Rorug05G0066600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000181
Physical Location & Seq
Forward (+)
5729651 .. 5731893
2243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0066600.1

Sequence Viewer

Length: 1038 bp
ATGGGTGTAGACTACTACAAGCTTTTACAGGTAGAAAAGAGCGCCACAGAAGATGAACTGAAGAAGGCTTACAGAAAATTGGCTATGAAGTGGCACCCTGATAAGAACCCCACCAATAAGAAAGAAGCTGAGACCAAATTCAAGCAGATCTCTGAGGCCTATGAGGTTCTGAGTGATCCACAGAAAAGAGCAATCTATGATCAGTATGGTGAAGAAGGCCTTAAGGGCGGCATTCCGCCTCCAGATGCTGGGGGGCCTGGTGGTGCCACGTATTTCCAAACTGGAGATGGTCCAAATGTGTTTAGATTCAACCCCAGGAATGCCAACGACATTTTTGCAGAGATCTTCGGGTTCTCTAGCCCGATGGGTGGTGGAATGGGAGGAGGTGGTTTTGGTAGTGGCATGAGGGGTGGAAGATCATCCTTTGGTGGAATGTTTGGGGATGACATGTTTAGTTCTTTTGGAGAAGGCAGACCGATGAGTCAGGGACCAAGAAAAGCTTCTCCTTTGGAGAGGAAGTTGCCGTGTAGTCTTGAGGAGCTCTATAAGGGAACCACAAAGAAGATGAAGATATCTAGGGAAATCGCAGATGCAAGTGGGAGGACATTGCCGGTGGAGGAAATCTTGACCATTGAGGTCAAGCCTGGCTGGAAAAAAGGAACAAAGATCACTTTCCCAGAGAAGGGGAATGAGCGTCCAAACGAAGTTCCTGCAGATCTTGTATTCATAATCGATGAGAAACCACACAGCACATTCACAAGGGATGGGAACGACCTGGTGGTAACACAGAAGATCTCGCTGGCAGAAGCACTAGCAGGTTACACACTGCATCTCACCACACTAGATGGGAGGACCCTCACCATCCCCATCAACACTGTCATTCATCCAAACTACGAGGAGATAGTCCCTCGGGAGGGTATGCCTATACCAAAAGATCCCTCCAAGAAGGGCAACCTTAGAGTGAAATTCAACATCAAATTTCCAACTAGGTTGACTTCTGAACAGAAGGCTGGAATCAAGAAACTTTTGGCTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

345

Amino Acids

37.92

Weight (kDa)

9.15

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 4 - 67 8.3e-29 DnaJ domain
DnaJ_C PF01556 171 - 328 1.9e-39 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000181)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02310 FvH4_1g02340 FvH4_1g02340 FvH4_1g02340 FvH4_3g13110 FvH4_4g04530 FvH4_5g26960 FvH4_5g26990 FvH4_6g01091 FvH4_6g08071 FvH4_6g19630 FvH4_6g38111 FvH4_6g38112 FvH4_6g48801 FvH4_6g48810 FvH4_6g48861 FvH4_6g49020 FvH4_6g49040 FvH4_6g49040 FvH4_6g49060 FvH4_6g49070 FvH4_6g49070 FvH4_6g49870 FvH4_6g49880
malus_domestica MD05G1007300.v1.1 MD05G1007600.v1.1 MD08G1121900.v1.1 MD08G1122000.v1.1 MD08G1122200.v1.1 MD08G1122700.v1.1
prunus_persica Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G019700_v2.0.a1 Prupe.1G187100_v2.0.a1 Prupe.2G227700_v2.0.a1 Prupe.2G227800_v2.0.a1 Prupe.2G227900_v2.0.a1 Prupe.4G043000_v2.0.a1 Prupe.4G046400_v2.0.a1 Prupe.4G077400_v2.0.a1 Prupe.4G077500_v2.0.a1 Prupe.4G159200_v2.0.a1 Prupe.4G159300_v2.0.a1 Prupe.4G159500_v2.0.a1 Prupe.6G311400_v2.0.a1 Prupe.6G311400_v2.0.a1
pyrus_communis pycom05g00390 pycom07g27750 pycom08g10150 pycom08g10170
rosa_chinensis RchiOBHm_Chr1g0328161 RchiOBHm_Chr1g0372961 RchiOBHm_Chr2g0131001 RchiOBHm_Chr2g0151211 RchiOBHm_Chr2g0151231 RchiOBHm_Chr2g0151281 RchiOBHm_Chr2g0151321 RchiOBHm_Chr2g0170041 RchiOBHm_Chr3g0457761 RchiOBHm_Chr3g0457871 RchiOBHm_Chr5g0014841 RchiOBHm_Chr5g0021371 RchiOBHm_Chr5g0038581 RchiOBHm_Chr5g0038691 RchiOBHm_Chr5g0038761 RchiOBHm_Chr6g0246131 RchiOBHm_Chr6g0246181
rosa_laevigata RLG00000015270 RLG00000020541 RLG00000021919 RLG00000025188 RLG00000032146 RLG00000032147 RLG00000032607 RLG00000033860
rosa_multiflora Rmu_sc0001102.1_g000003 Rmu_sc0002298.1_g000007 Rmu_sc0002516.1_g000005 Rmu_sc0002516.1_g000013 Rmu_sc0003629.1_g000050 Rmu_sc0023055.1_g000001
rosa_roxburghii Rroxscaffold_1G00042380 Rroxscaffold_1G00042450 Rroxscaffold_1G00042460 Rroxscaffold_1G00042550 Rroxscaffold_1G00061700 Rroxscaffold_1G00061730 Rroxscaffold_1G00063310 Rroxscaffold_1G00065700 Rroxscaffold_2G00096530 Rroxscaffold_2G00096560 Rroxscaffold_2G00096590 Rroxscaffold_2G00096660 Rroxscaffold_2G00101110 Rroxscaffold_2G00113390 Rroxscaffold_5G00339030 Rroxscaffold_5G00351680 Rroxscaffold_6G00421510 Rroxscaffold_7G00168250 Rroxscaffold_7G00214760 Rroxscaffold_7G00214840
rosa_rugosa Rorug02G0294400 Rorug02G0545100 Rorug05G0008000 Rorug05G0066600 Rorug05G0173700 Rorug05G0173800 Rorug05G0290700 Rorug05G0290800 Rorug05G0290800 Rorug05G0519600 Rorug05G0519700
rosa_samantha Rh1CG087500 Rh1DG094400 Rh2AG570900 Rh2AG612800 Rh2BG354000 Rh2BG498100 Rh2BG498500 Rh2BG498600 Rh2BG628900 Rh2DG372100 Rh2DG509000 Rh2DG509300 Rh2DG509400 Rh2DG509600 Rh2DG640700 Rh3AG083900 Rh3BG086400 Rh3CG086700 Rh5AG102700 Rh5AG259700 Rh5AG261200 Rh5BG098700 Rh5BG098800 Rh5BG099500 Rh5BG113500 Rh5BG113900 Rh5BG155300 Rh5BG264600 Rh5CG111100 Rh5CG125200 Rh5CG169000 Rh5CG297600 Rh5DG098300 Rh5DG272900 Rh6AG033700 Rh6BG028900 Rh6CG029100 Rh6CG029200 Rh6DG028200 Rh6DG028300 Rh7CG429700
rosa_wichuraiana Rw0G009330 Rw0G012230 Rw0G018980 Rw1G008830 Rw2G035660 Rw2G039830 Rw2G040230 Rw2G040240 Rw5G013700 Rw5G024330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 480
Acc36I ACCTGC 1 cut(s) 806
AccB1I GGYRCC 2 cut(s) 93, 263
AccB7I CCANNNNNTGG 1 cut(s) 248
AccI GTMKAC 1 cut(s) 9
AciI CCGC 2 cut(s) 228, 236
AclWI GGATC 2 cut(s) 170, 929
AcsI RAATTY 3 cut(s) 137, 965, 977
AcuI CTGAAG 1 cut(s) 80
AfiI CCNNNNNNNGG 6 cut(s) 248, 368, 682, 683, 913, 914
AflII CTTAAG 1 cut(s) 221
AflIII ACRYGT 1 cut(s) 447
AgsI TTSAA 3 cut(s) 142, 310, 970
AjnI CCWGG 4 cut(s) 256, 314, 643, 774
AjuI GAANNNNNNNTTGG 2 cut(s) 484, 516
AluBI AGCT 4 cut(s) 22, 128, 500, 541
AluI AGCT 4 cut(s) 22, 128, 500, 541
Alw21I GWGCWC 1 cut(s) 543
Alw26I GTCTC 1 cut(s) 125
AlwI GGATC 2 cut(s) 170, 929
AlwNI CAGNNNCTG 1 cut(s) 248
Ama87I CYCGRG 1 cut(s) 909
AoxI GGCC 3 cut(s) 156, 217, 254
ApeKI GCWGC 1 cut(s) 1031
ApoI RAATTY 3 cut(s) 137, 965, 977
Asp700I GAANNNNTTC 1 cut(s) 499
AspLEI GCGC 1 cut(s) 44
AspS9I GGNCC 4 cut(s) 254, 290, 488, 852
AsuHPI GGTGA 3 cut(s) 221, 826, 850
AvaI CYCGRG 1 cut(s) 909
AvaII GGWCC 3 cut(s) 290, 488, 852
BanI GGYRCC 2 cut(s) 93, 263
BanII GRGCYC 1 cut(s) 543
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
Bbv12I GWGCWC 1 cut(s) 543
BbvI GCAGC 1 cut(s) 1018
BccI CCATC 6 cut(s) 281, 358, 758, 839, 869, 875
BceAI ACGGC 1 cut(s) 508
BcgI CGANNNNNNTGC 4 cut(s) 317, 351, 692, 726
BciT130I CCWGG 4 cut(s) 258, 316, 645, 776
BclI TGATCA 1 cut(s) 199
BcoDI GTCTC 1 cut(s) 125
BfaI CTAG 5 cut(s) 357, 576, 812, 842, 987
BfmI CTRYAG 1 cut(s) 711
BfoI RGCGCY 1 cut(s) 45
BfrI CTTAAG 1 cut(s) 221
BfuAI ACCTGC 1 cut(s) 806
BglI GCCNNNNNGGC 1 cut(s) 225
BglII AGATCT 4 cut(s) 147, 342, 715, 792
BisI GCNGC 2 cut(s) 229, 1032
BlsI GCNGC 2 cut(s) 230, 1033
Bme1390I CCNGG 4 cut(s) 258, 316, 645, 776
Bme18I GGWCC 3 cut(s) 290, 488, 852
BmeT110I CYCGRG 1 cut(s) 909
BmgT120I GGNCC 4 cut(s) 254, 290, 488, 852
BmiI GGNNCC 6 cut(s) 95, 255, 265, 489, 553, 854
BmrFI CCNGG 4 cut(s) 258, 316, 645, 776
BmsI GCATC 3 cut(s) 235, 580, 838
BpmI CTGGAG 2 cut(s) 225, 303
BpuEI CTTGAG 1 cut(s) 554
Bsa29I ATCGAT 1 cut(s) 732
BsaAI YACGTR 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 2 cut(s) 314, 908
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bsc4I CCNNNNNNNGG 6 cut(s) 248, 368, 682, 683, 913, 914
Bse118I RCCGGY 1 cut(s) 610
Bse1I ACTGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 605
BseBI CCWGG 4 cut(s) 258, 316, 645, 776
BseCI ATCGAT 1 cut(s) 732
BseDI CCNNGG 2 cut(s) 314, 908
BseGI GGATG 5 cut(s) 419, 448, 769, 861, 883
BseLI CCNNNNNNNGG 6 cut(s) 248, 368, 682, 683, 913, 914
BseMI GCAATG 1 cut(s) 605
BseMII CTCAG 3 cut(s) 120, 144, 161
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 3 cut(s) 396, 551, 911
BseXI GCAGC 1 cut(s) 1018
BseYI CCCAGC 1 cut(s) 248
BshFI GGCC 3 cut(s) 158, 219, 256
BshNI GGYRCC 2 cut(s) 93, 263
BshVI ATCGAT 1 cut(s) 732
BsiHKAI GWGCWC 1 cut(s) 543
BsiHKCI CYCGRG 1 cut(s) 909
BsiSI CCGG 1 cut(s) 611
BslFI GGGAC 2 cut(s) 501, 890
BslI CCNNNNNNNGG 6 cut(s) 248, 368, 682, 683, 913, 914
BsmAI GTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 501, 890
BsmI GAATGC 2 cut(s) 231, 325
BsnI GGCC 3 cut(s) 158, 219, 256
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 1 cut(s) 909
Bsp1286I GDGCHC 1 cut(s) 543
Bsp143I GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
BspACI CCGC 2 cut(s) 228, 236
BspANI GGCC 3 cut(s) 158, 219, 256
BspCNI CTCAG 3 cut(s) 121, 145, 162
BspDI ATCGAT 1 cut(s) 732
BspLI GGNNCC 6 cut(s) 95, 255, 265, 489, 553, 854
BspMAI CTGCAG 1 cut(s) 715
BspMI ACCTGC 1 cut(s) 806
BspPI GGATC 2 cut(s) 170, 929
BspT107I GGYRCC 2 cut(s) 93, 263
BspTI CTTAAG 1 cut(s) 221
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 605
BsrFI RCCGGY 1 cut(s) 610
BsrI ACTGG 1 cut(s) 286
BssAI RCCGGY 1 cut(s) 610
BssECI CCNNGG 2 cut(s) 314, 908
BssMI GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
Bst2UI CCWGG 4 cut(s) 258, 316, 645, 776
Bst4CI ACNGT 1 cut(s) 877
BstAFI CTTAAG 1 cut(s) 221
BstBAI YACGTR 1 cut(s) 270
BstC8I GCNNGC 1 cut(s) 801
BstDEI CTNAG 4 cut(s) 129, 153, 170, 956
BstF5I GGATG 5 cut(s) 419, 448, 769, 861, 883
BstH2I RGCGCY 1 cut(s) 45
BstHHI GCGC 1 cut(s) 44
BstKTI GATC 9 cut(s) 150, 178, 202, 345, 419, 669, 718, 795, 937
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
BstMWI GCNNNNNNNGC 1 cut(s) 225
BstNI CCWGG 4 cut(s) 258, 316, 645, 776
BstNSI RCATGY 1 cut(s) 451
BstSCI CCNGG 4 cut(s) 256, 314, 643, 774
BstSFI CTRYAG 1 cut(s) 711
BstV1I GCAGC 1 cut(s) 1018
BstX2I RGATCY 5 cut(s) 147, 342, 715, 792, 934
BstYI RGATCY 5 cut(s) 147, 342, 715, 792, 934
Bsu15I ATCGAT 1 cut(s) 732
BsuRI GGCC 3 cut(s) 158, 219, 256
BsuTUI ATCGAT 1 cut(s) 732
BtsCI GGATG 5 cut(s) 419, 448, 769, 861, 883
BtsI GCAGTG 1 cut(s) 824
BtsIMutI CAGTG 2 cut(s) 824, 873
BveI ACCTGC 1 cut(s) 806
Cac8I GCNNGC 1 cut(s) 801
CaiI CAGNNNCTG 1 cut(s) 248
CfoI GCGC 1 cut(s) 44
Cfr10I RCCGGY 1 cut(s) 610
Cfr13I GGNCC 4 cut(s) 254, 290, 488, 852
ClaI ATCGAT 1 cut(s) 732
CseI GACGC 1 cut(s) 683
CsiI ACCWGGT 1 cut(s) 774
CviAII CATG 2 cut(s) 403, 448
DdeI CTNAG 4 cut(s) 129, 153, 170, 956
DpnI GATC 9 cut(s) 149, 177, 201, 344, 418, 668, 717, 794, 936
DpnII GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
DrdI GACNNNNNNGTC 1 cut(s) 480
DseDI GACNNNNNNGTC 1 cut(s) 480
EciI GGCGGA 1 cut(s) 225
Ecl136II GAGCTC 1 cut(s) 541
Eco147I AGGCCT 2 cut(s) 158, 219
Eco24I GRGCYC 1 cut(s) 543
Eco31I GGTCTC 1 cut(s) 125
Eco32I GATATC 1 cut(s) 573
Eco47I GGWCC 3 cut(s) 290, 488, 852
Eco53kI GAGCTC 1 cut(s) 541
Eco57I CTGAAG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 909
EcoICRI GAGCTC 1 cut(s) 541
EcoO109I RGGNCCY 2 cut(s) 254, 852
EcoRII CCWGG 4 cut(s) 256, 314, 643, 774
EcoRV GATATC 1 cut(s) 573
EcoT38I GRGCYC 1 cut(s) 543
FaeI CATG 2 cut(s) 406, 451
FalI AAGNNNNNCTT 4 cut(s) 204, 236, 484, 516
FaqI GGGAC 2 cut(s) 501, 890
FatI CATG 2 cut(s) 402, 447
FbaI TGATCA 1 cut(s) 199
FblI GTMKAC 1 cut(s) 9
Fnu4HI GCNGC 2 cut(s) 229, 1032
FokI GGATG 5 cut(s) 406, 455, 776, 848, 870
FriOI GRGCYC 1 cut(s) 543
Fsp4HI GCNGC 2 cut(s) 229, 1032
FspBI CTAG 5 cut(s) 357, 576, 812, 842, 987
GlaI GCGC 1 cut(s) 43
GluI GCNGC 2 cut(s) 229, 1032
GsaI CCCAGC 1 cut(s) 252
GsuI CTGGAG 2 cut(s) 225, 303
HaeII RGCGCY 1 cut(s) 45
HaeIII GGCC 3 cut(s) 158, 219, 256
HapII CCGG 1 cut(s) 611
HgaI GACGC 1 cut(s) 683
HhaI GCGC 1 cut(s) 44
Hin1II CATG 2 cut(s) 406, 451
Hin6I GCGC 1 cut(s) 42
HinP1I GCGC 1 cut(s) 42
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HindIII AAGCTT 2 cut(s) 20, 498
HinfI GANTC 3 cut(s) 306, 481, 1014
HpaII CCGG 1 cut(s) 611
HphI GGTGA 3 cut(s) 221, 826, 850
Hpy166II GTNNAC 2 cut(s) 10, 993
Hpy188I TCNGA 3 cut(s) 154, 171, 1000
Hpy188III TCNNGA 5 cut(s) 242, 533, 625, 911, 1018
Hpy8I GTNNAC 2 cut(s) 10, 993
HpyAV CCTTC 6 cut(s) 58, 209, 461, 676, 940, 1000
HpyCH4III ACNGT 1 cut(s) 877
HpyCH4IV ACGT 1 cut(s) 269
HpyCH4V TGCA 5 cut(s) 338, 593, 713, 829, 1034
HpyF10VI GCNNNNNNNGC 1 cut(s) 225
HpyF3I CTNAG 4 cut(s) 129, 153, 170, 956
HpySE526I ACGT 1 cut(s) 269
Hsp92II CATG 2 cut(s) 406, 451
HspAI GCGC 1 cut(s) 42
Ksp22I TGATCA 1 cut(s) 199
Kzo9I GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
LmnI GCTCC 1 cut(s) 538
Lsp1109I GCAGC 1 cut(s) 1018
LweI GCATC 3 cut(s) 235, 580, 838
MabI ACCWGGT 1 cut(s) 774
MaeI CTAG 5 cut(s) 357, 576, 812, 842, 987
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 2 cut(s) 781, 818
MalI GATC 9 cut(s) 149, 177, 201, 344, 418, 668, 717, 794, 936
MboI GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
MboII GAAGA 8 cut(s) 62, 73, 224, 337, 426, 574, 580, 802
MflI RGATCY 5 cut(s) 147, 342, 715, 792, 934
MhlI GDGCHC 1 cut(s) 543
MluCI AATT 4 cut(s) 77, 137, 965, 977
MlyI GAGTC 1 cut(s) 490
MmeI TCCRAC 1 cut(s) 1007
MroXI GAANNNNTTC 1 cut(s) 499
MseI TTAA 1 cut(s) 222
MspCI CTTAAG 1 cut(s) 221
MspI CCGG 1 cut(s) 611
MspR9I CCNGG 4 cut(s) 258, 316, 645, 776
Mva1269I GAATGC 2 cut(s) 231, 325
MvaI CCWGG 4 cut(s) 258, 316, 645, 776
MwoI GCNNNNNNNGC 1 cut(s) 225
NdeII GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
NlaIII CATG 2 cut(s) 406, 451
NlaIV GGNNCC 6 cut(s) 95, 255, 265, 489, 553, 854
NspI RCATGY 1 cut(s) 451
PceI AGGCCT 2 cut(s) 158, 219
PciI ACATGT 1 cut(s) 447
PctI GAATGC 2 cut(s) 231, 325
PdmI GAANNNNTTC 1 cut(s) 499
PfeI GAWTC 2 cut(s) 306, 1014
PflMI CCANNNNNTGG 1 cut(s) 248
PkrI GCNGC 2 cut(s) 230, 1033
PleI GAGTC 1 cut(s) 489
PpsI GAGTC 1 cut(s) 489
Ppu21I YACGTR 1 cut(s) 270
PpuMI RGGWCCY 1 cut(s) 852
PscI ACATGT 1 cut(s) 447
Psp124BI GAGCTC 1 cut(s) 543
Psp5II RGGWCCY 1 cut(s) 852
Psp6I CCWGG 4 cut(s) 256, 314, 643, 774
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 4 cut(s) 256, 314, 643, 774
PspN4I GGNNCC 6 cut(s) 95, 255, 265, 489, 553, 854
PspPI GGNCC 4 cut(s) 254, 290, 488, 852
PspPPI RGGWCCY 1 cut(s) 852
PstI CTGCAG 1 cut(s) 715
PstNI CAGNNNCTG 1 cut(s) 248
PsuI RGATCY 5 cut(s) 147, 342, 715, 792, 934
SacI GAGCTC 1 cut(s) 543
SaqAI TTAA 1 cut(s) 222
SatI GCNGC 2 cut(s) 229, 1032
Sau3AI GATC 9 cut(s) 147, 175, 199, 342, 416, 666, 715, 792, 934
Sau96I GGNCC 4 cut(s) 254, 290, 488, 852
SchI GAGTC 1 cut(s) 490
ScrFI CCNGG 4 cut(s) 258, 316, 645, 776
SduI GDGCHC 1 cut(s) 543
SexAI ACCWGGT 1 cut(s) 774
SfaNI GCATC 3 cut(s) 235, 580, 838
SfcI CTRYAG 1 cut(s) 711
SinI GGWCC 3 cut(s) 290, 488, 852
SmlI CTYRAG 2 cut(s) 221, 533
SmoI CTYRAG 2 cut(s) 221, 533
Sse9I AATT 4 cut(s) 77, 137, 965, 977
SseBI AGGCCT 2 cut(s) 158, 219
SsiI CCGC 2 cut(s) 228, 236
SspMI CTAG 5 cut(s) 357, 576, 812, 842, 987
SstI GAGCTC 1 cut(s) 543
StuI AGGCCT 2 cut(s) 158, 219
StyD4I CCNGG 4 cut(s) 256, 314, 643, 774
TaaI ACNGT 1 cut(s) 877
TaiI ACGT 1 cut(s) 272
TaqI TCGA 1 cut(s) 732
TaqII GACCGA 1 cut(s) 490
TasI AATT 4 cut(s) 77, 137, 965, 977
TauI GCSGC 1 cut(s) 231
TfiI GAWTC 2 cut(s) 306, 1014
Tru1I TTAA 1 cut(s) 222
Tru9I TTAA 1 cut(s) 222
TscAI CASTG 2 cut(s) 831, 880
TseI GCWGC 1 cut(s) 1031
TspDTI ATGAA 5 cut(s) 69, 101, 581, 715, 872
TspRI CASTG 2 cut(s) 831, 880
Van91I CCANNNNNTGG 1 cut(s) 248
Vha464I CTTAAG 1 cut(s) 221
VpaK11BI GGWCC 3 cut(s) 290, 488, 852
XapI RAATTY 3 cut(s) 137, 965, 977
XceI RCATGY 1 cut(s) 451
XcmI CCANNNNNNNNNTGG 1 cut(s) 284
XmiI GTMKAC 1 cut(s) 9
XmnI GAANNNNTTC 1 cut(s) 499
XspI CTAG 5 cut(s) 357, 576, 812, 842, 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.