RchiOBHm_Chr5g0021371

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000181
Physical Location & Seq
Forward (+)
15592261 .. 15596195
3935 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30143

Sequence Viewer

Length: 768 bp
ATGTCGTCTCTGTCTTGGCGGGAACTCCGGGACCTGGAATACGCAGGGCGCCGACCCGACCCGTTTGAATCATTGGGATTCCGTTCGCCACCAGCTGCCGTTCTCCGCCGCCTCGCCCGGGATTATCGTGATACCGTGAAGATTCCAGATCCATCGGCGGGCACTACTACTTCTACATCTGCCTCTCCCTACCCTGAAGCACCCCTGGCTGCTCCCCTGACTCCTCACCCTTTAAGTTTTTTTGACGATGCATATACCATACAGAAGCTCCAAACAGAAAAATGTATGTATTGTACAAAGGTACACGGTATTGCATCTTGCTCCTACACGAGACGTGTCCCAAAGAATGCACCTGTTGGCCCTGGCTGTGAACTAGTTTGTAGGATCTGTGAAAGTCCGTTTTCAGGCACCTGTTGTGGTCTAGATGAAGGCCGTGCTATTCTCAAAGAGTGCATAATTTGTGGAGCGTACGGTGACCACTGGCCTAGATGGTGCCCACGCAACAATCGAGTCGACAAGAAACTTTTGGACCTTCCTCCTGGTGTCTTTCACGTGGATTTCTCACGCGGCACTAGTGCTCCTGCTTCGTATTGTTCGGGAAAAGTTGAACAGAAGGAGCCTGCAAAGCCAGCTTCAGTTGAGAGCAATGCTGTCAAAGATGATGACCCAGAGCCTGGATCTAAGAGAAGAGCCCAAGCCTCTGCATCAGCTAAAACTCCAGTTTCTGCTCAGAAGGCAAATATAGATACTGGTACATCCAGTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

255

Amino Acids

27.73

Weight (kDa)

8.56

Isoelectric Point (pI)

56.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000181)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02310 FvH4_1g02340 FvH4_1g02340 FvH4_1g02340 FvH4_3g13110 FvH4_4g04530 FvH4_5g26960 FvH4_5g26990 FvH4_6g01091 FvH4_6g08071 FvH4_6g19630 FvH4_6g38111 FvH4_6g38112 FvH4_6g48801 FvH4_6g48810 FvH4_6g48861 FvH4_6g49020 FvH4_6g49040 FvH4_6g49040 FvH4_6g49060 FvH4_6g49070 FvH4_6g49070 FvH4_6g49870 FvH4_6g49880
malus_domestica MD05G1007300.v1.1 MD05G1007600.v1.1 MD08G1121900.v1.1 MD08G1122000.v1.1 MD08G1122200.v1.1 MD08G1122700.v1.1
prunus_persica Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G187100_v2.0.a1 Prupe.2G227700_v2.0.a1 Prupe.2G227800_v2.0.a1 Prupe.2G227900_v2.0.a1 Prupe.4G043000_v2.0.a1 Prupe.4G046400_v2.0.a1 Prupe.4G077400_v2.0.a1 Prupe.4G077500_v2.0.a1 Prupe.4G159200_v2.0.a1 Prupe.4G159300_v2.0.a1 Prupe.4G159500_v2.0.a1 Prupe.6G311400_v2.0.a1 Prupe.6G311400_v2.0.a1
pyrus_communis pycom05g00390 pycom07g27750 pycom08g10150 pycom08g10170
rosa_chinensis RchiOBHm_Chr1g0328161 RchiOBHm_Chr1g0372961 RchiOBHm_Chr2g0131001 RchiOBHm_Chr2g0151211 RchiOBHm_Chr2g0151231 RchiOBHm_Chr2g0151281 RchiOBHm_Chr2g0151321 RchiOBHm_Chr2g0170041 RchiOBHm_Chr3g0457761 RchiOBHm_Chr3g0457871 RchiOBHm_Chr5g0014841 RchiOBHm_Chr5g0021371 RchiOBHm_Chr5g0038581 RchiOBHm_Chr5g0038691 RchiOBHm_Chr5g0038761 RchiOBHm_Chr6g0246131 RchiOBHm_Chr6g0246181
rosa_laevigata RLG00000015270 RLG00000020541 RLG00000021919 RLG00000025188 RLG00000032146 RLG00000032147 RLG00000032607 RLG00000033860
rosa_multiflora Rmu_sc0001102.1_g000003 Rmu_sc0002298.1_g000007 Rmu_sc0002516.1_g000005 Rmu_sc0002516.1_g000013 Rmu_sc0003629.1_g000050 Rmu_sc0023055.1_g000001
rosa_roxburghii Rroxscaffold_1G00042380 Rroxscaffold_1G00042450 Rroxscaffold_1G00042460 Rroxscaffold_1G00042550 Rroxscaffold_1G00061700 Rroxscaffold_1G00061730 Rroxscaffold_1G00063310 Rroxscaffold_1G00065700 Rroxscaffold_2G00096530 Rroxscaffold_2G00096560 Rroxscaffold_2G00096590 Rroxscaffold_2G00096660 Rroxscaffold_2G00101110 Rroxscaffold_2G00113390 Rroxscaffold_5G00339030 Rroxscaffold_5G00351680 Rroxscaffold_6G00421510 Rroxscaffold_7G00168250 Rroxscaffold_7G00214760 Rroxscaffold_7G00214840
rosa_rugosa Rorug02G0294400 Rorug02G0545100 Rorug05G0008000 Rorug05G0066600 Rorug05G0173700 Rorug05G0173800 Rorug05G0290700 Rorug05G0290800 Rorug05G0290800 Rorug05G0519600 Rorug05G0519700
rosa_samantha Rh1CG087500 Rh1DG094400 Rh2AG570900 Rh2AG612800 Rh2BG354000 Rh2BG498100 Rh2BG498500 Rh2BG498600 Rh2BG628900 Rh2DG372100 Rh2DG509000 Rh2DG509300 Rh2DG509400 Rh2DG509600 Rh2DG640700 Rh3AG083900 Rh3BG086400 Rh3CG086700 Rh5AG102700 Rh5AG259700 Rh5AG261200 Rh5BG098700 Rh5BG098800 Rh5BG099500 Rh5BG113500 Rh5BG113900 Rh5BG155300 Rh5BG264600 Rh5CG111100 Rh5CG125200 Rh5CG169000 Rh5CG297600 Rh5DG098300 Rh5DG272900 Rh6AG033700 Rh6BG028900 Rh6CG029100 Rh6CG029200 Rh6DG028200 Rh6DG028300 Rh7CG429700
rosa_wichuraiana Rw0G009330 Rw0G012230 Rw0G018980 Rw1G008830 Rw2G035660 Rw2G039830 Rw2G040230 Rw2G040240 Rw5G013700 Rw5G024330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 48, 407, 492
AccB7I CCANNNNNTGG 1 cut(s) 674
AccI GTMKAC 1 cut(s) 513
AccII CGCG 1 cut(s) 567
AciI CCGC 5 cut(s) 19, 106, 109, 158, 567
AclWI GGATC 3 cut(s) 143, 392, 685
AcuI CTGAAG 2 cut(s) 216, 618
AcvI CACGTG 1 cut(s) 553
AcyI GRCGYC 1 cut(s) 49
AfaI GTAC 4 cut(s) 295, 303, 470, 754
AfiI CCNNNNNNNGG 5 cut(s) 34, 118, 158, 404, 674
AflIII ACRYGT 1 cut(s) 334
AgsI TTSAA 2 cut(s) 68, 608
AhlI ACTAGT 2 cut(s) 373, 572
AjiI CACGTC 1 cut(s) 335
AjnI CCWGG 5 cut(s) 33, 204, 361, 538, 673
AluBI AGCT 4 cut(s) 95, 268, 632, 710
AluI AGCT 4 cut(s) 95, 268, 632, 710
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 2 cut(s) 12, 325
AlwI GGATC 3 cut(s) 143, 392, 685
AlwNI CAGNNNCTG 2 cut(s) 674, 725
Ama87I CYCGRG 1 cut(s) 117
AoxI GGCC 3 cut(s) 358, 430, 482
ApeKI GCWGC 2 cut(s) 95, 209
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 3 cut(s) 31, 359, 529
AsuC2I CCSGG 3 cut(s) 29, 118, 119
AsuHPI GGTGA 2 cut(s) 218, 485
AvaI CYCGRG 1 cut(s) 117
AvaII GGWCC 2 cut(s) 31, 529
BaeGI GKGCMC 2 cut(s) 164, 497
BanI GGYRCC 3 cut(s) 48, 407, 492
BanII GRGCYC 1 cut(s) 694
BauI CACGAG 1 cut(s) 328
BbrPI CACGTG 1 cut(s) 553
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 2 cut(s) 82, 196
BccI CCATC 2 cut(s) 160, 483
BceAI ACGGC 2 cut(s) 83, 417
BciT130I CCWGG 5 cut(s) 35, 206, 363, 540, 675
BcnI CCSGG 3 cut(s) 29, 118, 119
BcoDI GTCTC 2 cut(s) 12, 325
BcuI ACTAGT 2 cut(s) 373, 572
BfaI CTAG 4 cut(s) 374, 422, 486, 573
BfoI RGCGCY 1 cut(s) 52
BisI GCNGC 4 cut(s) 96, 109, 210, 568
BlsI GCNGC 4 cut(s) 97, 110, 211, 569
Bme1390I CCNGG 8 cut(s) 29, 35, 118, 119, 206, 363, 540, 675
Bme18I GGWCC 2 cut(s) 31, 529
BmeT110I CYCGRG 1 cut(s) 117
BmgBI CACGTC 1 cut(s) 335
BmgT120I GGNCC 3 cut(s) 31, 359, 529
BmiI GGNNCC 5 cut(s) 32, 50, 409, 494, 618
BmrFI CCNGG 8 cut(s) 29, 35, 118, 119, 206, 363, 540, 675
BmsI GCATC 3 cut(s) 238, 323, 713
BpmI CTGGAG 1 cut(s) 702
BpuMI CCSGG 3 cut(s) 29, 118, 119
BsaAI YACGTR 1 cut(s) 553
BsaHI GRCGYC 1 cut(s) 49
BsaJI CCNNGG 3 cut(s) 117, 204, 361
BsaXI ACNNNNNCTCC 4 cut(s) 252, 282, 562, 592
Bsc4I CCNNNNNNNGG 5 cut(s) 34, 118, 158, 404, 674
Bse1I ACTGG 4 cut(s) 485, 719, 754, 759
Bse3DI GCAATG 1 cut(s) 652
BseBI CCWGG 5 cut(s) 35, 206, 363, 540, 675
BseDI CCNNGG 3 cut(s) 117, 204, 361
BseGI GGATG 1 cut(s) 755
BseLI CCNNNNNNNGG 5 cut(s) 34, 118, 158, 404, 674
BseMI GCAATG 1 cut(s) 652
BseMII CTCAG 1 cut(s) 743
BseNI ACTGG 4 cut(s) 485, 719, 754, 759
BseRI GAGGAG 1 cut(s) 213
BseSI GKGCMC 2 cut(s) 164, 497
BseXI GCAGC 2 cut(s) 82, 196
Bsh1236I CGCG 1 cut(s) 567
BshFI GGCC 3 cut(s) 360, 432, 484
BshNI GGYRCC 3 cut(s) 48, 407, 492
BsiHKAI GWGCWC 1 cut(s) 580
BsiHKCI CYCGRG 1 cut(s) 117
BsiSI CCGG 2 cut(s) 28, 118
BsiWI CGTACG 1 cut(s) 468
BslFI GGGAC 2 cut(s) 44, 323
BslI CCNNNNNNNGG 5 cut(s) 34, 118, 158, 404, 674
BsmAI GTCTC 2 cut(s) 12, 325
BsmBI CGTCTC 2 cut(s) 12, 325
BsmFI GGGAC 2 cut(s) 44, 323
BsmI GAATGC 1 cut(s) 352
BsnI GGCC 3 cut(s) 360, 432, 484
BsoBI CYCGRG 1 cut(s) 117
Bsp1286I GDGCHC 4 cut(s) 164, 497, 580, 694
Bsp1407I TGTACA 1 cut(s) 293
Bsp143I GATC 3 cut(s) 148, 384, 677
BspACI CCGC 5 cut(s) 19, 106, 109, 158, 567
BspANI GGCC 3 cut(s) 360, 432, 484
BspCNI CTCAG 1 cut(s) 742
BspFNI CGCG 1 cut(s) 567
BspLI GGNNCC 5 cut(s) 32, 50, 409, 494, 618
BspPI GGATC 3 cut(s) 143, 392, 685
BspQI GCTCTTC 1 cut(s) 682
BspT107I GGYRCC 3 cut(s) 48, 407, 492
BsrDI GCAATG 1 cut(s) 652
BsrGI TGTACA 1 cut(s) 293
BsrI ACTGG 4 cut(s) 485, 719, 754, 759
BssECI CCNNGG 3 cut(s) 117, 204, 361
BssMI GATC 3 cut(s) 148, 384, 677
BssNI GRCGYC 1 cut(s) 49
BssSI CACGAG 1 cut(s) 328
Bst2BI CACGAG 1 cut(s) 328
Bst2UI CCWGG 5 cut(s) 35, 206, 363, 540, 675
Bst4CI ACNGT 3 cut(s) 136, 308, 473
Bst6I CTCTTC 1 cut(s) 682
BstACI GRCGYC 1 cut(s) 49
BstAUI TGTACA 1 cut(s) 293
BstBAI YACGTR 1 cut(s) 553
BstC8I GCNNGC 3 cut(s) 160, 621, 630
BstDEI CTNAG 2 cut(s) 681, 729
BstEII GGTNACC 1 cut(s) 473
BstF5I GGATG 1 cut(s) 755
BstFNI CGCG 1 cut(s) 567
BstH2I RGCGCY 1 cut(s) 52
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 3 cut(s) 151, 387, 680
BstMAI GTCTC 2 cut(s) 12, 325
BstMBI GATC 3 cut(s) 148, 384, 677
BstMWI GCNNNNNNNGC 4 cut(s) 206, 625, 629, 734
BstNI CCWGG 5 cut(s) 35, 206, 363, 540, 675
BstPI GGTNACC 1 cut(s) 473
BstSCI CCNGG 8 cut(s) 27, 33, 116, 117, 204, 361, 538, 673
BstSLI GKGCMC 2 cut(s) 164, 497
BstUI CGCG 1 cut(s) 567
BstV1I GCAGC 2 cut(s) 82, 196
BstX2I RGATCY 3 cut(s) 148, 384, 677
BstYI RGATCY 3 cut(s) 148, 384, 677
BsuRI GGCC 3 cut(s) 360, 432, 484
BtrI CACGTC 1 cut(s) 335
BtsCI GGATG 1 cut(s) 755
BtsIMutI CAGTG 1 cut(s) 478
Cac8I GCNNGC 3 cut(s) 160, 621, 630
CaiI CAGNNNCTG 2 cut(s) 674, 725
CfoI GCGC 1 cut(s) 51
Cfr13I GGNCC 3 cut(s) 31, 359, 529
Cfr9I CCCGGG 1 cut(s) 117
Csp6I GTAC 4 cut(s) 294, 302, 469, 753
CviQI GTAC 4 cut(s) 294, 302, 469, 753
DdeI CTNAG 2 cut(s) 681, 729
DinI GGCGCC 1 cut(s) 50
DpnI GATC 3 cut(s) 150, 386, 679
DpnII GATC 3 cut(s) 148, 384, 677
Eam1104I CTCTTC 1 cut(s) 682
EarI CTCTTC 1 cut(s) 682
EciI GGCGGA 1 cut(s) 95
Eco24I GRGCYC 1 cut(s) 694
Eco47I GGWCC 2 cut(s) 31, 529
Eco57I CTGAAG 2 cut(s) 216, 618
Eco72I CACGTG 1 cut(s) 553
Eco88I CYCGRG 1 cut(s) 117
Eco91I GGTNACC 1 cut(s) 473
EcoO109I RGGNCCY 1 cut(s) 31
EcoO65I GGTNACC 1 cut(s) 473
EcoRII CCWGG 5 cut(s) 33, 204, 361, 538, 673
EcoT22I ATGCAT 1 cut(s) 253
EcoT38I GRGCYC 1 cut(s) 694
EgeI GGCGCC 1 cut(s) 50
EheI GGCGCC 1 cut(s) 50
Esp3I CGTCTC 2 cut(s) 12, 325
FaiI YATR 6 cut(s) 253, 255, 260, 287, 455, 743
FaqI GGGAC 2 cut(s) 44, 323
FauI CCCGC 2 cut(s) 12, 151
FblI GTMKAC 1 cut(s) 513
Fnu4HI GCNGC 4 cut(s) 96, 109, 210, 568
FokI GGATG 1 cut(s) 742
FriOI GRGCYC 1 cut(s) 694
Fsp4HI GCNGC 4 cut(s) 96, 109, 210, 568
FspBI CTAG 4 cut(s) 374, 422, 486, 573
GlaI GCGC 1 cut(s) 50
GluI GCNGC 4 cut(s) 96, 109, 210, 568
GsuI CTGGAG 1 cut(s) 702
HaeII RGCGCY 1 cut(s) 52
HaeIII GGCC 3 cut(s) 360, 432, 484
HapII CCGG 2 cut(s) 28, 118
HhaI GCGC 1 cut(s) 51
Hin1I GRCGYC 1 cut(s) 49
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HinfI GANTC 5 cut(s) 68, 78, 142, 220, 510
HpaII CCGG 2 cut(s) 28, 118
HphI GGTGA 2 cut(s) 218, 485
Hpy166II GTNNAC 3 cut(s) 304, 371, 514
Hpy188I TCNGA 1 cut(s) 732
Hpy188III TCNNGA 4 cut(s) 128, 146, 422, 597
Hpy8I GTNNAC 3 cut(s) 304, 371, 514
HpyAV CCTTC 4 cut(s) 422, 542, 607, 727
HpyCH4III ACNGT 3 cut(s) 136, 308, 473
HpyCH4IV ACGT 2 cut(s) 334, 552
HpyCH4V TGCA 6 cut(s) 251, 314, 350, 453, 623, 704
HpyF10VI GCNNNNNNNGC 4 cut(s) 206, 625, 629, 734
HpyF3I CTNAG 2 cut(s) 681, 729
HpySE526I ACGT 2 cut(s) 334, 552
Hsp92I GRCGYC 1 cut(s) 49
HspAI GCGC 1 cut(s) 49
KasI GGCGCC 1 cut(s) 48
Kzo9I GATC 3 cut(s) 148, 384, 677
LguI GCTCTTC 1 cut(s) 682
LmnI GCTCC 6 cut(s) 217, 273, 326, 464, 583, 616
Lsp1109I GCAGC 2 cut(s) 82, 196
LweI GCATC 3 cut(s) 238, 323, 713
MaeI CTAG 4 cut(s) 374, 422, 486, 573
MaeII ACGT 2 cut(s) 334, 552
MaeIII GTNAC 1 cut(s) 473
MalI GATC 3 cut(s) 150, 386, 679
MboI GATC 3 cut(s) 148, 384, 677
MboII GAAGA 2 cut(s) 151, 699
MflI RGATCY 3 cut(s) 148, 384, 677
MhlI GDGCHC 4 cut(s) 164, 497, 580, 694
MluCI AATT 1 cut(s) 456
Mly113I GGCGCC 1 cut(s) 49
MlyI GAGTC 2 cut(s) 214, 519
MnlI CCTC 5 cut(s) 122, 193, 234, 546, 709
Mph1103I ATGCAT 1 cut(s) 253
MseI TTAA 1 cut(s) 233
MspA1I CMGCKG 1 cut(s) 95
MspI CCGG 2 cut(s) 28, 118
MspR9I CCNGG 8 cut(s) 29, 35, 118, 119, 206, 363, 540, 675
Mva1269I GAATGC 1 cut(s) 352
MvaI CCWGG 5 cut(s) 35, 206, 363, 540, 675
MvnI CGCG 1 cut(s) 567
MwoI GCNNNNNNNGC 4 cut(s) 206, 625, 629, 734
NarI GGCGCC 1 cut(s) 49
NciI CCSGG 3 cut(s) 29, 118, 119
NdeII GATC 3 cut(s) 148, 384, 677
NlaIV GGNNCC 5 cut(s) 32, 50, 409, 494, 618
NmuCI GTSAC 1 cut(s) 473
NsiI ATGCAT 1 cut(s) 253
PciSI GCTCTTC 1 cut(s) 682
PcsI WCGNNNNNNNCGW 1 cut(s) 505
PctI GAATGC 1 cut(s) 352
PfeI GAWTC 3 cut(s) 68, 78, 142
Pfl23II CGTACG 1 cut(s) 468
PflMI CCANNNNNTGG 1 cut(s) 674
PfoI TCCNGGA 1 cut(s) 27
PkrI GCNGC 4 cut(s) 97, 110, 211, 569
PleI GAGTC 2 cut(s) 214, 518
PluTI GGCGCC 1 cut(s) 52
PmaCI CACGTG 1 cut(s) 553
PmlI CACGTG 1 cut(s) 553
PpsI GAGTC 2 cut(s) 214, 518
Ppu21I YACGTR 1 cut(s) 553
PpuMI RGGWCCY 1 cut(s) 31
Psp5II RGGWCCY 1 cut(s) 31
Psp6I CCWGG 5 cut(s) 33, 204, 361, 538, 673
PspCI CACGTG 1 cut(s) 553
PspEI GGTNACC 1 cut(s) 473
PspGI CCWGG 5 cut(s) 33, 204, 361, 538, 673
PspLI CGTACG 1 cut(s) 468
PspN4I GGNNCC 5 cut(s) 32, 50, 409, 494, 618
PspPI GGNCC 3 cut(s) 31, 359, 529
PspPPI RGGWCCY 1 cut(s) 31
PstNI CAGNNNCTG 2 cut(s) 674, 725
PsuI RGATCY 3 cut(s) 148, 384, 677
PvuII CAGCTG 1 cut(s) 95
RsaI GTAC 4 cut(s) 295, 303, 470, 754
RsaNI GTAC 4 cut(s) 294, 302, 469, 753
SalI GTCGAC 1 cut(s) 512
SapI GCTCTTC 1 cut(s) 682
SaqAI TTAA 1 cut(s) 233
SatI GCNGC 4 cut(s) 96, 109, 210, 568
Sau3AI GATC 3 cut(s) 148, 384, 677
Sau96I GGNCC 3 cut(s) 31, 359, 529
SchI GAGTC 2 cut(s) 214, 519
ScrFI CCNGG 8 cut(s) 29, 35, 118, 119, 206, 363, 540, 675
SduI GDGCHC 4 cut(s) 164, 497, 580, 694
SfaNI GCATC 3 cut(s) 238, 323, 713
SfoI GGCGCC 1 cut(s) 50
SinI GGWCC 2 cut(s) 31, 529
SmaI CCCGGG 1 cut(s) 119
SpeI ACTAGT 2 cut(s) 373, 572
Sse9I AATT 1 cut(s) 456
SsiI CCGC 5 cut(s) 19, 106, 109, 158, 567
SspDI GGCGCC 1 cut(s) 48
SspMI CTAG 4 cut(s) 374, 422, 486, 573
StyD4I CCNGG 8 cut(s) 27, 33, 116, 117, 204, 361, 538, 673
TaaI ACNGT 3 cut(s) 136, 308, 473
TaiI ACGT 2 cut(s) 337, 555
TaqI TCGA 2 cut(s) 508, 513
TasI AATT 1 cut(s) 456
TatI WGTACW 1 cut(s) 293
TauI GCSGC 2 cut(s) 111, 570
TfiI GAWTC 3 cut(s) 68, 78, 142
Tru1I TTAA 1 cut(s) 233
Tru9I TTAA 1 cut(s) 233
TscAI CASTG 1 cut(s) 485
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 2 cut(s) 95, 209
Tsp45I GTSAC 1 cut(s) 473
TspDTI ATGAA 1 cut(s) 441
TspGWI ACGGA 2 cut(s) 71, 387
TspMI CCCGGG 1 cut(s) 117
TspRI CASTG 1 cut(s) 485
Van91I CCANNNNNTGG 1 cut(s) 674
VpaK11BI GGWCC 2 cut(s) 31, 529
XbaI TCTAGA 1 cut(s) 421
XmaI CCCGGG 1 cut(s) 117
XmiI GTMKAC 1 cut(s) 513
XspI CTAG 4 cut(s) 374, 422, 486, 573
Zsp2I ATGCAT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.