Rroxscaffold_6G00396180

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000195
Physical Location & Seq
Forward (+)
17502644 .. 17504383
1740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00396180.1

Sequence Viewer

Length: 1305 bp
ATGCTACGCGCCGGTGCGGACTCCCGCCAAAGAAGTGGCCCTACGGAGCACAGCCAGCGTGCCTCGCTCGAGCCCCGCTTGCTAGATCACCGCGGACACGCAGCCACGCACCGCACCAAGACAAGCATCGAAGCTCCGTGCCGGGGACCGAGGCATGTCGTCCCACATCGAAAACATGAAGAGAGTCGGCCTCCTTCTTCACCTAGAAAAGAGTATGAGTACAAGATGGGGATGTATCAAGAGACATGTGTACCCGAAGCATATCCTCATGAGCAAGCTTTTGAGCCTAGGAAGCCATCACTTGAAGAACAACTAGCTCAATTAGAAGCCTCTAATGTTCAATTGCAAGCCTCCCAAGCTCGATTGCATGCTAAATTGGAAGCCTTCAATGCTCAATTGCAAGCTTCTCAAGAAATGACTTCACATTCCAATGAGCAACTTGAGCCTAGTCTTGCACAAGAGCCACCATTCACCATTTGTCATGAGCAAGATTCTTTCTTTAACCAAGTGAAGCCTTCTTTAAGGGGAGTGTATTATGAGCATCATGAGCAAGAGTTGTCTATTCAAGATCGAGAGGGTGATATTCATGTACAAGAAAGTGAGCTTGGTTATGAAAGTTCCAATGCAAATAGGGTGAGAGACGACATTTTGAAGGAATCGGTGCAATATTGGAACTCTAATTTTCACAATGAAGAGGAGGTATATGAAGTTGATTCCGAAGAAAATGATAGCTTGTCTAGTGAGAAGGATGTGGAGCTTGAAGACTTACACCATGATCCCTTAATCGTTGAGGCCGATATTCTCAAGGAGGAAGAAAGTCCTTCAATACCTTTTGATGATGAAGAAATTGAAGAGAAAAAGGTTTTCTCTCCTCCCACATCCACGGAGATCCATCATGTGCTTCCCAAGGTAGAGAGTAGAACATTGAACACTTATGTACTTAATGAGAAGATTGAGCTTAAAGTACTTTTACCTCTCGATCCACCATTAAGTGGTCAATGTTTCTACAATGAGGTGATGGATTGGAAAGGAAGTGGAGCACCTGCACTCACTATTTCCCATCACTCTCAAGAGTTTCTACCACCTATTGTTCCTACGAGCATCATTTCTACACCACTTGAGAAGGAGAATGCAAGGTTGGCTTCTAGAAGAAAAATTGAGAAGAGGAGGAATATTAAGAAGCTACACTTTTGGTCACCCATTGGAATATTCATGGATAGCTCTTGGTCTTGCCTCTATGACATATCAAGGAGTCCCTTAGCCCCAAATAATATGGTGGTCGCACTTGAGAAGTATCCACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

434

Amino Acids

49.81

Weight (kDa)

5.26

Isoelectric Point (pI)

66.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000195)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g25780 FvH4_6g25920
rosa_chinensis RchiOBHm_Chr1g0366971 RchiOBHm_Chr1g0372841 RchiOBHm_Chr2g0146841 RchiOBHm_Chr2g0154821 RchiOBHm_Chr2g0159611 RchiOBHm_Chr3g0452071 RchiOBHm_Chr3g0453731 RchiOBHm_Chr3g0457891 RchiOBHm_Chr3g0471041 RchiOBHm_Chr3g0473741 RchiOBHm_Chr4g0427761 RchiOBHm_Chr5g0041301 RchiOBHm_Chr5g0076511 RchiOBHm_Chr6g0281431 RchiOBHm_Chr7g0180511
rosa_multiflora Rmu_sc0000082.1_g000052 Rmu_sc0000125.1_g000058 Rmu_sc0000147.1_g000108 Rmu_sc0000210.1_g000011 Rmu_sc0000229.1_g000006 Rmu_sc0000245.1_g000013 Rmu_sc0000897.1_g000016 Rmu_sc0001059.1_g000005 Rmu_sc0001336.1_g000059 Rmu_sc0001464.1_g000025 Rmu_sc0001630.1_g000013 Rmu_sc0001790.1_g000012 Rmu_sc0001939.1_g000003 Rmu_sc0002132.1_g000013 Rmu_sc0002235.1_g000008 Rmu_sc0002235.1_g000022 Rmu_sc0002548.1_g000030 Rmu_sc0002564.1_g000018 Rmu_sc0002652.1_g000001 Rmu_sc0002759.1_g000007 Rmu_sc0002759.1_g000011 Rmu_sc0002799.1_g000012 Rmu_sc0002858.1_g000033 Rmu_sc0002882.1_g000041 Rmu_sc0003032.1_g000030 Rmu_sc0003033.1_g000041 Rmu_sc0003044.1_g000038 Rmu_sc0003072.1_g000004 Rmu_sc0003264.1_g000025 Rmu_sc0003304.1_g000034 Rmu_sc0003416.1_g000002 Rmu_sc0003613.1_g000010 Rmu_sc0003762.1_g000009 Rmu_sc0003776.1_g000028 Rmu_sc0003859.1_g000025 Rmu_sc0004553.1_g000014 Rmu_sc0004866.1_g000002 Rmu_sc0004941.1_g000047 Rmu_sc0005777.1_g000002 Rmu_sc0005958.1_g000001 Rmu_sc0006573.1_g000001 Rmu_sc0006912.1_g000005 Rmu_sc0006968.1_g000002 Rmu_sc0006986.1_g000020 Rmu_sc0007258.1_g000016 Rmu_sc0007803.1_g000001 Rmu_sc0008479.1_g000003 Rmu_sc0008506.1_g000012 Rmu_sc0009199.1_g000005 Rmu_sc0009431.1_g000008 Rmu_sc0009611.1_g000005 Rmu_sc0014287.1_g000001 Rmu_sc0014768.1_g000001 Rmu_sc0020577.1_g000001 Rmu_sc0028131.1_g000001 Rmu_sc0029371.1_g000001 Rmu_sc0034219.1_g000001 Rmu_ssc0000252.1_g000026 Rmu_ssc0000252.1_g000027 Rmu_ssc0000398.1_g000023 Rmu_ssc0000482.1_g000020
rosa_roxburghii Rroxscaffold_158G00443700 Rroxscaffold_1G00001910 Rroxscaffold_1G00001960 Rroxscaffold_1G00002400 Rroxscaffold_1G00015110 Rroxscaffold_1G00015140 Rroxscaffold_1G00028870 Rroxscaffold_1G00028930 Rroxscaffold_1G00031320 Rroxscaffold_1G00031990 Rroxscaffold_1G00060310 Rroxscaffold_1G00063330 Rroxscaffold_1G00071570 Rroxscaffold_2G00084360 Rroxscaffold_2G00084370 Rroxscaffold_2G00088550 Rroxscaffold_2G00088560 Rroxscaffold_2G00089850 Rroxscaffold_2G00095470 Rroxscaffold_2G00103510 Rroxscaffold_2G00114380 Rroxscaffold_2G00119580 Rroxscaffold_2G00122990 Rroxscaffold_2G00125720 Rroxscaffold_3G00223380 Rroxscaffold_3G00230410 Rroxscaffold_3G00233640 Rroxscaffold_3G00234580 Rroxscaffold_3G00241070 Rroxscaffold_4G00282590 Rroxscaffold_4G00309420 Rroxscaffold_4G00309430 Rroxscaffold_4G00314030 Rroxscaffold_4G00314610 Rroxscaffold_4G00316420 Rroxscaffold_4G00319130 Rroxscaffold_4G00319140 Rroxscaffold_4G00319350 Rroxscaffold_4G00324170 Rroxscaffold_4G00324230 Rroxscaffold_5G00346540 Rroxscaffold_5G00346580 Rroxscaffold_5G00346790 Rroxscaffold_5G00349270 Rroxscaffold_5G00350530 Rroxscaffold_5G00373500 Rroxscaffold_5G00378950 Rroxscaffold_5G00378960 Rroxscaffold_5G00381870 Rroxscaffold_6G00388230 Rroxscaffold_6G00389700 Rroxscaffold_6G00389810 Rroxscaffold_6G00391690 Rroxscaffold_6G00391820 Rroxscaffold_6G00391830 Rroxscaffold_6G00393500 Rroxscaffold_6G00396180 Rroxscaffold_6G00396460 Rroxscaffold_6G00418900 Rroxscaffold_6G00423330 Rroxscaffold_7G00173340 Rroxscaffold_7G00176630 Rroxscaffold_7G00181910 Rroxscaffold_7G00191850 Rroxscaffold_7G00199230 Rroxscaffold_7G00199250 Rroxscaffold_7G00203720 Rroxscaffold_7G00204410 Rroxscaffold_7G00204420 Rroxscaffold_7G00212090 Rroxscaffold_7G00215450
rosa_rugosa Rorug07G0321500
rosa_samantha Rh3BG349100 Rh4AG240700
rosa_wichuraiana Rw0G011180 Rw1G003000 Rw5G028290 Rw6G011280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1051
Acc36I ACCTGC 1 cut(s) 1051
AccB7I CCANNNNNTGG 1 cut(s) 992
AccII CGCG 2 cut(s) 9, 93
AciI CCGC 6 cut(s) 17, 25, 76, 91, 93, 112
AclWI GGATC 3 cut(s) 770, 883, 974
AfaI GTAC 5 cut(s) 221, 252, 591, 939, 966
AfiI CCNNNNNNNGG 2 cut(s) 143, 992
AflIII ACRYGT 1 cut(s) 245
AgsI TTSAA 9 cut(s) 305, 341, 388, 566, 652, 761, 825, 851, 928
AjuI GAANNNNNNNTTGG 4 cut(s) 588, 620, 1121, 1153
Alw21I GWGCWC 2 cut(s) 51, 1042
Alw26I GTCTC 2 cut(s) 236, 633
AlwI GGATC 3 cut(s) 770, 883, 974
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 3 cut(s) 37, 188, 792
ApeKI GCWGC 1 cut(s) 101
AspA2I CCTAGG 1 cut(s) 287
AspLEI GCGC 1 cut(s) 11
AspS9I GGNCC 2 cut(s) 38, 146
AsuC2I CCSGG 1 cut(s) 143
AsuHPI GGTGA 7 cut(s) 80, 192, 463, 590, 646, 1027, 1188
AvaI CYCGRG 1 cut(s) 68
AvaII GGWCC 1 cut(s) 146
AvrII CCTAGG 1 cut(s) 287
BaeI ACNNNNGTAYC 2 cut(s) 234, 267
BanII GRGCYC 1 cut(s) 75
BarI GAAGNNNNNNTAC 2 cut(s) 25, 57
BbsI GAAGAC 1 cut(s) 768
Bbv12I GWGCWC 2 cut(s) 51, 1042
BbvI GCAGC 1 cut(s) 113
BccI CCATC 5 cut(s) 220, 304, 900, 1012, 1068
BciVI GTATCC 1 cut(s) 1305
BcnI CCSGG 1 cut(s) 143
BcoDI GTCTC 2 cut(s) 236, 633
BfaI CTAG 7 cut(s) 83, 204, 288, 314, 447, 738, 1146
BfuAI ACCTGC 1 cut(s) 1051
BfuI GTATCC 1 cut(s) 1305
BisI GCNGC 1 cut(s) 102
BlnI CCTAGG 1 cut(s) 287
BlsI GCNGC 1 cut(s) 103
BmcAI AGTACT 1 cut(s) 966
Bme1390I CCNGG 1 cut(s) 143
Bme18I GGWCC 1 cut(s) 146
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 2 cut(s) 38, 146
BmiI GGNNCC 1 cut(s) 147
BmrFI CCNGG 1 cut(s) 143
BmsI GCATC 3 cut(s) 135, 550, 1110
BpiI GAAGAC 1 cut(s) 768
BplI GAGNNNNNCTC 2 cut(s) 175, 207
Bpu10I CCTNAGC 1 cut(s) 1258
BpuEI CTTGAG 5 cut(s) 393, 461, 788, 1053, 1139
BpuMI CCSGG 1 cut(s) 143
BsaJI CCNNGG 6 cut(s) 91, 142, 149, 287, 882, 906
Bsc4I CCNNNNNNNGG 2 cut(s) 143, 992
Bse118I RCCGGY 1 cut(s) 11
BseDI CCNNGG 6 cut(s) 91, 142, 149, 287, 882, 906
BseGI GGATG 3 cut(s) 237, 754, 878
BseLI CCNNNNNNNGG 2 cut(s) 143, 992
BseRI GAGGAG 3 cut(s) 710, 861, 1180
BseXI GCAGC 1 cut(s) 113
BsgI GTGCAG 1 cut(s) 1029
Bsh1236I CGCG 2 cut(s) 9, 93
BshFI GGCC 3 cut(s) 39, 190, 794
BsiHKAI GWGCWC 2 cut(s) 51, 1042
BsiHKCI CYCGRG 1 cut(s) 68
BsiSI CCGG 2 cut(s) 12, 142
BslFI GGGAC 3 cut(s) 146, 159, 1239
BslI CCNNNNNNNGG 2 cut(s) 143, 992
BsmAI GTCTC 2 cut(s) 236, 633
BsmBI CGTCTC 1 cut(s) 633
BsmFI GGGAC 3 cut(s) 146, 159, 1239
BsmI GAATGC 1 cut(s) 1135
BsnI GGCC 3 cut(s) 39, 190, 794
BsoBI CYCGRG 1 cut(s) 68
Bsp1286I GDGCHC 3 cut(s) 51, 75, 1042
Bsp1407I TGTACA 1 cut(s) 589
Bsp143I GATC 5 cut(s) 85, 568, 775, 888, 979
BspACI CCGC 6 cut(s) 17, 25, 76, 91, 93, 112
BspANI GGCC 3 cut(s) 39, 190, 794
BspFNI CGCG 2 cut(s) 9, 93
BspHI TCATGA 3 cut(s) 268, 481, 544
BspLI GGNNCC 1 cut(s) 147
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 3 cut(s) 770, 883, 974
BsrFI RCCGGY 1 cut(s) 11
BsrGI TGTACA 1 cut(s) 589
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 6 cut(s) 91, 142, 149, 287, 882, 906
BssMI GATC 5 cut(s) 85, 568, 775, 888, 979
BssT1I CCWWGG 2 cut(s) 287, 906
Bst6I CTCTTC 4 cut(s) 174, 687, 846, 1157
BstAUI TGTACA 1 cut(s) 589
BstC8I GCNNGC 7 cut(s) 56, 60, 80, 276, 348, 369, 402
BstDEI CTNAG 1 cut(s) 1258
BstDSI CCRYGG 2 cut(s) 91, 882
BstEII GGTNACC 1 cut(s) 1194
BstF5I GGATG 3 cut(s) 237, 754, 878
BstFNI CGCG 2 cut(s) 9, 93
BstHHI GCGC 1 cut(s) 11
BstKTI GATC 5 cut(s) 88, 571, 778, 891, 982
BstMAI GTCTC 2 cut(s) 236, 633
BstMBI GATC 5 cut(s) 85, 568, 775, 888, 979
BstMWI GCNNNNNNNGC 9 cut(s) 55, 64, 79, 292, 356, 389, 442, 547, 1139
BstNSI RCATGY 3 cut(s) 158, 249, 371
BstPI GGTNACC 1 cut(s) 1194
BstSCI CCNGG 1 cut(s) 141
BstUI CGCG 2 cut(s) 9, 93
BstV1I GCAGC 1 cut(s) 113
BstV2I GAAGAC 1 cut(s) 768
BstX2I RGATCY 1 cut(s) 888
BstXI CCANNNNNNTGG 1 cut(s) 35
BstYI RGATCY 1 cut(s) 888
BsuI GTATCC 1 cut(s) 1305
BsuRI GGCC 3 cut(s) 39, 190, 794
BtgI CCRYGG 2 cut(s) 91, 882
BtsCI GGATG 3 cut(s) 237, 754, 878
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 7 cut(s) 56, 60, 80, 276, 348, 369, 402
CciI TCATGA 3 cut(s) 268, 481, 544
CfoI GCGC 1 cut(s) 11
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 2 cut(s) 38, 146
Cfr42I CCGCGG 1 cut(s) 94
Csp6I GTAC 5 cut(s) 220, 251, 590, 938, 965
CviQI GTAC 5 cut(s) 220, 251, 590, 938, 965
DdeI CTNAG 1 cut(s) 1258
DpnI GATC 5 cut(s) 87, 570, 777, 890, 981
DpnII GATC 5 cut(s) 85, 568, 775, 888, 979
Eam1104I CTCTTC 4 cut(s) 174, 687, 846, 1157
EarI CTCTTC 4 cut(s) 174, 687, 846, 1157
Eco130I CCWWGG 2 cut(s) 287, 906
Eco24I GRGCYC 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 146
Eco88I CYCGRG 1 cut(s) 68
Eco91I GGTNACC 1 cut(s) 1194
EcoO65I GGTNACC 1 cut(s) 1194
EcoT14I CCWWGG 2 cut(s) 287, 906
EcoT38I GRGCYC 1 cut(s) 75
ErhI CCWWGG 2 cut(s) 287, 906
Esp3I CGTCTC 1 cut(s) 633
FalI AAGNNNNNCTT 4 cut(s) 1126, 1158, 1172, 1204
FaqI GGGAC 3 cut(s) 146, 159, 1239
FauI CCCGC 2 cut(s) 32, 83
Fnu4HI GCNGC 1 cut(s) 102
FokI GGATG 3 cut(s) 244, 761, 865
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 1 cut(s) 102
FspBI CTAG 7 cut(s) 83, 204, 288, 314, 447, 738, 1146
GlaI GCGC 1 cut(s) 10
GluI GCNGC 1 cut(s) 102
HaeIII GGCC 3 cut(s) 39, 190, 794
HapII CCGG 2 cut(s) 12, 142
HhaI GCGC 1 cut(s) 11
Hin6I GCGC 1 cut(s) 9
HinP1I GCGC 1 cut(s) 9
HindIII AAGCTT 2 cut(s) 276, 402
HinfI GANTC 6 cut(s) 20, 184, 491, 656, 713, 1252
HpaII CCGG 2 cut(s) 12, 142
HphI GGTGA 7 cut(s) 80, 192, 463, 590, 646, 1027, 1188
Hpy166II GTNNAC 1 cut(s) 251
Hpy188I TCNGA 1 cut(s) 718
Hpy8I GTNNAC 1 cut(s) 251
HpyAV CCTTC 7 cut(s) 204, 394, 525, 646, 739, 831, 1117
HpyCH4V TGCA 8 cut(s) 346, 367, 400, 455, 626, 664, 1046, 1133
HpyF10VI GCNNNNNNNGC 9 cut(s) 55, 64, 79, 292, 356, 389, 442, 547, 1139
HpyF3I CTNAG 1 cut(s) 1258
HspAI GCGC 1 cut(s) 9
KspI CCGCGG 1 cut(s) 94
Kzo9I GATC 5 cut(s) 85, 568, 775, 888, 979
LmnI GCTCC 4 cut(s) 46, 139, 754, 1037
LpnPI CCDG 4 cut(s) 25, 68, 155, 1056
Lsp1109I GCAGC 1 cut(s) 113
LweI GCATC 3 cut(s) 135, 550, 1110
MaeI CTAG 7 cut(s) 83, 204, 288, 314, 447, 738, 1146
MaeIII GTNAC 1 cut(s) 1194
MalI GATC 5 cut(s) 87, 570, 777, 890, 981
MboI GATC 5 cut(s) 85, 568, 775, 888, 979
MfeI CAATTG 2 cut(s) 341, 395
MflI RGATCY 1 cut(s) 888
MhlI GDGCHC 3 cut(s) 51, 75, 1042
MluCI AATT 7 cut(s) 320, 341, 374, 395, 679, 846, 1155
MlyI GAGTC 3 cut(s) 14, 193, 1261
MseI TTAA 7 cut(s) 501, 521, 782, 942, 960, 989, 1176
MslI CAYNNNNRTG 1 cut(s) 429
MspA1I CMGCKG 1 cut(s) 93
MspI CCGG 2 cut(s) 12, 142
MspR9I CCNGG 1 cut(s) 143
MunI CAATTG 2 cut(s) 341, 395
Mva1269I GAATGC 1 cut(s) 1135
MvnI CGCG 2 cut(s) 9, 93
MwoI GCNNNNNNNGC 9 cut(s) 55, 64, 79, 292, 356, 389, 442, 547, 1139
NciI CCSGG 1 cut(s) 143
NdeII GATC 5 cut(s) 85, 568, 775, 888, 979
NlaIV GGNNCC 1 cut(s) 147
NmuCI GTSAC 1 cut(s) 1194
NspI RCATGY 3 cut(s) 158, 249, 371
PaeI GCATGC 1 cut(s) 371
PaeR7I CTCGAG 1 cut(s) 68
PagI TCATGA 3 cut(s) 268, 481, 544
PaqCI CACCTGC 1 cut(s) 1051
PciI ACATGT 1 cut(s) 245
PcsI WCGNNNNNNNCGW 1 cut(s) 792
PctI GAATGC 1 cut(s) 1135
PfeI GAWTC 3 cut(s) 491, 656, 713
PflMI CCANNNNNTGG 1 cut(s) 992
PkrI GCNGC 1 cut(s) 103
PleI GAGTC 3 cut(s) 14, 192, 1260
PpsI GAGTC 3 cut(s) 14, 192, 1260
PscI ACATGT 1 cut(s) 245
PspEI GGTNACC 1 cut(s) 1194
PspN4I GGNNCC 1 cut(s) 147
PspPI GGNCC 2 cut(s) 38, 146
PspXI VCTCGAGB 1 cut(s) 68
PsuI RGATCY 1 cut(s) 888
RsaI GTAC 5 cut(s) 221, 252, 591, 939, 966
RsaNI GTAC 5 cut(s) 220, 251, 590, 938, 965
RseI CAYNNNNRTG 1 cut(s) 429
SacII CCGCGG 1 cut(s) 94
SaqAI TTAA 7 cut(s) 501, 521, 782, 942, 960, 989, 1176
SatI GCNGC 1 cut(s) 102
Sau3AI GATC 5 cut(s) 85, 568, 775, 888, 979
Sau96I GGNCC 2 cut(s) 38, 146
ScaI AGTACT 1 cut(s) 966
SchI GAGTC 3 cut(s) 14, 193, 1261
ScrFI CCNGG 1 cut(s) 143
SduI GDGCHC 3 cut(s) 51, 75, 1042
SfaNI GCATC 3 cut(s) 135, 550, 1110
Sfr274I CTCGAG 1 cut(s) 68
Sfr303I CCGCGG 1 cut(s) 94
SgrAI CRCCGGYG 1 cut(s) 11
SgrBI CCGCGG 1 cut(s) 94
SinI GGWCC 1 cut(s) 146
SlaI CTCGAG 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 429
SmlI CTYRAG 7 cut(s) 68, 408, 440, 803, 1068, 1118, 1286
SmoI CTYRAG 7 cut(s) 68, 408, 440, 803, 1068, 1118, 1286
SphI GCATGC 1 cut(s) 371
Sse9I AATT 7 cut(s) 320, 341, 374, 395, 679, 846, 1155
SsiI CCGC 6 cut(s) 17, 25, 76, 91, 93, 112
SspI AATATT 3 cut(s) 668, 1174, 1209
SspMI CTAG 7 cut(s) 83, 204, 288, 314, 447, 738, 1146
StyD4I CCNGG 1 cut(s) 141
StyI CCWWGG 2 cut(s) 287, 906
TaqI TCGA 6 cut(s) 69, 129, 169, 361, 571, 978
TaqII GACCGA 1 cut(s) 163
TasI AATT 7 cut(s) 320, 341, 374, 395, 679, 846, 1155
TatI WGTACW 4 cut(s) 219, 589, 937, 964
TfiI GAWTC 3 cut(s) 491, 656, 713
Tru1I TTAA 7 cut(s) 501, 521, 782, 942, 960, 989, 1176
Tru9I TTAA 7 cut(s) 501, 521, 782, 942, 960, 989, 1176
TseFI GTSAC 1 cut(s) 1194
TseI GCWGC 1 cut(s) 101
Tsp45I GTSAC 1 cut(s) 1194
TspDTI ATGAA 7 cut(s) 192, 575, 627, 705, 720, 855, 1201
TspGWI ACGGA 3 cut(s) 59, 126, 899
Van91I CCANNNNNTGG 1 cut(s) 992
VpaK11BI GGWCC 1 cut(s) 146
XbaI TCTAGA 1 cut(s) 1145
XceI RCATGY 3 cut(s) 158, 249, 371
XhoI CTCGAG 1 cut(s) 68
XmaJI CCTAGG 1 cut(s) 287
XspI CTAG 7 cut(s) 83, 204, 288, 314, 447, 738, 1146
ZrmI AGTACT 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.