Protein TRANSPORT INHIBITOR RESPONSE
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box_5 | PF18511 | 108 - 124 | 1.1e-07 | F-box |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 173 |
| AccB1I | GGYRCC | 1 cut(s) | 173 |
| AccBSI | CCGCTC | 1 cut(s) | 370 |
| AccII | CGCG | 1 cut(s) | 21 |
| AccIII | TCCGGA | 1 cut(s) | 210 |
| AciI | CCGC | 4 cut(s) | 19, 145, 177, 370 |
| AfaI | GTAC | 3 cut(s) | 133, 175, 236 |
| AflIII | ACRYGT | 1 cut(s) | 231 |
| AgsI | TTSAA | 1 cut(s) | 191 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 277 |
| AluBI | AGCT | 2 cut(s) | 98, 251 |
| AluI | AGCT | 2 cut(s) | 98, 251 |
| Alw26I | GTCTC | 2 cut(s) | 2, 171 |
| Aor13HI | TCCGGA | 1 cut(s) | 210 |
| AoxI | GGCC | 1 cut(s) | 221 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 281, 313 |
| Asp718I | GGTACC | 1 cut(s) | 173 |
| AspLEI | GCGC | 1 cut(s) | 23 |
| AspS9I | GGNCC | 1 cut(s) | 222 |
| AsuNHI | GCTAGC | 1 cut(s) | 14 |
| BanI | GGYRCC | 1 cut(s) | 173 |
| BanII | GRGCYC | 1 cut(s) | 306 |
| BauI | CACGAG | 1 cut(s) | 155 |
| BbsI | GAAGAC | 2 cut(s) | 270, 294 |
| BccI | CCATC | 1 cut(s) | 85 |
| BceAI | ACGGC | 1 cut(s) | 334 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 12, 46 |
| BclI | TGATCA | 1 cut(s) | 253 |
| BcoDI | GTCTC | 2 cut(s) | 2, 171 |
| BfaI | CTAG | 3 cut(s) | 15, 105, 194 |
| BisI | GCNGC | 1 cut(s) | 19 |
| BlsI | GCNGC | 1 cut(s) | 20 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 277 |
| BmgT120I | GGNCC | 1 cut(s) | 222 |
| BmiI | GGNNCC | 1 cut(s) | 175 |
| BmrI | ACTGGG | 1 cut(s) | 123 |
| BmtI | GCTAGC | 1 cut(s) | 18 |
| BmuI | ACTGGG | 1 cut(s) | 123 |
| BpiI | GAAGAC | 2 cut(s) | 270, 294 |
| BsaI | GGTCTC | 1 cut(s) | 171 |
| BsaWI | WCCGGW | 3 cut(s) | 210, 237, 324 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| BseAI | TCCGGA | 1 cut(s) | 210 |
| BseMII | CTCAG | 2 cut(s) | 171, 240 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BseRI | GAGGAG | 1 cut(s) | 195 |
| Bsh1236I | CGCG | 1 cut(s) | 21 |
| Bsh1285I | CGRYCG | 1 cut(s) | 325 |
| BshFI | GGCC | 1 cut(s) | 223 |
| BshNI | GGYRCC | 1 cut(s) | 173 |
| BsiEI | CGRYCG | 1 cut(s) | 325 |
| BsiSI | CCGG | 3 cut(s) | 211, 238, 325 |
| BsmAI | GTCTC | 2 cut(s) | 2, 171 |
| BsnI | GGCC | 1 cut(s) | 223 |
| Bso31I | GGTCTC | 1 cut(s) | 171 |
| Bsp1286I | GDGCHC | 1 cut(s) | 306 |
| Bsp13I | TCCGGA | 1 cut(s) | 210 |
| Bsp143I | GATC | 4 cut(s) | 159, 253, 333, 363 |
| BspACI | CCGC | 4 cut(s) | 19, 145, 177, 370 |
| BspANI | GGCC | 1 cut(s) | 223 |
| BspCNI | CTCAG | 2 cut(s) | 172, 239 |
| BspEI | TCCGGA | 1 cut(s) | 210 |
| BspFNI | CGCG | 1 cut(s) | 21 |
| BspLI | GGNNCC | 1 cut(s) | 175 |
| BspOI | GCTAGC | 1 cut(s) | 18 |
| BspT107I | GGYRCC | 1 cut(s) | 173 |
| BspTNI | GGTCTC | 1 cut(s) | 171 |
| BsrBI | CCGCTC | 1 cut(s) | 370 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| BssMI | GATC | 4 cut(s) | 159, 253, 333, 363 |
| BssSI | CACGAG | 1 cut(s) | 155 |
| Bst2BI | CACGAG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| Bst6I | CTCTTC | 1 cut(s) | 280 |
| BstC8I | GCNNGC | 2 cut(s) | 16, 40 |
| BstDEI | CTNAG | 2 cut(s) | 180, 226 |
| BstFNI | CGCG | 1 cut(s) | 21 |
| BstHHI | GCGC | 1 cut(s) | 23 |
| BstKTI | GATC | 4 cut(s) | 162, 256, 336, 366 |
| BstMAI | GTCTC | 2 cut(s) | 2, 171 |
| BstMBI | GATC | 4 cut(s) | 159, 253, 333, 363 |
| BstMCI | CGRYCG | 1 cut(s) | 325 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 48 |
| BstNSI | RCATGY | 1 cut(s) | 235 |
| BstUI | CGCG | 1 cut(s) | 21 |
| BstV2I | GAAGAC | 2 cut(s) | 270, 294 |
| BsuRI | GGCC | 1 cut(s) | 223 |
| BtsIMutI | CAGTG | 3 cut(s) | 61, 87, 111 |
| Cac8I | GCNNGC | 2 cut(s) | 16, 40 |
| CfoI | GCGC | 1 cut(s) | 23 |
| Cfr13I | GGNCC | 1 cut(s) | 222 |
| Csp6I | GTAC | 3 cut(s) | 132, 174, 235 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 100, 135 |
| CviAII | CATG | 3 cut(s) | 125, 170, 232 |
| CviJI | RGCY | 6 cut(s) | 18, 98, 139, 223, 251, 304 |
| CviKI_1 | RGCY | 6 cut(s) | 18, 98, 139, 223, 251, 304 |
| CviQI | GTAC | 3 cut(s) | 132, 174, 235 |
| DdeI | CTNAG | 2 cut(s) | 180, 226 |
| DpnI | GATC | 4 cut(s) | 161, 255, 335, 365 |
| DpnII | GATC | 4 cut(s) | 159, 253, 333, 363 |
| DriI | GACNNNNNGTC | 1 cut(s) | 277 |
| Eam1104I | CTCTTC | 1 cut(s) | 280 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 277 |
| EarI | CTCTTC | 1 cut(s) | 280 |
| Eco24I | GRGCYC | 1 cut(s) | 306 |
| Eco31I | GGTCTC | 1 cut(s) | 171 |
| EcoT38I | GRGCYC | 1 cut(s) | 306 |
| FaeI | CATG | 3 cut(s) | 128, 173, 235 |
| FaiI | YATR | 4 cut(s) | 47, 126, 171, 233 |
| FatI | CATG | 3 cut(s) | 124, 169, 231 |
| FauI | CCCGC | 1 cut(s) | 138 |
| FbaI | TGATCA | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 1 cut(s) | 19 |
| FriOI | GRGCYC | 1 cut(s) | 306 |
| Fsp4HI | GCNGC | 1 cut(s) | 19 |
| FspBI | CTAG | 3 cut(s) | 15, 105, 194 |
| GlaI | GCGC | 1 cut(s) | 22 |
| GluI | GCNGC | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 223 |
| HapII | CCGG | 3 cut(s) | 211, 238, 325 |
| HhaI | GCGC | 1 cut(s) | 23 |
| Hin1II | CATG | 3 cut(s) | 128, 173, 235 |
| Hin6I | GCGC | 1 cut(s) | 21 |
| HinP1I | GCGC | 1 cut(s) | 21 |
| HinfI | GANTC | 5 cut(s) | 70, 86, 197, 202, 272 |
| HpaII | CCGG | 3 cut(s) | 211, 238, 325 |
| Hpy188I | TCNGA | 3 cut(s) | 69, 229, 286 |
| Hpy188III | TCNNGA | 2 cut(s) | 211, 257 |
| HpyAV | CCTTC | 1 cut(s) | 39 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 2 cut(s) | 128, 348 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 48 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 226 |
| Hsp92II | CATG | 3 cut(s) | 128, 173, 235 |
| HspAI | GCGC | 1 cut(s) | 21 |
| Kpn2I | TCCGGA | 1 cut(s) | 210 |
| KpnI | GGTACC | 1 cut(s) | 177 |
| Ksp22I | TGATCA | 1 cut(s) | 253 |
| Kzo9I | GATC | 4 cut(s) | 159, 253, 333, 363 |
| LmnI | GCTCC | 1 cut(s) | 95 |
| LpnPI | CCDG | 5 cut(s) | 99, 224, 251, 319, 338 |
| MaeI | CTAG | 3 cut(s) | 15, 105, 194 |
| MalI | GATC | 4 cut(s) | 161, 255, 335, 365 |
| MbiI | CCGCTC | 1 cut(s) | 370 |
| MboI | GATC | 4 cut(s) | 159, 253, 333, 363 |
| MboII | GAAGA | 4 cut(s) | 267, 272, 275, 299 |
| MhlI | GDGCHC | 1 cut(s) | 306 |
| MlyI | GAGTC | 3 cut(s) | 191, 196, 266 |
| MmeI | TCCRAC | 1 cut(s) | 294 |
| MnlI | CCTC | 6 cut(s) | 36, 53, 63, 84, 216, 235 |
| MroI | TCCGGA | 1 cut(s) | 210 |
| MspA1I | CMGCKG | 1 cut(s) | 179 |
| MspI | CCGG | 3 cut(s) | 211, 238, 325 |
| MvnI | CGCG | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 48 |
| NdeII | GATC | 4 cut(s) | 159, 253, 333, 363 |
| NheI | GCTAGC | 1 cut(s) | 14 |
| NlaIII | CATG | 3 cut(s) | 128, 173, 235 |
| NlaIV | GGNNCC | 1 cut(s) | 175 |
| NspI | RCATGY | 1 cut(s) | 235 |
| PciI | ACATGT | 1 cut(s) | 231 |
| PfeI | GAWTC | 2 cut(s) | 70, 86 |
| PkrI | GCNGC | 1 cut(s) | 20 |
| PleI | GAGTC | 3 cut(s) | 191, 196, 266 |
| PpsI | GAGTC | 3 cut(s) | 191, 196, 266 |
| PscI | ACATGT | 1 cut(s) | 231 |
| PspN4I | GGNNCC | 1 cut(s) | 175 |
| PspPI | GGNCC | 1 cut(s) | 222 |
| RsaI | GTAC | 3 cut(s) | 133, 175, 236 |
| RsaNI | GTAC | 3 cut(s) | 132, 174, 235 |
| SatI | GCNGC | 1 cut(s) | 19 |
| Sau3AI | GATC | 4 cut(s) | 159, 253, 333, 363 |
| Sau96I | GGNCC | 1 cut(s) | 222 |
| SchI | GAGTC | 3 cut(s) | 191, 196, 266 |
| SduI | GDGCHC | 1 cut(s) | 306 |
| SetI | ASST | 3 cut(s) | 28, 100, 253 |
| SsiI | CCGC | 4 cut(s) | 19, 145, 177, 370 |
| SspMI | CTAG | 3 cut(s) | 15, 105, 194 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaqI | TCGA | 3 cut(s) | 200, 332, 366 |
| TatI | WGTACW | 1 cut(s) | 131 |
| TauI | GCSGC | 1 cut(s) | 21 |
| TfiI | GAWTC | 2 cut(s) | 70, 86 |
| TscAI | CASTG | 3 cut(s) | 68, 87, 118 |
| TspRI | CASTG | 3 cut(s) | 68, 87, 118 |
| XceI | RCATGY | 1 cut(s) | 235 |
| XspI | CTAG | 3 cut(s) | 15, 105, 194 |