold_4G00324230 Rroxscaffold_5G00346540 Rroxscaffold_5G00346580 Rroxscaffold_5G00346790 Rroxscaffold_5G00349270 Rroxscaffold_5G00350530 Rroxscaffold_5G00373500 Rroxscaffold_5G00378950 Rroxscaffold_5G00378960 Rroxscaffold_5G00381870 Rroxscaffold_6G00388230 Rroxscaffold_6G00389700 Rroxscaffold_6G00389810 Rroxscaffold_6G00391690 Rroxscaffold_6G00391820 Rroxscaffold_6G00391830 Rroxscaffold_6G00393500 Rroxscaffold_6G00396180 Rroxscaffold_6G00396460 Rroxscaffold_6G00418900 Rroxscaffold_6G00423330 Rroxscaffold_7G00173340 Rroxscaffold_7G00176630 Rroxscaffold_7G00181910 Rroxscaffold_7G00191850 Rroxscaffold_7G00199230 Rroxscaffold_7G00199250 Rroxscaffold_7G00203720 Rroxscaffold_7G00204410 Rroxscaffold_7G00204420 Rroxscaffold_7G00212090 Rroxscaffold_7G00215450
rosa_rugosa Rorug07G0321500
rosa_samantha Rh3BG349100 Rh4AG240700
rosa_wichuraiana Rw0G011180 Rw1G003000 Rw5G028290 Rw6G011280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 259, 910
AciI CCGC 1 cut(s) 788
AclWI GGATC 1 cut(s) 967
AcoI YGGCCR 1 cut(s) 408
AcsI RAATTY 2 cut(s) 249, 403
AfaI GTAC 3 cut(s) 433, 561, 1023
AfiI CCNNNNNNNGG 6 cut(s) 144, 345, 406, 662, 1076, 1283
AgsI TTSAA 7 cut(s) 502, 510, 591, 677, 845, 935, 1207
AjnI CCWGG 1 cut(s) 1304
AjuI GAANNNNNNNTTGG 2 cut(s) 558, 590
Alw21I GWGCWC 2 cut(s) 1126, 1187
Alw26I GTCTC 2 cut(s) 518, 603
AlwI GGATC 1 cut(s) 967
AoxI GGCC 2 cut(s) 408, 1274
ApeKI GCWGC 4 cut(s) 380, 383, 488, 491
ApoI RAATTY 2 cut(s) 249, 403
Asp700I GAANNNNTTC 1 cut(s) 129
AspS9I GGNCC 3 cut(s) 31, 757, 1334
AsuHPI GGTGA 6 cut(s) 77, 566, 616, 890, 1006, 1060
AvaII GGWCC 3 cut(s) 31, 757, 1334
BaeGI GKGCMC 1 cut(s) 305
BanI GGYRCC 2 cut(s) 259, 910
BanII GRGCYC 1 cut(s) 1126
Bbv12I GWGCWC 2 cut(s) 1126, 1187
BbvCI CCTCAGC 1 cut(s) 215
BbvI GCAGC 4 cut(s) 367, 370, 475, 503
BccI CCATC 7 cut(s) 48, 62, 147, 545, 984, 1152, 1216
BciT130I CCWGG 1 cut(s) 1306
BciVI GTATCC 2 cut(s) 736, 1386
BclI TGATCA 2 cut(s) 109, 1131
BcoDI GTCTC 2 cut(s) 518, 603
BfaI CTAG 3 cut(s) 170, 366, 942
BfmI CTRYAG 2 cut(s) 282, 489
BfuI GTATCC 2 cut(s) 736, 1386
BisI GCNGC 4 cut(s) 381, 384, 489, 492
BlpI GCTNAGC 1 cut(s) 309
BlsI GCNGC 4 cut(s) 382, 385, 490, 493
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 1 cut(s) 1306
Bme18I GGWCC 3 cut(s) 31, 757, 1334
BmgT120I GGNCC 3 cut(s) 31, 757, 1334
BmiI GGNNCC 6 cut(s) 32, 261, 912, 1227, 1335, 1336
BmrFI CCNGG 1 cut(s) 1306
BmrI ACTGGG 1 cut(s) 109
BmsI GCATC 1 cut(s) 688
BmuI ACTGGG 1 cut(s) 109
BpmI CTGGAG 1 cut(s) 383
Bpu10I CCTNAGC 2 cut(s) 215, 1339
Bpu1102I GCTNAGC 1 cut(s) 309
BpuEI CTTGAG 3 cut(s) 773, 1030, 1064
BsaJI CCNNGG 2 cut(s) 966, 990
BsaXI ACNNNNNCTCC 6 cut(s) 707, 737, 937, 967, 1113, 1143
Bsc4I CCNNNNNNNGG 6 cut(s) 144, 345, 406, 662, 1076, 1283
Bse1I ACTGG 1 cut(s) 104
Bse3DI GCAATG 1 cut(s) 393
BseBI CCWGG 1 cut(s) 1306
BseDI CCNNGG 2 cut(s) 966, 990
BseGI GGATG 6 cut(s) 112, 703, 724, 817, 838, 1227
BseLI CCNNNNNNNGG 6 cut(s) 144, 345, 406, 662, 1076, 1283
BseMI GCAATG 1 cut(s) 393
BseMII CTCAG 2 cut(s) 206, 323
BseNI ACTGG 1 cut(s) 104
BseRI GAGGAG 7 cut(s) 232, 707, 842, 908, 911, 945, 1218
BseSI GKGCMC 1 cut(s) 305
BseXI GCAGC 4 cut(s) 367, 370, 475, 503
BshFI GGCC 2 cut(s) 410, 1276
BshNI GGYRCC 2 cut(s) 259, 910
BsiHKAI GWGCWC 2 cut(s) 1126, 1187
BslFI GGGAC 2 cut(s) 44, 1320
BslI CCNNNNNNNGG 6 cut(s) 144, 345, 406, 662, 1076, 1283
BsmAI GTCTC 2 cut(s) 518, 603
BsmBI CGTCTC 1 cut(s) 518
BsmFI GGGAC 2 cut(s) 44, 1320
BsnI GGCC 2 cut(s) 410, 1276
Bsp1286I GDGCHC 3 cut(s) 305, 1126, 1187
Bsp1407I TGTACA 1 cut(s) 559
Bsp143I GATC 5 cut(s) 109, 368, 972, 1050, 1131
Bsp1720I GCTNAGC 1 cut(s) 309
Bsp19I CCATGG 1 cut(s) 966
BspACI CCGC 1 cut(s) 788
BspANI GGCC 2 cut(s) 410, 1276
BspCNI CTCAG 2 cut(s) 207, 322
BspHI TCATGA 1 cut(s) 979
BspLI GGNNCC 6 cut(s) 32, 261, 912, 1227, 1335, 1336
BspMAI CTGCAG 2 cut(s) 286, 493
BspPI GGATC 1 cut(s) 967
BspT107I GGYRCC 2 cut(s) 259, 910
BsrDI GCAATG 1 cut(s) 393
BsrGI TGTACA 1 cut(s) 559
BsrI ACTGG 1 cut(s) 104
BssECI CCNNGG 2 cut(s) 966, 990
BssMI GATC 5 cut(s) 109, 368, 972, 1050, 1131
BssT1I CCWWGG 2 cut(s) 966, 990
Bst2UI CCWGG 1 cut(s) 1306
Bst4CI ACNGT 2 cut(s) 208, 424
Bst6I CTCTTC 5 cut(s) 622, 684, 732, 930, 1241
BstAUI TGTACA 1 cut(s) 559
BstDEI CTNAG 6 cut(s) 143, 160, 215, 309, 1257, 1339
BstDSI CCRYGG 1 cut(s) 966
BstF5I GGATG 6 cut(s) 112, 703, 724, 817, 838, 1227
BstKTI GATC 5 cut(s) 112, 371, 975, 1053, 1134
BstMAI GTCTC 2 cut(s) 518, 603
BstMBI GATC 5 cut(s) 109, 368, 972, 1050, 1131
BstMWI GCNNNNNNNGC 1 cut(s) 300
BstNI CCWGG 1 cut(s) 1306
BstNSI RCATGY 1 cut(s) 317
BstSCI CCNGG 1 cut(s) 1304
BstSFI CTRYAG 2 cut(s) 282, 489
BstSLI GKGCMC 1 cut(s) 305
BstV1I GCAGC 4 cut(s) 367, 370, 475, 503
BstX2I RGATCY 1 cut(s) 972
BstXI CCANNNNNNTGG 1 cut(s) 967
BstYI RGATCY 1 cut(s) 972
BsuI GTATCC 2 cut(s) 736, 1386
BsuRI GGCC 2 cut(s) 410, 1276
BtgI CCRYGG 1 cut(s) 966
BtgZI GCGATG 1 cut(s) 67
BtsCI GGATG 6 cut(s) 112, 703, 724, 817, 838, 1227
BtsI GCAGTG 1 cut(s) 303
BtsIMutI CAGTG 2 cut(s) 204, 303
CciI TCATGA 1 cut(s) 979
Cfr13I GGNCC 3 cut(s) 31, 757, 1334
Csp6I GTAC 3 cut(s) 432, 560, 1022
CviAII CATG 4 cut(s) 314, 967, 980, 1311
CviQI GTAC 3 cut(s) 432, 560, 1022
DdeI CTNAG 6 cut(s) 143, 160, 215, 309, 1257, 1339
DpnI GATC 5 cut(s) 111, 370, 974, 1052, 1133
DpnII GATC 5 cut(s) 109, 368, 972, 1050, 1131
EaeI YGGCCR 1 cut(s) 408
Eam1104I CTCTTC 5 cut(s) 622, 684, 732, 930, 1241
EarI CTCTTC 5 cut(s) 622, 684, 732, 930, 1241
Ecl136II GAGCTC 1 cut(s) 1124
Eco130I CCWWGG 2 cut(s) 966, 990
Eco24I GRGCYC 1 cut(s) 1126
Eco32I GATATC 1 cut(s) 456
Eco47I GGWCC 3 cut(s) 31, 757, 1334
Eco53kI GAGCTC 1 cut(s) 1124
EcoICRI GAGCTC 1 cut(s) 1124
EcoO109I RGGNCCY 3 cut(s) 31, 757, 1334
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 1 cut(s) 1304
EcoRV GATATC 1 cut(s) 456
EcoT14I CCWWGG 2 cut(s) 966, 990
EcoT38I GRGCYC 1 cut(s) 1126
ErhI CCWWGG 2 cut(s) 966, 990
Esp3I CGTCTC 1 cut(s) 518
FaeI CATG 4 cut(s) 317, 970, 983, 1314
FaqI GGGAC 2 cut(s) 44, 1320
FatI CATG 4 cut(s) 313, 966, 979, 1310
FauI CCCGC 1 cut(s) 781
FbaI TGATCA 2 cut(s) 109, 1131
Fnu4HI GCNGC 4 cut(s) 381, 384, 489, 492
FokI GGATG 6 cut(s) 99, 710, 731, 824, 845, 1234
FriOI GRGCYC 1 cut(s) 1126
Fsp4HI GCNGC 4 cut(s) 381, 384, 489, 492
FspBI CTAG 3 cut(s) 170, 366, 942
GluI GCNGC 4 cut(s) 381, 384, 489, 492
GsuI CTGGAG 1 cut(s) 383
HaeIII GGCC 2 cut(s) 410, 1276
Hin1II CATG 4 cut(s) 317, 970, 983, 1314
HindIII AAGCTT 1 cut(s) 749
HinfI GANTC 4 cut(s) 373, 683, 722, 938
HphI GGTGA 6 cut(s) 77, 566, 616, 890, 1006, 1060
Hpy188I TCNGA 2 cut(s) 460, 688
Hpy188III TCNNGA 6 cut(s) 20, 227, 400, 427, 980, 1204
HpyAV CCTTC 3 cut(s) 238, 1201, 1207
HpyCH4III ACNGT 2 cut(s) 208, 424
HpyCH4V TGCA 5 cut(s) 284, 386, 420, 491, 596
HpyF10VI GCNNNNNNNGC 1 cut(s) 300
HpyF3I CTNAG 6 cut(s) 143, 160, 215, 309, 1257, 1339
Hsp92II CATG 4 cut(s) 317, 970, 983, 1314
KflI GGGWCCC 1 cut(s) 1334
Ksp22I TGATCA 2 cut(s) 109, 1131
Kzo9I GATC 5 cut(s) 109, 368, 972, 1050, 1131
LmnI GCTCC 4 cut(s) 838, 1121, 1231, 1307
LpnPI CCDG 9 cut(s) 5, 85, 184, 340, 412, 413, 498, 1291, 1318
Lsp1109I GCAGC 4 cut(s) 367, 370, 475, 503
LweI GCATC 1 cut(s) 688
MaeI CTAG 3 cut(s) 170, 366, 942
MalI GATC 5 cut(s) 111, 370, 974, 1052, 1133
MboI GATC 5 cut(s) 109, 368, 972, 1050, 1131
MboII GAAGA 7 cut(s) 609, 689, 701, 749, 947, 1045, 1258
MflI RGATCY 1 cut(s) 972
MhlI GDGCHC 3 cut(s) 305, 1126, 1187
MluCI AATT 9 cut(s) 78, 249, 403, 532, 815, 845, 997, 1239, 1281
MlyI GAGTC 3 cut(s) 367, 731, 947
MroXI GAANNNNTTC 1 cut(s) 129
MseI TTAA 7 cut(s) 42, 81, 96, 156, 186, 1026, 1073
MslI CAYNNNNRTG 1 cut(s) 965
MspR9I CCNGG 1 cut(s) 1306
MvaI CCWGG 1 cut(s) 1306
MwoI GCNNNNNNNGC 1 cut(s) 300
NcoI CCATGG 1 cut(s) 966
NdeII GATC 5 cut(s) 109, 368, 972, 1050, 1131
NlaIII CATG 4 cut(s) 317, 970, 983, 1314
NlaIV GGNNCC 6 cut(s) 32, 261, 912, 1227, 1335, 1336
NspI RCATGY 1 cut(s) 317
PagI TCATGA 1 cut(s) 979
PdmI GAANNNNTTC 1 cut(s) 129
PfeI GAWTC 1 cut(s) 683
PkrI GCNGC 4 cut(s) 382, 385, 490, 493
PleI GAGTC 3 cut(s) 367, 730, 946
PpsI GAGTC 3 cut(s) 367, 730, 946
PpuMI RGGWCCY 3 cut(s) 31, 757, 1334
Psp124BI GAGCTC 1 cut(s) 1126
Psp5II RGGWCCY 3 cut(s) 31, 757, 1334
Psp6I CCWGG 1 cut(s) 1304
PspGI CCWGG 1 cut(s) 1304
PspN4I GGNNCC 6 cut(s) 32, 261, 912, 1227, 1335, 1336
PspPI GGNCC 3 cut(s) 31, 757, 1334
PspPPI RGGWCCY 3 cut(s) 31, 757, 1334
PstI CTGCAG 2 cut(s) 286, 493
PsuI RGATCY 1 cut(s) 972
RsaI GTAC 3 cut(s) 433, 561, 1023
RsaNI GTAC 3 cut(s) 432, 560, 1022
RseI CAYNNNNRTG 1 cut(s) 965
SacI GAGCTC 1 cut(s) 1126
SaqAI TTAA 7 cut(s) 42, 81, 96, 156, 186, 1026, 1073
SatI GCNGC 4 cut(s) 381, 384, 489, 492
Sau3AI GATC 5 cut(s) 109, 368, 972, 1050, 1131
Sau96I GGNCC 3 cut(s) 31, 757, 1334
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 3 cut(s) 367, 731, 947
ScrFI CCNGG 1 cut(s) 1306
SduI GDGCHC 3 cut(s) 305, 1126, 1187
SfaNI GCATC 1 cut(s) 688
SfcI CTRYAG 2 cut(s) 282, 489
SinI GGWCC 3 cut(s) 31, 757, 1334
SmiMI CAYNNNNRTG 1 cut(s) 965
SmlI CTYRAG 4 cut(s) 752, 1009, 1043, 1367
SmoI CTYRAG 4 cut(s) 752, 1009, 1043, 1367
Sse9I AATT 9 cut(s) 78, 249, 403, 532, 815, 845, 997, 1239, 1281
SsiI CCGC 1 cut(s) 788
SspI AATATT 1 cut(s) 638
SspMI CTAG 3 cut(s) 170, 366, 942
SstI GAGCTC 1 cut(s) 1126
StyD4I CCNGG 1 cut(s) 1304
StyI CCWWGG 2 cut(s) 966, 990
TaaI ACNGT 2 cut(s) 208, 424
TaqI TCGA 2 cut(s) 123, 371
TasI AATT 9 cut(s) 78, 249, 403, 532, 815, 845, 997, 1239, 1281
TatI WGTACW 3 cut(s) 431, 559, 1021
TfiI GAWTC 1 cut(s) 683
Tru1I TTAA 7 cut(s) 42, 81, 96, 156, 186, 1026, 1073
Tru9I TTAA 7 cut(s) 42, 81, 96, 156, 186, 1026, 1073
TscAI CASTG 2 cut(s) 211, 310
TseI GCWGC 4 cut(s) 380, 383, 488, 491
TspDTI ATGAA 4 cut(s) 204, 828, 838, 859
TspGWI ACGGA 1 cut(s) 638
TspRI CASTG 2 cut(s) 211, 310
VpaK11BI GGWCC 3 cut(s) 31, 757, 1334
XapI RAATTY 2 cut(s) 249, 403
XceI RCATGY 1 cut(s) 317
XmnI GAANNNNTTC 1 cut(s) 129
XspI CTAG 3 cut(s) 170, 366, 942
ZrmI AGTACT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.